mRNA_H-paniculata_contig852.16490.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig852.16490.1 vs. uniprot
Match: D8LBZ9_ECTSI (TLDc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBZ9_ECTSI) HSP 1 Score: 380 bits (977), Expect = 1.260e-127 Identity = 184/244 (75.41%), Postives = 212/244 (86.89%), Query Frame = 3
Query: 348 EPPQDIVEKIFNVFFGQKEDRPA-DLGRISVKKFPDQYPAEKVLQAEPVKGDTKEMAVIRPLLKQTELEFRNLKLAYSASSMGWRPEAFHKGVDKKGPCIIVGKTRGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWKDGDTSKRAIKLRKIGGAGLAVWDKPECGPLFGSDGFGVSMQKNSPKIARCKLGSYYERMPG--GGSNLFSEQETG-IAEMVDLKAFVGVYAPGEIVPFDDAIPFSIT 1067
E QD++EK F++FFG K+D P DL RI+VKKFPDQYPAEK+LQAEPVKGD+K+MAVIRPLLKQTELEFR LKL Y A GW+P AFHKGVD KGP ++VGKT+GGAVVGGYNPKGWVGYGEYRPGLSAFLFTW+DGDT+KRA+KLRKIGGAGLAVWDKPECGPLFGSDGFGV MQK S ++ R KLGSYYER+P GG+++F+ + G IAEMVDLKA+VGVY GE +PFDDAIPFS++
Sbjct: 79 EEQQDVIEKFFSMFFGNKDDAPGGDLDRITVKKFPDQYPAEKILQAEPVKGDSKDMAVIRPLLKQTELEFRKLKLVYDAKRNGWKPAAFHKGVDFKGPGLVVGKTKGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWRDGDTNKRAMKLRKIGGAGLAVWDKPECGPLFGSDGFGVGMQKGSERMGRSKLGSYYERLPAAYGGASIFAPGDNGGIAEMVDLKAYVGVYERGEKIPFDDAIPFSLS 322
BLAST of mRNA_H-paniculata_contig852.16490.1 vs. uniprot
Match: A0A6V1NAM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NAM7_HETAK) HSP 1 Score: 321 bits (823), Expect = 1.430e-104 Identity = 159/247 (64.37%), Postives = 192/247 (77.73%), Query Frame = 3
Query: 336 MSTEEPPQDIVEKIFNVFFGQKEDRPADLGRISVKKFPDQYPAEKVLQAEPVKGDTKEMAVIRPLLKQTELEFRNLKLAYSASSMGWRPEAFHKGVDKKGPCIIVGKTRGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWKDGDTSK--RAIKLRKIGGAGLAVWDKPECGPLFGSDGFGVSMQKNSPKIARCKLGSYYERMPGGGSNLFSEQET-GIAEMVDLKAFVGVYAPGEIVPFDDAIPFSIT 1067
M+ + QD VEK+F+ FFGQKE+ P L R + + FPDQ+PA K A+PV GD+K+MAV RPLLKQTELE R LKL Y A+ GW P AFHKGVDK GP +IV KT+GGAV+GGYNPKGWVGYGEYRPGLSAFLFTW DG+T +A+KLRKIGGAGLAV DKPE GP+FG+DG + M +IA+C LGSYYERMPGG +LF++ E+ E+VDLKA+VG+YA GE +PF+DAIPFS+T
Sbjct: 60 MNQGQEDQDPVEKLFSFFFGQKEEEPLGLKRFNKETFPDQFPATKTEFADPVPGDSKDMAVFRPLLKQTELESRKLKLVYDANKNGWNPTAFHKGVDKLGPGVIVAKTKGGAVIGGYNPKGWVGYGEYRPGLSAFLFTWPDGNTVDYTKALKLRKIGGAGLAVIDKPEEGPVFGADGLCIRMAPKKQRIAQCSLGSYYERMPGGKKSLFAQGESLANTELVDLKAYVGIYAKGEEIPFNDAIPFSLT 306
BLAST of mRNA_H-paniculata_contig852.16490.1 vs. uniprot
Match: A0A835YK91_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK91_9STRA) HSP 1 Score: 297 bits (760), Expect = 7.250e-96 Identity = 146/248 (58.87%), Postives = 180/248 (72.58%), Query Frame = 3
Query: 348 EPPQDIVEKIFNVFFGQK---EDRPADLGRISVKKFPDQYPAEKVLQAEPVKGDTKEMAVIRPLLKQTELEFRNLKLAYSASSMGWRPEAFHKGVDKKGPCIIVGKTRGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWKDGDTSKRAIKLRKIGGAGLAVWDKPECGPLFGSDGFGVSMQKNS-----PKIARCKLGSYYERMPGGGSNLFSEQETGIAEMVDLKAFVGVYAPGEIVPFDDAIPFSIT 1067
E QDIVE+ F FGQK ++ P + R++++ FPDQYPA K A+PV GDTK+MA+ RP L QT LE R LK Y A+ GWRP AFH+GVDKKGP +++ +T GGAVVGGYNPKGWVG EYRPGLSAFLFTW DGDTSKR +KLRK+GGAGLA +D+ GP FGS+G V + S ++ARCKLG+YYERMP GG+++F+ E G A++ +LKAFVGVYA E +PFDD I S T
Sbjct: 4 EQQQDIVERFFGFVFGQKALDDEAPMGMKRMTIENFPDQYPATKDRWADPVAGDTKDMALFRPALAQTMLEKRKLKCVYDAARDGWRPAAFHRGVDKKGPGVVLARTAGGAVVGGYNPKGWVGESEYRPGLSAFLFTWPDGDTSKRPVKLRKVGGAGLACYDRASTGPFFGSEGLCVPLDAGSGGGGAERVARCKLGAYYERMPDGGNSMFAPGEKGAAQLTELKAFVGVYAKDEEIPFDDVIYLSFT 251
BLAST of mRNA_H-paniculata_contig852.16490.1 vs. uniprot
Match: A0A7S4EVG5_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EVG5_CHRCT) HSP 1 Score: 251 bits (641), Expect = 2.550e-76 Identity = 126/237 (53.16%), Postives = 164/237 (69.20%), Query Frame = 3
Query: 360 DIVEKIFNVFFGQ-KEDRPADLGRISVKKFPDQYPAEKVLQAEPVKGDTKEMAVIRPLLKQTELEFRNLKLAYSASSMGWRPEAFHKGVDKKGPCIIVGKTRGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWKDGDTSKRAIKLRKIGGAGLAVWDKPECGPLFGSDGFGVSMQKNSPKIARCKLGSYYERMPGGGSNLFSEQETGI-AEMVDLKAFVGVYAPGEIVPFDDAIPFSI 1064
D +EK+F VFFG +E A L R + PD YPA K A+PV+GD +E ++RPLLK T LE+ L+LAY A+ GWR FH+ VDK GPCI+V +T GGAV GGY PKG+ GYGEYR ++AFL+TW DGDT + IKL+K+GGAGLA D+PE GP FG++G + M S +IAR KLG YYERMP GG ++F+ + E+ +L+ +VGV+ GE +PFD AIPF+I
Sbjct: 136 DFIEKLFGVFFGAPQEGEVAGLARTA--SAPDTYPATKTEFADPVEGDIEEATILRPLLKNTNLEYLPLRLAYDANRDGWRAADFHEKVDKTGPCIVVCETEGGAVCGGYAPKGFAGYGEYRGSIAAFLYTWPDGDTDRAPIKLQKMGGAGLATIDEPETGPRFGAEGLSIPMDPGSERIARSKLGPYYERMPDGGGSIFAANDNSKRCELKELRVYVGVWPEGERIPFDGAIPFAI 370
BLAST of mRNA_H-paniculata_contig852.16490.1 vs. uniprot
Match: A0A448ZH24_9STRA (TLDc domain-containing protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZH24_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.380e-75 Identity = 128/246 (52.03%), Postives = 167/246 (67.89%), Query Frame = 3
Query: 339 STEEPPQDI----VEKIFNVFFGQKEDRPADLGRISVKKFPDQYPAEKVLQAEPVKGDTKEMAVIRPLLKQTELEFRNLKLAYSASSMGWRPEAFHKGVDKKGPCIIVGKTRGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWKDGDTSKRAIKLRKIGGAGLAVWDKPECGPLFGSDGFGVSMQKNSPKIARCKLGSYYERMPGGGSNLFSEQETGIAEMVDLKAFVGVYAPGEIVPFDDAIPFSI 1064
S +E P D V+KIF+VFFG+KE P + R ++FP+QYPA AEPV D K+MAV+RP+LK T LE R LKL YSA+ GW P +FH+ VDK G ++V T G V GGYNPKGWVGYGE R ++AFL+ + G TS+ KLRK+GG LA D PE GP FG+D + ++K+SP++AR KLGSYYER PGGG+ LF ++ + + + DLK + GVYA GE +PF DA PF++
Sbjct: 69 SEDEEPDDFSDDPVDKIFSVFFGKKEATPMGMKRFGRERFPEQYPAVLDEWAEPVASDDKDMAVLRPMLKNTNLETRGLKLTYSANRDGWDPVSFHRKVDKLGGGLVVCTTEDGLVCGGYNPKGWVGYGEARGSIAAFLYVFTKG-TSELPTKLRKVGGPSLAQQDLPETGPSFGADSLVIPLEKSSPRVARSKLGSYYERFPGGGNTLFGKRGSSV-RLKDLKVYHGVYAEGEYIPFTDAEPFAL 312
BLAST of mRNA_H-paniculata_contig852.16490.1 vs. uniprot
Match: A0A5J4YZD4_PORPP (TLDc domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZD4_PORPP) HSP 1 Score: 238 bits (608), Expect = 3.060e-72 Identity = 115/248 (46.37%), Postives = 168/248 (67.74%), Query Frame = 3
Query: 348 EPPQDIVEKIFNVFFGQKEDRPADLGRISVKKFPDQYPAEKVLQAEPVKGDTKE--MAVIRPLLKQTELEFRNLKLAYSASSMGWRPEAFHKGVDKKGPCIIVGKTRGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWKDGDTSKRAIKLRKIGGAGLAVWDKPECGPLFGSDGFGVSM-------QKNSPKIARCKLGSYYERMPGGGSNLFSEQETGIAEMVDLKAFVGVYAPGEIVPFDDAIPFSI 1064
E D++E+ +KE P L R KFP+ +PAE QA+PV+GD K+ + +IRP++ +T L+ R ++ + A GW+ +FH+ VDK+GP +++ +T+GGAVVGGY+PKGWVGYGE R ++AFLFTW DGDTSKR+IKLRKIG A +A D+PE GP FG++G + + + ++ARCKLG+YY+++P G +LF+ E + E+V L+AFVG+Y E +PF DA+PFS+
Sbjct: 58 EEDLDVIERAMKWLGFKKEKTPFGLARFDRDKFPELWPAELEEQADPVEGDEKDPDLQLIRPMMARTSLQTRPMECVFDAEVHGWKAASFHRCVDKRGPAVVLARTKGGAVVGGYSPKGWVGYGESRGSIAAFLFTWPDGDTSKRSIKLRKIGMASMASMDQPESGPRFGAEGLTIPLLDARATEYDGTERVARCKLGTYYDKLPDGSKSLFAHGEGLLTELVSLRAFVGIYGSDEEIPFLDALPFSL 305
BLAST of mRNA_H-paniculata_contig852.16490.1 vs. uniprot
Match: R7QPM3_CHOCR (TLDc domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPM3_CHOCR) HSP 1 Score: 236 bits (601), Expect = 3.630e-71 Identity = 122/244 (50.00%), Postives = 161/244 (65.98%), Query Frame = 3
Query: 360 DIVEKIFNVFFGQKEDRPADLGRISVKKFPDQYPAEKVLQAEPVKGDTKEMAVIRPLLKQTELEFRNLKLAYSASSMGWRPEAFHKGVDKKGPCIIVGKTRGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWKDGDTSKRAIKLRKIGGAGLAVWDKPECGPLFGSDGFGVSM--------QKNSPKIARCKLGSYYERMPGGGSNLFSEQETGIAEMV-DLKAFVGVYAPGEIVPFDDAIPFSI 1064
DIVE+++ FG K+ P L R +FP+ YPA A+PV DT EMA+ RPLL +T+L+ R ++L Y A+ GW + FH+ +++KG +++ T G AV GGYNPKG+VGYGE R +AFLFTW DGDTSK A+KLRK+GGA LAV D+PE GP FG+D V + + +IA KLGSYYER P GG+ LF+ E E++ +LK F GVYA GE +PFDDA+PFS+
Sbjct: 65 DIVERVYTAIFGAKQAEPFGLKRFDRDRFPELYPATLDEFADPVPADTPEMALFRPLLARTQLQTREIQLLYDANRDGWSADTFHEALNRKGASVVMASTAG-AVFGGYNPKGFVGYGESRGSKAAFLFTWPDGDTSKPAVKLRKVGGAALAVVDEPETGPKFGADSLVVPLRPPRANWGESQKDRIAYSKLGSYYERRPDGGNTLFANGENPKGEVLQELKVFAGVYADGEEIPFDDALPFSL 307
BLAST of mRNA_H-paniculata_contig852.16490.1 vs. uniprot
Match: A0A7S1TFM7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFM7_9RHOD) HSP 1 Score: 234 bits (597), Expect = 1.160e-70 Identity = 120/245 (48.98%), Postives = 165/245 (67.35%), Query Frame = 3
Query: 360 DIVEKIFNVFFGQKEDRPADLGRISVKKFPDQYPAEKVLQAEPVKGDTKEMAVIRPLLKQTELEFRNLKLAYSASSMGWRPEAFHKGVDKKGPCIIVGKTRGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWKDGDTSKRAIKLRKIGGAGLAVWDKPECGPLFGSDGFGVSMQKN-------SPKIARCKLGSYYERMPGGGSNLF---SEQETGIAEMVDLKAFVGVYAPGEIVPFDDAIPFSI 1064
D++EK+F VFFG+KE+ P L R +FP+Q+PA AE V+GD+K++A+ RPLL +T+L R+L+L + S GW EAFH+ VD++G +++ +T G V GGYNPKGWVGYGE R +++FLFTW DG+T+K A+K+RK+G A L+V D PE GP FG+D + +Q S K AR KLGSYYER+P G + LF S G + +K FVGVY GE +PF+DA+PFS+
Sbjct: 56 DLLEKLFGVFFGKKEENPLGLKRFDRDRFPEQFPAPLDEFAEAVQGDSKDVALFRPLLARTQLCRRSLRLVFDTDSDGWTAEAFHRAVDRQGAGVVLLRTVDGVVCGGYNPKGWVGYGESRGSVASFLFTWPDGNTNKPAMKMRKVGQAYLSVLDNPETGPQFGADSLVIPLQDTRLRGPDGSEKQARSKLGSYYERLPDGRNCLFPDSSHPRKGYCYVDSVKVFVGVYEEGEQIPFNDALPFSL 300
BLAST of mRNA_H-paniculata_contig852.16490.1 vs. uniprot
Match: A0A7S2ZTI4_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZTI4_9RHOD) HSP 1 Score: 233 bits (593), Expect = 2.320e-70 Identity = 118/243 (48.56%), Postives = 158/243 (65.02%), Query Frame = 3
Query: 357 QDIVEKIFNVFFGQKEDRPADLGRISVKKFPDQYPAEKVLQAEPVKGDTKEMAVIRPLLKQTELEFRNLKLAYSASSMGWRPEAFHKGVDKKGPCIIVGKTRGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWKDGDTSKRAIKLRKIGGAGLAVWDKPECGPLFGSDGFGVSMQK-------NSPKIARCKLGSYYERMPGGGSNLFSEQETGIAEMVDLKAFVGVYAPGEIVPFDDAIPFSI 1064
+D+ EK+F + FG++E+ P R +FP+QY A A+PV DT+EMA+ RP+L +T+L R L+L Y A GW AFH+ V+KKG +++ T GG V GGYNPKGWVGYGE R L++FLFTW GDTSK AIKLRK+GG ++V D PE GP FG+DG V + S KIA KLG++YE P G +LFS+ E ++V L+A+ GVY GE +PFDDA+P ++
Sbjct: 36 KDLGEKLFGLIFGKQEETPLGFQRFDRDRFPEQYEATLDEFADPVASDTEEMALFRPMLARTQLVTRELQLLYDAEEHGWTASAFHECVNKKGAGVVLAVTEGGTVCGGYNPKGWVGYGESRGSLASFLFTWPGGDTSKPAIKLRKVGGKSMSVLDDPETGPKFGADGLVVMLMSPFQTELDGSEKIASSKLGTFYEVRPDGVRHLFSKAEGKKTKLVSLRAYFGVYEEGEEIPFDDAVPVAL 278
BLAST of mRNA_H-paniculata_contig852.16490.1 vs. uniprot
Match: A0A7S1DAF9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAF9_CYCTE) HSP 1 Score: 233 bits (593), Expect = 3.170e-70 Identity = 122/237 (51.48%), Postives = 155/237 (65.40%), Query Frame = 3
Query: 357 QDIVEKIFNVFFGQKEDRPADLGRISVKKFPDQYPAEKVLQAEPVKGDTKEMAVIRPLLKQTELEFRNLKLAYSASSMGWRPEAFHKGVDKKGPCIIVGKTRGGAVVGGYNPKGWVGYGEYRPGLSAFLFTWKDGDTSKRAIKLRKIGGAGLAVWDKPECGPLFGSDGFGVSMQ-KNSPKIARCKLGSYYERMPGGGSNLFSEQETGIAEMVDLKAFVGVYAPGEIVPFDDAIPFSI 1064
+D VE IF+ FFG++E++P + R +FP+QYPA A+PV D K+MA IRPLLK T LE R LKL YSA+ GW AFHK VDK G I+V T+ G V GGYNPKGWVGYGE R ++AFLF + + T+ A KLRK+GG LA D PE GP FG+D + + K+ PKIAR KLGSYYER G + LF + T ++ DLK + G+Y GE +PF DA PF++
Sbjct: 56 EDPVENIFSFFFGKREEKPMGMARFGPDRFPEQYPATTTEWADPVSSDNKDMAKIRPLLKNTNLETRALKLTYSANRDGWNAAAFHKAVDKLGGGIVVCTTKDGLVCGGYNPKGWVGYGEARGSIAAFLFVFNNDGTT--ATKLRKVGGKSLAQMDMPESGPSFGADSLVIPLNDKSQPKIARSKLGSYYERFEDGTNTLF--RTTSSVQLKDLKVYHGIYEEGEYIPFTDAEPFAL 288 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig852.16490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig852.16490.1 >prot_H-paniculata_contig852.16490.1 ID=prot_H-paniculata_contig852.16490.1|Name=mRNA_H-paniculata_contig852.16490.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=355bp MIESLIFTAGSEKYVTFGHVISPHHARQHRFIMIHAVLDLPFPAPIPISSback to top mRNA from alignment at H-paniculata_contig852:487..9775+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig852.16490.1 ID=mRNA_H-paniculata_contig852.16490.1|Name=mRNA_H-paniculata_contig852.16490.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9289bp|location=Sequence derived from alignment at H-paniculata_contig852:487..9775+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig852:487..9775+ >mRNA_H-paniculata_contig852.16490.1 ID=mRNA_H-paniculata_contig852.16490.1|Name=mRNA_H-paniculata_contig852.16490.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2130bp|location=Sequence derived from alignment at H-paniculata_contig852:487..9775+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |