mRNA_H-paniculata_contig8546.16519.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8546.16519.1
Unique NamemRNA_H-paniculata_contig8546.16519.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig8546.16519.1 vs. uniprot
Match: D7FYH7_ECTSI (Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH7_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 8.060e-47
Identity = 80/97 (82.47%), Postives = 89/97 (91.75%), Query Frame = 1
Query:    1 QHVRLSPISSDAYWSYSIDELARYDTPAMIDHVLKVTGQPQLCYVGFSQGTAQAFAALSSCPDLQDKVYLFVALSPAVRANHLSASMLLSLVQANLR 291
            +H+R SP++SDAYW +SIDELARYDTP MIDHVLKV+GQ QLCY+GFSQGTAQAFAA SS PDLQ KV+LFVALSPAVRANHLS S+LLSLVQANLR
Sbjct:  116 KHLRRSPVTSDAYWDFSIDELARYDTPTMIDHVLKVSGQTQLCYIGFSQGTAQAFAAFSSDPDLQAKVFLFVALSPAVRANHLSKSLLLSLVQANLR 212          
BLAST of mRNA_H-paniculata_contig8546.16519.1 vs. uniprot
Match: A0A836CJG0_9STRA (Lipase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJG0_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.770e-26
Identity = 59/97 (60.82%), Postives = 72/97 (74.23%), Query Frame = 1
Query:    1 QHVRLSPISSDAYWSYSIDELARYDTPAMIDHVLKVTGQPQLCYVGFSQGTAQAFAALSSCPDLQDKVYLFVALSPAVRANHLSASMLLSLVQANLR 291
            +H+  SP   +AYW++SIDELARYD PA++  VL VT  P+L YVGFSQG+AQ FAALS+   LQ +V LF ALSPA RA  LS S+L +LVQ NLR
Sbjct:   90 KHLSWSP-HDEAYWNFSIDELARYDVPALVGAVLGVTRAPRLAYVGFSQGSAQMFAALSADTALQARVALFAALSPAARAKGLSKSVLTTLVQTNLR 185          
BLAST of mRNA_H-paniculata_contig8546.16519.1 vs. uniprot
Match: W7TN68_9STRA (Sterol esterase tgl1 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN68_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.470e-25
Identity = 56/97 (57.73%), Postives = 75/97 (77.32%), Query Frame = 1
Query:    1 QHVRLSPISSDAYWSYSIDELARYDTPAMIDHVLKVTGQPQLCYVGFSQGTAQAFAALSSCPDLQDKVYLFVALSPAVRANHLSASMLLSLVQANLR 291
            +HV LSP S DAYW++SIDELAR+D PAM+D+VL+ TGQ +L YVGFSQG+AQAFAA ++   +  KV +F+AL+   RA  LS+S L +LV++N R
Sbjct:  300 KHVSLSP-SQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPRAKGLSSSYLSALVESNPR 395          
BLAST of mRNA_H-paniculata_contig8546.16519.1 vs. uniprot
Match: A0A4D9CWT9_9STRA (AB hydrolase-1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWT9_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.570e-25
Identity = 57/97 (58.76%), Postives = 75/97 (77.32%), Query Frame = 1
Query:    1 QHVRLSPISSDAYWSYSIDELARYDTPAMIDHVLKVTGQPQLCYVGFSQGTAQAFAALSSCPDLQDKVYLFVALSPAVRANHLSASMLLSLVQANLR 291
            +HV LSP S DAYW++SIDELAR+D PAM+D+VL+ TGQ +L YVGFSQG+AQAFAA ++   +  KV LF+AL+   RA  LS+S L +LV++N R
Sbjct:  266 KHVSLSP-SQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSLFLALAAPPRAKGLSSSYLSALVESNPR 361          
BLAST of mRNA_H-paniculata_contig8546.16519.1 vs. uniprot
Match: A0A813AYV9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AYV9_9DINO)

HSP 1 Score: 95.5 bits (236), Expect = 2.140e-21
Identity = 49/95 (51.58%), Postives = 71/95 (74.74%), Query Frame = 1
Query:    1 QHVRLSPISSDAYWSYSIDELARYDTPAMIDHVLKVTGQPQLCYVGFSQGTAQAFAALSSCPDLQDKVYLFVALSPAVRANHLSASMLLSLVQAN 285
            +H+  +P S++ YW++S+D++AR+D PAM+  +L VT QP+L YVGFSQGTAQ FAAL++ P L D+V  F AL+ AV    L+AS L SLV+++
Sbjct:   39 KHLHHAPDSAE-YWNFSLDDMARFDVPAMVAGILHVTQQPKLAYVGFSQGTAQMFAALAADPSLADRVVAFGALAAAVGVRGLAASALSSLVESD 132          
BLAST of mRNA_H-paniculata_contig8546.16519.1 vs. uniprot
Match: A0A139AD30_GONPJ (Alpha/beta-hydrolase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AD30_GONPJ)

HSP 1 Score: 94.4 bits (233), Expect = 9.810e-21
Identity = 47/95 (49.47%), Postives = 68/95 (71.58%), Query Frame = 1
Query:    1 QHVRLSPISSDAYWSYSIDELARYDTPAMIDHVLKVTGQPQLCYVGFSQGTAQAFAALSSCPDLQDKVYLFVALSPAVRANHLSASMLLSLVQAN 285
            +HV   P S  ++W +S+DE+ ++D PA +DH+LKVT   +L YVGFSQGTAQAFA+LS  P L  KV++F AL+PA +   LSAS++ + + A+
Sbjct:  227 KHVSKKP-SELSFWDFSMDEIVQFDVPATVDHILKVTKAEKLSYVGFSQGTAQAFASLSLNPTLNSKVHVFCALAPAAQPEGLSASVVSNFITAS 320          
BLAST of mRNA_H-paniculata_contig8546.16519.1 vs. uniprot
Match: A0A4P9X835_9FUNG (AB hydrolase-1 domain-containing protein (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9X835_9FUNG)

HSP 1 Score: 94.0 bits (232), Expect = 1.040e-20
Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 1
Query:    1 QHVRLSPISSDAYWSYSIDELARYDTPAMIDHVLKVTGQPQLCYVGFSQGTAQAFAALSSCPDLQDKVYLFVALSPAVRANHLSASMLLSLVQAN 285
            +H+ L P + DA+W +S+D L  +D PA +D+VLK  G P L YVGFSQGTAQ FAALS   +L  K+ LF+AL+P  R + L    + SLV A+
Sbjct:  105 KHISLKP-NQDAFWDFSMDHLVLHDLPASVDYVLKTAGAPSLSYVGFSQGTAQGFAALSLSRELNQKINLFIALAPVARPHGLENKTVQSLVNAS 198          
BLAST of mRNA_H-paniculata_contig8546.16519.1 vs. uniprot
Match: A0A507QIZ5_MONPU (Cholesterol esterase n=1 Tax=Monascus purpureus TaxID=5098 RepID=A0A507QIZ5_MONPU)

HSP 1 Score: 94.0 bits (232), Expect = 2.180e-20
Identity = 49/93 (52.69%), Postives = 69/93 (74.19%), Query Frame = 1
Query:    7 VRLSPISSDAYWSYSIDELARYDTPAMIDHVLKVTGQPQLCYVGFSQGTAQAFAALSSCPDLQDKVYLFVALSPAVRANHLSASMLLSLVQAN 285
            V+ SP++++ +WS+SIDE A YD P  I+++L+VTG+P L Y+GFSQGTAQAFA LS  P L  KV +FVAL+PA+    LS   + SL++A+
Sbjct:  178 VKHSPVTNE-FWSFSIDEFALYDIPDSIEYILEVTGEPSLSYIGFSQGTAQAFATLSIHPYLNQKVDVFVALAPAMAPTSLSNPTVDSLMKAS 269          
BLAST of mRNA_H-paniculata_contig8546.16519.1 vs. uniprot
Match: F0UXR7_CLAGR (TGL1 (Fragment) n=1 Tax=Cladonia grayi TaxID=27339 RepID=F0UXR7_CLAGR)

HSP 1 Score: 89.4 bits (220), Expect = 4.830e-20
Identity = 46/93 (49.46%), Postives = 65/93 (69.89%), Query Frame = 1
Query:    7 VRLSPISSDAYWSYSIDELARYDTPAMIDHVLKVTGQPQLCYVGFSQGTAQAFAALSSCPDLQDKVYLFVALSPAVRANHLSASMLLSLVQAN 285
             R SP S+D +W++S+D+ A +D P  ID++L  T QP L Y+GFSQGTAQAFA LS  P L DK+ +F+AL+PA+    L   ++ SLV+A+
Sbjct:   92 TRFSPSSND-FWNFSMDQFAFHDIPDSIDYILATTSQPSLSYIGFSQGTAQAFATLSIHPTLNDKIDVFIALAPAMSPAGLRNGIVDSLVKAS 183          
BLAST of mRNA_H-paniculata_contig8546.16519.1 vs. uniprot
Match: A0A4P9Y7M6_9FUNG (Sterol esterase-like protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y7M6_9FUNG)

HSP 1 Score: 92.8 bits (229), Expect = 5.350e-20
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 1
Query:    1 QHVRLSPISSDAYWSYSIDELARYDTPAMIDHVLKVTGQPQLCYVGFSQGTAQAFAALSSCPDLQDKVYLFVALSPAVR 237
            +H+   P +S  +W +SIDELARYD P  ID+VL++TGQ  L Y+GFSQGTAQ FAALS  P+L DKV  F+AL+PA +
Sbjct:  177 KHLTEKP-NSRKFWDFSIDELARYDIPNTIDYVLRMTGQSTLSYIGFSQGTAQMFAALSINPELNDKVNSFIALAPATK 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8546.16519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYH7_ECTSI8.060e-4782.47Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
A0A836CJG0_9STRA3.770e-2660.82Lipase n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
W7TN68_9STRA2.470e-2557.73Sterol esterase tgl1 (Fragment) n=1 Tax=Nannochlor... [more]
A0A4D9CWT9_9STRA2.570e-2558.76AB hydrolase-1 domain-containing protein n=2 Tax=M... [more]
A0A813AYV9_9DINO2.140e-2151.58Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A139AD30_GONPJ9.810e-2149.47Alpha/beta-hydrolase n=1 Tax=Gonapodya prolifera (... [more]
A0A4P9X835_9FUNG1.040e-2049.47AB hydrolase-1 domain-containing protein (Fragment... [more]
A0A507QIZ5_MONPU2.180e-2052.69Cholesterol esterase n=1 Tax=Monascus purpureus Ta... [more]
F0UXR7_CLAGR4.830e-2049.46TGL1 (Fragment) n=1 Tax=Cladonia grayi TaxID=27339... [more]
A0A4P9Y7M6_9FUNG5.350e-2058.23Sterol esterase-like protein n=1 Tax=Piptocephalis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8546contigH-paniculata_contig8546:517..1212 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score163.3
Seed ortholog evalue5.7e-38
Seed eggNOG ortholog2880.D7FYH7
Preferred nameTGL1
KEGG rclassRC00055,RC00523
KEGG koko:K01052
KEGG ReactionR01462
KEGG Pathwayko00100,ko04142,ko04979,map00100,map04142,map04979
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004771,GO:0005575,GO:0005622,GO:0005623,GO:0005811,GO:0006066,GO:0006629,GO:0006694,GO:0006696,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008610,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016298,GO:0016787,GO:0016788,GO:0031224,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044425,GO:0044464,GO:0046165,GO:0052689,GO:0071704,GO:0097384,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653
EggNOG free text desc.hydrolase activity, acting on ester bonds
EggNOG OGsCOG0596@1,KOG2624@2759
EC3.1.1.13
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size294
Cds size294
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931074.004837-CDS-H-paniculata_contig8546:516..6971622931074.004837-CDS-H-paniculata_contig8546:516..697Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8546 517..697 -
1691481578.0392072-CDS-H-paniculata_contig8546:516..6971691481578.0392072-CDS-H-paniculata_contig8546:516..697Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8546 517..697 -
1622931074.0183485-CDS-H-paniculata_contig8546:1099..12121622931074.0183485-CDS-H-paniculata_contig8546:1099..1212Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8546 1100..1212 -
1691481578.0542293-CDS-H-paniculata_contig8546:1099..12121691481578.0542293-CDS-H-paniculata_contig8546:1099..1212Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8546 1100..1212 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8546.16519.1prot_H-paniculata_contig8546.16519.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8546 517..1212 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8546.16519.1

>prot_H-paniculata_contig8546.16519.1 ID=prot_H-paniculata_contig8546.16519.1|Name=mRNA_H-paniculata_contig8546.16519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp
QHVRLSPISSDAYWSYSIDELARYDTPAMIDHVLKVTGQPQLCYVGFSQG
TAQAFAALSSCPDLQDKVYLFVALSPAVRANHLSASMLLSLVQANLR*
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mRNA from alignment at H-paniculata_contig8546:517..1212-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8546.16519.1 ID=mRNA_H-paniculata_contig8546.16519.1|Name=mRNA_H-paniculata_contig8546.16519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=696bp|location=Sequence derived from alignment at H-paniculata_contig8546:517..1212- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGCACGTTCGACTGTCACCGATCTCGTCCGATGCCTACTGGTCCTACAG CATCGACGAACTTGCGCGGTACGACACCCCGGCCATGATTGATCATGTTC TGAAGGTCACTGGGTGAGTTTCGAGTTTTTTTACCACTTTATTTTGTCCT TGACAATTTTTAACCTTTTGCTCTTTTGTTTTAGAGAGAGAATCAACAAA AACCAATTCTGATTTGGCGATAGGGCCCCCCCGTCGCTGTCGCTTGTTTG TTAGTGTTCCTGAGGCTCAACCAATAAATGACCTGGGTACCCACAACCGA TCGACTCTTAGCCGTGTGTTATCCCCAAACCTACTGGATAATAACAGGTA ACTAGGGGAAAAACTGGCACGTGCGGGAATGGTTAACCCCAACTGGAATA ACTCACCATCTACGGCAACAGCTAATACCACGCCTGTCTCCCTCTGTCTT CCCCCGTGTCCCCCTATCATTTTATTTTGTTGTCAATTTATTTTTCAAAT TGTCGGTTCTGGCAGACAGCCTCAGCTGTGCTATGTCGGATTTTCGCAGG GCACTGCTCAGGCATTCGCAGCGCTATCGAGTTGCCCCGATCTCCAAGAT AAGGTGTATCTTTTCGTGGCGCTTTCGCCCGCGGTACGCGCGAATCACCT CTCGGCGAGCATGCTGCTCTCTCTGGTGCAGGCGAATCTCAGGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig8546:517..1212-

>mRNA_H-paniculata_contig8546.16519.1 ID=mRNA_H-paniculata_contig8546.16519.1|Name=mRNA_H-paniculata_contig8546.16519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=588bp|location=Sequence derived from alignment at H-paniculata_contig8546:517..1212- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGCACGTTCGACTGTCACCGATCTCGTCCGATGCCTACTGGTCCTACAG
CATCGACGAACTTGCGCGGTACGACACCCCGGCCATGATTGATCATGTTC
TGAAGGTCACTGGCAGCACGTTCGACTGTCACCGATCTCGTCCGATGCCT
ACTGGTCCTACAGCATCGACGAACTTGCGCGGTACGACACCCCGGCCATG
ATTGATCATGTTCTGAAGGTCACTGGACAGCCTCAGCTGTGCTATGTCGG
ATTTTCGCAGGGCACTGCTCAGGCATTCGCAGCGCTATCGAGTTGCCCCG
ATCTCCAAGATAAGGTGTATCTTTTCGTGGCGCTTTCGCCCGCGGTACGC
GCGAATCACCTCTCGGCGAGCATGCTGCTCTCTCTGGTGCAGGCGAATCT
CAGGTAAACAGCCTCAGCTGTGCTATGTCGGATTTTCGCAGGGCACTGCT
CAGGCATTCGCAGCGCTATCGAGTTGCCCCGATCTCCAAGATAAGGTGTA
TCTTTTCGTGGCGCTTTCGCCCGCGGTACGCGCGAATCACCTCTCGGCGA
GCATGCTGCTCTCTCTGGTGCAGGCGAATCTCAGGTAA
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