mRNA_H-paniculata_contig8581.16546.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8581.16546.1 vs. uniprot
Match: A0A6H5JZ77_9PHAE (Glyco_hydro_114 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ77_9PHAE) HSP 1 Score: 172 bits (435), Expect = 4.060e-50 Identity = 78/107 (72.90%), Postives = 88/107 (82.24%), Query Frame = 1
Query: 25 WNYNLNTPVDTSIDVNVFFIDMDGAQETIDTIHGMGKVAVCYISIGTVEEWRDDASQFPSTAVGGDVDGWAGERWLDVKDKTVRSIMTERVEKAARMNCDAVEPDNM 345
WNYNL TPVDTS DV+VFFIDMD Q ID +H GK VCYISIGTVE+WRDDA +FPS+A+GGDV GWAGE+W+DV D+ VR IMT RVE A+ MNCDAVEPDNM
Sbjct: 151 WNYNLRTPVDTSADVDVFFIDMDAGQGVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNM 257
BLAST of mRNA_H-paniculata_contig8581.16546.1 vs. uniprot
Match: D7FRL2_ECTSI (Endo alpha-1,4 polygalactosaminidase precusor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL2_ECTSI) HSP 1 Score: 172 bits (436), Expect = 1.450e-47 Identity = 76/115 (66.09%), Postives = 89/115 (77.39%), Query Frame = 1
Query: 1 WIPKIGDHWNYNLNTPVDTSIDVNVFFIDMDGAQETIDTIHGMGKVAVCYISIGTVEEWRDDASQFPSTAVGGDVDGWAGERWLDVKDKTVRSIMTERVEKAARMNCDAVEPDNM 345
W+PK+GD WNYNLNTPVDT VFFIDMD AQ+TID +HG GK CYIS+GTVE WR+DA FPS+AVG D W GE +LD+ ++VR +M RVEKAARMNCDA+EPDNM
Sbjct: 820 WVPKVGDTWNYNLNTPVDTXXXXXVFFIDMDNAQDTIDELHGKGKYVSCYISVGTVESWREDAGAFPSSAVGNSWDDWQGENFLDITQQSVRDLMEARVEKAARMNCDAIEPDNM 934
BLAST of mRNA_H-paniculata_contig8581.16546.1 vs. uniprot
Match: A0A534PN76_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534PN76_9DELT) HSP 1 Score: 135 bits (339), Expect = 5.630e-37 Identity = 62/116 (53.45%), Postives = 79/116 (68.10%), Query Frame = 1
Query: 1 WIPKIGDHWNYNLNTPVDTSIDVNVFFIDM-DGAQETIDTIHGMGKVAVCYISIGTVEEWRDDASQFPSTAVGGDVDGWAGERWLDVKDKTVRSIMTERVEKAARMNCDAVEPDNM 345
W P G W + L+ DT++D +F ID+ D Q T+DT+HG G+V VCY+S GT E WR DAS+FPS A+G V GWAGE WLD +D TVRSIM R++ A + CD VEPDN+
Sbjct: 41 WHPASGTTWQWQLSGATDTTVDAAMFDIDLFDAPQSTLDTLHGKGRVVVCYLSAGTYENWRPDASRFPSGALGNPVAGWAGEWWLDTRDATVRSIMKARMDLAVQKKCDGVEPDNV 156
BLAST of mRNA_H-paniculata_contig8581.16546.1 vs. uniprot
Match: A0A3G9GXE8_9PROT (Endo alpha-1,4 polygalactosaminidase precusor n=1 Tax=Hydrogenimonas sp. TaxID=2231112 RepID=A0A3G9GXE8_9PROT) HSP 1 Score: 122 bits (307), Expect = 4.600e-32 Identity = 54/113 (47.79%), Postives = 77/113 (68.14%), Query Frame = 1
Query: 10 KIGDHWNYNLNTPVDTSIDVNVFFIDM-DGAQETIDTIHGMGKVAVCYISIGTVEEWRDDASQFPSTAVGGDVDGWAGERWLDVKDKTVRSIMTERVEKAARMNCDAVEPDNM 345
K W L +++ DV+++ ID+ D QETI+ +HG G+ +CY S G+ EEWR+D +FP A+G D+DGW GERWLD+++KTV +IM ER+E A R CD V+PDN+
Sbjct: 43 KSSTTWQLQLQGTINSDYDVDLYDIDLFDTPQETIEKLHGEGRTVICYFSAGSYEEWREDNGRFPKEALGKDLDGWEGERWLDIRNKTVWNIMEERIELAKRRGCDGVDPDNV 155
BLAST of mRNA_H-paniculata_contig8581.16546.1 vs. uniprot
Match: A0A2S9Y4F7_9DELT (Glyco_hydro_114 domain-containing protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9Y4F7_9DELT) HSP 1 Score: 121 bits (304), Expect = 4.350e-31 Identity = 54/116 (46.55%), Postives = 75/116 (64.66%), Query Frame = 1
Query: 1 WIPKIGDHWNYNLNTPVDTSIDVNVFFIDM-DGAQETIDTIHGMGKVAVCYISIGTVEEWRDDASQFPSTAVGGDVDGWAGERWLDVKDKTVRSIMTERVEKAARMNCDAVEPDNM 345
W P G W + L+ +DT+ DV V+ ID+ D TI ++H G+ +CY S G+ E+WR DA QFP A+G +DGW GERWLD++D VR++M R++ A CDAVEPDN+
Sbjct: 102 WCPTPGTSWQWQLSGNLDTTFDVEVYDIDLFDTPPATIASLHDDGRAVICYFSAGSHEDWRPDADQFPPAAIGDPLDGWPGERWLDIRDAEVRALMQARLDLAQSAGCDAVEPDNV 217
BLAST of mRNA_H-paniculata_contig8581.16546.1 vs. uniprot
Match: A0A7V4LGC7_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4LGC7_9DELT) HSP 1 Score: 121 bits (303), Expect = 5.470e-31 Identity = 53/116 (45.69%), Postives = 73/116 (62.93%), Query Frame = 1
Query: 1 WIPKIGDHWNYNLNTPVDTSIDVNVFFIDM-DGAQETIDTIHGMGKVAVCYISIGTVEEWRDDASQFPSTAVGGDVDGWAGERWLDVKDKTVRSIMTERVEKAARMNCDAVEPDNM 345
W P G W + L+ P+D S+DV+++ ID+ D Q ID + G +CY S G+ E+WR+DA FP AVG +DGW GERWLD++ VR IM R+++A CD VEPDN+
Sbjct: 100 WRPAPGTRWQWQLSGPIDDSLDVDMYDIDLFDAPQAVIDGLRARGVAVICYFSAGSREDWREDAGDFPPAAVGEPLDGWPGERWLDIRSPDVRRIMQARLDRAVARRCDGVEPDNV 215
BLAST of mRNA_H-paniculata_contig8581.16546.1 vs. uniprot
Match: UPI001656DE63 (endo alpha-1,4 polygalactosaminidase n=1 Tax=Nitrosophilus labii TaxID=2706014 RepID=UPI001656DE63) HSP 1 Score: 119 bits (299), Expect = 5.870e-31 Identity = 50/114 (43.86%), Postives = 76/114 (66.67%), Query Frame = 1
Query: 7 PKIGDHWNYNLNTPVDTSIDVNVFFIDM-DGAQETIDTIHGMGKVAVCYISIGTVEEWRDDASQFPSTAVGGDVDGWAGERWLDVKDKTVRSIMTERVEKAARMNCDAVEPDNM 345
P + W++ L ++ +V ++ ID+ D ++E I+T+H GK +CY S G+ E WR+DA +FP A+G D+DGW GE+WLD+++ TVR IM ER++ A CD VEPDN+
Sbjct: 33 PDVNTTWHWQLQGTINLDYNVELYDIDLFDTSEEIIETLHNQGKKVICYFSAGSYENWREDAYKFPKEAIGNDLDGWEGEKWLDIRNSTVREIMQERLDIAKNKGCDGVEPDNV 146
BLAST of mRNA_H-paniculata_contig8581.16546.1 vs. uniprot
Match: A0A7X9IZM4_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X9IZM4_9DELT) HSP 1 Score: 119 bits (298), Expect = 3.100e-30 Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 1 WIPKIGDHWNYNLNTPVDTSIDVNVFFIDM-DGAQETIDTIHGMGKVAVCYISIGTVEEWRDDASQFPSTAVGGDVDGWAGERWLDVKDKTVRSIMTERVEKAARMNCDAVEPDNM 345
W P G W + L +D S+DV ++ ID+ + Q ID + G V +CY S G+ EEWR+DA FP+ AVG +DGW GERWLD++ VR IM R+++A CD VEPDN+
Sbjct: 102 WRPAPGTRWQWQLTGTIDDSLDVEMYDIDLFEAPQAVIDGLRARGVVVICYFSAGSREEWREDAGDFPAAAVGEPLDGWPGERWLDIRSPDVRRIMQARLDRAVARRCDGVEPDNV 217
BLAST of mRNA_H-paniculata_contig8581.16546.1 vs. uniprot
Match: A0A836UAD2_9BACT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Candidatus Handelsmanbacteria bacterium TaxID=2099671 RepID=A0A836UAD2_9BACT) HSP 1 Score: 117 bits (293), Expect = 3.940e-30 Identity = 54/116 (46.55%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 1 WIPKIGDHWNYNLNTPVDTSIDVNVFFIDM-DGAQETIDTIHGMGKVAVCYISIGTVEEWRDDASQFPSTAVGGDVDGWAGERWLDVKDKTVRSIMTERVEKAARMNCDAVEPDNM 345
W P++ W + L V+ DV V+ ID+ D Q TID +H +G+ +CY S G+ EEWRDDA FP +G +DGW GERWLD++ +VR IM R++ A CD VEPDNM
Sbjct: 27 WKPEVTTTWQWQLLGDVNIEYDVAVYDIDLFDVPQTTIDQLHTVGRKVMCYFSGGSFEEWRDDAGDFPKVVLGKGLDGWEGERWLDIRSASVRQIMATRLDLAVSRQCDGVEPDNM 142
BLAST of mRNA_H-paniculata_contig8581.16546.1 vs. uniprot
Match: A0A1F3BM53_9DELT (Endo alpha-1,4 polygalactosaminidase (Fragment) n=1 Tax=Anaeromyxobacter sp. RBG_16_69_14 TaxID=1797238 RepID=A0A1F3BM53_9DELT) HSP 1 Score: 117 bits (292), Expect = 4.030e-30 Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = 1
Query: 1 WIPKIGDHWNYNLNTPVDTSIDVNVFFIDM-DGAQETIDTIHGMGKVAVCYISIGTVEEWRDDASQFPSTAVGGDVDGWAGERWLDVKDKTVRSIMTERVEKAARMNCDAVEPDNM 345
W P G W + L +DT +DV + ID+ D + TI T+ GK +CY S G+ E WR D FP+ A+G ++DGW GERWLD + ++VR+IM R++ AA C+AVEPDN+
Sbjct: 16 WQPAPGTSWQWQLTGSLDTGLDVEAYDIDLFDNSAGTIATLKAAGKKVICYFSAGSYENWRPDKGSFPAAALGNNLDGWPGERWLDTRSQSVRNIMAARMDLAASKGCNAVEPDNV 131 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8581.16546.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8581.16546.1 >prot_H-paniculata_contig8581.16546.1 ID=prot_H-paniculata_contig8581.16546.1|Name=mRNA_H-paniculata_contig8581.16546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp WIPKIGDHWNYNLNTPVDTSIDVNVFFIDMDGAQETIDTIHGMGKVAVCYback to top mRNA from alignment at H-paniculata_contig8581:8589..9884+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8581.16546.1 ID=mRNA_H-paniculata_contig8581.16546.1|Name=mRNA_H-paniculata_contig8581.16546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1296bp|location=Sequence derived from alignment at H-paniculata_contig8581:8589..9884+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8581:8589..9884+ >mRNA_H-paniculata_contig8581.16546.1 ID=mRNA_H-paniculata_contig8581.16546.1|Name=mRNA_H-paniculata_contig8581.16546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at H-paniculata_contig8581:8589..9884+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |