mRNA_H-paniculata_contig841.16420.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig841.16420.1 vs. uniprot
Match: D8LDX4_ECTSI (Fumarate hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX4_ECTSI) HSP 1 Score: 194 bits (492), Expect = 1.030e-57 Identity = 93/108 (86.11%), Postives = 100/108 (92.59%), Query Frame = 1
Query: 1 FGVLKKCAAKYSMGKGKLDKVIGEAIIEAAEEVAQGKLDDHFPLVVFQTGSGTQTNMNCNEVIANRAIEILGGVMGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVFQ 324
FGVLKKC A YSM KGKL+K +GEAI+EAA+EV +GKLDDHFPLVVFQTGSGTQTNMNCNEVI+NRAIEILGGV GSK PVHPNDHVNMGQSSNDSFPTAMHIAA+ Q
Sbjct: 65 FGVLKKCCALYSMSKGKLNKDVGEAIVEAADEVIRGKLDDHFPLVVFQTGSGTQTNMNCNEVISNRAIEILGGVKGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAIMQ 172
BLAST of mRNA_H-paniculata_contig841.16420.1 vs. uniprot
Match: A0A6H5JEX1_9PHAE (Fumarate hydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX1_9PHAE) HSP 1 Score: 186 bits (471), Expect = 1.130e-55 Identity = 91/110 (82.73%), Postives = 99/110 (90.00%), Query Frame = 1
Query: 1 FGVLKKCAAKYSMGKGKLDKVIGEAIIEAAEEVAQGKLDDHFPLVVFQTGSGTQTNMNCNEVIANR--AIEILGGVMGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVFQ 324
FGVLKKC A YSM KGKL++ +GEAI++AA+EV QGKLDDHFPLVVFQTGSGTQTNMNCNEVI+NR AIEILGG GSK PVHPNDHVNMGQSSNDSFPTAMHIAA+ Q
Sbjct: 4 FGVLKKCCALYSMSKGKLNQDVGEAIVKAADEVIQGKLDDHFPLVVFQTGSGTQTNMNCNEVISNRHVAIEILGGAKGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAIMQ 113
BLAST of mRNA_H-paniculata_contig841.16420.1 vs. uniprot
Match: A0A397D1L0_9STRA (Lyase_1 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D1L0_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.350e-54 Identity = 84/108 (77.78%), Postives = 97/108 (89.81%), Query Frame = 1
Query: 4 GVLKKCAAKYSMGKGKLDKVIGEAIIEAAEEVAQGKLDDHFPLVVFQTGSGTQTNMNCNEVIANRAIEILGGVMGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVFQV 327
G++KKCAAKY++ GKLDK I E II+AA++V GKLDDHFPLVVFQTGSGTQ+NMN NEVI+NRAIE +GG +GSKSPVHPNDHVNMGQSSNDSFPTAMHIAAV ++
Sbjct: 73 GIVKKCAAKYNLKLGKLDKAIAENIIKAADDVIAGKLDDHFPLVVFQTGSGTQSNMNTNEVISNRAIEFMGGELGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVLEI 180
BLAST of mRNA_H-paniculata_contig841.16420.1 vs. uniprot
Match: A0A835YLQ6_9STRA (Fumarate hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLQ6_9STRA) HSP 1 Score: 182 bits (463), Expect = 2.590e-53 Identity = 86/108 (79.63%), Postives = 98/108 (90.74%), Query Frame = 1
Query: 1 FGVLKKCAAKYSMGKGKLDKVIGEAIIEAAEEVAQGKLDDHFPLVVFQTGSGTQTNMNCNEVIANRAIEILGGVMGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVFQ 324
FGVLKKCAA+Y+M GKLD+ +G+AI++A +EV GK DDHFPLVVFQTGSGTQTNMN NEV++NRAIEILGG +GSK+PVHPNDHVNMGQSSNDSFPTAMHIAAV Q
Sbjct: 75 FGVLKKCAAQYNMSVGKLDRKLGDAIVQACDEVLAGKFDDHFPLVVFQTGSGTQTNMNVNEVVSNRAIEILGGALGSKTPVHPNDHVNMGQSSNDSFPTAMHIAAVAQ 182
BLAST of mRNA_H-paniculata_contig841.16420.1 vs. uniprot
Match: A0A8J2SCA1_9STRA (Fumarate hydratase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCA1_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.120e-52 Identity = 87/112 (77.68%), Postives = 99/112 (88.39%), Query Frame = 1
Query: 1 FGVLKKCAAKYSMGKGKLDKVIGEAIIEAAEEVAQGKLDDHFPLVVFQTGSGTQTNMNCNEVIANRAIEILGGVMGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVFQVRYR 336
FGVLKKC+A Y+ G+LD+ I +AI AA+EVA GKLDDHFPLVV+QTGSGTQTNMNCNEVIANRAIE+LGGV+GSK PVHPNDHVNMGQSSNDSFPTAMHI+AV ++ R
Sbjct: 66 FGVLKKCSALYNKRTGRLDEKIADAIAAAADEVASGKLDDHFPLVVYQTGSGTQTNMNCNEVIANRAIELLGGVIGSKEPVHPNDHVNMGQSSNDSFPTAMHISAVTELENR 177
BLAST of mRNA_H-paniculata_contig841.16420.1 vs. uniprot
Match: A0A2D4BP08_PYTIN (Fumarate hydratase n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BP08_PYTIN) HSP 1 Score: 179 bits (454), Expect = 3.810e-52 Identity = 85/109 (77.98%), Postives = 98/109 (89.91%), Query Frame = 1
Query: 1 FGVLKKCAAKYSMGKGKLDKVIGEAIIEAAEEVAQGKLDDHFPLVVFQTGSGTQTNMNCNEVIANRAIEILGGVMGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVFQV 327
FGV+KKCAAKY++ KGKLD I + I++AA++V QGKLD+HFPLVVFQTGSGTQ+NMN NEVIANRAIE GG +GSKSPVHPNDHVNMGQSSNDSFPTAMHIAAV ++
Sbjct: 60 FGVVKKCAAKYNLQKGKLDAKIADVIVKAADDVIQGKLDEHFPLVVFQTGSGTQSNMNTNEVIANRAIEYAGGELGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVMEI 168
BLAST of mRNA_H-paniculata_contig841.16420.1 vs. uniprot
Match: A0A2W4RRY7_9PROT (Class II fumarate hydratase (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RRY7_9PROT) HSP 1 Score: 168 bits (425), Expect = 3.310e-51 Identity = 80/110 (72.73%), Postives = 95/110 (86.36%), Query Frame = 1
Query: 4 GVLKKCAAKYSMGKGKLDKVIGEAIIEAAEEVAQGKLDDHFPLVVFQTGSGTQTNMNCNEVIANRAIEILGGVMGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVFQVRY 333
G++K+ AA+ +M G+LD+ IGEAI++AA+EV GKLDDHFPLVV+QTGSGTQTNMN NEVIANRAIEILGG GSK PVHPNDHVNM QSSND++PTAMHIAA Q+ +
Sbjct: 56 GIIKRAAAETNMALGRLDRKIGEAIVKAAQEVIDGKLDDHFPLVVWQTGSGTQTNMNANEVIANRAIEILGGERGSKKPVHPNDHVNMSQSSNDTYPTAMHIAAAEQIHH 165
BLAST of mRNA_H-paniculata_contig841.16420.1 vs. uniprot
Match: A0A836CH65_9STRA (Fumarate hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH65_9STRA) HSP 1 Score: 175 bits (444), Expect = 9.980e-51 Identity = 83/108 (76.85%), Postives = 95/108 (87.96%), Query Frame = 1
Query: 1 FGVLKKCAAKYSMGKGKLDKVIGEAIIEAAEEVAQGKLDDHFPLVVFQTGSGTQTNMNCNEVIANRAIEILGGVMGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVFQ 324
FGVLKKCAA+Y+M +GKLD +G A+ A +E+ GK DDHFPLV+FQTGSGTQTNMN NEVI+NRAIE+LGG +GSK+PVHPNDHVNMGQSSNDSFPTAMHIAAV Q
Sbjct: 49 FGVLKKCAAQYNMQQGKLDAKLGGALTAACDEILAGKFDDHFPLVIFQTGSGTQTNMNVNEVISNRAIEMLGGALGSKTPVHPNDHVNMGQSSNDSFPTAMHIAAVTQ 156
BLAST of mRNA_H-paniculata_contig841.16420.1 vs. uniprot
Match: W2Q158_PHYPN (Fumarate hydratase n=23 Tax=Peronosporaceae TaxID=4777 RepID=W2Q158_PHYPN) HSP 1 Score: 176 bits (447), Expect = 1.090e-50 Identity = 83/109 (76.15%), Postives = 98/109 (89.91%), Query Frame = 1
Query: 1 FGVLKKCAAKYSMGKGKLDKVIGEAIIEAAEEVAQGKLDDHFPLVVFQTGSGTQTNMNCNEVIANRAIEILGGVMGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVFQV 327
FGV+KKCAAKY++ +GKLD + + II AA++V GKLDDHFPLVVFQTGSGTQ+NMN NEVI+NRAIE+ GGV+GSK+PVHPNDHVNMGQSSNDSFPTAMHIAAV ++
Sbjct: 113 FGVVKKCAAKYNLQQGKLDAAVADKIIAAADDVIAGKLDDHFPLVVFQTGSGTQSNMNTNEVISNRAIELAGGVLGSKTPVHPNDHVNMGQSSNDSFPTAMHIAAVQEI 221
BLAST of mRNA_H-paniculata_contig841.16420.1 vs. uniprot
Match: A0A8H7S7J2_9FUNG (Fumarate hydratase n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S7J2_9FUNG) HSP 1 Score: 175 bits (443), Expect = 1.270e-50 Identity = 85/109 (77.98%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 1 FGVLKKCAAKYSMGKGKLDKVIGEAIIEAAEEVAQGKLDDHFPLVVFQTGSGTQTNMNCNEVIANRAIEILGGVMGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVFQV 327
FG LKK AAK +M G LDK IG+AII+AA+EV GKLDDHFPLV++QTGSGTQT+MN NEV++NRAIEILGG MGSK+PVHPNDHVNMGQSSNDSFPTAMHIAAV ++
Sbjct: 53 FGTLKKAAAKVNMSYGILDKQIGDAIIQAADEVISGKLDDHFPLVIWQTGSGTQTHMNVNEVLSNRAIEILGGEMGSKTPVHPNDHVNMGQSSNDSFPTAMHIAAVVEI 161 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig841.16420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig841.16420.1 >prot_H-paniculata_contig841.16420.1 ID=prot_H-paniculata_contig841.16420.1|Name=mRNA_H-paniculata_contig841.16420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp FGVLKKCAAKYSMGKGKLDKVIGEAIIEAAEEVAQGKLDDHFPLVVFQTGback to top mRNA from alignment at H-paniculata_contig841:5040..6015- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig841.16420.1 ID=mRNA_H-paniculata_contig841.16420.1|Name=mRNA_H-paniculata_contig841.16420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=976bp|location=Sequence derived from alignment at H-paniculata_contig841:5040..6015- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig841:5040..6015- >mRNA_H-paniculata_contig841.16420.1 ID=mRNA_H-paniculata_contig841.16420.1|Name=mRNA_H-paniculata_contig841.16420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at H-paniculata_contig841:5040..6015- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |