mRNA_H-paniculata_contig861.16574.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig861.16574.1 vs. uniprot
Match: D7FTJ2_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ2_ECTSI) HSP 1 Score: 250 bits (639), Expect = 1.870e-80 Identity = 106/155 (68.39%), Postives = 128/155 (82.58%), Query Frame = 1
Query: 70 LLEDSCPGLCSGHGICLSMHDLALTPEALPLTNGSTLYGGIGSNETVAWDDDVMFACVCDSSWEVGLGAGQRQHPEYFGADCSLRRCPTGDDPMTSSDETNCEGVEAAGEFGIGQAENICHVDCSNRGKCNHGTGDCECYPGFYGDNCGKTTALA 534
+ DSCP CSGHG+CLSM +L T EALPL NGS +YG +GS+ETVAWD + M+ACVCDS+WEVGLG GQRQ EYFGADCS RRCPTGDDP+T+ D+T+CEG+ A G FG+GQA NICHVDCS RG+C+H TG+C C+ GF+G+NCGKTT L+
Sbjct: 29 VFADSCPSDCSGHGVCLSMFELGQTAEALPLMNGSHIYGDVGSDETVAWDFESMYACVCDSAWEVGLGPGQRQQAEYFGADCSQRRCPTGDDPLTAEDDTDCEGITAEGGFGLGQAGNICHVDCSGRGQCDHTTGECSCFDGFFGENCGKTTILS 183
BLAST of mRNA_H-paniculata_contig861.16574.1 vs. uniprot
Match: A0A7S2WUH0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUH0_9STRA) HSP 1 Score: 206 bits (525), Expect = 5.210e-60 Identity = 98/153 (64.05%), Postives = 110/153 (71.90%), Query Frame = 1
Query: 85 CPGLCSGHGICLSMHDLALTPEALPLT--NGSTLYGGIGSNETVAWDDDVMFACVCDSSWEVGLGAGQRQHPEYFGADCSLRRCPTGDDPMTSS-DETNCEGVEAAGEFGIGQAENICHVDCSNRGKCNHGTGDCECYPGFYGDNCGKTTALA 534
CP CSGHG CL+M +LA TPEALPL+ NGS +YG + T AWD D FACVCDSSWEVGLG+GQ Q PEYFG DCSLRRCP GDDP T DET+C A G G GQ N+CHVDCS RG CNHGTG C C+ G+YG NCG +A+A
Sbjct: 282 CPNDCSGHGRCLAMEELAATPEALPLSGSNGS-MYGSLDRRATKAWDFDKAFACVCDSSWEVGLGSGQVQGPEYFGPDCSLRRCPGGDDPRTPGVDETDCSNKSADGFRGRGQPGNLCHVDCSQRGICNHGTGTCACFEGYYGHNCGLVSAMA 433
BLAST of mRNA_H-paniculata_contig861.16574.1 vs. uniprot
Match: A0A2D4CFV3_PYTIN (EGF-like domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFV3_PYTIN) HSP 1 Score: 198 bits (504), Expect = 7.750e-59 Identity = 92/172 (53.49%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 43 ITARTGVKWLLEDS---------CPGLCSGHGICLSMHDLALTPEALPLTNGSTLYGGIGSNETVAWDDDVMFACVCDSSWEVGLGAGQRQHPEYFGADCSLRRCPTGDDPMTSSDETNCEGVEAAGEFGIGQAENICHVDCSNRGKCNHGTGDCECYPGFYGDNCGKTTAL 531
+TAR G +E + C CSGHG C+SM D+A ALPL++ +T+YGG+ S +T WD D MF CVCDS+W VGLG GQRQ E+FG DCSL RCP+GDDP+T+ DET+C G +A+G G+GQ N CHVDCSNRGKC++ TG C+C+ GFYG NC + +
Sbjct: 111 VTARRGSASAIEATRAARASAATCLNDCSGHGKCVSMRDMAAMTNALPLSD-ATIYGGLESTKT--WDQDRMFGCVCDSTWAVGLGTGQRQLAEWFGPDCSLMRCPSGDDPLTAVDETDCSGKQASGGIGVGQTGNKCHVDCSNRGKCDYSTGLCQCFDGFYGANCASLSPV 279
BLAST of mRNA_H-paniculata_contig861.16574.1 vs. uniprot
Match: A0A7S2H126_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H126_9STRA) HSP 1 Score: 191 bits (484), Expect = 7.760e-57 Identity = 87/160 (54.37%), Postives = 106/160 (66.25%), Query Frame = 1
Query: 76 EDSCPGLCSGHGICLSMHDLALTPEALPLTNGSTLYGGIGSNETVAWDDDVMFACVCDSSWEVGLGAGQRQHPEYFGADCSLRRCPTGDDPMTSSDETNCE--GVEAA-----GEFGIGQAENICHVDCSNRGKCNHGTGDCECYPGFYGDNCGKTTALA 534
SCP CSGHG CLSM LA A PL +G LY T WD+D+++ C+CDSSWEVGLGAGQR+ E+FG DCS+R CP+GDDP+TS DET+C G A GEFG G N+CHVDCSNRG C++ +G C C+ G YG+NCG + LA
Sbjct: 44 RKSCPNDCSGHGRCLSMKQLAQEVTAFPLIHGDKLYTYEEDETTTTWDEDMLYGCLCDSSWEVGLGAGQRRDAEWFGYDCSMRHCPSGDDPVTSVDETDCNDVGTNATRPNYYGEFGNGTTGNLCHVDCSNRGLCDYASGLCHCFTGHYGENCGSMSVLA 203
BLAST of mRNA_H-paniculata_contig861.16574.1 vs. uniprot
Match: D7FYV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV5_ECTSI) HSP 1 Score: 191 bits (486), Expect = 2.820e-56 Identity = 85/155 (54.84%), Postives = 111/155 (71.61%), Query Frame = 1
Query: 76 EDSCPGLCSGHGICLSMHDLALTPEALPLTNGSTLYGGIGSNETVAWDDDVMFACVCDSSWEVGLGAGQRQHPEYFGADCSLRRCPTGDDPMTSSDETNCEGVEAAGEF--GIGQAENICHVDCSNRGKCNHGTGDCECYPGFYGDNCGKTTALA 534
CP CS HG C++M LA+T +ALPL+N +T G ++TV WD++++F CVCDS WEVGLGAGQ Q PE+FG DCSLR CP+GDDP T DET+C V ++ + G+A N+CHVDCSNRG C++ TG CEC+ G+YG NCG+ + LA
Sbjct: 117 RSGCPDDCSDHGRCVNMKALAVTSDALPLSNVTTYSG---EDDTVTWDEEMIFGCVCDSKWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPSTDVDETDCFNVTSSSVYLGTAGRAGNLCHVDCSNRGTCDYATGLCECFTGYYGFNCGQQSVLA 268
BLAST of mRNA_H-paniculata_contig861.16574.1 vs. uniprot
Match: A0A7S1UJF5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJF5_9STRA) HSP 1 Score: 194 bits (493), Expect = 4.160e-55 Identity = 84/147 (57.14%), Postives = 104/147 (70.75%), Query Frame = 1
Query: 85 CPGLCSGHGICLSMHDLALTPEALPLTNGSTLYGGIGSNETVAWDDDVMFACVCDSSWEVGLGAGQRQHPEYFGADCSLRRCPTGDDPMTSSDETNCEGVEAAGEF---GIGQAENICHVDCSNRGKCNHGTGDCECYPGFYGDNCG 516
CP CSGHG+C++MH+L ALPL + S +YG + T AWD + ACVCDSSW VGL +G+ Q PE+FGADCSL+RCPTGDDPMTS+ ET+C GV G G + N+CHVDCSNRGKC+H G C C+ GF+G+NCG
Sbjct: 311 CPNDCSGHGLCMNMHELGGISRALPLVSSSQVYGSSANEATTAWDSLLNMACVCDSSWSVGLASGETQEPEWFGADCSLKRCPTGDDPMTSAVETDCSGVAPVGGSTTGATGASGNLCHVDCSNRGKCDHTLGTCTCFEGFHGENCG 457
BLAST of mRNA_H-paniculata_contig861.16574.1 vs. uniprot
Match: A0A2P4X7I9_9STRA (EGF-like domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7I9_9STRA) HSP 1 Score: 188 bits (477), Expect = 6.700e-55 Identity = 81/153 (52.94%), Postives = 104/153 (67.97%), Query Frame = 1
Query: 76 EDSCPGLCSGHGICLSMHDLALTPEALPLTNGSTLYGGIGSNETVAWDDDVMFACVCDSSWEVGLGAGQRQHPEYFGADCSLRRCPTGDDPMTSSDETNCEGVEAAGEFGIGQAENICHVDCSNRGKCNHGTGDCECYPGFYGDNCGKTTALA 534
SCP CSGHG CLSM ++A+ A PL+ + G + + WD D + C+CDSSW VGLGAG+ Q +YFG DCS CP+GDDPMT+ DET+CEG+ AAG G G A+N+CHVDC+NRG C++ G+C C+PGFYG NC + LA
Sbjct: 122 RSSCPNSCSGHGQCLSMREMAMESSAFPLSPPTKYEGDVTAT---TWDQDRIQGCLCDSSWPVGLGAGESQLAQYFGPDCSRMHCPSGDDPMTAVDETDCEGIIAAGGGGTGAADNLCHVDCANRGICDYSRGECSCFPGFYGSNCASLSPLA 271
BLAST of mRNA_H-paniculata_contig861.16574.1 vs. uniprot
Match: K3WVA2_GLOUD (EGF-like domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVA2_GLOUD) HSP 1 Score: 186 bits (473), Expect = 3.770e-54 Identity = 86/149 (57.72%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 85 CPGLCSGHGICLSMHDLALTPEALPLTNGSTLYGGIGSNETVAWDDDVMFACVCDSSWEVGLGAGQRQHPEYFGADCSLRRCPTGDDPMTSSDETNCEGVEAAGEFGIGQAENICHVDCSNRGKCNHGTGDCECYPGFYGDNCGKTTAL 531
CP CSGHG CLSM LA T A PL+ +T Y G + T WD + +F C+CDSSW VGL AGQRQ E+FGADCSL RCP+GDDPMT+ DET+C G AAG+ G G N CHVDC+NRGKC+ TG C C+ GFYG NC + +
Sbjct: 136 CPNGCSGHGQCLSMKALAPTTSAFPLS-AATTYSGAEATST--WDQNRIFGCLCDSSWSVGLAAGQRQLSEWFGADCSLMRCPSGDDPMTAVDETDCSGKVAAGDVGTGATGNKCHVDCANRGKCDFTTGTCTCFDGFYGSNCASLSPV 281
BLAST of mRNA_H-paniculata_contig861.16574.1 vs. uniprot
Match: W2Q018_PHYPN (EGF-like domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2Q018_PHYPN) HSP 1 Score: 186 bits (471), Expect = 5.970e-54 Identity = 81/152 (53.29%), Postives = 101/152 (66.45%), Query Frame = 1
Query: 76 EDSCPGLCSGHGICLSMHDLALTPEALPLTNGSTLYGGIGSNETVAWDDDVMFACVCDSSWEVGLGAGQRQHPEYFGADCSLRRCPTGDDPMTSSDETNCEGVEAAGEFGIGQAENICHVDCSNRGKCNHGTGDCECYPGFYGDNCGKTTAL 531
SCP CSGHG CLSM +LA P A PL+ + G + + WD D + C+CDSSW VGLGAG+ Q +YFG DCS CP+GDDPMT+ DET+CEGV A G G G +N+CHVDC+NRG CN+ +G+C C+ GFYG NC + L
Sbjct: 126 RSSCPNSCSGHGQCLSMRELAAAPSAFPLSPPTKYEGDVTAT---TWDQDRIQGCLCDSSWPVGLGAGESQLSQYFGPDCSRMHCPSGDDPMTAVDETDCEGVVADGGGGTGAPDNLCHVDCANRGICNYNSGECSCFSGFYGSNCASLSPL 274
BLAST of mRNA_H-paniculata_contig861.16574.1 vs. uniprot
Match: D0N4R0_PHYIT (EGF-like domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N4R0_PHYIT) HSP 1 Score: 181 bits (458), Expect = 1.230e-53 Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 1
Query: 82 SCPGLCSGHGICLSMHDLALTPEALPLTNGSTLYGGIGSNETVAWDDDVMFACVCDSSWEVGLGAGQRQHPEYFGADCSLRRCPTGDDPMTSSDETNCEGVEAAGEFGIGQAENICHVDCSNRGKCNHGTGDCECYPGFYGDNCGKTTAL 531
SCP CSGHG C+SM +LA+ P A PL+ + G + WD D + C+CDS+W VGLGAG+ Q +YFG DCS CP+GDDPMT+ DET C G+ A G G G +N+CHVDC+NRG C++ TG+C C+ GFYG NC + L
Sbjct: 5 SCPNSCSGHGQCMSMRELAVEPSAFPLSPPTKYEGDV---RATTWDQDRIQGCLCDSTWPVGLGAGESQLSQYFGPDCSKMHCPSGDDPMTAVDETKCVGIVATGGAGTGGPDNLCHVDCANRGICDYNTGECSCFSGFYGSNCASLSPL 151 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig861.16574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig861.16574.1 >prot_H-paniculata_contig861.16574.1 ID=prot_H-paniculata_contig861.16574.1|Name=mRNA_H-paniculata_contig861.16574.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp MHDLALTPEALPLTNGSTLYGGIGSNETVAWDDDVMFACVCDSSWEVGLGback to top mRNA from alignment at H-paniculata_contig861:26995..30013+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig861.16574.1 ID=mRNA_H-paniculata_contig861.16574.1|Name=mRNA_H-paniculata_contig861.16574.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3019bp|location=Sequence derived from alignment at H-paniculata_contig861:26995..30013+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig861:26995..30013+ >mRNA_H-paniculata_contig861.16574.1 ID=mRNA_H-paniculata_contig861.16574.1|Name=mRNA_H-paniculata_contig861.16574.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at H-paniculata_contig861:26995..30013+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |