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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 896 |
| Cds size | 894 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8557.16530.1 >prot_H-paniculata_contig8557.16530.1 ID=prot_H-paniculata_contig8557.16530.1|Name=mRNA_H-paniculata_contig8557.16530.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp
MVPFLLFLLRDLRHVLLYLSNDTGSTSSPFHRAGIDRQSPLARPGNINYP
QLSDTGETVLTMSGGCFTAVVAVLCVIQARPGSSFTHIPAVSHTTTQPIA
RFSTSFSSTSAAVPATNGVAPVPSAGISMLQGKPWFIGGVGATGSRTGAW
ELCARYDTVETAMAAARAAGGKGKGNDDDNDIDDKDEDKAKDKPNKREEE
EASAPQTATKKQVKKLVDVTDVADVTEPAKISTTSSTSMGGWKWNFGTSK
SKAATPPTPKSSKPAAPSEPVAAEKGEIKTREERVTEPETAAIEKVH* back to topmRNA from alignment at H-paniculata_contig8557:1567..4356+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig8557.16530.1 ID=mRNA_H-paniculata_contig8557.16530.1|Name=mRNA_H-paniculata_contig8557.16530.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2790bp|location=Sequence derived from alignment at H-paniculata_contig8557:1567..4356+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATATGGTGCCCTTTCTGTTGTTCCTGTTGCGGGATCTACGACATGTACTC
TTATATCTGTCAAATGATACGGGTTCAACATCTTCACCGTTTCACAGAGC
AGGTATAGACCGCCAAAGCCCCCTGGCCAGGCCGGGGAATATAAATTACC
CGCAACTGAGTGATACTGGAGAAACGGTGCTTACGATGTCTGGGGGATGC
TTTACAGCCGTGGTCGCGGTCCTGTGTGTGATCCAGGTGTGGTGAATGAA
ACGGCAATTACAACAAGAACAAGTGTAACGGCGGTACAACTATGGAGAGA
GCAGTGCACACATACATGCTCTGTGTAACGGTCTCTTGCGGCTGCCGTAT
GTACCTAGTCGAATTAATCAGTACATATCGCTGTCCGGGATGAATTCAGC
ACGAGTTTCTCTCTTCTGCTGTGTACATAGTACTTGTGAAGAACCCGCCC
ATCATGTGTATGTTTTCTTCGTTGCGAAGGTATAAATGCACATACATGTC
GCTCTCCAACAGAATATTTACAGATATGCAACTCTATAATAGTACCGTCA
GTACACGTTGGCTGACTTGAATGTGATAGTGATGTAATTCTGAAGGCTGA
TCATCATGCCTGTTGTACTTGCCTGTCGCGTCCCTTCTCAGCCAGTGTTG
TGAGCTTTAGGTTTTCGACACAGAACAGATAGTGTTTGTCGTTACAAAGG
AGGAAGGGCTATTTCACCGGCGGACGCTGTGTCTATATCGAATTGGGCGT
GAGTAATCTCGGATACTCGTGCAGGAGTACAGAGGGCACAGGGGGACGAA
TAAGCCCAAAAGATCGAAGAGAAGCTCTTGGGCTATAGCAACTGCCCCCT
GTTATTTATTATTAGAGTGTCAGTTCGCCGATAGAGCACTGATGGACTCC
ATTTCTATCTTACCAGACCTGCCGCCCATATCATGAAATGCTCGTGAATT
GCCCATGCTCTTCAAATACTGAAGTGGTTTAGTATCAATGGAAATCTTTT
TAATCTAGGGTAAACTGTGCGACTTTAAGCATGATCGGTCACCTGACAGG
CTACATACAGACTACTAGGGTAGGTGCATTTCCTGTGAGCTAAAGGGCTG
AACTGGCTTGGCTGCCGTGCTGTATTTTTGCAGTCGGGCTCTAGACACTC
ATCGCAGGGTGAAATCCAAGCAACTAGGCCAAACGGTCATGTTGATTAGT
ACTACTTCTTGACACTAGAATGTAGTAAAACTACCATAGTACATACAAGT
ACAATTTTTATCCATTTTCCCATTGCTCATTTAACCATAGGCCCGACCAG
GATCAAGCTTCACACACATACCAGCCGTGTCACACACGACAACCCAACCC
ATCGCGAGGTTCTCCACAAGCTTCAGCAGCACTAGTGCCGCTGTTCCTGC
TACCAACGGCGTTGCTCCTGTACCTAGTGCTGGTATAAGTATGCTGCAAG
GGAAGCCCTGGTTCATTGGAGGTGTTGGTGCTACTGGGAGCCGAACGGGG
GCATGGGAGCTGTGTGCCCGATACGATACGGTGGAGACTGCCATGGCAGC
TGCAAGGGCTGCTGGGGGCAAGGGCAAGGGAAATGATGATGATAATGACA
TTGATGATAAGGACGAAGACAAAGCCAAAGACAAACCCAACAAGAGAGAA
GAGGAGGTGAGACCAAGTGAGAGAGTTTGAAATACTAAAATAAATGCAAA
TGCAAATGTCTGCTGTACGGTACAGTACAGTGTAGATGTTTGCCTCACCC
TTCTCCAGTTCCGAGTATACAACACGTATTTAGTCTATGGCGCTGCCGTC
TCAATACCTTCACCTTCACTTTCCACTCTATTACTCTACTCTTCAACAAA
ATAAATGAGGGTTCTGAAATGATTTTATTATTACTGTTATTATTTTGTTT
AATACTCCAACGGTATCTCAAGTCGTGTACAGGTGTATACGCACTCCCGA
CTACAGAACTAGAGATACCGGATGGTCCGTAGTGAGTAGTAGCCATTAGA
AAGGTGAGGAGAATGACATGAAACCCCGTTTCAAACTGATCTCAGTTTAC
GATATCGAAATAAAAAGATGGAACAGAACACATCCAGTTTACGTCTGATG
AATTGCAATTGTGTTGAAGCATGGCAGATTCGTGCTGTTGCATCATTCAA
TATTTTCGTATTTCAGAAGACTTTTTTTTATCCTTGACGGAGAGGAGGAA
ACCTTTGCCCAACACTTACCCCGAGATCGGGTTTGGGCTCGTGTCTCGGT
TACCCGAAGGCCCGACTAGACCGCCGTGAGGCAGTCATGTGGGGTAGGCA
CCCCGAAGGTTCGTATGACTTTGCTGAGGGTAGTGTCGGACTCACACCCA
CTAAAACCCTCTATGTTGATTTCCTCAACTTGGTGCAGTACACGCACCGC
CCTGCTCAACGAGCTTCGGCCCTAGATTTTCGAAGAGTGCATTCTGAAGG
ATACGTTTCCCAATCTTGCGCGTGTCCCCACCGCTCTTGTCGCTAGGAGG
CCTCAGCCCCTCAAACCGCAACGAAGAAACAGGTCAAGAAGCTCGTTGAT
GTAACTGATGTAGCTGATGTAACCGAGCCTGCAAAGATCAGCACTACCTC
GAGCACCAGCATGGGTGGATGGAAGTGGAATTTTGGGACTAGCAAGAGCA
AGGCAGCAACCCCACCTACGCCCAAGTCTTCTAAACCTGCGGCGCCTTCT
GAGCCTGTCGCCGCTGAAAAAGGAGAGATTAAAACGCGCGAGGAAAGAGT
GACAGAACCGGAAACCGCTGCTATCGAGAAGGTGCATTAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig8557:1567..4356+ >mRNA_H-paniculata_contig8557.16530.1 ID=mRNA_H-paniculata_contig8557.16530.1|Name=mRNA_H-paniculata_contig8557.16530.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1788bp|location=Sequence derived from alignment at H-paniculata_contig8557:1567..4356+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGCCCTTTCTGTTGTTCCTGTTGCGGGATCTACGACATGTACTCTT
ATATCTGTCAAATGATACGGGTTCAACATCTTCACCGTTTCACAGAGCAG
GTATAGACCGCCAAAGCCCCCTGGCCAGGCCGGGGAATATAAATTACCCG
CAACTGAGTGATACTGGAGAAACGGTGCTTACGATGTCTGGGGGATGCTT
TACAGCCGTGGTCGCGGTCCTGTGTGTGATCCAGATGGTGCCCTTTCTGT
TGTTCCTGTTGCGGGATCTACGACATGTACTCTTATATCTGTCAAATGAT
ACGGGTTCAACATCTTCACCGTTTCACAGAGCAGGTATAGACCGCCAAAG
CCCCCTGGCCAGGCCGGGGAATATAAATTACCCGCAACTGAGTGATACTG
GAGAAACGGTGCTTACGATGTCTGGGGGATGCTTTACAGCCGTGGTCGCG
GTCCTGTGTGTGATCCAGGCCCGACCAGGATCAAGCTTCACACACATACC
AGCCGTGTCACACACGACAACCCAACCCATCGCGAGGTTCTCCACAAGCT
TCAGCAGCACTAGTGCCGCTGTTCCTGCTACCAACGGCGTTGCTCCTGTA
CCTAGTGCTGGTATAAGTATGCTGCAAGGGAAGCCCTGGTTCATTGGAGG
TGTTGGTGCTACTGGGAGCCGAACGGGGGCATGGGAGCTGTGTGCCCGAT
ACGATACGGTGGAGACTGCCATGGCAGCTGCAAGGGCTGCTGGGGGCAAG
GGCAAGGGAAATGATGATGATAATGACATTGATGATAAGGACGAAGACAA
AGCCAAAGACAAACCCAACAAGAGAGAAGAGGAGGCCCGACCAGGATCAA
GCTTCACACACATACCAGCCGTGTCACACACGACAACCCAACCCATCGCG
AGGTTCTCCACAAGCTTCAGCAGCACTAGTGCCGCTGTTCCTGCTACCAA
CGGCGTTGCTCCTGTACCTAGTGCTGGTATAAGTATGCTGCAAGGGAAGC
CCTGGTTCATTGGAGGTGTTGGTGCTACTGGGAGCCGAACGGGGGCATGG
GAGCTGTGTGCCCGATACGATACGGTGGAGACTGCCATGGCAGCTGCAAG
GGCTGCTGGGGGCAAGGGCAAGGGAAATGATGATGATAATGACATTGATG
ATAAGGACGAAGACAAAGCCAAAGACAAACCCAACAAGAGAGAAGAGGAG
GAGGCCTCAGCCCCTCAAACCGCAACGAAGAAACAGGTCAAGAAGCTCGT
TGATGTAACTGATGTAGCTGATGTAACCGAGCCTGCAAAGATCAGCACTA
CCTCGAGCACCAGCATGGGTGGATGGAAGTGGAATTTTGGGACTAGCAAG
AGCAAGGCAGCAACCCCACCTACGCCCAAGTCTTCTAAACCTGCGGCGCC
TTCTGAGCCTGTCGCCGCTGAAAAAGGAGAGATTAAAACGCGCGAGGAAA
GAGTGACAGAACCGGAAACCGCTGCTATCGAGAAGGTGCATTAAGAGGCC
TCAGCCCCTCAAACCGCAACGAAGAAACAGGTCAAGAAGCTCGTTGATGT
AACTGATGTAGCTGATGTAACCGAGCCTGCAAAGATCAGCACTACCTCGA
GCACCAGCATGGGTGGATGGAAGTGGAATTTTGGGACTAGCAAGAGCAAG
GCAGCAACCCCACCTACGCCCAAGTCTTCTAAACCTGCGGCGCCTTCTGA
GCCTGTCGCCGCTGAAAAAGGAGAGATTAAAACGCGCGAGGAAAGAGTGA
CAGAACCGGAAACCGCTGCTATCGAGAAGGTGCATTAA back to top
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