mRNA_H-paniculata_contig8437.16434.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8437.16434.1
Unique NamemRNA_H-paniculata_contig8437.16434.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig8437.16434.1 vs. uniprot
Match: D8LD11_ECTSI (PPR_long domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD11_ECTSI)

HSP 1 Score: 384 bits (985), Expect = 2.280e-117
Identity = 281/729 (38.55%), Postives = 359/729 (49.25%), Query Frame = 2 
Query:  479 LPDSPKARQKAFNIHLMQFVKAGDAEGALRLYGAVRELRCHATEGMFNAVLSLCGDGTTICRGKRVLSDMEAAGFMPKENSYSFLLREAAGRGAFDEAFSILRDMTQRGVAPRLRSYAPVLRGLCDEASATAGASTPDMSLAVEVWSHMREHGVQPLEQDYLLMIKGWAQSKQLWGRVRDSSVERLLRELSNSAFELSPA----------NHVEPVRNTTNATIPFLDTLLEAFNCNSG-----SDTAT--PAIARIASVSPRPGEGGAFCDCCGGRLGAVGLSDDERLRVRSALKSLAAESLLHGQAGGGAAAAVDPAEEGSEGNGGAREREEVVEETERSEVVEGLGDRPRKRGRPVALTAPIGGLDHFAGWLEERQREPSGGFTTVIDGCNIAYYGQNVEGGHVRMLQVDQVVKMLEAESERVLVVFPDRYLRTVVVNSSRFKGVKNAPTKLSSDALKAIEEWEERGMLYRCANGADDDLFWMYFTVASD-----GAVAPNCVNGNISVSE----CTVANDRVVDGSDRCATSITPGGNFVASRVEDGRLAVNREGTNGSSSGGGRMEEVLNGGIKNGINTVASTDCVTSTRLTVVSNDEMRNHRMALLEPVPFRRWRNSQVRGFHLQPMVRN------MSTATNDDSREEGSAQDNDQQSELSDRAP-----PRKPVVLGVPSFTRDMQVVDR-AWHIPIMQDTPGVTGSKWLCINLTAGLHQDE 2551
            LP SP+ RQKAF+  ++  VKAGDA+ AL LYG   E+ C  +E +FNAVLS       +  G RVLSDM  AG  P+EN Y+FLLREAA RGAF+EAFS +R+                                              EH         + MIKGWA + +L  RV D SVER L++L+   FEL P           +HV    ++  +    L TLL AFN +S      SD  T   +  R+ASVS      G  CDCCG  L  VGL  + R RVRSAL  LA+E+                  + S                + +   EG G+  R+      L   +G L+ FA WLEER+RE    FTTV+DGCN+AYYGQN EGG   + QVD + + LE + ERVLV+ P+RYLR  V NS+R +  KN  + LS + L+ I+ W  R MLY CANG DDDLFWMYFTV+SD     G       +G   + E       +N   VDG        TP G F     ++ RL    EG               + G  +G+          + RLTVVSNDEMRNHRMALLEPVPF+RWR SQVRGFH   ++ N       +++T                     R P     P  P+V   P+FTRDMQV+++ AWHIPI +   G  G+KWLCINL A + ++E
Sbjct:   25 LPQSPRKRQKAFSTMVVNSVKAGDADRALLLYGKAAEVGCMISETVFNAVLS-------VSNGVRVLSDMVEAGIKPRENHYAFLLREAASRGAFEEAFSQVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPEEH---------IDMIKGWAAAGELRPRVADGSVERCLQQLAGMDFELIPCRDAGAAASCDDHVSG--SSAGSGDHHLQTLLSAFNADSNFVSSESDVQTYFSSPPRVASVSSASLASGGVCDCCGAALKVVGLDPEARARVRSALVKLASETAYPTPXXXXXXXXXXXXXQSSR--------------LDYAYAGEGQGEMDRR-----GLGEAMGDLERFAAWLEERRREGVH-FTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQLERDGERVLVILPERYLRPCVPNSARSRRGKNPSSALSDEDLETIDRWRRRQMLYSCANGTDDDLFWMYFTVSSDATAIEGEEEVTNGDGGAGLRENRQGYKPSNSNGVDGIYVGRQEATPRGGFAGGDDDETRLGGTGEGVGQXXXXXXXXXXXXSSG--DGL----------AGRLTVVSNDEMRNHRMALLEPVPFKRWRKSQVRGFHFPAILPNDGSRGSSASSTXXXXXXXXXXXXXXXXXXXRHRPPEQGSSPPLPIVCPSPAFTRDMQVLNKHAWHIPIGEGQDGEPGTKWLCINLAALVEEEE 703
[Close]
BLAST of mRNA_H-paniculata_contig8437.16434.1 vs. uniprot
Match: A0A835ZAC6_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC6_9STRA)

HSP 1 Score: 234 bits (596), Expect = 9.990e-64
Identity = 184/619 (29.73%), Postives = 251/619 (40.55%), Query Frame = 2 
Query:  491 PKARQKAFNIHLMQFVKAGDAEGALRLYGAVRELRCHATEGMFNAVLSLCGDGTTICRGKRVLSDMEAAGFMPKENSYSFLLREAAGRGAFDEAFSILRDMTQRGVAPRLRSYAPVLRGLCDEASATAGASTPDMSLAVEVWSHMREHGVQPLEQDYLLMIKGWAQSKQLWGRVRDSSVERLLRELSNSAFELSPANHVEPVRNTTNATIPFLDTLLEAFNCNSGSDTATPAIARIASVSPRPGEGGAFCDCCGGRLGAVGLSDDERLRVRSALKSLAAESLLHGQAGGGAAAAVDPAEEGSEGNGGAREREEVVEETERSEVVEGLGDRPRKRGRPVALTAPIGGLDHFAGWLEERQREPSGGFTTVIDGCNIAYYGQNVEGGHVRMLQVDQVVKMLEAESERVLVVFPDRYLRTVVVNSSRFKGVKNAPTKLSSDALKAIEEWEERGMLYR-------------------CANGADDDLFWMYFTVASDGAVAPNCVNGNISVSECTVANDRVVDGSDRCATSITPGGNFVASRVEDGRLAVNREGTNGSSSGGGRMEEVLNGGIKNGINTVASTDCVTSTRLTVVSNDEMRNHRMALLEPVPFRRWRNSQVRGFHL 2290
            PK   +  +  L+  +KA D +GA+ LY AVR+       G++N V++LCG+ + +  G ++   M  AG +P+ENSY+FL+RE A RGAF                        +L+GLC         + PDM++A  VW+HM+  GV      Y+ M++G + S  LW  V    V+ LL ELS   FEL                   ++ L +AFN       A+        VS   G  G+ C  C   L A+GL+  ER +VR AL+ +A E                PA      NG A+                                     L +FA WL ER +     FT V+D  N+AY+ QN  GG  +M QVD VV+ LEA  ERVLVV P+RYLR ++ NS+RF  ++   T LS  AL  I  WEE+G+LYR                   CAN  +DD +WMY TVA D   AP                                                                                        +TVVSND MR+HR+ALLEP PF RW+ +Q   ++ 
Sbjct:   26 PKEEWRVLHRGLVATLKAADGDGAVALYMAVRKRGYTVPRGIYNGVINLCGNSSRVAVGLQIFEHMREAGHLPQENSYAFLVRERASRGAFXXXXXXXXXXXXXXXXXXXXXXXXLLQGLC---------AVPDMTMAWRVWAHMKGQGVVATPDLYVTMLRGASLSGDLWSMVATGEVDALLAELSYEVFELDG---------------DLIEQLQQAFNAGLQEPVAS-------MVSVESGGKGS-CPACTSHLKAIGLTPREREKVRRALRVMATEKF--------------PA------NGSAK-------------ASSAXXXXXXXXXXXXXXXXXADTLLNFAQWLRERAK-----FTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAIIPNSTRFARLQRKRTVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAFDNVAAP----------------------------------------------------------------------------------------VTVVSNDLMRDHRLALLEPTPFVRWKRTQQMRYYF 486
[Close]
BLAST of mRNA_H-paniculata_contig8437.16434.1 vs. uniprot
Match: A0A7R9YCU0_9STRA (Ribonuclease P n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCU0_9STRA)

HSP 1 Score: 106 bits (264), Expect = 7.040e-20
Identity = 98/326 (30.06%), Postives = 142/326 (43.56%), Query Frame = 2 
Query: 1538 FAGWLEERQREPSGGFTTVIDGCNIAYYGQNVEGGHVRMLQVDQVVKMLEAESERVLVVFPDRYLRTVVVNSSRFKGVKNAPTK-LSSDALKAIEEWEERGMLYRCANGADDDLFWMYFTVASD-GAVAPNCVNGNISVSECTVANDRVVDGSDRCATSITPGGNFVASRVEDGRLAVNREGTNGSSSGGGRME-------EVLNGGIKNGINTVASTDCVTSTRLTVVSNDEMRNHRMALLEPVPFRRWRNSQVRGFHL-QPMVRNMSTATNDDSREEGSAQDNDQQSELSDRAPPRKPVVLGVPSFTRDMQVVDRAWHIPIMQD 2485
            F+ W+ E  R     F  V+DG N+AY  QN+  G   ++Q+  V + LE     VLV+ P RY  + V N+ RF+  +N     LS+D ++ +  WEE G LY    G  DD  WM  TVA +  AV  +  +G    S+ T   D                       + + +L+VN++       G GR +           G  +      A+    T T+  V+SND MRNHR  LL    F RWR SQV  F L +P++++                           AP  + VV   P F+R++Q+VD  WHIP+  D
Sbjct:  337 FSRWMRENARRGVY-FDYVLDGANVAYTKQNMGPGRFNVIQIALVKQHLEDAGANVLVLLPQRYCNSRVPNTIRFENRRNTHMNDLSADEVELLRAWEEAGQLYVVDTGTHDDYLWMLATVAVEQDAVQLSTRDGQ---SKWTAPFD-----------------------ICNPKLSVNKD------RGFGRRDVATMKALRATRGESEQPEKPAAAPPKRTLTK--VLSNDRMRNHRKWLLSSRDFLRWRYSQVVHFDLSRPVMKD---------------------------APLPEVVVYEPPPFSREIQIVDGHWHIPLAPD 600
[Close]
BLAST of mRNA_H-paniculata_contig8437.16434.1 vs. uniprot
Match: A0A7S4QEE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QEE3_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.690e-15
Identity = 71/255 (27.84%), Postives = 110/255 (43.14%), Query Frame = 2 
Query: 1529 LDHFAGWLEERQREPSGGFTTVIDGCNIAYYGQNVEGGHVRMLQVDQVVKMLEAESERVLVVFPDRYLRTVVVNSSRFKGVKNAPTKLSSDALKAIEEWEERGMLYRCANGADDDLFWMYFTVASDGAVAPNCVNGNISVSECTVANDRVVDGSDRCATSITPGGNFVASRVEDGRLAVNREGTNGSSSGGGRMEEVLNGGIKNGINTVASTDCVTSTRLTVVSNDEMRNHRMALLEPVPFRRWRNSQVRGFHLQ 2293
            L +F  W+  R+ EP   FT ++DG N+AY+GQ    GHV  LQ+  +V+ LE  +E  LV+ P +Y  +    SS+F        KL+ + L+ IE +EE+G L++      DD +WM  +V SD  V+ N  N ++                                  +DGR                        GI                R  ++SND+MR+H++ LLEP  FRRW +S +  + ++
Sbjct:   49 LSNFVDWVNTREGEP---FTAIVDGANVAYFGQ----GHVDYLQLKLMVETLENMNENPLVIMPQKYTNSKFRVSSKFL------QKLTPEDLEIIEGFEEKGQLFKVPALCLDDYYWMLASV-SDQTVSRNGTNIDVPTDN------------------------------DDGRWP----------------------GI----------------RPMLISNDQMRDHKLELLEPRLFRRWCSSHIVNYSVK 221
[Close]
BLAST of mRNA_H-paniculata_contig8437.16434.1 vs. uniprot
Match: A0A7S1P5T6_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1P5T6_9ALVE)

HSP 1 Score: 85.1 bits (209), Expect = 1.820e-13
Identity = 76/291 (26.12%), Postives = 116/291 (39.86%), Query Frame = 2 
Query:  488 SPKARQKAFNIHLMQFVKAGDAEGALRLYGAVRELRC---------HATEGMFNAVLSLCGDGTTICRGKRVLSDMEAAGFMPKENSYSFLLREAAGRGAFDEAFSILRDMTQRGVAPRLRSYAPVLRGLCDEASATAGASTPDMSLAVEVWSHMREHGVQPLEQDYLLMIKGWAQSKQLWGRVRDSSVERLLRELSNSAFELSPANHVEPVRNTTNATIPFLDTLLEAFNCNSGSDTATPAIARIASVSPRPGEGGAFCDCCGGRLGAVGLSDDERLRVRSALKSLAAES 1333
            +P  RQ  +   +++  + GD +GA+ L     E R          +     +  +L++C     I R   V S M  A     E  Y  L+R  A      EAF I   M Q+G+AP+LR+Y P+L GLC +          D+    ++  HM+   + P  ++ LL ++       L+    D+  +  +  L N   E +   HV    +      P      E      G +    A ARI S+         +C  CG RL  V L   E  R+R A+  LAA S
Sbjct:  196 APDERQPQYVPEIIRLARNGDIDGAMELLERYEESRVKRVGDRVHLNVNRDCYTVLLNVCALDHDITRTLTVYSKMVNANLDLTEPDYVALIRAYAKNSQLKEAFQIALSMIQQGIAPKLRTYNPILEGLCSQG---------DLDGIFDLLQHMKHQALFPAHEEILLTLRTLKDHGLLFSG--DALWQERVNFLMNLLIEETSDLHVRVAEDFVRELAPTAPR--EGATSTGGQEPPPRAAARIVSIED------GWCPACGERLETVRLDSREGRRLRLAVLKLAALS 467
[Close]
BLAST of mRNA_H-paniculata_contig8437.16434.1 vs. uniprot
Match: A0A7S2EEA5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EEA5_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.300e-13
Identity = 70/255 (27.45%), Postives = 109/255 (42.75%), Query Frame = 2 
Query: 1529 LDHFAGWLEERQREPSGGFTTVIDGCNIAYYGQNVEGGHVRMLQVDQVVKMLEAESERVLVVFPDRYLRTVVVNSSRFKGVKNAPTKLSSDALKAIEEWEERGMLYRCANGADDDLFWMYFTVASDGAVAPNCVNGNISVSECTVANDRVVDGSDRCATSITPGGNFVASRVEDGRLAVNREGTNGSSSGGGRMEEVLNGGIKNGINTVASTDCVTSTRLTVVSNDEMRNHRMALLEPVPFRRWRNSQVRGFHLQ 2293
            L +F  W+  R+ EP   FT ++DG N+AY+GQ    GHV  LQ+  +V+ LE  +E  LV+ P +Y  +    SS+F        KL+ + L+ IE +E +G L++      DD +WM  +V SD  V+ N  N ++                                  +DGR                        GI                R  ++SND+MR+H++ LLEP  FRRW +S +  + ++
Sbjct:  477 LSNFVDWVNTREGEP---FTAIVDGANVAYFGQ----GHVDYLQLKLMVETLENMNENPLVIMPQKYTNSKFRVSSKFL------QKLTPEDLEIIEGFEAKGQLFKVPALCLDDYYWMLASV-SDQTVSRNGTNIDVPTDN------------------------------DDGRWP----------------------GI----------------RPMLISNDQMRDHKLELLEPRLFRRWCSSHIVNYSVK 649
[Close]
BLAST of mRNA_H-paniculata_contig8437.16434.1 vs. uniprot
Match: A0A7S0CK07_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CK07_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.070e-8
Identity = 66/261 (25.29%), Postives = 104/261 (39.85%), Query Frame = 2 
Query: 1529 LDHFAGWLEERQREPSGGFTTVIDGCNIAYYGQNVEGGHVRMLQVDQVVKMLEAESERVLVVFPDRY-LRTVVVNSSRFKGVKNAPTKLSSDALKAIEEWEERGMLYRCANGADDDLFWMYFTVASDGAVAPNCVNGNISVSECTVANDRVVDGSDRCATSITPGGNFVASRVEDGRLAVNREGTNGSSSGGGRMEEVLNGGIKNGINTVASTDCVTSTRLTVVSNDEMRNHRMALLEPVPFRRWRNSQVRGFHLQPMVRN 2308
            L  FA WL  R+ EP   FT ++DG N+AY GQN E G     Q+  +   L +  E  LV+ P +Y ++T   N+    G +     L+      + ++ + G LYR      DD +WM  +V+    + P    G                                   V+   ++ N EG     S              N IN    T+    TR  +++ND+MR+H++ LL+   FRRW +  +  ++    V N
Sbjct:  245 LSTFADWLNVRKGEP---FTAIVDGANVAYSGQNFEQGRFNYHQIKFLTDALISMGENPLVIVPYKYTMKTFHTNN----GAQKRRQILNDVEQDILFDFRDDGRLYRVPARCLDDYYWMLASVSDQ--LKPTGGKG-----------------------------------VDMLHVSPNIEGNETDKS-------------SNNIN----TERFPGTRPMLITNDQMRDHKLELLDTRLFRRWTSCHIVNYNFTAFVGN 444
[Close]
BLAST of mRNA_H-paniculata_contig8437.16434.1 vs. uniprot
Match: A0A485KSQ4_9STRA (Ribonuclease P n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSQ4_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.850e-8
Identity = 35/126 (27.78%), Postives = 58/126 (46.03%), Query Frame = 2 
Query: 1532 DHFAGWLEERQREPSGGFTTVIDGCNIAYYGQNVEGGHVRMLQVDQVVKMLEAESERVLVVFPDRYLRTVVVNSSRFKGVKNAPTKLSSDALKAIEEWEERGMLYRCANGADDDLFWMYFTVASDG 1909
            + F  WLE       G F  +ID  N+ Y+ QN EGG     Q++ V+K  EA+ ++ L+V   R               +    ++       + +W+ERG+++ C  G +DD +W+Y  V   G
Sbjct:  266 NEFKQWLEAH-----GPFDVLIDAANVGYFAQNFEGGGFNYKQIETVLKAYEAKGKKTLIVLHKR---------------RTKDHQVPEHHRAMVAQWKERGVMFNCLPGNNDDWYWLYAAVKFSG 371
[Close]
BLAST of mRNA_H-paniculata_contig8437.16434.1 vs. uniprot
Match: A0A022RHM6_ERYGU (Ribonuclease P n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RHM6_ERYGU)

HSP 1 Score: 65.9 bits (159), Expect = 2.230e-7
Identity = 56/208 (26.92%), Postives = 91/208 (43.75%), Query Frame = 2 
Query:  494 KARQKA----FNIHLMQFVKAGDAEGALRLYGAVRELRCHATEGMFNAVLSLC-----------GDGTTICRGKRVLSDMEAAGFMPKENSYSFLLREAAGRGAFDEAFSILRDMTQRGVAPRLRSYAPVLRGLCDEASATAGASTPDMSLAVEVWSHMREHGVQPLEQDYLLMIKGWAQSKQLWGRVRDSSVERLLRELSNSAFELS 1072
            KAR++A      + L    K G+   AL LY   R          +N +L LC           G+ T + RG  +   M      P E +++ L R AA +     AF +++ MT+ G+ P+LRSY P L G C +  A           A EV  HMR++GV P E +   +++  ++ K      ++  V  ++  L  +  ++S
Sbjct:    5 KARREAPEMILRVKLDLCSKDGNLTEALCLYNEARANGVQLNVHHYNVLLYLCCPNRDLSKEDEGNLTMLDRGFEIFKQMGIDKVEPNEATFTNLSRLAAAKEDPRLAFDLVKQMTEHGIVPKLRSYGPALFGFCKKGMADE---------AYEVDFHMRDNGVLPEETELTALLRVSSEFK------KEGKVYEMIHRLRTTVRQVS 197
[Close]
BLAST of mRNA_H-paniculata_contig8437.16434.1 vs. uniprot
Match: A0A0A0LY34_CUCSA (PPR_long domain-containing protein n=1 Tax=Cucumis sativus TaxID=3659 RepID=A0A0A0LY34_CUCSA)

HSP 1 Score: 62.8 bits (151), Expect = 1.500e-6
Identity = 51/180 (28.33%), Postives = 76/180 (42.22%), Query Frame = 2 
Query:  476 ALPDSPKARQKAFNIHLMQFVKAGDAEGALRLYGAVRELRCHATEGMFNAVLSLCGD-------------GTTICRGKRVLSDMEAAGFMPKENSYSFLLREAAGRGAFDEAFSILRDMTQRGVAPRLRSYAPVLRGLCDEASATAGASTPDMSLAVEVWSHMREHGVQPLEQDYLLMIK 976
            AL ++P++  K +N+ +    K G    AL LY   R       +  +N +L LC                  + RG  +   M      P E +++ L R AA R   + AFS+++ M    +APRLRSY P L G C +              A EV SHM    V+P E +   ++K
Sbjct:   91 ALKEAPESVLK-YNLDMCS--KYGQVVKALELYDEARSNGIQLNQHHYNVLLYLCSSPSLLETSGANNLSSVVLSRGFEIFQQMMTDKVSPNEATFTSLARIAAARDDPEMAFSLVKQMKDYHIAPRLRSYGPALFGFCRKLMPKE---------AYEVDSHMLASAVEPEELELSALLK 258
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8437.16434.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LD11_ECTSI2.280e-11738.55PPR_long domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZAC6_9STRA9.990e-6429.73Ribonuclease P n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7R9YCU0_9STRA7.040e-2030.06Ribonuclease P n=1 Tax=Pinguiococcus pyrenoidosus ... [more]
A0A7S4QEE3_9STRA3.690e-1527.84Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S1P5T6_9ALVE1.820e-1326.12Hypothetical protein (Fragment) n=1 Tax=Vitrella b... [more]
A0A7S2EEA5_9STRA3.300e-1327.45Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S0CK07_9STRA1.070e-825.29Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A485KSQ4_9STRA4.850e-827.78Ribonuclease P n=1 Tax=Aphanomyces stellatus TaxID... [more]
A0A022RHM6_ERYGU2.230e-726.92Ribonuclease P n=2 Tax=Erythranthe guttata TaxID=4... [more]
A0A0A0LY34_CUCSA1.500e-628.33PPR_long domain-containing protein n=1 Tax=Cucumis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8437contigH-paniculata_contig8437:744..8951 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.8
Seed ortholog evalue3.2e-105
Seed eggNOG ortholog2880.D8LD11
KEGG koko:K22390
Hectar predicted targeting categoryother localisation
EggNOG free text desc.endonuclease activity
EggNOG OGsKOG4197@1,KOG4197@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_001860.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons10
Model size2728
Cds size2490
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8437.16434.1prot_H-paniculata_contig8437.16434.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8437 868..8837 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931059.103728-UTR-H-paniculata_contig8437:743..8671622931059.103728-UTR-H-paniculata_contig8437:743..867Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8437 744..867 +
1691481571.138828-UTR-H-paniculata_contig8437:743..8671691481571.138828-UTR-H-paniculata_contig8437:743..867Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8437 744..867 +
1622931059.2647398-UTR-H-paniculata_contig8437:8837..89511622931059.2647398-UTR-H-paniculata_contig8437:8837..8951Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8437 8838..8951 +
1691481571.271238-UTR-H-paniculata_contig8437:8837..89511691481571.271238-UTR-H-paniculata_contig8437:8837..8951Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8437 8838..8951 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931059.1166544-CDS-H-paniculata_contig8437:867..13981622931059.1166544-CDS-H-paniculata_contig8437:867..1398Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 868..1398 +
1691481571.150455-CDS-H-paniculata_contig8437:867..13981691481571.150455-CDS-H-paniculata_contig8437:867..1398Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 868..1398 +
1622931059.1294432-CDS-H-paniculata_contig8437:2054..22851622931059.1294432-CDS-H-paniculata_contig8437:2054..2285Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 2055..2285 +
1691481571.1683571-CDS-H-paniculata_contig8437:2054..22851691481571.1683571-CDS-H-paniculata_contig8437:2054..2285Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 2055..2285 +
1622931059.1430914-CDS-H-paniculata_contig8437:2727..29351622931059.1430914-CDS-H-paniculata_contig8437:2727..2935Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 2728..2935 +
1691481571.1848953-CDS-H-paniculata_contig8437:2727..29351691481571.1848953-CDS-H-paniculata_contig8437:2727..2935Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 2728..2935 +
1622931059.1578255-CDS-H-paniculata_contig8437:3951..44271622931059.1578255-CDS-H-paniculata_contig8437:3951..4427Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 3952..4427 +
1691481571.1964252-CDS-H-paniculata_contig8437:3951..44271691481571.1964252-CDS-H-paniculata_contig8437:3951..4427Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 3952..4427 +
1622931059.1744673-CDS-H-paniculata_contig8437:4868..49581622931059.1744673-CDS-H-paniculata_contig8437:4868..4958Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 4869..4958 +
1691481571.207325-CDS-H-paniculata_contig8437:4868..49581691481571.207325-CDS-H-paniculata_contig8437:4868..4958Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 4869..4958 +
1622931059.1887558-CDS-H-paniculata_contig8437:5403..55171622931059.1887558-CDS-H-paniculata_contig8437:5403..5517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 5404..5517 +
1691481571.219938-CDS-H-paniculata_contig8437:5403..55171691481571.219938-CDS-H-paniculata_contig8437:5403..5517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 5404..5517 +
1622931059.2044268-CDS-H-paniculata_contig8437:6067..61411622931059.2044268-CDS-H-paniculata_contig8437:6067..6141Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 6068..6141 +
1691481571.2301712-CDS-H-paniculata_contig8437:6067..61411691481571.2301712-CDS-H-paniculata_contig8437:6067..6141Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 6068..6141 +
1622931059.2202237-CDS-H-paniculata_contig8437:6935..73431622931059.2202237-CDS-H-paniculata_contig8437:6935..7343Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 6936..7343 +
1691481571.238573-CDS-H-paniculata_contig8437:6935..73431691481571.238573-CDS-H-paniculata_contig8437:6935..7343Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 6936..7343 +
1622931059.2343385-CDS-H-paniculata_contig8437:7674..78641622931059.2343385-CDS-H-paniculata_contig8437:7674..7864Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 7675..7864 +
1691481571.2466793-CDS-H-paniculata_contig8437:7674..78641691481571.2466793-CDS-H-paniculata_contig8437:7674..7864Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 7675..7864 +
1622931059.2503362-CDS-H-paniculata_contig8437:8669..88371622931059.2503362-CDS-H-paniculata_contig8437:8669..8837Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 8670..8837 +
1691481571.255092-CDS-H-paniculata_contig8437:8669..88371691481571.255092-CDS-H-paniculata_contig8437:8669..8837Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8437 8670..8837 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8437.16434.1

>prot_H-paniculata_contig8437.16434.1 ID=prot_H-paniculata_contig8437.16434.1|Name=mRNA_H-paniculata_contig8437.16434.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=830bp
MPRRPREGYHVSFRTITERSVTVWWVFLLHSSHRNSGVALLQHLHGSPRI
SSHPCFSGSSLAVAPLDSSLKQYSKTYSERVMALTKSVVLHSSSNIQHDV
GSVDPPPERNADDMWAAALPDSPKARQKAFNIHLMQFVKAGDAEGALRLY
GAVRELRCHATEGMFNAVLSLCGDGTTICRGKRVLSDMEAAGFMPKENSY
SFLLREAAGRGAFDEAFSILRDMTQRGVAPRLRSYAPVLRGLCDEASATA
GASTPDMSLAVEVWSHMREHGVQPLEQDYLLMIKGWAQSKQLWGRVRDSS
VERLLRELSNSAFELSPANHVEPVRNTTNATIPFLDTLLEAFNCNSGSDT
ATPAIARIASVSPRPGEGGAFCDCCGGRLGAVGLSDDERLRVRSALKSLA
AESLLHGQAGGGAAAAVDPAEEGSEGNGGAREREEVVEETERSEVVEGLG
DRPRKRGRPVALTAPIGGLDHFAGWLEERQREPSGGFTTVIDGCNIAYYG
QNVEGGHVRMLQVDQVVKMLEAESERVLVVFPDRYLRTVVVNSSRFKGVK
NAPTKLSSDALKAIEEWEERGMLYRCANGADDDLFWMYFTVASDGAVAPN
CVNGNISVSECTVANDRVVDGSDRCATSITPGGNFVASRVEDGRLAVNRE
GTNGSSSGGGRMEEVLNGGIKNGINTVASTDCVTSTRLTVVSNDEMRNHR
MALLEPVPFRRWRNSQVRGFHLQPMVRNMSTATNDDSREEGSAQDNDQQS
ELSDRAPPRKPVVLGVPSFTRDMQVVDRAWHIPIMQDTPGVTGSKWLCIN
LTAGLHQDERYGPSSSLPEDHGSKSIESR*
back to top

mRNA from alignment at H-paniculata_contig8437:744..8951+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8437.16434.1 ID=mRNA_H-paniculata_contig8437.16434.1|Name=mRNA_H-paniculata_contig8437.16434.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8208bp|location=Sequence derived from alignment at H-paniculata_contig8437:744..8951+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCATGAACGCGCTTGCATCGTTGCAACCAACGAGGAAATCCATACGCTAC
CCTGTTTGACAGGAAAATACCCAGCTGTTATAGTATATGCATGCAGCACG
AGTCGAAGCTGTTTGCAACGACAAATGCCACGACGGCCTCGAGAGGGATA
TCACGTCAGTTTTCGCACTATAACTGAACGGAGTGTAACCGTCTGGTGGG
TCTTCCTGTTGCACAGCAGTCACCGGAATAGCGGTGTCGCTCTACTTCAA
CATCTACACGGATCGCCTCGTATATCTTCACATCCATGCTTTAGTGGCAG
CTCTCTGGCGGTAGCTCCACTAGACTCTTCCCTAAAACAGTATTCTAAAA
CGTATTCCGAACGTGTGATGGCATTAACAAAGTCGGTCGTGTTGCACAGC
AGCAGCAATATCCAACATGATGTGGGGAGCGTTGACCCACCCCCAGAGCG
AAATGCTGATGACATGTGGGCGGCGGCTCTCCCGGACTCGCCCAAAGCCC
GGCAAAAAGCTTTCAATATACATTTGATGCAGTTCGTAAAAGCCGGTGAT
GCGGAAGGAGCTCTGCGGCTATATGGTGCCGTGAGGGAATTGCGCTGTCA
CGCGACCGAGGGAATGTTTAACGCAGTGTTAAGCTTGTGCGGCGATGGCA
CAACGGTAAGCAACTGCTACAATTCCAATTAGACACGTACGGTTGGGTGC
TGTCATGTTGGACATAAAAAAGTTTTTTCGTTTATTTGTGCTGTACTGCT
GTATGCAGGCAAATCTCGGCTCGACCTTTGTCGAGCCTCTTGTTGATTAT
ACGTGCAGAGGGGAACCATTTTCATGTTCTCTTGGTGCAAGAATGCTTCC
CAAAATAATGTTTGCATGCTTTCGCTTGTATCTCGAAGAAGCGCCTCGGG
ATTTTGTGTTTTTAATAACGTAATTTGCACCGGGACGATTCTGACCATAC
CTTACGGTATATGATCGGCAGAGCCGTACAGTCAGCTGCGACAGGGCTGC
TGCTCAGTTCGTGAGTAAACTACCTGTGTTGCCAGGTCGTTTGTTCTTCT
ACAGTTGGTCGATAGTGGCCCGTACCGCGAGCGACCCCTTAGTGGATGCA
ACGTTAAAGATTCTCCCGAATATGCCGTGTGTATTCACAGATGTGTGCCC
TCAACAACTATGGCATAGGCATGTCGGGTGTTGACTTGTTTGTTTCGTCT
GTATCTAGACCACGGCTGCAATTGTCGAGATTTTCTGTGTCGAGTGCAAA
TATGGCTAATTCAGCCTAGTAGTACCCACGAGCACGAAACCTACGCGTAC
GGCTTGCACAGATCTGTCGAGGCAAGCGGGTACTATCTGACATGGAAGCG
GCTGGTTTCATGCCAAAAGAAAACAGTTACAGCTTTCTCCTGCGCGAGGC
GGCTGGAAGGGGTGCTTTTGACGAAGCGTTTTCTATTTTGCGCGACATGA
CCCAGAGAGGTGTGGCACCGCGACTAAGGTCTTACGCACCTGTGCTGCGC
GGCCTGTGCGATGAGGCAAGTGCTACTGCTGGGGCATCGACTGTGGGCGG
TAAAAAGCCTGTAAAGACGCGCTTGTTGCACGCGATATGTGAGGCGGGAC
TTTGTCTGCACGTAGTTGCATAGTTCGAAGCTGGTGTCGCACTGCTTGTG
CTGCGGTGTACCTTGCCTTACAATTGCCCCGTGGTACGCAGGAGATCAGT
ATCGTCTCAGCGCTGGAACCTATACCCAAAATATTCATCCGACCCTAAAA
AACACGGGGGGAAGGAGTTAACTTCATGTCCACTAGTGTCGTAACGGGTT
CGACAATGAGTTCAACTTGATATTCGTCATACCCTCCTAGTAGGGGATAA
CTCGCCGATATACACGTTTCTAGATAGATATGCTCGTACATCTAACTGGG
GGTCTGAGCGATCGAACCAGCCTTTAGGCGGTTACTTGTGCTGTCTATGT
TCGAACCAATTGATTGTTTTGCTCTTTCAAATAGCCCGACATGTCGCTGG
CGGTGGAAGTATGGTCACATATGAGGGAGCACGGAGTGCAGCCACTAGAG
CAAGACTACCTGTTGATGATCAAGGGTTGGGCCCAATCGAAGCAGCTATG
GGGTCGTGTAAGGGACAGCTCTGTGGAGAGATTGCTGCGAGAACTGAGCA
ACTCTGCTTTTGAACTTTCCCCGGCCAATCATGTCGAACCAGGTGACAAG
GGTGGGATAAACGGGATTGGCAAAATACAACCACAATATTGCTGCTGTTA
GATTAAGCTTGGCGGGTTCCTAGGCGAGGCTGCAACGAGGCGTCTCAAGA
AGTGTTGCAATTGTTTAAAACAGATCAGTTGAGTCACGTGGGCCTCGTCG
TCGGTGGAAAGCAGAACCGGGTTTGTCTGCTCAAGCATGTACAGCATCAA
CAACAGATAACCATAACCTCTTATTCATGGTGAGGCTGATAACACCTGAT
CGTAACGATAATTATAAGCAGTATTGTTTGTTATTGTTATACTACCTCTG
TCCCGTAATTCTGGCTTAAAATGGTGTTTTGTAAATATCTTGTGCAAACT
TGGGTTTGGTGAAAAAAAAAGCATATCATTCGAAAGCCTACATGTTCAGC
TTGCATGTAGATATCTTCAAAATGTCTTTTGGATTCGAAATGGTTGATTT
GCAAAACAGCTGAATAGGCCGAAATCGACTGAAAGTCATGATTTTCCATT
GTTTCCCGAACCAGTATAGACATTAGTACGGGGTCACCATTTGCAATAGA
ATTCTTAGGTCCTGATCTCTTGTGATTGCGCCGGTGCTGCATGTCGAGTA
TCGGTCTGCCTGAGATAGAACTGTATTTGGTTGCTGCCGATTGTACTCTT
ATCGAAGAAGAGATCTGGCAATGTGCTTGCTCACTGTTGTCTGTACCGTT
GGTAGCCGCATTCATCAGAGAAGGCGCTATAAGTAAATGGAATCGTGGTC
GAATACGTTTTCAGGACCGATACAGTAACCTTCAGGTGCAACAAGGTCGC
ACAACACTTTTCACGCAGAAAACGTCATTATGCAGTCTATTGATTCATGA
TTAAAACACCAACGTTGGTTCCCGAGTTGACAAAAGATCACAGTGGTCAT
CTTCTCCCTCTTCGCTGAGCTTGTTAACGATACCGAATCAATCTACGCGC
CCCCCGTGACCTCTACTGTATCCATCGACGCCCCCTTCGTTTTGTCAATG
AAAACAAGTCCGGAATACGACGAACGCCACCATTCCATTCCTAGACACCC
TTCTGGAGGCCTTCAACTGCAACTCGGGCTCCGACACCGCCACCCCCGCG
ATAGCTCGCATCGCGTCGGTGTCTCCTCGTCCGGGAGAAGGAGGTGCCTT
TTGCGATTGCTGCGGGGGCCGCCTGGGGGCGGTAGGGCTGTCCGACGACG
AACGTCTGCGGGTGCGCTCTGCGTTGAAGAGCTTAGCCGCAGAAAGTCTT
CTTCATGGGCAGGCTGGTGGGGGTGCTGCTGCTGCTGTTGATCCGGCGGA
AGAGGGTAGCGAGGGAAACGGCGGAGCCCGAGAGAGAGAGGAAGTGGTGG
AGGAAACAGAGAGAAGCGAAGTTGTAGAGGGGCTGGGGGATAGACCTAGA
AAGAGGGGACGGCCGGTAGCACTGACGGCGCCGATTGGAGGCCTGGATCA
TTTCGCGGGTTGGTTGGAAGAAAGACAAAGAGAGGTGGGATATAGAAAGT
TGCCAAACGGCACCATATTTATTGTTAGGAGAATTCGTTACTATTATTCG
AAGCGTCGGTTTTTCAACTCTCTCCAGTGCCAGTAGTCGACGAATCAGTT
AACCCAACCGTGTAACTTGTTTCTACCTTCGTTCGTTTGGGTGTTTCGTC
GATATATGCAGGGACTTTTTTTGCCCTCCCGAGTATACCTTGGTATCTTT
TTCGGGCTTGTTGATATCTACTTTTGCATAAACCACACACGACCTTGGCA
TGCACAGTTCTTTGGGTCAGCCGTAGGTATGTTGCGTGATCCATGTGACC
GGTCACTTGTATTGCGATGTCCCCCGTGCGATTGTGTTGATTGGTTACAG
ATATGCTCATGTGCGATGGTTGAAGCAACATTTCTTTCCCGTGCTTTGCG
ATTTTGTTGCGCTGACCTTTCTCAGCCATCGGGAGGCTTTACTACCGTTA
TCGACGGGTGTAACATTGCCTACTACGGGCAGAACGTCGAGGGGGGGCAT
GTTCGGATGTTACAGGTAAGCTAGGAGGAGAAAACAGTACCGAGAGACTG
TTCATGCTGTCGTCACCACTCGGTGATCACGTAATATCGATCACGTCTTC
CATAAACCATGCTGATCGCTGATTAGGAACCATGCGATAGTATTGTATTA
TGAGAGACTTCAATTTAGGATCTGCGATACTCTCTGCGGCGTATGCGCTT
GATTTCCATGCGCTGAGCTCGAGCGATATTGATGAGCCCATGACTGCGGC
GAAAATTGGCATATTTTACCGTCGTATTAGTTATGCCGGAAACGTTCAGC
CATAAGCCTGTTATAGGACCAGCCGAAGATATTTGAATAGGCTAGGTCGT
TTGCCGTGGGTACCTGCTGAAAACGACATATCTAAACAAGTTCACAGAGC
AGTAAACTTCCTCCCCCCCCCCGATCGCCGACCGCGGCAACTCTCCTGCT
CATGCGATAGGTGGATCAAGTAGTGAAGATGCTAGAGGCGGAGAGCGAGC
GGGTCCTGGTCGTTTTTCCTGATCGTTACCTGCGAACAGTTGTGGTCAAC
TCCTCCCGCTTCAAGGGCGTCAAGGTTAGCCAAGACCATCAAGAATTGTT
TCGCGATATATACCGCGGAGCGTTTTTGTGCGATTTCGAATTCTCGCGTT
TGGTGTTTCTTGCTGTGGATAATTCCTTTCGTGGACATCATAGTTTCCTT
GTTCCGGTGGAAGGCCTGGGCGTCTTGCATGATTGGCCTATAATGGCGTG
AGAGCGTGCAGCGCGTATGGTGGAAAACATGATCTCGTCATGGTTTTGCC
TGCCCGACGATTCGTTGATCGAAGTGATGCCTCACGTACCACGGCCAAGT
TAAACGCCGACAGGTTTTGACTCCCTGTTGACACACTGGGCGAGCATCGG
ATTTCTGAAATAGTGGCACATTAGCGGAGCATTGAACTTCTGAAACCTCG
TTCGACTTGGGAGGCAGCTTTCGATTTACGTATTTCAATGGTGACTCCAC
TGTATTTGATTCGCATCTCAAACCCTCCGACGATAGCATCAGAATTTTGT
GTTCATTTTCTGTCCTTCAATACGTTCTCTCGCCTGGATCTTCTCTCCCC
GTTTTACCCTGCATTCGGCCGCAGAATGCCCCAACTAAGTTGAGCTCGGA
CGCCTTGAAGGCGATTGAGGAATGGGAAGAGCGAGGTATGCTCTACAGGT
ACACCATGACGACAAACGCTGACCATCGTGAACCGTCTTAGCCCGTTCCA
GCTGTGAATGCGGTAGGGCGATACCGGCTGCCATTACCTGACTGCTTGGC
TGAATTTCTTTGCACTGGGATTCTCGTCCTCGAGAAGATGGTTGTGACGG
CAAAAATCGTTGAATAGTTGCTCGTTCTAAATGCCGGTGCTGTCGCAATA
ATTATTTTGGATGGTTATCCTGTGCCAAGCTTGTGTGGCTTAAATATCGG
GCTCCCGCGTGGGCCATGTTGACACCGCTGCAGCAGCAGTAGCTGTTACT
CGCTGAGAGTCGGGTAACCGTTGCGCTCGTTTCGCCCCGCCACCCCGACT
GTTGGCGTTGCATTGTTCCCACCAAGCGAATATATTACTGTGTGCAACTG
CTTCGGGGGTCTCTGCAGCTAGATTATTGCTTGCTCTTCGCAAAAAGCCC
TCACGCCCCGCATTCGTAGAAGTGGTGGAAGCACTTGCACAGTTTGCATC
TCATGCATGGTGCGCGCAGCAAAGCTTCTCAAGGTAAACGTCGGCGGGGA
GGGTATACTTATGTTTTGCATGTCGTAGTTATGATACCATTGACCACGCG
TCCTCGGGAGGACGGAACGTGATTCCTATCAGAGCAATTTTCGATGGCTT
GTCGCTCTTTGGGTAGGGAATCGGGGGGGGGGGGGGGATATTGGGCGTAT
TACAGGCACCGTTCACTCGTTGTTGCTATCTTGCAGTCTGCTGTTTTTTG
TAGCGATGATCTTTGCAATCGTCCATCCACCTGTGTCGGCAGGTGCGCAA
ACGGAGCGGACGATGACCTGTTTTGGATGTACTTCACCGTGGCTTCAGAT
GGTGCCGTTGCCCCGAATTGTGTTAACGGCAATATATCCGTTAGTGAATG
CACCGTTGCCAACGATAGGGTCGTTGACGGCAGTGATAGGTGTGCTACAA
GTATTACGCCTGGTGGAAATTTCGTCGCTTCTCGCGTTGAAGATGGAAGA
CTCGCGGTTAATCGTGAAGGCACAAACGGTTCTAGCAGCGGCGGGGGGAG
AATGGAAGAAGTACTAAATGGTGGAATAAAGAATGGCATCAATACTGTCG
CGTCTACGGATTGCGTTACGAGTACACGGTTGACTGTGGTTTCGAATGAC
GAGATGAGGAACCACAGGATGGCGCTGCTGGAACCTGTACCGTTCCGAAG
GTATAGCGCATGACAAAAATAGGGTAGTGTACTCTGTTTTCGTTCGAAGA
GTGCTACGGTAATCGTCGTTTGGCGTACCTTTTCAGTTGATTTTCCGCCG
GTGCTGCTCGAATATTGTTCCGTTTGTCGGCACGTATTAGTTGTGTCAGC
GAGTTGGCTGCAAGATAAAACTGTCGGCAATGTGTATGTGCAACCTTTTC
TCTTCAATCCTCATACCCAAACGCCATTCGTTCTCAAGTATGCCATCGTG
CCTTCGCAGTCAGGGCTTACTACAACAGTGTGAAACCGGTGGGTGCGTTC
CCGGTTGATTTGTGTGAAATTGTTTCATCAGGTGGAGGAATTCCCAAGTG
CGAGGATTCCATTTACAACCGATGGTGCGTAACATGTCCACAGCTACAAA
CGATGATAGCAGAGAGGAGGGCAGCGCTCAAGACAACGACCAGCAATCTG
AGCTATCCGATCGAGCGCCACCGCGTAAGCCGGTTGTATTGGGTGTCCCT
TCCTTCACGCGAGATATGCAGGTGTGCGTTTTGTGGCTTGCGGGCGGAAA
AGGTGTAGGCCAAGTGTTACCTTTCTGGCAAAACTTACAGGTTAACTTAT
TTTGCGAGGTGCGATGATCTTGTGTCGACAAAACCTACCCTAGAAAGCTG
TTGGAGACGAGCTACGTATAAAAACATTACCCAGGTAATGAATTCGCGGC
ATCGCCGGGTTTGGCCGACGTGTTCGATTGAAGAAATCGGCATTTTATCG
ACAATTGGAATTGTCCAGAAGACAAGAAACTGGACAAATGTGCCGCTAGT
TTGTACGAGAGCGATCGCTTCCTATCTTTTGAGAGTTTTCTTGCCCATGT
GATTCCGTTTTTTTTTAGACTTGTGGATCCGATGAATCATAAAGCACATG
GTTCGGTTGACGGTTGACCATATGCCCCTCACTTACAGAATGGAGGCTGG
ATTTACTGAAGGCTTGTGTGTATGACTTGCGCGGAATATACCAGGCAAAC
AGGGGTTGGAAAGTGGGGAGGTGCGCGGAGACCGAGCGCTCGCTCCTCGT
TTCACGGGAGGCCTTGGATGCTACCCTGGAAATCCCGCGCGTCCTGAACG
CAACTGTGTCATGTTGCAAAGCTGTTTGTCAATGATTTTGCTGGGGATGA
CAGCCAAAATGAATACATGATGTTCTGCTGCGTTGAACAAACATGTAACA
ACCACAGTACAGCTACATCGCCCCCGGAAATACGCCCTATATCGCGTACA
TGGTGCGAATGTCCGTCACAGATCATACCTTCCCTACGCCGTAATAATGT
CAATGCGCCTCACCGACCACTGTCAGGTTGTGGATCGGGCCTGGCATATT
CCCATTATGCAAGACACACCTGGGGTCACAGGAAGCAAATGGTTGTGCAT
CAACCTCACCGCGGGCTTGCATCAAGACGAGCGATATGGACCATCATCGT
CTTTGCCCGAGGATCACGGCTCAAAGTCCATTGAAAGTCGATAGCACCTA
CTTTTCCGCTCTTTCTAGCGGATTACATGTTGTCGTGTCTTTCAAAATAG
GTAACATGAATGTGCTGTAAAGGTCCGCGAAGTCAACTAAGGAGTCATTA
GCAACAAC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig8437:744..8951+

>mRNA_H-paniculata_contig8437.16434.1 ID=mRNA_H-paniculata_contig8437.16434.1|Name=mRNA_H-paniculata_contig8437.16434.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4980bp|location=Sequence derived from alignment at H-paniculata_contig8437:744..8951+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCACGACGGCCTCGAGAGGGATATCACGTCAGTTTTCGCACTATAAC
TGAACGGAGTGTAACCGTCTGGTGGGTCTTCCTGTTGCACAGCAGTCACC
GGAATAGCGGTGTCGCTCTACTTCAACATCTACACGGATCGCCTCGTATA
TCTTCACATCCATGCTTTAGTGGCAGCTCTCTGGCGGTAGCTCCACTAGA
CTCTTCCCTAAAACAGTATTCTAAAACGTATTCCGAACGTGTGATGGCAT
TAACAAAGTCGGTCGTGTTGCACAGCAGCAGCAATATCCAACATGATGTG
GGGAGCGTTGACCCACCCCCAGAGCGAAATGCTGATGACATGTGGGCGGC
GGCTCTCCCGGACTCGCCCAAAGCCCGGCAAAAAGCTTTCAATATACATT
TGATGCAGTTCGTAAAAGCCGGTGATGCGGAAGGAGCTCTGCGGCTATAT
GGTGCCGTGAGGGAATTGCGCTGTCACGCGACCGAGGGAATGTTTAACGC
AGTGTTAAGCTTGTGCGGCGATGGCACAACGATGCCACGACGGCCTCGAG
AGGGATATCACGTCAGTTTTCGCACTATAACTGAACGGAGTGTAACCGTC
TGGTGGGTCTTCCTGTTGCACAGCAGTCACCGGAATAGCGGTGTCGCTCT
ACTTCAACATCTACACGGATCGCCTCGTATATCTTCACATCCATGCTTTA
GTGGCAGCTCTCTGGCGGTAGCTCCACTAGACTCTTCCCTAAAACAGTAT
TCTAAAACGTATTCCGAACGTGTGATGGCATTAACAAAGTCGGTCGTGTT
GCACAGCAGCAGCAATATCCAACATGATGTGGGGAGCGTTGACCCACCCC
CAGAGCGAAATGCTGATGACATGTGGGCGGCGGCTCTCCCGGACTCGCCC
AAAGCCCGGCAAAAAGCTTTCAATATACATTTGATGCAGTTCGTAAAAGC
CGGTGATGCGGAAGGAGCTCTGCGGCTATATGGTGCCGTGAGGGAATTGC
GCTGTCACGCGACCGAGGGAATGTTTAACGCAGTGTTAAGCTTGTGCGGC
GATGGCACAACGATCTGTCGAGGCAAGCGGGTACTATCTGACATGGAAGC
GGCTGGTTTCATGCCAAAAGAAAACAGTTACAGCTTTCTCCTGCGCGAGG
CGGCTGGAAGGGGTGCTTTTGACGAAGCGTTTTCTATTTTGCGCGACATG
ACCCAGAGAGGTGTGGCACCGCGACTAAGGTCTTACGCACCTGTGCTGCG
CGGCCTGTGCGATGAGGCAAGTGCTACTGCTGGGGCATCGACTATCTGTC
GAGGCAAGCGGGTACTATCTGACATGGAAGCGGCTGGTTTCATGCCAAAA
GAAAACAGTTACAGCTTTCTCCTGCGCGAGGCGGCTGGAAGGGGTGCTTT
TGACGAAGCGTTTTCTATTTTGCGCGACATGACCCAGAGAGGTGTGGCAC
CGCGACTAAGGTCTTACGCACCTGTGCTGCGCGGCCTGTGCGATGAGGCA
AGTGCTACTGCTGGGGCATCGACTCCCGACATGTCGCTGGCGGTGGAAGT
ATGGTCACATATGAGGGAGCACGGAGTGCAGCCACTAGAGCAAGACTACC
TGTTGATGATCAAGGGTTGGGCCCAATCGAAGCAGCTATGGGGTCGTGTA
AGGGACAGCTCTGTGGAGAGATTGCTGCGAGAACTGAGCAACTCTGCTTT
TGAACTTTCCCCGGCCAATCATGTCGAACCAGCCCGACATGTCGCTGGCG
GTGGAAGTATGGTCACATATGAGGGAGCACGGAGTGCAGCCACTAGAGCA
AGACTACCTGTTGATGATCAAGGGTTGGGCCCAATCGAAGCAGCTATGGG
GTCGTGTAAGGGACAGCTCTGTGGAGAGATTGCTGCGAGAACTGAGCAAC
TCTGCTTTTGAACTTTCCCCGGCCAATCATGTCGAACCAGTCCGGAATAC
GACGAACGCCACCATTCCATTCCTAGACACCCTTCTGGAGGCCTTCAACT
GCAACTCGGGCTCCGACACCGCCACCCCCGCGATAGCTCGCATCGCGTCG
GTGTCTCCTCGTCCGGGAGAAGGAGGTGCCTTTTGCGATTGCTGCGGGGG
CCGCCTGGGGGCGGTAGGGCTGTCCGACGACGAACGTCTGCGGGTGCGCT
CTGCGTTGAAGAGCTTAGCCGCAGAAAGTCTTCTTCATGGGCAGGCTGGT
GGGGGTGCTGCTGCTGCTGTTGATCCGGCGGAAGAGGGTAGCGAGGGAAA
CGGCGGAGCCCGAGAGAGAGAGGAAGTGGTGGAGGAAACAGAGAGAAGCG
AAGTTGTAGAGGGGCTGGGGGATAGACCTAGAAAGAGGGGACGGCCGGTA
GCACTGACGGCGCCGATTGGAGGCCTGGATCATTTCGCGGGTTGGTTGGA
AGAAAGACAAAGAGAGTCCGGAATACGACGAACGCCACCATTCCATTCCT
AGACACCCTTCTGGAGGCCTTCAACTGCAACTCGGGCTCCGACACCGCCA
CCCCCGCGATAGCTCGCATCGCGTCGGTGTCTCCTCGTCCGGGAGAAGGA
GGTGCCTTTTGCGATTGCTGCGGGGGCCGCCTGGGGGCGGTAGGGCTGTC
CGACGACGAACGTCTGCGGGTGCGCTCTGCGTTGAAGAGCTTAGCCGCAG
AAAGTCTTCTTCATGGGCAGGCTGGTGGGGGTGCTGCTGCTGCTGTTGAT
CCGGCGGAAGAGGGTAGCGAGGGAAACGGCGGAGCCCGAGAGAGAGAGGA
AGTGGTGGAGGAAACAGAGAGAAGCGAAGTTGTAGAGGGGCTGGGGGATA
GACCTAGAAAGAGGGGACGGCCGGTAGCACTGACGGCGCCGATTGGAGGC
CTGGATCATTTCGCGGGTTGGTTGGAAGAAAGACAAAGAGAGCCATCGGG
AGGCTTTACTACCGTTATCGACGGGTGTAACATTGCCTACTACGGGCAGA
ACGTCGAGGGGGGGCATGTTCGGATGTTACAGCCATCGGGAGGCTTTACT
ACCGTTATCGACGGGTGTAACATTGCCTACTACGGGCAGAACGTCGAGGG
GGGGCATGTTCGGATGTTACAGGTGGATCAAGTAGTGAAGATGCTAGAGG
CGGAGAGCGAGCGGGTCCTGGTCGTTTTTCCTGATCGTTACCTGCGAACA
GTTGTGGTCAACTCCTCCCGCTTCAAGGGCGTCAAGGTGGATCAAGTAGT
GAAGATGCTAGAGGCGGAGAGCGAGCGGGTCCTGGTCGTTTTTCCTGATC
GTTACCTGCGAACAGTTGTGGTCAACTCCTCCCGCTTCAAGGGCGTCAAG
AATGCCCCAACTAAGTTGAGCTCGGACGCCTTGAAGGCGATTGAGGAATG
GGAAGAGCGAGGTATGCTCTACAGAATGCCCCAACTAAGTTGAGCTCGGA
CGCCTTGAAGGCGATTGAGGAATGGGAAGAGCGAGGTATGCTCTACAGGT
GCGCAAACGGAGCGGACGATGACCTGTTTTGGATGTACTTCACCGTGGCT
TCAGATGGTGCCGTTGCCCCGAATTGTGTTAACGGCAATATATCCGTTAG
TGAATGCACCGTTGCCAACGATAGGGTCGTTGACGGCAGTGATAGGTGTG
CTACAAGTATTACGCCTGGTGGAAATTTCGTCGCTTCTCGCGTTGAAGAT
GGAAGACTCGCGGTTAATCGTGAAGGCACAAACGGTTCTAGCAGCGGCGG
GGGGAGAATGGAAGAAGTACTAAATGGTGGAATAAAGAATGGCATCAATA
CTGTCGCGTCTACGGATTGCGTTACGAGTACACGGTTGACTGTGGTTTCG
AATGACGAGATGAGGAACCACAGGATGGCGCTGCTGGAACCTGTACCGTT
CCGAAGGTGCGCAAACGGAGCGGACGATGACCTGTTTTGGATGTACTTCA
CCGTGGCTTCAGATGGTGCCGTTGCCCCGAATTGTGTTAACGGCAATATA
TCCGTTAGTGAATGCACCGTTGCCAACGATAGGGTCGTTGACGGCAGTGA
TAGGTGTGCTACAAGTATTACGCCTGGTGGAAATTTCGTCGCTTCTCGCG
TTGAAGATGGAAGACTCGCGGTTAATCGTGAAGGCACAAACGGTTCTAGC
AGCGGCGGGGGGAGAATGGAAGAAGTACTAAATGGTGGAATAAAGAATGG
CATCAATACTGTCGCGTCTACGGATTGCGTTACGAGTACACGGTTGACTG
TGGTTTCGAATGACGAGATGAGGAACCACAGGATGGCGCTGCTGGAACCT
GTACCGTTCCGAAGGTGGAGGAATTCCCAAGTGCGAGGATTCCATTTACA
ACCGATGGTGCGTAACATGTCCACAGCTACAAACGATGATAGCAGAGAGG
AGGGCAGCGCTCAAGACAACGACCAGCAATCTGAGCTATCCGATCGAGCG
CCACCGCGTAAGCCGGTTGTATTGGGTGTCCCTTCCTTCACGCGAGATAT
GCAGGTGGAGGAATTCCCAAGTGCGAGGATTCCATTTACAACCGATGGTG
CGTAACATGTCCACAGCTACAAACGATGATAGCAGAGAGGAGGGCAGCGC
TCAAGACAACGACCAGCAATCTGAGCTATCCGATCGAGCGCCACCGCGTA
AGCCGGTTGTATTGGGTGTCCCTTCCTTCACGCGAGATATGCAGGTTGTG
GATCGGGCCTGGCATATTCCCATTATGCAAGACACACCTGGGGTCACAGG
AAGCAAATGGTTGTGCATCAACCTCACCGCGGGCTTGCATCAAGACGAGC
GATATGGACCATCATCGTCTTTGCCCGAGGATCACGGCTCAAAGTCCATT
GAAAGTCGATAGGTTGTGGATCGGGCCTGGCATATTCCCATTATGCAAGA
CACACCTGGGGTCACAGGAAGCAAATGGTTGTGCATCAACCTCACCGCGG
GCTTGCATCAAGACGAGCGATATGGACCATCATCGTCTTTGCCCGAGGAT
CACGGCTCAAAGTCCATTGAAAGTCGATAG
back to top