mRNA_H-paniculata_contig8486.16468.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig8486.16468.1
Unique Name	mRNA_H-paniculata_contig8486.16468.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig8486.16468.1 vs. uniprot
Match: D8LTY2_ECTSI (Signal recognition particle 54 kDa protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTY2_ECTSI)

HSP 1 Score: 651 bits (1679), Expect = 3.410e-224
Identity = 330/379 (87.07%), Postives = 361/379 (95.25%), Query Frame = 3

Query:    3 GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVEQFRGDKYEVIIVDTSGRHKQEDALFEEMKEIQEAVQPDNTVLIMDATQGQAVFDQATAFHDAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEPFDAQSFVSRLLGFGDVKGLMRQLKESQEGSGDPKEMMERMT-KGQFTLRDLYHRLSSAMKMGPMSKVMGMIPGMGEMAQLASNSSNQQQFKRNLYMMDSMTDDELDGKVDLEKSESRILRIARGSGTHPEEVRGLLKLHKHFEKIFGKVGKTMKGEAGKVKQLQRNPALAKQHVDRMDPKVVEQLGGRQKVLEMMKSGG--GPGG 1130
            GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGV+QF+ +KYEVIIVDTSGRHKQEDALF+EMKEIQEAVQPDNT LIMDATQGQAVFDQA AFH+AVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLE FDAQSFVSRLLGFGD+KGLMRQ++ESQEGSGDPKEMMER++ KG+FTLRDLY +LSSAMK+GPM+KVMGMIPGMGEMAQ+A+NS+ Q  FK+NLY+MDSMTDDELDGKVDL + ESR+LRIARGSGTHP++VRGLLKLHKHFEK+FGKVGK MKG+A K KQLQRNPALAKQH+++MDPKVVE LGGR KVLE++K+GG  GPGG
Sbjct:  121 GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMRQIQESQEGSGDPKEMMERISNKGKFTLRDLYKQLSSAMKLGPMNKVMGMIPGMGEMAQMANNSTTQGMFKKNLYIMDSMTDDELDGKVDLSQCESRLLRIARGSGTHPDQVRGLLKLHKHFEKVFGKVGKNMKGDASKAKQLQRNPALAKQHLNQMDPKVVESLGGRAKVLEIIKNGGAGGPGG 499

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BLAST of mRNA_H-paniculata_contig8486.16468.1 vs. uniprot
Match: A0A835YYR6_9STRA (Signal recognition particle 54 kDa protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYR6_9STRA)

HSP 1 Score: 474 bits (1219), Expect = 1.480e-154
Identity = 265/437 (60.64%), Postives = 317/437 (72.54%), Query Frame = 3

Query:    3 GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVEQFRGDKYEVIIVDTSGRHKQEDALFEEMKEIQEAVQPDNTVLIMDATQGQAVFDQATAFHDAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEPFDAQSFVSRLLGFGDVKGLMRQLKESQEGSGDPKEMMERMTKGQFTLRDLYHRLSSAMKMGPMSKVMG-MIPGMGEMAQLASNSSNQQQFKRNLYMMDSMTDDELDGKVDLEKSESRILRIARGSGTHPEEVRGLLKLHKHFEKIFGKVGK-------TMKGEAGKVKQLQRNP-------ALAKQHVDRMDPKVVEQLGGRQKVLEMMKSGGGPGGXXXXXXXXXXXXXXXXXXXXXMPGMPXXXX-SMAEMMKTMGGAGGG 1265
            G+GKTTTIAKFAHY+QRKGW+VAMVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPVRIA+EGVEQFR D++EVIIVDTSGRHKQEDALFEEM+EIQ AVQPDN V +MDATQGQAV DQA AFH+AV VGSV+ITKLDGHAKGGGA+SAVAAT SPITFLG GEHFDDLEPF A SFVS++LGFGD   L+R+L+++ +   DPK+MM+RMTKGQFTLRD Y ++   +K+GP++K+MG M+PG+ + AQ           KR LYMMDSM DDELDGKVD+  +E R+ RIARGSGT  EEV+ LL+ HK  EK+  ++GK       T    A K+ QL +NP       A++K     M P++++Q+GGR  V + M+  GG                        MPGM       MA MM+ MGG G G
Sbjct:  111 GSGKTTTIAKFAHYYQRKGWRVAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVRIAEEGVEQFRKDRFEVIIVDTSGRHKQEDALFEEMREIQAAVQPDNCVFVMDATQGQAVADQARAFHEAVPVGSVVITKLDGHAKGGGAMSAVAATKSPITFLGSGEHFDDLEPFVASSFVSKMLGFGDFGSLLRELQDTNDPGMDPKKMMDRMTKGQFTLRDFYQQIQGVLKLGPLNKMMGGMMPGIPDTAQQ----------KRFLYMMDSMRDDELDGKVDIAGNEKRVTRIARGSGTRVEEVQLLLRQHKAREKVVAQMGKSGMMNAATDPAMAAKMAQLMQNPNSRASQAAMSKM----MSPQMLKQMGGRDGVAKRMREMGG------------------------MPGMAGGGGMDMASMMQAMGGGGAG 509

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BLAST of mRNA_H-paniculata_contig8486.16468.1 vs. uniprot
Match: A0A7S4VL55_9STRA (Signal recognition particle 54 kDa protein (Fragment) n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VL55_9STRA)

HSP 1 Score: 470 bits (1210), Expect = 3.380e-153
Identity = 249/391 (63.68%), Postives = 304/391 (77.75%), Query Frame = 3

Query:    3 GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVEQFRGDKYEVIIVDTSGRHKQEDALFEEMKEIQEAVQPDNTVLIMDATQGQAVFDQATAFHDAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEPFDAQSFVSRLLGFGDVKGLMRQLKESQEGSGDPKEMMERMTKGQFTLRDLYHRLSSAMKMGPMSKVMGMIPGMGE-MAQLASNSSNQQQFKRNLYMMDSMTDDELDGKVDLEKS-----ESRILRIARGSGTHPEEVRGLLKLHKHFEKIFGKVGKT-MKGEAGK------VKQLQRNPALAKQHVDRMDPKVVEQLGGRQKVLEMMKS--GGGPGG 1130
            GAGKTT+I K+A+Y+QR+GWK  MVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPV IA+EGV QF  D YEVIIVDTSGRH+QE ALFEEM+EI  AV PDNTV +MDATQGQAV+DQA AFHD+V VGSVI+TKLDGHAKGGGALSAVAATNSPI FLG GEHFDD +PF+AQSFVS+LLGFGDV+G M ++K S   S   +E+ME+M+KG+FTLRD+Y +  S MKMGP++KVMGM+PG+ E +   +++     + K+ +YMMDSMTD ELDGKVD+ K      ESRI RIARGSGTHP+EV+ +L+ HK FE +  ++GK+ M G+AG         Q++RNP      +  MDPK+++Q+GG + V  MMK    GG GG
Sbjct:  119 GAGKTTSIGKYANYYQRRGWKTCMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVAIAEEGVAQFAEDGYEVIIVDTSGRHRQESALFEEMQEISAAVSPDNTVFVMDATQGQAVYDQAQAFHDSVPVGSVIVTKLDGHAKGGGALSAVAATNSPIIFLGSGEHFDDFDPFNAQSFVSKLLGFGDVRGFMEEMK-SVHDSKTQEELMEKMSKGEFTLRDMYKQFQSIMKMGPLNKVMGMMPGVPEYLIPKSADDEGTLRLKKFMYMMDSMTDAELDGKVDMHKKYDPAVESRIKRIARGSGTHPKEVQMMLQAHKQFESVISRMGKSGMMGKAGAENQRKLAAQMKRNPNQVMSQLKNMDPKILKQMGGEENVRNMMKQYQSGGMGG 508

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BLAST of mRNA_H-paniculata_contig8486.16468.1 vs. uniprot
Match: A0A7S2UL07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UL07_9STRA)

HSP 1 Score: 466 bits (1200), Expect = 3.520e-153
Identity = 271/449 (60.36%), Postives = 339/449 (75.50%), Query Frame = 3

Query:    3 GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVEQFRGDKYEVIIVDTSGRHKQEDALFEEMKEIQEAVQPDNTVLIMDATQGQAVFDQATAFHDAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEPFDAQSFVSRLLGFGDVKGLMRQLKESQEGSGDPKEMMERMTKGQFTLRDLYHRLSSAMKMGPMSKVMGMIPGMGE-MAQLASNSSNQQQFKRNLYMMDSMTDDELDGKVDLEKSE-------------------SRILRIARGSGTHPEEVRGLLKLHKHFEKIFGKVGKT-MKGEAGKVKQLQ------RNPALAKQHVDRMDPKVVEQLGGRQKVLEMMKSGGGPGGXXXXXXXXXXXXXXXXXXXXXMPGMPXXXXSMAEMMKTMG-GAGGG 1265
            GAGKTT+IAKFA+Y+QRKGWK AMVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPV IA+EGV+QF+ D YEVIIVDTSGRH+QE ALFEEM+EI  AV PDNTV +MDATQGQAV+DQA AFH AV VGSVI+TKLDGHAKGGGALSAVAAT SPI FLG GEHFDD +PF+A+SFVS+LLG+GDV+GLM +++  Q+ S   +E+ME+M+KGQFTLRD+Y++  + MK+GP++KVMGMIPG+ + +   + N     + K+ ++MMDSMTD ELDGKVD   ++                   SRI RIA GSGTHP+EV+ LL+ HK FE +  K+GK+ M G+ G+ +Q Q      +NP+   QH+++M+P++++Q+GG   V++MM+  G  GG  XXXXXXXXXXXXX        GMP    +MA+MM  MG G GGG
Sbjct:    1 GAGKTTSIAKFANYYQRKGWKTAMVCADTFRAGAFDQLKQNATKLRIPFYGSYTEADPVLIAEEGVQQFKDDGYEVIIVDTSGRHRQESALFEEMQEISAAVLPDNTVFVMDATQGQAVYDQALAFHGAVEVGSVIVTKLDGHAKGGGALSAVAATQSPIIFLGSGEHFDDFDPFNARSFVSKLLGYGDVRGLMEEMQSMQDPSSQ-EELMEKMSKGQFTLRDMYNQFQNVMKIGPLNKVMGMIPGVPDYLIPKSDNDEGTMRLKKFMFMMDSMTDKELDGKVDFHGTQPVTGKNASKTVAYDPKQVHSRIRRIAAGSGTHPKEVQMLLQCHKQFEGVVSKMGKSGMIGKGGEARQKQIAAQMRKNPSQIMQHLNKMNPQMLQQMGGPSNVMKMMQQMGAGGGMPXXXXXXXXXXXXX--------GMPDMN-TMAQMMGQMGMGXGGG 439

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BLAST of mRNA_H-paniculata_contig8486.16468.1 vs. uniprot
Match: F0Y473_AURAN (Signal recognition particle 54 kDa protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y473_AURAN)

HSP 1 Score: 467 bits (1202), Expect = 1.230e-152
Identity = 240/373 (64.34%), Postives = 301/373 (80.70%), Query Frame = 3

Query:    3 GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVEQFRGDKYEVIIVDTSGRHKQEDALFEEMKEIQEAVQPDNTVLIMDATQGQAVFDQATAFHDAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEPFDAQSFVSRLLGFGDVKGLMRQLKESQEGSGDPKEMMERMTKGQFTLRDLYHRLSSAMKMGPMSKVMGMIPGMGEMAQLASNSSNQQQFKRNLYMMDSMTDDELDGKVDLEKSESRILRIARGSGTHPEEVRGLLKLHKHFEKIFGKVGKT--MKG-EAGKVKQLQRNPALAKQHVDR-MDPKVVEQLGGRQKVLEMMK 1109
            GAGKTTTIAKFA+++ RKG+K  MVCADTFRAGA+DQL+QNATKLRCPFYGSY+EADPVRIA EGV+QF+ +KYEVIIVDTSGRHKQE ALFEEM+EI+ A++P N + ++DATQGQAV +QA++FH+A+ +GSV+ITKLDGHAKGGGALSAVAAT +PI FLG GEHFDD EPF+A SFVSRLLG GD++GL+ Q+K++      P E+ME+ +KGQFTLRD+Y +  + MK+GP+SKVM MIPG+  M     + SN +  KR +YMMDSMTDDELD KVDL KS SRI R+ARGSG HP EV+ LLK HK FE +  K+GK+  MKG +A   KQ+QRNP    Q + + MDP++++Q+GG Q ++ MM+
Sbjct:  111 GAGKTTTIAKFANHYLRKGFKCCMVCADTFRAGAYDQLRQNATKLRCPFYGSYTEADPVRIAQEGVDQFKAEKYEVIIVDTSGRHKQETALFEEMQEIRAAIEPQNVIFVLDATQGQAVHEQASSFHEAIDIGSVVITKLDGHAKGGGALSAVAATGAPILFLGSGEHFDDFEPFNAHSFVSRLLGMGDMRGLVEQIKDTIGDDKQP-ELMEKFSKGQFTLRDMYEQFENVMKLGPLSKVMAMIPGIPSMMGGEGDESNNR-LKRFMYMMDSMTDDELDAKVDLNKSASRIERVARGSGCHPMEVQMLLKCHKQFESVVSKMGKSGLMKGGDAAMAKQMQRNPNQVMQQLHKAMDPRMLQQMGGAQNLMSMMQ 481

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BLAST of mRNA_H-paniculata_contig8486.16468.1 vs. uniprot
Match: A0A7S2WJL8_9STRA (Signal recognition particle 54 kDa protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJL8_9STRA)

HSP 1 Score: 465 bits (1197), Expect = 8.370e-152
Identity = 242/375 (64.53%), Postives = 301/375 (80.27%), Query Frame = 3

Query:    3 GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVEQFRGDKYEVIIVDTSGRHKQEDALFEEMKEIQEAVQPDNTVLIMDATQGQAVFDQATAFHDAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEPFDAQSFVSRLLGFGDVKGLMRQLKESQEGSGDPKEMMERMTKGQFTLRDLYHRLSSAMKMGPMSKVMGMIPGM--GEMAQLASNSSNQQQFKRNLYMMDSMTDDELDGKVDLEKSESRILRIARGSGTHPEEVRGLLKLHKHFEKIFGKVGKTMK---GEAGKVKQLQRNPALAKQHVDR-MDPKVVEQLGGRQKVLEMMK 1109
            G+GKTTTIAK+A+Y+ RKG+K  MVCADTFRAGA+DQLKQNATKLRCPFYGSY+EADPV+IA +GVEQF+ +KYEVIIVDTSGRHKQE  LFEEM+EI+ AV+PDN V I+DATQGQAV DQA++FH+AV +GS +ITKLDGHAKGGGALSAVAAT +PITFLG GEHFDDLEPF A+SFVSRLLG GD++GL+  +KE+     +P E+M++  KG FTLRD+Y +  + MK+GP+SKVM MIPG+  G M Q A +  +  + KR +YMMDSMTD ELDG+VDLEKS  RI RI+RGSGTHP EV+ LL+ HK FE +  K+GK+     G+A   KQ+ RNP    Q + + MDP++++Q+GG Q V++MMK
Sbjct:  111 GSGKTTTIAKYANYYLRKGFKCCMVCADTFRAGAYDQLKQNATKLRCPFYGSYTEADPVQIAQDGVEQFKSEKYEVIIVDTSGRHKQESVLFEEMQEIRAAVEPDNIVFILDATQGQAVHDQASSFHEAVDIGSCVITKLDGHAKGGGALSAVAATGAPITFLGSGEHFDDLEPFRAESFVSRLLGMGDMRGLVETIKETVGDDKNP-ELMDKFAKGVFTLRDMYEQFQNVMKLGPLSKVMSMIPGIPQGLMGQ-AGDQESSNRLKRFMYMMDSMTDAELDGQVDLEKSPGRIERISRGSGTHPMEVQQLLRTHKQFEGVVKKMGKSSMLRGGDANMAKQISRNPNQCLQQIHKVMDPRMLQQMGGAQNVMKMMK 483

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BLAST of mRNA_H-paniculata_contig8486.16468.1 vs. uniprot
Match: A0A7S3ZR98_9STRA (Signal recognition particle 54 kDa protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR98_9STRA)

HSP 1 Score: 464 bits (1194), Expect = 1.570e-151
Identity = 242/375 (64.53%), Postives = 303/375 (80.80%), Query Frame = 3

Query:    3 GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVEQFRGDKYEVIIVDTSGRHKQEDALFEEMKEIQEAVQPDNTVLIMDATQGQAVFDQATAFHDAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEPFDAQSFVSRLLGFGDVKGLMRQLKESQEGSGDPK--EMMERMTKGQFTLRDLYHRLSSAMKMGPMSKVMGMIPGMGEMAQLASNSSNQQQFKRNLYMMDSMTDDELDGKVDLEKSESRILRIARGSGTHPEEVRGLLKLHKHFEKIFGKVGKT--MKG-EAGKVKQLQRNPALAKQHVDR-MDPKVVEQLGGRQKVLEMMK 1109
            GAGKTTTIAKFA+Y+QRKG+K  MVCADTFRAGA+DQLKQNATKLRCPFYGSY+EADPV IA EGV QFR +KYEVIIVDTSGRH+QE ALFEEM+EI+ A++PDN V ++DATQGQAV +QAT+FH+A+ +GSV++TKLDGHAKGGGALSAVAAT +PI FLG GEHFDD EPF A+SFVSRLLG GD+  L++Q+K++    GD K  EMME+ +KG+FTLRD+Y +  + MK+GP+SKVM MIPG+ +M        N+   KR +YMMDSMTDDELDG+VDL ++ SR+ R+ARGSGTHP EV+ LL+ HK FE +  K+GK+  MKG +   VKQ+QRNP    Q + + MDP++++Q+GG Q ++ MMK
Sbjct:  111 GAGKTTTIAKFANYYQRKGFKCCMVCADTFRAGAYDQLKQNATKLRCPFYGSYTEADPVAIAAEGVAQFRKEKYEVIIVDTSGRHRQEAALFEEMQEIRVAIEPDNVVFVLDATQGQAVHEQATSFHEAIDIGSVVVTKLDGHAKGGGALSAVAATGAPILFLGSGEHFDDFEPFVARSFVSRLLGMGDMSTLVKQIKDT---IGDDKNDEMMEKFSKGEFTLRDMYEQFENVMKLGPLSKVMAMIPGIPQMGGEGDEGGNR--LKRFMYMMDSMTDDELDGRVDLNRAPSRVDRVARGSGTHPMEVQMLLRCHKQFEGVVTKMGKSGLMKGGDEQMVKQMQRNPNQVLQQLHKTMDPRMLQQMGGAQNLMNMMK 480

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BLAST of mRNA_H-paniculata_contig8486.16468.1 vs. uniprot
Match: A0A448YZ54_9STRA (SRP54 domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YZ54_9STRA)

HSP 1 Score: 463 bits (1192), Expect = 1.830e-149
Identity = 252/394 (63.96%), Postives = 303/394 (76.90%), Query Frame = 3

Query:    3 GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVEQFRGDKYEVIIVDTSGRHKQEDALFEEMKEIQEAVQPDNTVLIMDATQGQAVFDQATAFHDAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEPFDAQSFVSRLLGFGDVKGLMRQLKESQEGSGDPKE-MMERMTKGQFTLRDLYHRLSSAMKMGPMSKVMGMIPGMGE-MAQLASNSSNQQQFKRNLYMMDSMTDDELDGKVDLEKSE-----SRILRIARGSGTHPEEVRGLLKLHKHFEKIFGKVGKTMKGEAGK---------VKQLQRNPALAKQHVDRMDPKVVEQLGGRQKV---LEMMKSGGGPG 1127
            GAGKTTTIAKFA+Y+QR+GWK AMVCADTFRAGAFDQLKQNATKLR PFYGSY++ADPV IA+EGV+QF  + YEVIIVDTSGRH+QE  L EEM+EI  AV PDN VL+MDATQGQAVFDQA AF +AV VGSV+ITKLDGHAKGGGALSAVAAT SPI FLG GEHFDDLEPF+AQSF+S+LLGFGDV+GLM    E+  GS D KE +ME+M+KG+FTLRD+Y +    M MGP++K+MGM+PGM E +     +S +  + K+ LYMMDSMTD ELDGKVD    E     SRI RIA GSG HP+EV+ LL++HK FE +  K+GK+  G  GK           Q++RNP    Q +++MDPK++EQ+GGR++V   +E M  GGG G
Sbjct:  128 GAGKTTTIAKFANYYQRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTQADPVAIAEEGVDQFVKEHYEVIIVDTSGRHRQEAGLLEEMQEISAAVAPDNVVLVMDATQGQAVFDQAQAFSNAVDVGSVVITKLDGHAKGGGALSAVAATESPIIFLGSGEHFDDLEPFNAQSFISKLLGFGDVRGLM----EAMNGSPDDKEELMEKMSKGEFTLRDMYKQFQRVMNMGPLNKMMGMVPGMPEYLVPKGGDSDSNNRLKKFLYMMDSMTDKELDGKVDFSDHEEPQTMSRIRRIAAGSGNHPKEVQMLLQVHKQFEGMVSKMGKS--GMVGKQAXAQQQALAAQMRRNPNFINQRLNQMDPKLLEQMGGREQVKSHMENMARGGGGG 515

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BLAST of mRNA_H-paniculata_contig8486.16468.1 vs. uniprot
Match: A0A7R9W6K7_9STRA (Signal recognition particle 54 kDa protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6K7_9STRA)

HSP 1 Score: 460 bits (1184), Expect = 6.780e-149
Identity = 243/382 (63.61%), Postives = 303/382 (79.32%), Query Frame = 3

Query:    3 GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVEQFRGDKYEVIIVDTSGRHKQEDALFEEMKEIQEAVQPDNTVLIMDATQGQAVFDQATAFHDAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEPFDAQSFVSRLLGFGDVKGLMRQLKESQEGSGDPK---EMMERMTKGQFTLRDLYHRLSSAMKMGPMSKVMGMIPGMGE-MAQLASNSSNQQQFKRNLYMMDSMTDDELDGKVDLEKS-----ESRILRIARGSGTHPEEVRGLLKLHKHFEKIFGKVGKT-MKGEAGKVKQLQ------RNPALAKQHVDRMDPKVVEQLGGRQKVLE 1100
            GAGKTT+IAK+A+Y+QR+GWK AMVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPV IA++GV QF  + YEVIIVDTSGRH+QE ALFEEM+EI  AV+PDNTV +MDATQGQAV+DQA AF +AV VGSVI+TKLDGHAKGGGALSAVAAT+SPI FLG GEHFDD +PF+A+SFVS+LLG+GDV+GLM ++K  Q    DPK   E+ME+M KGQFTLRD+Y++  + MKMG M KVMGM+PG+ E +   + +  + ++ K+ +YMMDSMTD ELDGKVD+ K      ESRI RIA+GSGTHP+EV+ LL+ HK FE +  K+GK+ M G+AG  +Q Q      +NPAL +Q +  MDP V++ +GG   +++
Sbjct:  121 GAGKTTSIAKYANYYQRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVAIAEDGVAQFADEGYEVIIVDTSGRHRQESALFEEMQEISSAVRPDNTVFVMDATQGQAVYDQALAFQEAVDVGSVIVTKLDGHAKGGGALSAVAATDSPIIFLGSGEHFDDFDPFNAKSFVSKLLGYGDVRGLMEEMKSVQ----DPKTQEELMEKMAKGQFTLRDMYNQFQNMMKMGGMGKVMGMMPGIPEYLIPKSGDDESTRRLKKFMYMMDSMTDKELDGKVDMHKKGDPTVESRIRRIAKGSGTHPKEVQMLLQCHKQFEGVVSKMGKSGMMGKAGSARQKQVMEQMRKNPALMQQQLKNMDPNVLKSMGGSGNMMQ 498

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BLAST of mRNA_H-paniculata_contig8486.16468.1 vs. uniprot
Match: A0A4D9CXS1_9STRA (Signal recognition particle 54 kDa protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXS1_9STRA)

HSP 1 Score: 457 bits (1176), Expect = 2.270e-147
Identity = 244/390 (62.56%), Postives = 302/390 (77.44%), Query Frame = 3

Query:    3 GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVEQFRGDKYEVIIVDTSGRHKQEDALFEEMKEIQEAVQPDNTVLIMDATQGQAVFDQATAFHDAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEPFDAQSFVSRLLGFGDVKGLMRQLKE--SQEGSGDPKEMM-ERMTKGQFTLRDLYHRLSSAMKMGPMSKVMGMIPGM-------GEMAQLASNSSNQQQFKRNLYMMDSMTDDELDGKVDLEKSESRILRIARGSGTHPEEVRGLLKLHKHFEKIFGKVGKTMK--GEAGKVKQLQRNPALAKQHVDR-MDPKVVEQLGGRQKVLEMMKS-GGGPGG 1130
            G+GKTTTIAK+A+Y+QRKGWK  MVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPVRIA+EGV+QFR + YEVIIVDTSGRHKQE+ALFEEMKEIQ AV+PDN V +MDATQGQAVFDQA  FH A  VGSVI+TKLDGHAKGGGALSAVAAT +PI FLG GEHFDDL+ F+  SF+SRLLG GD++G + ++    ++EG  + +E M +R+ KGQFTLRD+Y +  + MK+GP+SKVMGM+PG        GE  +   + +   + KR L MMDSMTD ELDGKVDL KSESR+ RIARGSG HP EV+ LLK +  F ++F K+G  M   GE G  +Q+ RNP      + + +DP++++Q+GG + +++MMK+ GGG GG
Sbjct:  111 GSGKTTTIAKYANYYQRKGWKTCMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVRIAEEGVQQFRSEGYEVIIVDTSGRHKQEEALFEEMKEIQAAVRPDNVVYVMDATQGQAVFDQAQGFHQAATVGSVIVTKLDGHAKGGGALSAVAATGAPIIFLGSGEHFDDLDVFNPGSFISRLLGLGDMRGFLEEVSSLGAREGGKERQEAMAQRLVKGQFTLRDMYEQFENVMKLGPLSKVMGMLPGFPSFLMGGGEGGRGGQDEAATGRLKRFLTMMDSMTDAELDGKVDLNKSESRVNRIARGSGAHPMEVQFLLKTYAQFSQMFKKMGPMMLKGGEGGIQRQMARNPGGVMNQLSKAVDPRMLQQMGGAKGMMDMMKAMGGGSGG 500

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig8486.16468.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig8486.16468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LTY2_ECTSI	3.410e-224	87.07	Signal recognition particle 54 kDa protein (Fragme...	[more]
A0A835YYR6_9STRA	1.480e-154	60.64	Signal recognition particle 54 kDa protein n=1 Tax...	[more]
A0A7S4VL55_9STRA	3.380e-153	63.68	Signal recognition particle 54 kDa protein (Fragme...	[more]
A0A7S2UL07_9STRA	3.520e-153	60.36	Hypothetical protein (Fragment) n=1 Tax=Attheya se...	[more]
F0Y473_AURAN	1.230e-152	64.34	Signal recognition particle 54 kDa protein n=1 Tax...	[more]
A0A7S2WJL8_9STRA	8.370e-152	64.53	Signal recognition particle 54 kDa protein n=1 Tax...	[more]
A0A7S3ZR98_9STRA	1.570e-151	64.53	Signal recognition particle 54 kDa protein n=2 Tax...	[more]
A0A448YZ54_9STRA	1.830e-149	63.96	SRP54 domain-containing protein n=2 Tax=Pseudo-nit...	[more]
A0A7R9W6K7_9STRA	6.780e-149	63.61	Signal recognition particle 54 kDa protein n=1 Tax...	[more]
A0A4D9CXS1_9STRA	2.270e-147	62.56	Signal recognition particle 54 kDa protein n=2 Tax...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig8486	contig	H-paniculata_contig8486:325..10180 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	602.4
Seed ortholog evalue	1.7e-169
Seed eggNOG ortholog	2880.D8LTY2
Preferred name	SRP54
KEGG ko	ko:K03106
KEGG TC	3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9
KEGG Pathway	ko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG Module	M00335
Hectar predicted targeting category	other localisation
GOs	GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005048,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005786,GO:0005829,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006617,GO:0006810,GO:0006886,GO:0008104,GO:0008144,GO:0008150,GO:0008312,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022607,GO:0030942,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0034622,GO:0035639,GO:0036094,GO:0042221,GO:0042277,GO:0042493,GO:0042886,GO:0043021,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045047,GO:0045184,GO:0046907,GO:0048500,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0065003,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904
EggNOG free text desc.	7S RNA binding
EggNOG OGs	COG0541@1,KOG0780@2759
Ec32 ortholog description	SRP54, GTPase subunit of the signal recognition particle
Ec32 ortholog	Ec-12_003910.1
EC	3.6.5.4
COG Functional cat.	U
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000,ko02044
Exons	9
Model size	2687
Cds size	1371
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622931065.11649-UTR-H-paniculata_contig8486:324..1569	1622931065.11649-UTR-H-paniculata_contig8486:324..1569	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig8486 325..1569 -
1691481573.945993-UTR-H-paniculata_contig8486:324..1569	1691481573.945993-UTR-H-paniculata_contig8486:324..1569	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig8486 325..1569 -
1622931065.3556259-UTR-H-paniculata_contig8486:10109..10180	1622931065.3556259-UTR-H-paniculata_contig8486:10109..10180	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig8486 10110..10180 -
1691481574.048721-UTR-H-paniculata_contig8486:10109..10180	1691481574.048721-UTR-H-paniculata_contig8486:10109..10180	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig8486 10110..10180 -

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig8486.16468.1	prot_H-paniculata_contig8486.16468.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig8486 1570..10109 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig8486:325..10180-
coding sequence from alignment at H-paniculata_contig8486:325..10180-

protein sequence of mRNA_H-paniculata_contig8486.16468.1

>prot_H-paniculata_contig8486.16468.1 ID=prot_H-paniculata_contig8486.16468.1|Name=mRNA_H-paniculata_contig8486.16468.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=457bp
MVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVEQFRGDK
YEVIIVDTSGRHKQEDALFEEMKEIQEAVQPDNTVLIMDATQGQAVFDQA
TAFHDAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLE
PFDAQSFVSRLLGFGDVKGLMRQLKESQEGSGDPKEMMERMTKGQFTLRD
LYHRLSSAMKMGPMSKVMGMIPGMGEMAQLASNSSNQQQFKRNLYMMDSM
TDDELDGKVDLEKSESRILRIARGSGTHPEEVRGLLKLHKHFEKIFGKVG
KTMKGEAGKVKQLQRNPALAKQHVDRMDPKVVEQLGGRQKVLEMMKSGGG
PGGAAGADGGAAQAAAMAAMMGGGMPGMPGGMPSMAEMMKTMGGAGGGGG
MPNMADVMKLMGGVAGRGGGQAGASMPDMAQLMGMMGMGGVDGAGVTGGA
GRGRRR*

mRNA from alignment at H-paniculata_contig8486:325..10180-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig8486.16468.1 ID=mRNA_H-paniculata_contig8486.16468.1|Name=mRNA_H-paniculata_contig8486.16468.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9856bp|location=Sequence derived from alignment at H-paniculata_contig8486:325..10180- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGGTGCCGGGAAGACGACGACAATTGCGAAGTTTGCCCACTACTGGCAG
CGAAAGGGATGGAAGGTGGCCATGGTATGCGCGGACACTTTTCGAGCCGG
GGCTTTCGATCAGCTTAAGCAAAATGCCACAAAGCTTCGGGTATGTTCCG
TGGTATCGTCGGTTAGTGTTTATTTTCTGTTTGTGTGGCTGACTGACTTG
AAGTATGCATGTCCCGTGCTTTTGCCGTGGTTATAGACACAAGTCTCACT
GAATTCAAATTGCAGCTGTCTACAATTCCTCTTGATGGTACCGGCGACTT
CGAGGTCCCTGAGACTGGATTAGATATGTTCTATCAACTCGTGCGGTGTT
GGGGGTTGCCCGTGTTTGTGACATCCCCAGGAACTGAGCTACCTTTCGTT
GTTCTGCTCCAGTGTCCCTTCTACGGAAGCTATTCGGAGGCTGACCCAGT
CCGGATCGCGGACGAGGGCGTGGAACAGTTTCGAGGGGATAAATACGAGG
TGAACGTGCCAATCATCGTTGCGGACAAAATCATGATCCCGGACTCGTTT
TTGTAAGAGTTGGTATCACTTCGCTTTGTACACCACGAATGTGTGAGTAA
ACGAAATGGCCGACTCGGAGATATCTCTTCTATTTGAGAGTGTTGAAGCG
GTGATCGATATCCGATAGTTCATTTTCGATGACACGTTTACACGGACAAA
TACGAATGGAACATTCGCAACTATACCAAATCATTATTTTTCTCACTGGT
GTCGCTACATGGGAAGGGCTTTCTTGCCCGCCGAAGCCCCAGATTCCACT
GAAGTCTCGATGTGTGGCGCTGAAGTCCTTTCGTGTTGTGTGGGCAAGGA
GAACCAAGTCATTGCTCCGGCTTATATTCGTCATTGTCCGGTTGGTACAC
ATTTACCATCAGTTTTTCATTTAACCGAAATTTTCGCAGGTGCTTGCAAT
CGTTGGTGTGTTGGGACCTTCTTTCTATGCTGCACGTCTTCCGCTTTGAA
ACCCGACTTTAGACTTCAATAAACACATGAGTCATAATGGACGTTTTACT
CAGTAGTAGTTGGCAAAAACAAAAACAGGTCTCTCTTGTAACAGCAGTGG
TGTTGTCGCGGATGCTACGTGTATTTAGTAGGTGATCATCGTCGACACTT
CGGGGAGACACAAGCAGGAAGACGCTCTTTTCGAAGAGATGAAGGAAATA
CAAGAAGCGGTGCAACCCGACAACACGGTGCTGATTATGGATGCCACGCA
AGGCCAGGCCGTGTTCGACCAAGCAACTGCTTTCCATGGTAAGTTATCTT
TTCGCAATTTTTGTGTGGTTGGTTGTTCGGGTTCCTCGTCAATGTTCGTG
AGCGCCAGGGTTATCTTTCGCCGGAATTTCGACAGGAACGTTTGGATGTT
GGTCTCCAAGGTGAGACGGAGCCTCGAAGGTGTCTTCTCCTTTAACTGCT
CTCATTATTCTGCTCTCCTTGAGCATTGAGCGTGTTCCCGAAGCTACTTG
TTATATTCCACCAGTCCCTTTTTCATGTACAGTGATCGGCGCTAAGATTC
CTCATGTTTTTGGGACGAGCTGTCTGGGAAATATTCCGACGGTCAAAGAT
GAATTGCACACTTTTAATCCGCTGTGGTTATCCCCGAAGCTGTCGAGGGG
GGATTCTTGAATGTCGAACTCCGATGGGCAATCTTTTTGCACAACGACGT
GTCCTCACCATGCATTTTTTTACTTACATGTGTTGTGGGTTGTTTTTTGT
CATCTGCCCAACCGATGGGCTGCATTGGGCGAAATTGGCAAGTGTTTTTA
GAAAGGATAACATTTTTTCCAGAAATCCTTCTTGAAAGCCCCAAAATCCC
TCCTGAAAGCCTAGAGTTGTACAGCGTCAATCACTTCGGCCGTCACACAT
GAATGCCTCGGTATGCGGTTTTAAAGATATATCCACCTGCAGCGCTTGCA
AAAGCAACGAGATCGTATCGTCACTCCCTAGCCAACGTTGATAAACATCA
ACGTTGGGAATGTGCAGTAAAACTAACACTTGCTATTCATATTGTTCATC
GTTGGCATATAGGCAAGGGGCGCATCTAACTGGAATGTGGTTGAAGTTTC
ATGCCCGTAACAAGAAACAAACAAGATCGTTTGGAGAACAGTTCGTAACT
ACGAAAACAGACTCTTTGTGGACACTGCATGAAATTGTCTCGCCAGACGT
ACGTGACCTACGATTGTTCGACAACCGTCCGTACCCCTCGGAGTCGGACA
TGAAAACTTGAAGTTCGTCCTGTGATGCTGTAGACGACAGTTTTATGATG
ACAAGTGACAAGTTTTTGTTCACTGTTGACATATTTTTTTGAGACGCTTG
GTATGCTCGGACCCAAAATCCTCCGTCTAACTACAGTATTGCGGGGTATG
CATCACTAACGCCGACCAGACTCTCAGTGCCCCCTATCGTGGTGATGTAT
GAAGGTCCACAGAAGAAAGTGACCATTCGTGTCGAGCGCTCATTTCATGC
ACTTGGGTGGCAGGGTCCTATTCATGGGCGTTCTTGTCACAAACCTGTTC
ACTACGGTCGGCGAGTGGTTCGCGTACGTGCCGAGATTCTTCGTGGTTTA
ATGGGTGGAGGATAACCTTTCGTTTGTCTATTTTTGTAGCGCAAAACCTT
GCGGAAAATATACTCGGTACACGTGATCTGTGGCGAAAGTTTGTATTGCT
TCTGGCTTCGAGTTTTATCATGTACATCTATATATCTCATTTGTGGCCGG
GTTCGAGTCGGTCATGATGAATGTTTGATGCTCTGCAAGCTTGTTGGATG
GATTATGATAACATTTCCTTCATGTATTGAATAACTCGGTTGTTGCAGAT
GCGGTGGCTGTGGGATCCGTGATAATAACCAAACTGGACGGACATGCAAA
GGGAGGTGGGGCTCTGAGCGCGGTAGCGGCAACCAATAGCCCCATCACTT
TTCTTGGTGGAGGAGAACATTTTGATGATCTGGTGCGTTTCAATTGCAAC
ACGATTGCATTCACGTTTAGCGTGTTTAGACAGGACGTGAAGATATTTGC
CTCGGTGACTAATCATGCCATTGTCACGTGAGTGACCAAGGTTTAATCGA
TCACTTGGCGAAATTTTGTCTTTCGCTTTTTCTACGAGCGGCGTCAAGAG
AAATATTGACGTGAGATCCAAGAGCCCAAGTCCCGTGAAAAAACCAGGTA
TCCTGATATTCTATGCGGGAGGCCCACAACGGAGATGACTTAATATTCGG
GAAAAATACCGAATCTCTCACAGAAAACTGACCGTGAGGTACAGTATGTT
GCGTATGTGACTCGAAGTTCTGTCGGTGACACCATTTTCGTTCAGGAGCC
ATTTGACGCCCAATCATTTGTGAGTCGTTTGCTGGGCTTTGGGGACGTGA
AGGGGCTAATGCGGCAGCTGAAGGAAAGCCAGGAGGGTTCGGGAGACCCT
AAAGAGATGATGTGAGTAGTCTTCGTCAATACCCTTGTGCAGGCTGGCTC
GGGGAAGAACTATACCAGTTAGTCGCGACCCCTTATTCGGCATAAGTTCA
ACAAGTTGGAGTTTACATGTTGGCACATATCCTTCTGTGCCGTTCTCGCT
GAGTGGGTGTAAAATGGACCCTTGTCTTGGATTCCTTATATTTTACACCG
AAAACGAATATTCCACTGATTGTAATGCACGTACCATAATCCGTTGTTGT
GCTAAATGTGAATTCTGTGGTTCGTGGTTGTGGTTCGCAGGGAACGCATG
ACCAAGGGTCAGTTCACTCTGAGGGATTTGTACCACCGTCTCAGCTCCGC
AATGAAGATGGGACCAATGAGCAAGGTCATGGGGATGATACCCGGGATGG
GTGAAATGGCACAGGTACGCTTGCACGCTGAAGTGGCCAGCACATTTTTG
AAGCTCGAGATCCTCGATTTTTTTCCACCTTGGTCCGACGGTACGGGCAT
TGCTGTTGGGAATGTATCGTTTCAAGCCAGCCATATATGCTTGCTGCAAC
TAGTTGCACAAGGCAATATTCCCAAGAAATAGGGAAGGGCTTGATGCCTG
GGTTCGGTATGGTGATGCCGGTCATGATGGGATGTTTTTATTCCGACATG
TGGACGAGAGTTAAAAAGCATTCGGAGGATTTTCTGGATGAGCTTTATAT
ATTCCATGTGCCCTGGGGGTGAAACGCTTGTACACCCGAAGCGCAGTTGT
CATCAACTCCAGACCTTCTAGTCCACACGATTTCTTCTCACTAACGTACG
AGACATGCATGTGTTGGGCTTGTACTCAGAGAGTGGCGGATTTATTTCTG
GGAGGCGTGTTTTCATACTTCTCGTGATGTCTCTCCAGTTCTTACCGCCA
AAATTAATTTTTGTGAAAAGCAGAGGTGGTGTGGCAGAGTGACCTGAATA
AGGAAGCACTTACCTGATGTTCGCCCATCCTCTAGTGCTTGTCGCCGAAC
ACGTGACGCTTTTTGTTCCGCCGGAGCAAAGTCGTGACTTTTTTGGAGTT
TTGACTGAAAAACCAATTTTGCTACGGTGTTTTCACAAGGCAGATACTCA
ACCCGTCGTTGAAATTACACTTCAAGATGCAGAAATGGAGCGCGGAGGAA
AAGGTGGATTGACGCTGATGTCATTCTTTCCCTCCAATGTTTTGTTGTCC
ATGTCTCATGCGAGGCCCCTCAAAAATACCTGACGTGTTGGCCAAGCGTC
GGCCTCCCGCAAGCCAGCCCAATTGCGATATGATAAATCGTACACCTGTA
TCACAACGCACCCAGAAACATACGCTATCATCACTGTGGAGAGCACTTCG
AACCCCTGTCTAAGATCGCTCAAATCTAACTACGTGTATTCATACCAAGT
CAGTTTTTACGGCGACAGATGCGGCGAATTTCTCAAATCCGGATTGAACC
AAGCACGGGAAGCACTGCCCTAAAGCTACCCTCGGTAGTCGTCATCGTGC
CCCGTACCCGTCTGCATTATCTTCTATCGCCCATCATCTAATTGACACTG
GCCTACCGAGTTGTAGAATCGAGAATGTTGCACGCGGTTCAGTCACGGAT
AAATGGGGTACTGCACTTGCGCGCAGGGCTCCAGTGTCAGGGAGCAAGAC
GATACAATATTCAGGCGATCGTCAGCGTCAGACACTTGGAGAAATGGAAG
TTGGGTATGATACGAGGTCCACAAATAAAATGGCACAACCTTGATGTAGA
GAGGTTGTCTACTTTGCGTAAAGTTGTGGCATTTCGACTGCTGTCACTTC
TCCATTTTTTTGCTGGAATTTTCTCCGCACAGGAAGCTTTTTTTCTCTAG
CGTATCACCTGTTGAACAATGGTCTTTGTTGAAGAGGCGACTACGGGCTC
CACGTCATCCAGATTATGACATCCATATTTTTCTTCGGAAACGAATGGGC
AACGATAGAAGGCTTGGGCTGCTGTCGCTTGAAGATAAGAGTTGGAGCCT
ATATTATGTAGGGTTACATGTGAGCTTGATTGATAAATACGCGGCTTACG
GTTACGGACAGGTTGCTGTAAACAGCATGATTCTCTTCTCCGTATGTACT
TGTTTTACGTTTACCCACGTTAAACCTTCCCCACTATTTGTGCCATCCGT
TTAGTTTTTACTGTTTGGCCCAAAAATGAGAGTACGCTGGTCAAGACACA
TGTTCGGTAACTTGTGCATGTCTGCCTCCCGGCTATGTTGAACTCCTGGG
TGCACTACGGTATGTTTGCTGGTGATACATTTTTGCTATGTTTATCCTAC
TGCAACCAAAATCTCCATTGTATCCGTTGGACGTGTATTCACAGCTGGCG
AGTAATTCGTCGAATCAACAGCAGTTCAAGAGGAACCTGTACATGATGGA
TTCCATGACGGATGATGAGCTAGACGGAAAGGTAAGCAACCCCAGATGAG
TAGACCTGGCCGATTTCAAGAAAGTCCTTGATCCATTCTAGCACGTCCAA
CGACGTGTGCAGTGTTGCCGTTGCTGCTACCATGGCGTTTTTGATCTGAG
GTACATCACGAACTAGTGCACCAGGTGTCTTGATTTTACTTGAACGTGTA
CCAGGTCACTCATTCTCGTTTATAGTTGCAGGAGTTGAGGTATGTGGAGT
TCCGGCCACGAATCAGGAACAGAAGATGGGTGATAGGGGAGACTATGTAC
AACGGAGTCGGACAACTTATGACGTTGTTCTTGATGACTCTGTCTGTTGA
CGTTTGTCGCCTTTTCCGCATATTTGACGAGCTGGCCCTCGTACTCCCGT
GAGGAAGGGGTGTAGTACGCAAATGAGTACGTGGTCAGTTAATAATCGGG
TGATCGTCAATACCCATCGAAGTGAAACCCGTCTTGACCCATGTTGGCTG
CGTTGAGGGAGCTTGTACATCTTCAACATGAATGGTCGATGCTGTATTGG
ACACCGATTATGAACCTAGGGAGGTTGTTTTGGTACAACACGGAGGTTGA
GTCCTACTTACCCCCCAAGGTTTGAAAATTCGTTGATATATATTTAATGT
AACGGGGGGTGTCTCGAATGTCTGACGTCCGTGTTGTGAGACTCGCCTGA
CAGATGAAACGGCGGATTTATTTCTGGGAAGCATGTTTTCATTTCTCGTG
ATGTTTCTCCAGTTCTTACCGCCAATATTAAAGCTTTCTCTTTGGTGACC
CTCTGAGGTGGTGTGGCGGAGCGACCTGAACAAGGAAGCATTTGTTATCT
GATGCTCGCCCATCCTCCCTGTGCGTTGCCAAACATGCACTCAAGTGGTG
ATTGTATCATCATTTTTAGTGACAATCTTGTATCCTTTGCGTGGTGCCTT
AACCATTATTAATTCGCTATGCTAATGGTTGGAGACTTCGGTATTTCATA
TGTTATTTTATTATCTTGTTTCGGTCGCTACTGCTTTGGTAGCTGGGTTT
ATAATATTAGAATTCAAGAGTGTGGACCGAGGTATGGGTCGGATTTCTCA
GCTTTCTTAATTATATCAAGTGATTTTTAATCCTAACCATGAAATGGTTC
ATGGTTGATGCATTGTCATTTCGTCGTATGTCACACAAGGTCATACTTCA
TGACATGCGTCCACGTACTGGAAGTTCACACGGTGTCAAACCCTAGTACA
TGATATTTATCAAACCTGCTCTCACGAAGAGATCTTTCTGTTCATGGTTT
TAGTGTAGTCATCCCCCAAATACAACGAGGAACAGTACAGTAGAAGCCCG
TCGGGGACCAGATCCATAAGACTGAACACAATCAGTGCACGGAGTTGCGT
CCACCATCTTGGCTTTTTCATCATTTGTTCGGGTGAAAATGTTCGTAACC
ACGCCAGCACACACCATCCCGATGGGAAATAACAACCCACAAGCGTGCAA
TTATTCGAAACCCGGAGGAATCCGAGATTTTCTCTCAACACTAATTTCTA
GTGTAACTCATTACCTCGAAGTATCATGAATCCGTGTCCGGTTAACCGCC
AAACTTTGGATATCTTGCGAACAGCGGTGAATGGCTTGATGAACTTAATT
GCAAGATGAATCTTGGTGTTGTGTGGTACCAGTGTCCACGTCGCAGGTAA
AGTCTTCTTCCATCGTTAATGGATGGATGCCGTGTATTCGAGAATTTATT
CTGAATCGAGAACGGGTCAGTAGCTGAACGGTATCTTGAAGATTAAATTC
ACAAGAGCCCTGATCATGGCATCAGACTCATTCCAAGGTAACGTTTGTAC
GCTCATTTTGTACGATTAGAATGACCGTTTGTTGGGTTTGATGGATTCGT
ATGTATCCATTGCAAAATTTCAAATGATGTCAGGTTGATCTAGAGAAATC
GGAAAGTCGCATTCTGAGAATTGCCAGAGGCAGTGGCACGCATCCCGAGG
AAGTTCGAGGTCTGCTCAAGCTACATAAACACTTCGAGAAGATCTTCGGG
AAGGTTGGGAAGACCATGAAGGGAGAGGCGGGCAAGGTCAAGCAGCTGCA
GGTGGGGGGGGGTGTATTTGGTACGTTTTTGTTGTATGACTTTTGCGCTA
GTTCTGAAGGGGAAGAAAAAGGCGGTATTGAATTCGCCTTGATTTTCTCT
GAGAACTTTGGGTGACTTGACGTTCCTATCATATTTCGATGTGAGCTACA
GCAGTCTGTACCCCCTCCCTCTTTCCCTCGTTAACGTTCGTTGACGTCGA
AACTATTTGAATTTTCTCACATCTAATATCAGCGAAATCCAGCGCTTGCG
AAGCAGCACGTAGACCGTATGGACCCCAAGGTTGTAGAGCAATTAGGCGG
ACGGCAGAAGGTGCTGGAGATGATGAAAAGTGGCGGAGGACCGGGTGGGG
CGGCGGGTGCAGATGGAGGCGCCGCACAGGCAGCCGCCATGGCTGCCATG
ATGGGGGGAGGTATGCCGGGAATGCCAGGGGGTATGCCTAGCATGGCAGA
AATGATGAAGACGATGGGGGGTGCTGGCGGTGGTGGTGGTATGCCCAACA
TGGCGGATGTAATGAAATTGATGGGAGGTGTCGCTGGTAGAGGCGGTGGG
CAAGCGGGGGCAAGTATGCCGGACATGGCCCAGTTGATGGGGATGATGGG
AATGGGTGGTGTGGATGGAGCTGGGGTTACGGGTGGGGCTGGGCGAGGGA
GGCGACGATAGCGTTTCTTGTGTTGATTGTATTTAGAAGGCTCTTCGAAT
TACTGGCTTGTGTAGGGAGCTTGTTAATAAAGTTACTAGTGCGGGATGGG
TGCCTTATGGCTGTGTCGAGGACACTCGAAATTAGATCAATTGCGCAGTG
TCACGACAGTGATACTACGCCGCTGCACATAAATTTGTTTGGCGTGCGTC
CTGCTGTCGCCAAGTCGCACTGTGTCATAGTCCACCTGTCGTTGTGGCGT
TCTCAGACATGAGTGCGGTCAGCATTCATTGCGCCTCTCGTCGTCGGGGC
TACAGGATATGGTCACGAGTATACAGGAAGTTTTTACACTGTTTAGCGCT
TCAGGTCGACAGGTTACGAATTAATTGTTCAATCTGAAATTATGCATCTG
GCGTGTTCTACATGTGGATCGTTACGCTTTGCGGATCCAGGCATGGCAAA
CCAACGAACAACGGGTCGAACAGCACCAACGCGAGGGGGGCGTGCACCCC
GGAGATTTGTTTCCTGGTTGTCTTTGATTTGATAATTGGGTTCTTGTTTC
CTTCCCAATAGTAGATGCACTCCCTGGAAAATTGTCGTAAGAGGCTTTTG
TACAGTTGAGAGAATGGATATCCGCTCCCGTAGAAGAATATTGACTACTT
TCTTCGTCGGCATTTTGCCCTCACCCGAAACAGAAATGAAAATAGTTGGC
AGATTCACACTTTTTTGGGTTCAAATTGAACCATGTTAGTTCATTAACAC
CACGTGCTTCTACAGAGATGATTGCAGAGAAGTTGGAAGAAGAAAGCATA
TATTCGAATGAAACTTTCAGTGCAAACGTTGTGACATCTTTTGTACCGCA
ACCCTGAACTAGTGCATGAAGCTGTTTCAACTGGAGGTGGAATTAATGTG
AACGATATTGGAAGAGAGGAGATAATGTTCTCGATATTATTGATTTGAAG
AAGAGAGGAGAGTAAATAGGAAACATTCACACAACTACCTCAGTCCGTCC
GAATGGTGACACCTTCATCGTAGCGGACGCGATCAACGCATCCCAGGATA
AAGCTGATCATCCAGAAATGAATCATGAGTTGATTAAGGGAGAGGGTAAC
GGAAATTAACAGAACGTGTAACACCACGGATCGGTTTCAAATTGCCGAGG
TCAGATAATTTTCGACGAAGCAGTAGTCACCCGGGAAAGAGGAAGAAAAC
TGCTGTGTTCTGAGGATCTGGGTGAGCCACGTGGGGAAAGGGTACGATGC
GGTATA

Coding sequence (CDS) from alignment at H-paniculata_contig8486:325..10180-

>mRNA_H-paniculata_contig8486.16468.1 ID=mRNA_H-paniculata_contig8486.16468.1|Name=mRNA_H-paniculata_contig8486.16468.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2742bp|location=Sequence derived from alignment at H-paniculata_contig8486:325..10180- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTATGCGCGGACACTTTTCGAGCCGGGGCTTTCGATCAGCTTAAGCA
AAATGCCACAAAGCTTCGGATGGTATGCGCGGACACTTTTCGAGCCGGGG
CTTTCGATCAGCTTAAGCAAAATGCCACAAAGCTTCGGTGTCCCTTCTAC
GGAAGCTATTCGGAGGCTGACCCAGTCCGGATCGCGGACGAGGGCGTGGA
ACAGTTTCGAGGGGATAAATACGAGTGTCCCTTCTACGGAAGCTATTCGG
AGGCTGACCCAGTCCGGATCGCGGACGAGGGCGTGGAACAGTTTCGAGGG
GATAAATACGAGGTGATCATCGTCGACACTTCGGGGAGACACAAGCAGGA
AGACGCTCTTTTCGAAGAGATGAAGGAAATACAAGAAGCGGTGCAACCCG
ACAACACGGTGCTGATTATGGATGCCACGCAAGGCCAGGCCGTGTTCGAC
CAAGCAACTGCTTTCCATGGTGATCATCGTCGACACTTCGGGGAGACACA
AGCAGGAAGACGCTCTTTTCGAAGAGATGAAGGAAATACAAGAAGCGGTG
CAACCCGACAACACGGTGCTGATTATGGATGCCACGCAAGGCCAGGCCGT
GTTCGACCAAGCAACTGCTTTCCATGATGCGGTGGCTGTGGGATCCGTGA
TAATAACCAAACTGGACGGACATGCAAAGGGAGGTGGGGCTCTGAGCGCG
GTAGCGGCAACCAATAGCCCCATCACTTTTCTTGGTGGAGGAGAACATTT
TGATGATCTGATGCGGTGGCTGTGGGATCCGTGATAATAACCAAACTGGA
CGGACATGCAAAGGGAGGTGGGGCTCTGAGCGCGGTAGCGGCAACCAATA
GCCCCATCACTTTTCTTGGTGGAGGAGAACATTTTGATGATCTGGAGCCA
TTTGACGCCCAATCATTTGTGAGTCGTTTGCTGGGCTTTGGGGACGTGAA
GGGGCTAATGCGGCAGCTGAAGGAAAGCCAGGAGGGTTCGGGAGACCCTA
AAGAGATGATGAGCCATTTGACGCCCAATCATTTGTGAGTCGTTTGCTGG
GCTTTGGGGACGTGAAGGGGCTAATGCGGCAGCTGAAGGAAAGCCAGGAG
GGTTCGGGAGACCCTAAAGAGATGATGGAACGCATGACCAAGGGTCAGTT
CACTCTGAGGGATTTGTACCACCGTCTCAGCTCCGCAATGAAGATGGGAC
CAATGAGCAAGGTCATGGGGATGATACCCGGGATGGGTGAAATGGCACAG
GGAACGCATGACCAAGGGTCAGTTCACTCTGAGGGATTTGTACCACCGTC
TCAGCTCCGCAATGAAGATGGGACCAATGAGCAAGGTCATGGGGATGATA
CCCGGGATGGGTGAAATGGCACAGCTGGCGAGTAATTCGTCGAATCAACA
GCAGTTCAAGAGGAACCTGTACATGATGGATTCCATGACGGATGATGAGC
TAGACGGAAAGCTGGCGAGTAATTCGTCGAATCAACAGCAGTTCAAGAGG
AACCTGTACATGATGGATTCCATGACGGATGATGAGCTAGACGGAAAGGT
TGATCTAGAGAAATCGGAAAGTCGCATTCTGAGAATTGCCAGAGGCAGTG
GCACGCATCCCGAGGAAGTTCGAGGTCTGCTCAAGCTACATAAACACTTC
GAGAAGATCTTCGGGAAGGTTGGGAAGACCATGAAGGGAGAGGCGGGCAA
GGTCAAGCAGCTGCAGGTTGATCTAGAGAAATCGGAAAGTCGCATTCTGA
GAATTGCCAGAGGCAGTGGCACGCATCCCGAGGAAGTTCGAGGTCTGCTC
AAGCTACATAAACACTTCGAGAAGATCTTCGGGAAGGTTGGGAAGACCAT
GAAGGGAGAGGCGGGCAAGGTCAAGCAGCTGCAGCGAAATCCAGCGCTTG
CGAAGCAGCACGTAGACCGTATGGACCCCAAGGTTGTAGAGCAATTAGGC
GGACGGCAGAAGGTGCTGGAGATGATGAAAAGTGGCGGAGGACCGGGTGG
GGCGGCGGGTGCAGATGGAGGCGCCGCACAGGCAGCCGCCATGGCTGCCA
TGATGGGGGGAGGTATGCCGGGAATGCCAGGGGGTATGCCTAGCATGGCA
GAAATGATGAAGACGATGGGGGGTGCTGGCGGTGGTGGTGGTATGCCCAA
CATGGCGGATGTAATGAAATTGATGGGAGGTGTCGCTGGTAGAGGCGGTG
GGCAAGCGGGGGCAAGTATGCCGGACATGGCCCAGTTGATGGGGATGATG
GGAATGGGTGGTGTGGATGGAGCTGGGGTTACGGGTGGGGCTGGGCGAGG
GAGGCGACGATAGCGAAATCCAGCGCTTGCGAAGCAGCACGTAGACCGTA
TGGACCCCAAGGTTGTAGAGCAATTAGGCGGACGGCAGAAGGTGCTGGAG
ATGATGAAAAGTGGCGGAGGACCGGGTGGGGCGGCGGGTGCAGATGGAGG
CGCCGCACAGGCAGCCGCCATGGCTGCCATGATGGGGGGAGGTATGCCGG
GAATGCCAGGGGGTATGCCTAGCATGGCAGAAATGATGAAGACGATGGGG
GGTGCTGGCGGTGGTGGTGGTATGCCCAACATGGCGGATGTAATGAAATT
GATGGGAGGTGTCGCTGGTAGAGGCGGTGGGCAAGCGGGGGCAAGTATGC
CGGACATGGCCCAGTTGATGGGGATGATGGGAATGGGTGGTGTGGATGGA
GCTGGGGTTACGGGTGGGGCTGGGCGAGGGAGGCGACGATAG