mRNA_H-paniculata_contig8555.16529.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8555.16529.1 vs. uniprot
Match: A0A7S0E301_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E301_9CRYP) HSP 1 Score: 88.6 bits (218), Expect = 1.300e-20 Identity = 41/57 (71.93%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 13 GFHKVVGGKALRLFRPEELELLICGNPQLDFLALERNSKYEDGYKRDTPVIKNFWEV 183
GFH+V GG ALR+F PEELELLICGNP LDF ALE + EDGY RD PVI NFW V
Sbjct: 38 GFHEVCGGPALRMFIPEELELLICGNPNLDFHALEEVTSTEDGYTRDHPVILNFWTV 94
BLAST of mRNA_H-paniculata_contig8555.16529.1 vs. uniprot
Match: A0A7S1DUF8_HEMAN (Hypothetical protein n=4 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1DUF8_HEMAN) HSP 1 Score: 87.0 bits (214), Expect = 5.870e-19 Identity = 38/57 (66.67%), Postives = 46/57 (80.70%), Query Frame = 1
Query: 13 GFHKVVGGKALRLFRPEELELLICGNPQLDFLALERNSKYEDGYKRDTPVIKNFWEV 183
GFH+V GG ALR+F PEELELLICG+P LDFLALE + EDG+ RD P+I+ FWE+
Sbjct: 176 GFHEVCGGAALRMFIPEELELLICGSPSLDFLALEEVTSTEDGFTRDHPLIRAFWEI 232
BLAST of mRNA_H-paniculata_contig8555.16529.1 vs. uniprot
Match: A0A7S4P7K0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P7K0_GUITH) HSP 1 Score: 88.2 bits (217), Expect = 7.270e-19 Identity = 41/57 (71.93%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 13 GFHKVVGGKALRLFRPEELELLICGNPQLDFLALERNSKYEDGYKRDTPVIKNFWEV 183
GFH+V GG ALR+F PEELELLICGNP LDF ALE + EDGY RD PVI NFW V
Sbjct: 678 GFHEVCGGPALRMFIPEELELLICGNPTLDFHALEEVTSTEDGYTRDHPVILNFWTV 734
BLAST of mRNA_H-paniculata_contig8555.16529.1 vs. uniprot
Match: A0A7S0M4Q2_9CRYP (Hypothetical protein n=2 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M4Q2_9CRYP) HSP 1 Score: 86.3 bits (212), Expect = 1.200e-18 Identity = 40/61 (65.57%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 1 ATRRGFHKVVGGKALRLFRPEELELLICGNPQLDFLALERNSKYEDGYKRDTPVIKNFWEV 183
A +GFH+V GG ALR+F PEELELLICG+P LDF ALE + EDGY RD PVI+ FWE+
Sbjct: 176 AFAQGFHEVCGGPALRMFVPEELELLICGSPSLDFHALEEVTCTEDGYTRDHPVIRAFWEI 236
BLAST of mRNA_H-paniculata_contig8555.16529.1 vs. uniprot
Match: A0A7S0CQN2_9EUKA (Hypothetical protein n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CQN2_9EUKA) HSP 1 Score: 87.4 bits (215), Expect = 1.360e-18 Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 1
Query: 1 ATRRGFHKVVGGKALRLFRPEELELLICGNPQLDFLALERNSKYEDGYKRDTPVIKNFWEV 183
A + GF KV GG AL+LFRPEEL +LICG+ +LDF ALER ++YE GY +DTP+IK+ W++
Sbjct: 676 AFKNGFTKVCGGPALKLFRPEELHMLICGSEELDFDALERKTRYEGGYTKDTPIIKDLWKI 736
BLAST of mRNA_H-paniculata_contig8555.16529.1 vs. uniprot
Match: A0A5B8ME34_9CHLO (Chromosome condensation regulation protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8ME34_9CHLO) HSP 1 Score: 87.0 bits (214), Expect = 1.860e-18 Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 1 ATRRGFHKVVGGKALRLFRPEELELLICGNPQLDFLALERNSKYEDGYKRDTPVIKNFWEV 183
A +GFH+V GG AL LFRPEELELL+CG P LDF ALE ++ Y+ GY D+P++K FWE+
Sbjct: 945 AFSQGFHQVCGGPALALFRPEELELLVCGQPSLDFGALELSTHYDAGYTNDSPIVKAFWEI 1005
BLAST of mRNA_H-paniculata_contig8555.16529.1 vs. uniprot
Match: A0A7S2DNP5_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DNP5_9EUKA) HSP 1 Score: 81.6 bits (200), Expect = 4.260e-18 Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 1
Query: 1 ATRRGFHKVVGGKALRLFRPEELELLICGNPQLDFLALERNSKYEDGYKRDTPVIKNFWEV 183
A +RGFH V GG+ L+LFR EELELLICG+P LDF ALER ++Y+DG+ R P + WEV
Sbjct: 15 AFQRGFHSVCGGECLQLFRWEELELLICGSPVLDFEALERATQYDDGFSRQHPTVVIMWEV 75
BLAST of mRNA_H-paniculata_contig8555.16529.1 vs. uniprot
Match: A0A8J1TCH7_OWEFU (Ofus.G022806 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TCH7_OWEFU) HSP 1 Score: 85.9 bits (211), Expect = 4.730e-18 Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 10 RGFHKVVGGKALRLFRPEELELLICGNPQLDFLALERNSKYEDGYKRDTPVIKNFWEV 183
RGFHKV G + L LFRP+E+ELL+CGNP+L+F ALE+++ Y DGY D +IKNFW +
Sbjct: 925 RGFHKVCGSEMLSLFRPDEIELLVCGNPKLNFSALEKSASYADGYHSDHLIIKNFWSI 982
BLAST of mRNA_H-paniculata_contig8555.16529.1 vs. uniprot
Match: A0A485L4K2_9STRA (Aste57867_15922 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4K2_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 8.770e-18 Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 1 ATRRGFHKVVGGKALRLFRPEELELLICGNPQLDFLALERNSKYEDGYKRDTPVIKNFWEV 183
A RGFH V GG AL LFR EELELL+CG+P LDF+ALE ++Y+DG+ ++PVIK FW V
Sbjct: 563 AFHRGFHLVCGGDALSLFRYEELELLVCGSPDLDFVALEEVTQYDDGFTEESPVIKYFWTV 623
BLAST of mRNA_H-paniculata_contig8555.16529.1 vs. uniprot
Match: A0A8B7YBB0_ACAPL (ubiquitin-protein ligase E3A-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YBB0_ACAPL) HSP 1 Score: 85.1 bits (209), Expect = 8.840e-18 Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 1 ATRRGFHKVVGGKALRLFRPEELELLICGNPQLDFLALERNSKYEDGYKRDTPVIKNFWEV 183
A RGFH V GG ALRLF+ E E+L+CG+P+LDF+ALE ++ YEDGY R P IK FW V
Sbjct: 994 AFARGFHTVCGGSALRLFQAAETEMLVCGSPELDFMALEASATYEDGYSRQHPTIKAFWTV 1054 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8555.16529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8555.16529.1 >prot_H-paniculata_contig8555.16529.1 ID=prot_H-paniculata_contig8555.16529.1|Name=mRNA_H-paniculata_contig8555.16529.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=65bp ATRRGFHKVVGGKALRLFRPEELELLICGNPQLDFLALERNSKYEDGYKRback to top mRNA from alignment at H-paniculata_contig8555:9091..9285- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8555.16529.1 ID=mRNA_H-paniculata_contig8555.16529.1|Name=mRNA_H-paniculata_contig8555.16529.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=195bp|location=Sequence derived from alignment at H-paniculata_contig8555:9091..9285- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8555:9091..9285- >mRNA_H-paniculata_contig8555.16529.1 ID=mRNA_H-paniculata_contig8555.16529.1|Name=mRNA_H-paniculata_contig8555.16529.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=390bp|location=Sequence derived from alignment at H-paniculata_contig8555:9091..9285- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |