mRNA_H-paniculata_contig8468.16458.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8468.16458.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 206 bits (525), Expect = 4.530e-60 Identity = 98/224 (43.75%), Postives = 139/224 (62.05%), Query Frame = 2
Query: 593 PTLAYEATVDHWGQVLGMTKEIAGAVNDKSIVRFDKTVQAVRDGEPYRSMAYKLCDKDGVEQVEKVVYLIVDGGYHRWRSLVCPAKEAATREELAWSKYLESVRKNVECIFGILKGRFRILKLPIIFRESAQVDTVVWTCCILHNMLHSFDGLKLHEPDMDWAGPDGHIDAWLHDDRTMNFGINGRISSGPPERVDVEDGFFAMRRKLVSHYTNRVENNEVAWL 1264
PT+AY+ TVDH +VL +T G+ NDKSI+R+D V +R+ Y + + + DG K YL+VD GYH+W +L+ P+K + +LA+SK LESVRK+VEC FGI+KG FRILKL I + + +D V +TCCILHNMLHS+D E + +WAG G +AW H+ + + SS E V+VE GF R++L++ + R N++AWL
Sbjct: 17 PTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 240
BLAST of mRNA_H-paniculata_contig8468.16458.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 209 bits (532), Expect = 2.980e-58 Identity = 99/224 (44.20%), Postives = 140/224 (62.50%), Query Frame = 2
Query: 593 PTLAYEATVDHWGQVLGMTKEIAGAVNDKSIVRFDKTVQAVRDGEPYRSMAYKLCDKDGVEQVEKVVYLIVDGGYHRWRSLVCPAKEAATREELAWSKYLESVRKNVECIFGILKGRFRILKLPIIFRESAQVDTVVWTCCILHNMLHSFDGLKLHEPDMDWAGPDGHIDAWLHDDRTMNFGINGRISSGPPERVDVEDGFFAMRRKLVSHYTNRVENNEVAWL 1264
PT+AY+ TVDH +VL +T G+ NDKSI+R+D V +R+ Y + + + DG K YL+VD GYH+W +L+ P+K + +LA+SK LESVRK+VEC FGI+KGRFRILKL I + + +D V +TCCILHNMLHS+D E + +WAG G +AW H+ + + SS E V+VE GF R++L++ + R N++AWL
Sbjct: 258 PTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 481
BLAST of mRNA_H-paniculata_contig8468.16458.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 201 bits (512), Expect = 6.220e-58 Identity = 97/237 (40.93%), Postives = 141/237 (59.49%), Query Frame = 2
Query: 593 PTLAYEATVDHWGQVLGMTKEIAGAVNDKSIVRFDKTVQAVRDGEPYRSMAYKLCDKDGVEQVEKVVYLIVDGGYHRWRSLVCPAKEAATREELAWSKYLESVRKNVECIFGILKGRFRILKLPIIFRESAQVDTVVWTCCILHNMLHSFDGLKLHEPDMDWAGPDGHIDAWLHDDRTMNFGINGR-ISSGPPERVDVEDG------------FFAMRRKLVSHYTNRVENNEVAWL 1264
PT+AYE TVDH G+ L +T GA NDK+I+R+D V +R Y YKL +G E+ + +LI+D YH W +L+ P+K + ++ A+S++LESVRK+VEC FGILKGRFRILKL + + + +D + +TCCILHNMLH+FDGL + + + DW G GH DAW HD T + + + P E + E G ++R+L+ + R + N++ WL
Sbjct: 17 PTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 253
BLAST of mRNA_H-paniculata_contig8468.16458.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 204 bits (519), Expect = 3.760e-57 Identity = 106/225 (47.11%), Postives = 140/225 (62.22%), Query Frame = 2
Query: 593 PTLAYEATVDHWGQVLGMTKEIAGAVNDKSIVRFDKTVQAVRDGEPYRSMAYKLCDKDGVEQVEKVVYLIVDGGYHRWRSLVCPAKEAATREELAWSKYLESVRKNVECIFGILKGRFRILKLPIIFRESAQVDTVVWTCCILHNMLHSFDGLKLHEPDMDWAGPDGHIDAWLHDDRTMNFGINGRISSGPPERVDVEDGFFAMRRKLVSHYTNRVENN-EVAWL 1264
PT+A++ TVDH G+VL +T+ GA NDK+I+R+DK V +R Y YKL +DG + EK YL+VD GYH+WR+L+ P+K R +L +SK LES RK+VEC FGILKGRFRI KL I F + +D V +TCCILHNMLHSFD + +WAG G +A D T + G E V+VE GF A+R KLV+++ R E ++ WL
Sbjct: 183 PTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSM--DGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405
BLAST of mRNA_H-paniculata_contig8468.16458.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 204 bits (519), Expect = 3.210e-56 Identity = 106/225 (47.11%), Postives = 140/225 (62.22%), Query Frame = 2
Query: 593 PTLAYEATVDHWGQVLGMTKEIAGAVNDKSIVRFDKTVQAVRDGEPYRSMAYKLCDKDGVEQVEKVVYLIVDGGYHRWRSLVCPAKEAATREELAWSKYLESVRKNVECIFGILKGRFRILKLPIIFRESAQVDTVVWTCCILHNMLHSFDGLKLHEPDMDWAGPDGHIDAWLHDDRTMNFGINGRISSGPPERVDVEDGFFAMRRKLVSHYTNRVENN-EVAWL 1264
PT+A++ TVDH G+VL +T+ GA NDK+I+R+DK V +R Y YKL +DG + EK YL+VD GYH+WR+L+ P+K R +L +SK LES RK+VEC FGILKGRFRI KL I F + +D V +TCCILHNMLHSFD + +WAG G +A D T + G E V+VE GF A+R KLV+++ R E ++ WL
Sbjct: 274 PTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSM--DGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 496
BLAST of mRNA_H-paniculata_contig8468.16458.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 191 bits (484), Expect = 1.150e-51 Identity = 97/225 (43.11%), Postives = 139/225 (61.78%), Query Frame = 2
Query: 596 TLAYEATVDHWGQVLGMTKEIAGAVNDKSIVRFDKTVQAVRDGEPYRSMAYKLCDKDGVEQVEKVVYLIVDGGYHRWRSLVCPAKEAATREELAWSKYLESVRKNVECIFGILKGRFRILKLPIIFRESAQVDTVVWTCCILHNMLHSFDGLKLHEPDMDWAGPDGHIDAWLHDDRTMNFGINGRISSGPPERVDVEDGFFAMRRKLVSHYTNRVENNEVAWLRS 1270
T+A+E DH + LG++K GA+NDK+IV FD+ V+ ++ + + + L +DG E E+ +YLIVDGGYH+ CP + T++ELA+ K LESVRK++EC FGILKGRFRILK+P+++R ++D + TCC LHNMLHS+DGL L E D +WAG DG +D W+ + N P+ ED F ++ KLV++ + V W RS
Sbjct: 233 TVAFEVVCDHKLRCLGVSKAFPGAMNDKTIVMFDEYVRRIKT--ECKDVPFTLLGEDGSEFEERGLYLIVDGGYHK-----CPVQFPVTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWVTTPEAESAADNS------PDLHLFEDDFKDLQGKLVTNLAEMKKRGTVGWRRS 444
BLAST of mRNA_H-paniculata_contig8468.16458.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 189 bits (480), Expect = 5.340e-51 Identity = 96/227 (42.29%), Postives = 140/227 (61.67%), Query Frame = 2
Query: 596 TLAYEATVDHWGQVLGMTKEIAGAVNDKSIVRFDKTVQAVRDGEPYRSMAYKLCDKDGVEQVEKVVYLIVDGGYHRWRSLVCPAKEAATREELAWSKYLESVRKNVECIFGILKGRFRILKLPIIFRESAQVDTVVWTCCILHNMLHSFDGLKLHEPDMDWAGPDGHIDAWLHDDRTMNFGINGRISSGPPER--VDVEDGFFAMRRKLVSHYTNRVENNEVAWLRS 1270
TL + V H +VL T+ GA NDK+I++FDK AVR+G Y+ + Y L +DG + EK +LIVDGGYH W+ L P + + + E + + LESVRK+ EC FG++KGRFRI K+ ++R+ ++D + +TC ILHNML ++DG++L EPD DWAG DG +D + R+S+ E V+ +DGF A+R+KLV+++ R V W RS
Sbjct: 235 TLVFNVAVSHDMRVLSCTRGFPGAQNDKTIIKFDKFAMAVRNGW-YKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVV-------RMSAPTHEDAVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 453
BLAST of mRNA_H-paniculata_contig8468.16458.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 181 bits (460), Expect = 5.720e-49 Identity = 92/237 (38.82%), Postives = 134/237 (56.54%), Query Frame = 2
Query: 593 PTLAYEATVDHWGQVLGMTKEIAGAVNDKSIVRFDKTVQAVRDGEPYRSMAYKLCDKDGVEQVEKVVYLIVDGGYHRWRSLVCPAKEAATREELAWSKYLESVRKNVECIFGILKGRFRILKLPIIFRESAQVDTVVWTCCILHNMLHSFDGLKLHEPDMDWAGPDGHIDAWLHDDRTMNFGINGRISSGPP---ERVDVEDGFFA----------MRRKLVSHYTNRVENNEVAWL 1264
PT+AY+ TVDH G+ L +T GA NDK+I+R+D V +R Y YKL +G +++ + +LIVD GYH W +L+ P+K E+ A+S+ LESVRK+V C FRILKL + + + VD + +TCCILHNMLH+FDGL + E + DW G GH DAW HD T + + PP E+ + +G ++R+L+ + R + N++ WL
Sbjct: 136 PTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGC--------FRILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 364
BLAST of mRNA_H-paniculata_contig8468.16458.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 181 bits (460), Expect = 2.200e-48 Identity = 95/213 (44.60%), Postives = 127/213 (59.62%), Query Frame = 2
Query: 596 TLAYEATVDHWGQVLGMTKEIAGAVNDKSIVRFDKTVQAVRDGEPYRSMAYKLCDKDGVEQVEKVVYLIVDGGYHRWRSLVCPAKEAATREELAWSKYLESVRKNVECIFGILKGRFRILKLPIIFRESAQVDTVVWTCCILHNMLHSFDGLKLHEPDMDWAGPDGHIDAWLHDDRTMNFGINGRISSGPPERVDVEDG---FFAMRRKLVSH 1225
TL YEA+ DH G++L TK GA NDK++V+ D +V +R+ EP+ S + L D +G +LIVDGGYHR SL+CP KE A+ + WSK ES+RK++EC+FG LKGRFR+ K I+F ++D +T CI+HNMLH FDGL E D+DWAG DG D T F + + E VD D F R++LV+H
Sbjct: 213 TLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDGEADQ-----TTGAFPVPTAVVDTAGEEVDDGDNTEAFKLFRQQLVNH 420
BLAST of mRNA_H-paniculata_contig8468.16458.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 177 bits (448), Expect = 2.220e-46 Identity = 91/230 (39.57%), Postives = 139/230 (60.43%), Query Frame = 2
Query: 593 PTLAYEATVDHWGQVLGMTKEIAGAVNDKSIVRFDKTVQAVRDGEPYRSMAYKLCDKDGVEQVEKVVYLIVDGGYHRWRSLVCPAKEAATREELAWSKYLESVRKNVECIFGILKGRFRILKLPIIFRESAQVDTVVWTCCILHNMLHSFDGLKLHEPDMDWAGPDGHIDAWLHDDRTMNFGINGRISSGPPERVDVEDGFFAMRRKLVSHYTNRVENN-EVAWL-RSQP 1276
PT+ Y+ TV+H G+VL +T+ G+ NDK+I+ D+ V +R + Y + + KDG + K YLIVD GYH+WR L+ P+K + +L +SK LESVRK+VEC FGILK RFRILKL + +++ ++D V +TCCILHNMLH+ DG+ E D++W G A L + N + + ++ VE ++RKL +++ R ++ ++ WL R +P
Sbjct: 229 PTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGS-----AELQNTSGHNLDSSSVGTKDLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWLSRKRP 453 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8468.16458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8468.16458.1 >prot_H-paniculata_contig8468.16458.1 ID=prot_H-paniculata_contig8468.16458.1|Name=mRNA_H-paniculata_contig8468.16458.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=215bp MTKEIAGAVNDKSIVRFDKTVQAVRDGEPYRSMAYKLCDKDGVEQVEKVVback to top mRNA from alignment at H-paniculata_contig8468:4573..7883+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8468.16458.1 ID=mRNA_H-paniculata_contig8468.16458.1|Name=mRNA_H-paniculata_contig8468.16458.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3311bp|location=Sequence derived from alignment at H-paniculata_contig8468:4573..7883+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8468:4573..7883+ >mRNA_H-paniculata_contig8468.16458.1 ID=mRNA_H-paniculata_contig8468.16458.1|Name=mRNA_H-paniculata_contig8468.16458.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1290bp|location=Sequence derived from alignment at H-paniculata_contig8468:4573..7883+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |