mRNA_H-paniculata_contig8483.16467.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8483.16467.1 vs. uniprot
Match: D8LH59_ECTSI (Uroporphyrinogen decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH59_ECTSI) HSP 1 Score: 644 bits (1661), Expect = 6.490e-228 Identity = 332/424 (78.30%), Postives = 370/424 (87.26%), Query Frame = 1
Query: 115 RSVANIVPLLLVAWLAPSPSSGFVLNSGLAVRTLIESTRQVKHEMGMSATDEFPLQNDLMIRAARGEKVERTPVWLFRQAGRHLPEYTDYKNLKGKNFLELLQDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQAMGIEVEMPGGKGILVPNPLKDPADFKARIPKEVDVKDKLSHVIQAVVRIKQELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDFGERWLRDHPEASSNMMDLLTTVIVDYMAAQVEAGADILQVFEAMGGFISEDHFYERAMPYLASRVASELKERCPGVPLMVFARGATYANVALQAAGYDVVTLDTETGRKATRDALAEAARESGTEMAVVQGNFDPRLLTDMSPDS-VNVREATAQMMRELGPQKLIANLGEGLMGKENPKCVSAFVDGIHEFSERLIHIGELAD 1383
R+ ++ +LLV + F+ +S + R + +SA ++FPL+NDL++RAA+GEKVERTPVWLFRQAGRHLPEY+ YKN KGKNFLELLQDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQA+GI+VEMPGG GILVP+PLKDPADF+ARIPKEVDVKDKLSHVIQAV RIK+ELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTD GERWL+DHPEAS+ MMDLLT V++DYMAAQVEAGADILQVFEAMGGFISEDHFY+RAMPYL +R+ASELKERCPGVPLMVFARGATYANVALQAAGYDVVT+DTETGRKATRDAL EAARE+G E AVVQGNFDPRLLTD S S +NVREAT MMRELGPQKLIANLGEGLMGKE+PK V+AFVD IH++SE+LI G A+
Sbjct: 6 RACTAVLSVLLVVCCVEA----FIFSSSPRYARSPQHGRHRTCALRLSANEKFPLKNDLLVRAAKGEKVERTPVWLFRQAGRHLPEYSAYKNEKGKNFLELLQDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQALGIDVEMPGGVGILVPHPLKDPADFEARIPKEVDVKDKLSHVIQAVTRIKEELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDSGERWLQDHPEASAKMMDLLTGVVIDYMAAQVEAGADILQVFEAMGGFISEDHFYDRAMPYL-TRIASELKERCPGVPLMVFARGATYANVALQAAGYDVVTMDTETGRKATRDALEEAARETGREPAVVQGNFDPRLLTDESSMSEINVREATETMMRELGPQKLIANLGEGLMGKEDPKSVAAFVDAIHDYSEQLIRTGAAAE 424
BLAST of mRNA_H-paniculata_contig8483.16467.1 vs. uniprot
Match: A0A6H5L5D9_9PHAE (Uroporphyrinogen_deCOase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5D9_9PHAE) HSP 1 Score: 547 bits (1410), Expect = 2.160e-191 Identity = 280/324 (86.42%), Postives = 301/324 (92.90%), Query Frame = 1
Query: 415 LLQDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQAMGIEVEMPGGKGILVPNPLKDPADFKARIPKEVDVKDKLSHVIQAVVRIKQELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDFGERWLRDHPEASSNMMDLLTTVIVDYMAAQVEAGADILQVFEAMGGFISEDHFYERAMPYLASRVASELKERCPGVPLMVFARGATYANVALQAAGYDVVTLDTETGRKATRDALAEAARESGTEMAVVQGNFDPRLLTDMSPDS-VNVREATAQMMRELGPQKLIANLGEGLMGKENPKCVSAFVDGIHEFSERLIHIGELAD 1383
+ QDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQA+GI+VEMPGG GILVP+PLKDPADF+ARIPKEVDVKDKLSHVIQAV RIK+ELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTD GERWL+DHPEAS+ MMDLLT V++DYMAAQVEAGADILQVFEAMGGFISEDHFY+RAMPYL +R+ASELKERCPGVPLMVFARGATYANVALQAAGYDVVT+DTETGRKATRDAL EAARE G E AVVQGNFDPRLLTD S S +NVREAT MMRELGPQKLIANLGEGLMGKE+PK V+AFVD IH++SE+LI G A+
Sbjct: 1 MFQDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQALGIDVEMPGGVGILVPHPLKDPADFEARIPKEVDVKDKLSHVIQAVTRIKEELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDSGERWLQDHPEASAKMMDLLTGVVIDYMAAQVEAGADILQVFEAMGGFISEDHFYDRAMPYL-TRIASELKERCPGVPLMVFARGATYANVALQAAGYDVVTMDTETGRKATRDALEEAAREIGREPAVVQGNFDPRLLTDESSMSEINVREATETMMRELGPQKLIANLGEGLMGKEDPKSVAAFVDAIHDYSEQLIRTGAAAE 323
BLAST of mRNA_H-paniculata_contig8483.16467.1 vs. uniprot
Match: A0A1L3A3Z6_9EUGL (Plastid uroporphyrinogen decarboxylase isoform 1 (Fragment) n=1 Tax=Eutreptiella braarudii TaxID=215697 RepID=A0A1L3A3Z6_9EUGL) HSP 1 Score: 496 bits (1276), Expect = 3.610e-170 Identity = 256/379 (67.55%), Postives = 310/379 (81.79%), Query Frame = 1
Query: 250 GMSATDEFPLQNDLMIRAARGEKVERTPVWLFRQAGRHLPEYTDYKNLKGKNFLELLQDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQAMGIEVEMPGGKGILVPNPLKDPADFKARIPKEVDVKDKLSHVIQAVVRIKQELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDFGERWLRDHPEASSNMMDLLTTVIVDYMAAQVEAGADILQVFEAMGGFISEDHFYERAMPYLASRVASELKERCPGVPLMVFARGATYANVALQAAGYDVVTLDTETGRKATRDAL--------AEAARESGTEMAVVQGNFDPRLLTDMSPDSVNVREATAQMMRELGPQKLIANLGEGLMGKENPKCVSAFVDGIHEFSERLI 1362
G S +++PLQNDLM+RAARGE+VERTPVWLFRQAGRHLPEY YK KGKNFL+LL DP DVAEVTMQPIRRY LDAAILFSDILVV +A+GI+VEMPGGKGI VP PL P DF ARIPKEVDV KLSHVI AV IK+ LKGKVPLIGFSAAPWTLM+YMVGGSS++N + GE WLR++PEAS +++DLLT V+++YM+ QV+AGAD++QVFEAMG FISE++FYE AMP L R+A+EL+ER P VPL+ F RGATY++VALQ AGY+++T+DT+T RKATR AL A A R SG VQGNFD LL + S ++ VR+A A ++++LGPQ+LIANLGEGLMGKENP+ V+AFV+ +HE SE++I
Sbjct: 11 GPSLNEKYPLQNDLMLRAARGERVERTPVWLFRQAGRHLPEYMAYKEEKGKNFLQLLDDPLDVAEVTMQPIRRYPLDAAILFSDILVVAEALGIDVEMPGGKGITVPRPLTGPDDFYARIPKEVDVAQKLSHVITAVTTIKETLKGKVPLIGFSAAPWTLMYYMVGGSSRQNQENGEMWLREYPEASKDLLDLLTGVVIEYMSLQVQAGADMIQVFEAMGDFISEENFYEWAMPLL-KRIATELRERHPDVPLLCFTRGATYSSVALQQAGYNIITMDTKTDRKATRAALQADFEANGAPAGRVSG-----VQGNFDVALLREPSTEA-QVRDAVATLLQDLGPQQLIANLGEGLMGKENPELVTAFVNAVHEISEQMI 382
BLAST of mRNA_H-paniculata_contig8483.16467.1 vs. uniprot
Match: A0A1L3A3Z1_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Discoplastis spathirhyncha TaxID=215771 RepID=A0A1L3A3Z1_9EUGL) HSP 1 Score: 494 bits (1271), Expect = 1.860e-169 Identity = 252/375 (67.20%), Postives = 304/375 (81.07%), Query Frame = 1
Query: 250 GMSATDEFPLQNDLMIRAARGEKVERTPVWLFRQAGRHLPEYTDYKNLKGKNFLELLQDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQAMGIEVEMPGGKGILVPNPLKDPADFKARIPK-EVDVKDKLSHVIQAVVRIKQELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDFGERWLRDHPEASSNMMDLLTTVIVDYMAAQVEAGADILQVFEAMGGFISEDHFYERAMPYLASRVASELKERCPGVPLMVFARGATYANVALQAAGYDVVTLDTETGRKATRDALAEAARESGT---EMAVVQGNFDPRLLTDMSPDSVNVREATAQMMRELGPQKLIANLGEGLMGKENPKCVSAFVDGIHEFSERLI 1362
G + ++PLQNDLM+R ARGEKVERTPVWLFRQAGRHLPEY +YK GKNFLELL DP DVAEVTMQPIRRY++DAAILFSDILVV QA+GIEV MPGGKGI VPNPL DP DF+ R+ +VDV KLSHV+ AV IK+ LKGKVPLIGFSAAPWTLM+YMVGGSSKKN D GE+WLR+HP AS+ ++D+LT ++DYM+ QVEAGAD++QVFEAMG FISE++FY+ AMP L R+ASELK+R P VPL+VFARGATY+ VALQ AGYD++T+DT+T RK TR AL + G+ ++ VQGN D +LL D + + V R+ TA+M+ ELGPQ LIANLGEGLMGKE+P+ V AFVD +H+ SE++I
Sbjct: 9 GKAVNLKYPLQNDLMLRVARGEKVERTPVWLFRQAGRHLPEYNEYKESSGKNFLELLNDPKDVAEVTMQPIRRYDVDAAILFSDILVVAQALGIEVAMPGGKGITVPNPLADPQDFERRVGTGKVDVAHKLSHVLTAVTTIKETLKGKVPLIGFSAAPWTLMYYMVGGSSKKNADVGEKWLREHPAASTALLDVLTQTVIDYMSHQVEAGADMIQVFEAMGDFISEENFYKWAMPCL-KRIASELKQRHPAVPLLVFARGATYSTVALQQAGYDIITMDTKTDRKGTRAALEADFKAHGSPNKRVSGVQGNLDVKLLQDGTEEQV--RQETARMLEELGPQGLIANLGEGLMGKEDPRLVGAFVDAVHQISEQMI 380
BLAST of mRNA_H-paniculata_contig8483.16467.1 vs. uniprot
Match: A0A1L3A3Y2_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Euglena clara TaxID=215708 RepID=A0A1L3A3Y2_9EUGL) HSP 1 Score: 488 bits (1255), Expect = 5.490e-167 Identity = 251/375 (66.93%), Postives = 300/375 (80.00%), Query Frame = 1
Query: 250 GMSATDEFPLQNDLMIRAARGEKVERTPVWLFRQAGRHLPEYTDYKNLKGKNFLELLQDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQAMGIEVEMPGGKGILVPNPLKDPADFKARIPKE-VDVKDKLSHVIQAVVRIKQELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDFGERWLRDHPEASSNMMDLLTTVIVDYMAAQVEAGADILQVFEAMGGFISEDHFYERAMPYLASRVASELKERCPGVPLMVFARGATYANVALQAAGYDVVTLDTETGRKATRDALAEAARESGT---EMAVVQGNFDPRLLTDMSPDSVNVREATAQMMRELGPQKLIANLGEGLMGKENPKCVSAFVDGIHEFSERLI 1362
G S + +PLQNDL++RAARGE VERTPVWLFRQAGRHLPEY YK +GKNFLELL DP DVAEVTMQPIRRYNLDAAILFSDILVV +A+GIEV MPGGKGILVP PL DPADF+ARI + +DV +L+HV+ AV IK LKGKVPLIGFSAAPWTLM+YMVGGSSKKN D GE+WLRD+PEAS ++DLLT +++YM+ QVEAGAD++QVFEAMG FISE+HFY AMP L ++A+EL+ R P VPL+ FARGATY++VALQ AGYD++T+DT+T R+ATR AL +G+ +A VQGN D LL + ++EATAQ++ ELGPQ LIANLGEGLMGKE+P V+ FVD +HE SE +I
Sbjct: 10 GQSINELYPLQNDLILRAARGETVERTPVWLFRQAGRHLPEYNAYKESRGKNFLELLNDPADVAEVTMQPIRRYNLDAAILFSDILVVAEALGIEVTMPGGKGILVPQPLTDPADFQARIGSQPIDVAQRLAHVLTAVTTIKHALKGKVPLIGFSAAPWTLMYYMVGGSSKKNADIGEKWLRDYPEASQALLDLLTETVIEYMSLQVEAGADMIQVFEAMGDFISEEHFYTWAMPCL-KQIAAELRRRHPTVPLLAFARGATYSSVALQQAGYDIITMDTKTERQATRAALRADFDANGSPSGHVAGVQGNLDVALL--QTGTEQEIQEATAQLLGELGPQGLIANLGEGLMGKEDPALVACFVDAVHELSEEMI 381
BLAST of mRNA_H-paniculata_contig8483.16467.1 vs. uniprot
Match: A0A1L3A408_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Trachelomonas volvocina TaxID=103340 RepID=A0A1L3A408_9EUGL) HSP 1 Score: 487 bits (1253), Expect = 1.030e-166 Identity = 250/375 (66.67%), Postives = 303/375 (80.80%), Query Frame = 1
Query: 250 GMSATDEFPLQNDLMIRAARGEKVERTPVWLFRQAGRHLPEYTDYKNLKGKNFLELLQDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQAMGIEVEMPGGKGILVPNPLKDPADFKARI-PKEVDVKDKLSHVIQAVVRIKQELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDFGERWLRDHPEASSNMMDLLTTVIVDYMAAQVEAGADILQVFEAMGGFISEDHFYERAMPYLASRVASELKERCPGVPLMVFARGATYANVALQAAGYDVVTLDTETGRKATRDALAEAARESGT---EMAVVQGNFDPRLLTDMSPDSVNVREATAQMMRELGPQKLIANLGEGLMGKENPKCVSAFVDGIHEFSERLI 1362
G + +PLQNDLM+R ARGEKVERTPVWLFRQAGRHLPEY +YK +GKNFLELL DP+DVAEVTMQPIRRYN+DAAILFSDILVV +A+GIEV MPGGKGI VP+PL DPADF+AR+ VDV KLSHVI AV IK LKGKVPLIGFSAAPWTLM+YMVGGSSKKN D GE+WLR+HP+AS ++DLLT ++DYM+ QVEAGAD+LQVFEAM FISE +F + A+P L R+A EL+ R P VPL+VF RGA+Y++VALQ AGYD++T+DT+T RKATR AL + G+ ++ +QGNFD +LL D + + V REA A+M+++LGPQ LIANLGEGLMGKE+P+ V+ FVD +HE SE++I
Sbjct: 10 GRAINKMYPLQNDLMLRVARGEKVERTPVWLFRQAGRHLPEYNEYKESRGKNFLELLNDPNDVAEVTMQPIRRYNVDAAILFSDILVVAEALGIEVTMPGGKGITVPHPLADPADFEARVGTARVDVAKKLSHVITAVSTIKHALKGKVPLIGFSAAPWTLMYYMVGGSSKKNMDVGEKWLREHPQASQALLDLLTQTVIDYMSLQVEAGADMLQVFEAMCDFISEPNFNQWALPCL-QRIAQELRRRHPTVPLLVFTRGASYSSVALQQAGYDIITMDTKTDRKATRAALEADFKAHGSPTGRVSGLQGNFDVKLLQDGTEEQV--REAVAKMLQDLGPQGLIANLGEGLMGKEDPRLVTTFVDAVHEISEQMI 381
BLAST of mRNA_H-paniculata_contig8483.16467.1 vs. uniprot
Match: A0A1L3A3Y0_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Euglenaformis proxima TaxID=299110 RepID=A0A1L3A3Y0_9EUGL) HSP 1 Score: 486 bits (1252), Expect = 1.510e-166 Identity = 249/375 (66.40%), Postives = 297/375 (79.20%), Query Frame = 1
Query: 250 GMSATDEFPLQNDLMIRAARGEKVERTPVWLFRQAGRHLPEYTDYKNLKGKNFLELLQDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQAMGIEVEMPGGKGILVPNPLKDPADFKARIPKE-VDVKDKLSHVIQAVVRIKQELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDFGERWLRDHPEASSNMMDLLTTVIVDYMAAQVEAGADILQVFEAMGGFISEDHFYERAMPYLASRVASELKERCPGVPLMVFARGATYANVALQAAGYDVVTLDTETGRKATRDALAEAARESGT---EMAVVQGNFDPRLLTDMSPDSVNVREATAQMMRELGPQKLIANLGEGLMGKENPKCVSAFVDGIHEFSERLI 1362
G S +PLQNDLM+R ARGE VERTPVWLFRQAGRHLPEY YK GKNFLELL+DP DV EVTMQP+RRYN+DAAILFSDILVV QA+GIEVEMPGGKGI VP PL P DF+ R+ VDV +KLSHV+ AV IK LKGKVPLIGFSAAPWTLM+YMVGGSSKKNTD GE+WL+DHP+ S ++D+LTT ++DYM+ QVEAGAD++QVFEAMG FISED+FY+ AMP L R+A+ELK+R P VPL+VF+RGATY++VALQ AGYD++T+DT T RK TR L +G ++ VQGNF+ +LL + + V R T M++ELGPQ LIANLGEGLMGKE+PK VSAF+D +HE SE++I
Sbjct: 10 GKSINQMYPLQNDLMLRVARGETVERTPVWLFRQAGRHLPEYNAYKEDTGKNFLELLEDPKDVTEVTMQPVRRYNVDAAILFSDILVVAQALGIEVEMPGGKGITVPRPLTGPEDFERRVGSVGVDVSNKLSHVLTAVTSIKMALKGKVPLIGFSAAPWTLMYYMVGGSSKKNTDVGEKWLQDHPDGSQALLDVLTTTVIDYMSLQVEAGADMIQVFEAMGEFISEDNFYKWAMPCL-KRIAAELKKRHPAVPLLVFSRGATYSSVALQQAGYDIITMDTATDRKGTRQTLEADFASNGNPNARVSGVQGNFNVQLLQTGTEEQV--RAETLTMLQELGPQHLIANLGEGLMGKEDPKLVSAFIDAVHELSEKMI 381
BLAST of mRNA_H-paniculata_contig8483.16467.1 vs. uniprot
Match: A0A1L3A3Y8_EUGVI (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Euglena viridis TaxID=3040 RepID=A0A1L3A3Y8_EUGVI) HSP 1 Score: 485 bits (1249), Expect = 2.230e-163 Identity = 247/375 (65.87%), Postives = 303/375 (80.80%), Query Frame = 1
Query: 250 GMSATDEFPLQNDLMIRAARGEKVERTPVWLFRQAGRHLPEYTDYKNLKGKNFLELLQDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQAMGIEVEMPGGKGILVPNPLKDPADFKARI-PKEVDVKDKLSHVIQAVVRIKQELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDFGERWLRDHPEASSNMMDLLTTVIVDYMAAQVEAGADILQVFEAMGGFISEDHFYERAMPYLASRVASELKERCPGVPLMVFARGATYANVALQAAGYDVVTLDTETGRKATRDALAEAARESGT---EMAVVQGNFDPRLLTDMSPDSVNVREATAQMMRELGPQKLIANLGEGLMGKENPKCVSAFVDGIHEFSERLI 1362
GMS + +PLQNDLM+R ARGE VERTPVWLFRQAGRHLPEY YK +GKNFLELL DP+DVAEVTMQPIRRYNLDAAILFSDILVV +A+GIEV+MPGGKGI VP+PL P DF R+ K +DV KL+HVI AV IK LKGKVPLIGFSAAPWTLM+YM+GGSSKKNTD GERWL++HP AS +++DLLT +++Y++ QVEAGAD++QVF+AM FISE++FY+ AMP +A R+A+EL++R P VPL+ F RGATY++VALQ AGYD++T+DT+T RKATR AL +G+ + VQGN D LLT + V R+ATAQ++++LGPQ LIANLGEGLMGKE+PK V+ FVD +HE SE++I
Sbjct: 194 GMSIHEMYPLQNDLMLRVARGETVERTPVWLFRQAGRHLPEYNAYKESQGKNFLELLNDPNDVAEVTMQPIRRYNLDAAILFSDILVVVEALGIEVQMPGGKGITVPSPLVSPEDFYNRVGTKRIDVAKKLAHVITAVTTIKHALKGKVPLIGFSAAPWTLMYYMIGGSSKKNTDAGERWLKEHPAASQDLLDLLTDTVIEYLSLQVEAGADMIQVFDAMCDFISEENFYKSAMPCMA-RIATELRKRHPTVPLLAFTRGATYSSVALQQAGYDIITMDTKTDRKATRAALQADFEANGSPTGHITGVQGNLDVALLTTGTEQQV--RDATAQLLQDLGPQGLIANLGEGLMGKEDPKLVATFVDAVHELSEKMI 565
BLAST of mRNA_H-paniculata_contig8483.16467.1 vs. uniprot
Match: A0A1L3A400_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Phacus inflexus TaxID=461210 RepID=A0A1L3A400_9EUGL) HSP 1 Score: 475 bits (1222), Expect = 5.090e-162 Identity = 245/368 (66.58%), Postives = 291/368 (79.08%), Query Frame = 1
Query: 271 FPLQNDLMIRAARGEKVERTPVWLFRQAGRHLPEYTDYKNLKGKNFLELLQDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQAMGIEVEMPGGKGILVPNPLKDPADFKARI-PKEVDVKDKLSHVIQAVVRIKQELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDFGERWLRDHPEASSNMMDLLTTVIVDYMAAQVEAGADILQVFEAMGGFISEDHFYERAMPYLASRVASELKERCPGVPLMVFARGATYANVALQAAGYDVVTLDTETGRKATRDALAEAARESGTEM---AVVQGNFDPRLLTDMSPDSVNVREATAQMMRELGPQKLIANLGEGLMGKENPKCVSAFVDGIHEFSERLI 1362
+PLQNDLM+R ARGEK ERTPVWLFRQAGRHLPEY +YK KNFLELL+DP DVAEVTMQPIRRY +DAAILFSDILVV +A+GI+VEMPGGKGI VP PL DP DF+ R+ +DV L HVI AV IK LKGKVPLIGFSAAPWTLM+YMVGGSSKKN D GERWLRD+PEA+ ++D+LTT ++DYM+ QVEAGAD++QVFEAMG FISE +FY+ AMP L R+A+EL+ R P VPL+VF RGATY++VALQ AGYD++TLDT+T R+ATR AL ++G+ A VQGN D LL D + + V T +M+ ELGPQ LIANLGEGLMGKE+P+ VSAFVD +HE S ++I
Sbjct: 17 YPLQNDLMLRVARGEKAERTPVWLFRQAGRHLPEYNEYKAASKKNFLELLKDPKDVAEVTMQPIRRYAVDAAILFSDILVVAEALGIDVEMPGGKGITVPRPLTDPDDFRRRVGTARIDVAKALGHVITAVTAIKHALKGKVPLIGFSAAPWTLMYYMVGGSSKKNPDAGERWLRDYPEAAQQLLDVLTTTVIDYMSLQVEAGADMIQVFEAMGDFISEANFYQWAMPCL-KRIATELRHRHPTVPLLVFTRGATYSSVALQQAGYDIITLDTKTPRQATRAALRADFEQNGSPSGHPAGVQGNLDVTLLQDGTVEQVQAE--TIRMLEELGPQGLIANLGEGLMGKEDPRLVSAFVDAVHELSAKMI 381
BLAST of mRNA_H-paniculata_contig8483.16467.1 vs. uniprot
Match: A0A1L3A3Z8_9EUGL (Plastid uroporphyrinogen decarboxylase isoform 1 (Fragment) n=1 Tax=Euglena hiemalis TaxID=392896 RepID=A0A1L3A3Z8_9EUGL) HSP 1 Score: 480 bits (1236), Expect = 7.610e-162 Identity = 253/375 (67.47%), Postives = 293/375 (78.13%), Query Frame = 1
Query: 250 GMSATDEFPLQNDLMIRAARGEKVERTPVWLFRQAGRHLPEYTDYKNLKGKNFLELLQDPDDVAEVTMQPIRRYNLDAAILFSDILVVPQAMGIEVEMPGGKGILVPNPLKDPADFKARI-PKEVDVKDKLSHVIQAVVRIKQELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDFGERWLRDHPEASSNMMDLLTTVIVDYMAAQVEAGADILQVFEAMGGFISEDHFYERAMPYLASRVASELKERCPGVPLMVFARGATYANVALQAAGYDVVTLDTETGRKATRDALAEAARESGT---EMAVVQGNFDPRLLTDMSPDSVNVREATAQMMRELGPQKLIANLGEGLMGKENPKCVSAFVDGIHEFSERLI 1362
G D +PLQNDLM+RAARGEKVERTPVWLFRQAGRHLPEY +YK KGKNFLELL DP DVAEVTMQPIRRYN+DAAILFSDILVV +A+GI+VEMPGG GI VP PL DPADF+ RI K +DV L+HV+ AV IK LKGKVPLIGFSAAPWTLM+YMVGGSSKKN GE+WLR++PEAS ++DLLT +V+YM+ QVEAGAD++QVFEAMG FISE FY AMP L R+A EL+ R PGVPL+ FARGATY+ VALQ AGYD+VTLDT+T R+ TR ALA +G+ +A VQGN D LL + V R ATAQM+ +LGPQ LIANLGEGLMGKE+P V+AFVD +H+ S +I
Sbjct: 164 GSRLNDLYPLQNDLMLRAARGEKVERTPVWLFRQAGRHLPEYNEYKAAKGKNFLELLNDPLDVAEVTMQPIRRYNVDAAILFSDILVVAEALGIQVEMPGGTGITVPRPLVDPADFEQRIGSKRIDVSKSLAHVLTAVTTIKHTLKGKVPLIGFSAAPWTLMYYMVGGSSKKNQGIGEQWLREYPEASQALLDLLTDTVVEYMSLQVEAGADMIQVFEAMGDFISEPDFYVWAMPCL-KRIAIELRRRHPGVPLLAFARGATYSTVALQQAGYDIVTLDTKTDRRGTRAALASDFAANGSPSGHVAGVQGNLDVALLQHGTVKQV--RAATAQMLEDLGPQGLIANLGEGLMGKEDPTLVAAFVDAVHDISTEMI 535 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8483.16467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8483.16467.1 >prot_H-paniculata_contig8483.16467.1 ID=prot_H-paniculata_contig8483.16467.1|Name=mRNA_H-paniculata_contig8483.16467.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=436bp MVSRSVANIVPLLLVAWLAPSPSSGFVLNSGLAVRTLIESTRQVKHEMGMback to top mRNA from alignment at H-paniculata_contig8483:4238..9373- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8483.16467.1 ID=mRNA_H-paniculata_contig8483.16467.1|Name=mRNA_H-paniculata_contig8483.16467.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5136bp|location=Sequence derived from alignment at H-paniculata_contig8483:4238..9373- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8483:4238..9373- >mRNA_H-paniculata_contig8483.16467.1 ID=mRNA_H-paniculata_contig8483.16467.1|Name=mRNA_H-paniculata_contig8483.16467.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2616bp|location=Sequence derived from alignment at H-paniculata_contig8483:4238..9373- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |