mRNA_H-paniculata_contig8568.16536.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8568.16536.1 vs. uniprot
Match: D7G8K2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K2_ECTSI) HSP 1 Score: 154 bits (389), Expect = 1.580e-41 Identity = 94/155 (60.65%), Postives = 122/155 (78.71%), Query Frame = 1
Query: 1 IDASERRRKVEKERVAAIKAENAKQRELRAQKQRESDDADAQLLLEHRRRADEEERKRAEKLRERMKMYEDIGNFWSERGVGREEADMAKREEQQTSAAARRQAYSEAELERERYEKEKKRLASIRMAIENKRVIEQRNALADKRQKEEMAYAQR 465
+D ++R+RK EK+R+AAI+AENAKQRE+R Q+QRESD ADA LL EHR+R D EE+ RA KL++RMK YEDIGNFWSER G EA++ RE QQT AARR+ EA LERER E+E +R+A + MA EN++VI+++NAL K+ KE+M +AQR
Sbjct: 186 VDEADRKRKSEKDRLAAIQAENAKQREIREQRQRESDAADALLLKEHRQRMDAEEQARAAKLKQRMKRYEDIGNFWSERQAGNTEAEVELREAQQTLKAARRK--EEATLERERKEREARRIAGMVMAAENQKVIQEKNALNAKKHKEDMEFAQR 338
BLAST of mRNA_H-paniculata_contig8568.16536.1 vs. uniprot
Match: A0A836CRB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRB1_9STRA) HSP 1 Score: 110 bits (275), Expect = 7.890e-24 Identity = 80/198 (40.40%), Postives = 120/198 (60.61%), Query Frame = 1
Query: 112 DADAQLLLEHRRRADEEERKRAEKLRERMKMYEDIGNFWSERGVGREEADMAKREEQ--QTSAAARRQAYSEAELERERYEKEKKRLASIRMAIENKRVIEQRNALADKRQKEEMAYAQRFINDSEAFKQEEREKILNKKEAMQRYRKQLEKQVQETKARCMHEDMNETEFRLNSDLVKRLEADKHMFAQVKLRMESA 699
D DA+L+ E+R R D EE +RA KL+ERM+ YE IG +W + G RE+A R E Q AAR + AE ERER + EK+R+ + A++N+R +++RN +++ + E A+ D+EAFKQ E+E+I K+ AM +YR +L+K M ETE LNSD+VKR++AD + +V+ R+ +A
Sbjct: 567 DEDARLMEEYRLRLDREEAERARKLKERMQKYEKIGAYWQDSGNVREQAAELDRLEANIQEEFAAR----AHAESERERRDWEKRRIGCMAAALDNRRTVQERNRRSEEEAERERQLAETARADAEAFKQAEKERIEKKRLAMTKYRAELDKXXXXXXXXXXXXXMTETEALLNSDIVKRIQADARLQQRVRERLGAA 760
BLAST of mRNA_H-paniculata_contig8568.16536.1 vs. uniprot
Match: A0A7S1TW05_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TW05_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 5.210e-12 Identity = 57/229 (24.89%), Postives = 125/229 (54.59%), Query Frame = 1
Query: 4 DASERRRKVEKERVAAIKAENAKQRELRAQKQRESDDADAQLLLEHRRRADEEERKRAEKLRERMKMYEDIGNFWSERGVGREEADMAKREEQQTSAAARRQAYSEAELERERYEKEKKRLASIRMAIENKRVIEQRNALADKRQKEEMAYAQRFINDSEAFKQEEREKILNKKEAMQRYRKQLEKQVQETKARCMHEDMNETEFRLNSDLVKRLEADKHMFAQVKLRM 690
D R+R+ E ER+ I EN + RA+ +E D +L+ E++ + + E+ +R +RM+ YE G W+++G G+++ + R E+ A+++ +A++ERER +KE R ++ +A NK ++E++ + M YA F + E + ER + ++E +++ L++Q++ + R +M++ E +N +++++++ D M ++++ R+
Sbjct: 365 DEEARKRREEHERLKKILIENQIENAKRAEVAKEEAAEDVRLMEEYKAKLEREDLERKRAFEKRMERYEAYGRLWADKGAGKKQREEELRIERVILREAKKK--EDADIERERRDKEYLRTTALSIAASNKNLMEEKRRRMKEEHDASMIYAMSFRGEGEQYVAAERARAAARREEAKKHAAFLKEQIEGDRQRRQAVEMSDAERSVNREVLRKVKEDPEMVSRIQARL 591
BLAST of mRNA_H-paniculata_contig8568.16536.1 vs. uniprot
Match: A0A7S1TWB0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWB0_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.020e-11 Identity = 54/220 (24.55%), Postives = 121/220 (55.00%), Query Frame = 1
Query: 31 EKERVAAIKAENAKQRELRAQKQRESDDADAQLLLEHRRRADEEERKRAEKLRERMKMYEDIGNFWSERGVGREEADMAKREEQQTSAAARRQAYSEAELERERYEKEKKRLASIRMAIENKRVIEQRNALADKRQKEEMAYAQRFINDSEAFKQEEREKILNKKEAMQRYRKQLEKQVQETKARCMHEDMNETEFRLNSDLVKRLEADKHMFAQVKLRM 690
E+ER+ I EN + RA+ +E D +L+ E++ + + E+ +R +RM+ YE G W+++G G+++ + R E+ A+++ +A++ERER +KE R ++ +A NK ++E++ + M YA F + E + ER + ++E +++ L++Q++ + R +M++ E +N +++++++ D M ++++ R+
Sbjct: 19 ERERLKKILIENQIENAKRAEVAKEEAAEDVRLMEEYKAKLEREDLERKRAFEKRMERYEAYGRLWADKGAGKKQREEELRIERVILREAKKK--EDADIERERRDKEYLRTTALSIAASNKNLMEEKRRRMKEEHDASMIYAMSFRGEGEQYVAAERARAAARREEAKKHAAFLKEQIEGDRQRRQAVEMSDAERSVNREVLRKVKEDPEMVSRIQARL 236
BLAST of mRNA_H-paniculata_contig8568.16536.1 vs. uniprot
Match: A0A7S2WFB5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFB5_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 2.160e-11 Identity = 61/226 (26.99%), Postives = 123/226 (54.42%), Query Frame = 1
Query: 31 EKERVAAIKAENAKQRELRAQKQRESDDADAQLLLEHRRRADEEERKRAEKLRERMKMYEDIGNFWSERGVGREEADMAKREEQQTSAAARRQAYSEAELERERYEKEKKRLASIRMAIENKRVIEQRNALADKRQKEEMAYAQRFINDSEAFKQEEREKILNKKEAMQRYRKQLEKQVQETKARC---MHEDMNETEFRLNSDLVKRLEADKHMFAQVKLRMESA 699
E ER+ +K +N K+R++R Q++++ D +L+ ++ + + EE +RA RM+ + G W+E G G+E+ + ++ EQQ A R+ +A+LERER +K+ + MA N+++IE + ++Q+E+ ++A++ D + F + E K K M +++ L +Q+ M M++ E ++N +L+K+L + + +V R+ +A
Sbjct: 282 EAERMRQVKLDNLKERQIRMQRKQQEALEDQRLMEAYKAKLEREEVERANAFERRMERLQASGQKWAEEGAGKEQLEFEQKLEQQILGEALRK--EQADLERERRDKQAIKDKQRLMAESNRKLIEAKKLRMQRKQQEDQSFAEKSQRDQKEFFESEARKKKEKALLMNQHQIALSQQIHHRSNNPTDPMKASMSDHERKINGELLKKLHQEPELLLKVANRVHAA 505 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8568.16536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8568.16536.1 >prot_H-paniculata_contig8568.16536.1 ID=prot_H-paniculata_contig8568.16536.1|Name=mRNA_H-paniculata_contig8568.16536.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=170bp MKMYEDIGNFWSERGVGREEADMAKREEQQTSAAARRQAYSEAELERERYback to top mRNA from alignment at H-paniculata_contig8568:321..5986+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8568.16536.1 ID=mRNA_H-paniculata_contig8568.16536.1|Name=mRNA_H-paniculata_contig8568.16536.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5666bp|location=Sequence derived from alignment at H-paniculata_contig8568:321..5986+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8568:321..5986+ >mRNA_H-paniculata_contig8568.16536.1 ID=mRNA_H-paniculata_contig8568.16536.1|Name=mRNA_H-paniculata_contig8568.16536.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1020bp|location=Sequence derived from alignment at H-paniculata_contig8568:321..5986+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |