mRNA_H-paniculata_contig84.16409.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig84.16409.1 vs. uniprot
Match: A0A6H5JHZ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ7_9PHAE) HSP 1 Score: 289 bits (739), Expect = 2.400e-85 Identity = 172/423 (40.66%), Postives = 231/423 (54.61%), Query Frame = 2
Query: 188 ACALPDNGGLWMLENSVEHRQPAEEYAFFEAGRPANRFYLLLHQRPQATMSTGLGPLGFASAQSKCWSATVGSMCGMLPQIITDSSGPLGERAQAHLPWIPMVRSLGTIVRVLAEQEGVSAQQQAVALPPVLVAWTHRGRSEDGSLPTPDIDALGGLDAPGRNCRWLQGNVGNLVHMAKITTLLSLLDNLPPAGMPPGSDYPFGGIEPADAIRARFRSMSRTRALATQSAQPNDNTRTIPSAEYVLIERRFLGIEPCLAARCPCCG----AEDVTTRHAGTFHRAGAQVDQHQPLLHAVTRLLKRLGIRSTVEDGNPFTAGRDYRMDIVVPAEELRDALINAYRDKGLLIDVTHADPQSTGHLERGSATIDGSAAAISEARKSAHYARRGHASFDECCFKLPPLAVEIFGRLGKCGEELLKQV 1444
AC DN +W+LE ++ R E FF+ +RF L +Q+ QA +STG G LG +A + +SA++G++ G LP +I GPLGE + +P +V +G ++ L ++ +S + LPP V W E G P + L D R Q +G V+ ++ + L++LP +PP D P+GG E + AR RS A A P D R IPS E+V RR LG+E LA RCP C E +TT HA T R GAQV+ H+PL +A++R L L ++ VE G PFT R+ MDIV+ L +A YR+KG L+DVTHADP + HL GSAT DG+AA SEARK HYAR GH SFDE FKL LAVE FGRLG+ G E + ++
Sbjct: 217 ACKRLDNMVMWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQQAQARLSTGAGGLGLPAAVMRRFSASLGNLVGTLPAVIAALRGPLGESVRVRIPGTVLVERMGDAIKELNQEHAISVEILKGILPPSWVEWALEPTGETGRR-QPTVAELAAHDGESTTPRKAQHELGKAVNKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHARTCPRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGTLLDVTHADPHAQVHLRNGSATSDGTAAQASEARKRQHYARPGHVSFDERSFKLTTLAVESFGRLGEEGYEFIDEL 638
BLAST of mRNA_H-paniculata_contig84.16409.1 vs. uniprot
Match: A0A6H5JQ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ53_9PHAE) HSP 1 Score: 281 bits (720), Expect = 3.250e-84 Identity = 169/430 (39.30%), Postives = 229/430 (53.26%), Query Frame = 2
Query: 215 LWMLENSVEHRQPAEEYAFFEAGRPANRFYLLLHQRPQATMSTGLGPLGFASAQSKCWSATVGSMCGMLPQIITDSSGPLGERAQAHLPWIPMVRSLGTIVRVLAEQEGVSAQQQAVALPPVLVAWTHRGRSEDGSLPTPDIDALGGLDAPGRNCRWLQGNVGNLVHMAKITTLLSLLDNLPPAGMPPGSDYPFGGIEPADAIRARFRSMSRTRALATQSAQPNDNTRTIPSAEYVLIERRFLGIEPCLAARCPCCG----AEDVTTRHAGTFHRAGAQVDQHQPLLHAVTRLLKRLGIRSTVEDGNPFTAGRDYRMDIVVPAEELRDALINAYRDKGLLIDVTHADPQSTGHLERGSATIDGSAAAISEARKSAHYARRGHASFDECCFKLPPLAVEIFGRLGKCGEELLKQVTGDTRDWRSTFLLGLK 1492
+W+LE ++ R E FF+ +RF L +Q+ QA +STG G LG A + +SA++G++ G LP +I GPLGE + +P +V +G ++ L ++ G+S + LPP V W E G P + L D R Q +G ++ ++ + L++LP +PP D P+GG E + AR RS A D R IPS E+V RR LG+E LA RCP C E +TT HA T R GAQV+ H+PL +A++R L L ++ VE G PFT R+ MDIV+ L +A YR+KG+L+DVTHADPQ+ HL GSAT DG AA SEARK HYA GH SFDE FKL LAVE FGRLG+ G E + ++ R + LK
Sbjct: 3 MWVLEATMGLRDTEVEEEFFQDDCQPDRFKLRPYQQAQARLSTGAGELGLPEAVMRRFSASLGNLVGTLPAVIAALRGPLGESVRVRIPGTVLVERMGDAIKELNQEHGISVEILKGILPPSWVEWALEPTGETGRR-QPTVAELAAHDGESTTPRKAQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHTFLRAAATDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHARTCQRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGIAAQASEARKRQHYACPGHVSFDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALK 431
BLAST of mRNA_H-paniculata_contig84.16409.1 vs. uniprot
Match: A0A6H5K195_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K195_9PHAE) HSP 1 Score: 291 bits (745), Expect = 1.400e-82 Identity = 171/423 (40.43%), Postives = 232/423 (54.85%), Query Frame = 2
Query: 188 ACALPDNGGLWMLENSVEHRQPAEEYAFFEAGRPANRFYLLLHQRPQATMSTGLGPLGFASAQSKCWSATVGSMCGMLPQIITDSSGPLGERAQAHLPWIPMVRSLGTIVRVLAEQEGVSAQQQAVALPPVLVAWTHRGRSEDGSLPTPDIDALGGLDAPGRNCRWLQGNVGNLVHMAKITTLLSLLDNLPPAGMPPGSDYPFGGIEPADAIRARFRSMSRTRALATQSAQPNDNTRTIPSAEYVLIERRFLGIEPCLAARCPCCG----AEDVTTRHAGTFHRAGAQVDQHQPLLHAVTRLLKRLGIRSTVEDGNPFTAGRDYRMDIVVPAEELRDALINAYRDKGLLIDVTHADPQSTGHLERGSATIDGSAAAISEARKSAHYARRGHASFDECCFKLPPLAVEIFGRLGKCGEELLKQV 1444
AC L DN +W+LE ++ R E FF+ +RF + +Q+ QA +STG G LG +A + +SA++G++ G LP +I GPLGE + +P +V +G ++ L ++ +S + LPP V W E G P + L D R Q +G ++ ++ + L++LP +PP D P+GG E + AR RS A A P D R IPS E+V RR LG+E LA +CP C E +TT HA T R GAQV+ H+PL +A++R L L ++ VE G PFT R+ MDIV+ L +A YR KG+L+DVTHADPQ+ HL GSAT DG AA SEARK HYAR GH SFDE FKL LAVE FGRLG+ G E + ++
Sbjct: 698 ACELLDNMVMWVLEATMGLRDTEVEEEFFQDDYQPDRFKIKTYQQAQARLSTGAGGLGLPAAVMRRFSASLGNLVGTLPAVIAALRGPLGESVRVRIPGTVLVERMGDAIKELNQEHAISVEILKGILPPSWVEWALEPAGETGRR-QPTVAELAAHDGESTTPRKAQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAEKCPRCHRGREGEIITTVHARTCPRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRKKGILLDVTHADPQAQVHLRNGSATSDGIAAQASEARKRQHYARPGHVSFDERSFKLTTLAVESFGRLGEEGYEFIDEL 1119
BLAST of mRNA_H-paniculata_contig84.16409.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE) HSP 1 Score: 285 bits (729), Expect = 5.470e-80 Identity = 172/439 (39.18%), Postives = 234/439 (53.30%), Query Frame = 2
Query: 188 ACALPDNGGLWMLENSVEHRQPAEEYAFFEAGRPANRFYLLLHQRPQATMSTGLGPLGFASAQSKCWSATVGSMCGMLPQIITDSSGPLGERAQAHLPWIPMVRSLGTIVRVLAEQEGVSAQQQAVALPPVLVAWTHRGRSEDGSLPTPDIDALGGLDAPGRNCRWLQGNVGNLVHMAKITTLLSLLDNLPPAGMPPGSDYPFGGIEPADAIRARFRSMSRTRALATQSAQPNDNTRTIPSAEYVLIERRFLGIEPCLAARCPCCG----AEDVTTRHAGTFHRAGAQVDQHQPLLHAVTRLLKRLGIRSTVEDGNPFTAGRDYRMDIVVPAEELRDALINAYRDKGLLIDVTHADPQSTGHLERGSATIDGSAAAISEARKSAHYARRGHASFDECCFKLPPLAVEIFGRLGKCGEELLKQVTGDTRDWRSTFLLGLK 1492
AC DN +W+LE ++ R E FF+ +RF L +Q+ QA +STG G LG +A + +SA++G++ LP +I GPLGE + +P +V +G ++ L ++ G+S + LPP V W E G P + L D R Q +G ++ ++ + L++LP +PP D P+GG E + AR RS A A P D R IPS E+V RR LGIE LA RCP C E +TT HA T R GAQV+ H+PL +A++R L L ++ VE G PFT R+ MDIV+ L +A YR+KG+L+DVTHADPQ+ HL GSAT DG+ SEARK HY+R GH S DE FKL LAVE FGRLG+ G E + ++ R + LK
Sbjct: 741 ACKRLDNMVMWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQQAQARLSTGAGGLGLPAAVMRRFSASLGNLVDTLPAVIAALRGPLGESVRVRIPGTVLVERMGDAIKELNQEHGISVEILKGILPPSWVEWALEPTGETGRR-QPTVAELAAHDGESTTPRKAQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGIEEFLAERCPRCHRGREGEIITTVHARTCPRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGTEIQASEARKRQHYSRPGHVSLDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALK 1178
BLAST of mRNA_H-paniculata_contig84.16409.1 vs. uniprot
Match: A0A6H5LLI3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLI3_9PHAE) HSP 1 Score: 269 bits (687), Expect = 1.800e-79 Identity = 167/420 (39.76%), Postives = 224/420 (53.33%), Query Frame = 2
Query: 245 RQPAEEYAFFEAGRPANRFYLLLHQRPQATMSTGLGPLGFASAQSKCWSATVGSMCGMLPQIITDSSGPLGERAQAHLPWIPMVRSLGTIVRVLAEQEGVSAQQQAVALPPVLVAWTHRGRSEDGSLPTPDIDALGGLDAPGRNCRWLQGNVGNLVHMAKITTLLSLLDNLPPAGMPPGSDYPFGGIEPADAIRARFRSMSRTRALATQSAQPNDNTRTIPSAEYVLIERRFLGIEPCLAARCPCCG----AEDVTTRHAGTFHRAGAQVDQHQPLLHAVTRLLKRLGIRSTVEDGNPFTAGRDYRMDIVVPAEELRDALINAYRDKGLLIDVTHADPQSTGHLERGSATIDGSAAAISEARKSAHYARRGHASFDECCFKLPPLAVEIFGRLGKCGEELLKQVTGDTRDWRSTFLLGLK 1492
R E FF+ +RF L +Q+ QA +STG G LG +A + +SA++G++ G LP +I PLGE + +P +V +G ++ L ++ GVS + LPP+ V W + E G P + L D R Q +G ++ ++ + L++LP +PP D P+GG E + AR RS A A P D R I S E+ RR L IE LA RCP C E +TT HA T R GAQV+ H+PL +A++R L L ++ VE G PFT R+ MDIV+ L +A YR+KG+L+DVTHADPQ+ HL GSAT DG AA SEARK HYAR GH SFDE FKL LAVE FGRLG+ G E + ++ R + LK
Sbjct: 4 RDTEVEEEFFQDDCQPDRFKLKPYQQAQARLSTGAGGLGLPAAVMRRFSASLGNLVGTLPAVIAALLVPLGELVRVRIPGTVLVERMGDAIKELNQEHGVSVEILKGILPPLWVEWALQPPGETGRR-QPTVAELAAHDGEYTTPRKAQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHALLRAAPTDRAREIQSNEFGYATRRALEIEEFLAERCPRCHRGREGEIITTVHARTCRRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGIAAQASEARKRQHYARPGHVSFDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALK 422
BLAST of mRNA_H-paniculata_contig84.16409.1 vs. uniprot
Match: A0A6H5KTK7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK7_9PHAE) HSP 1 Score: 238 bits (606), Expect = 6.960e-69 Identity = 145/376 (38.56%), Postives = 201/376 (53.46%), Query Frame = 2
Query: 215 LWMLENSVEHRQPAEEYAFFEAGRPANRFYLLLHQRPQATMSTGLGPLGFASAQSKCWSATVGSMCGMLPQIITDSSGPLGERAQAHLPWIPMVRSLGTIVRVLAEQEGVSAQQQAVALPPVLVAWTHRGRSEDGSLPTPDIDALGGLDAPGRNCRWLQGNVGNLVHMAKITTLLSLLDNLPPAGMPPGSDYPFGGIEPADAIRARFRSMSRTRALATQSAQPNDNTRTIPSAEYVLIERRFLGIEPCLAARCPCCGA----EDVTTRHAGTFHRAGAQVDQHQPLLHAVTRLLKRLGIRSTVEDGNPFTAGRDYRMDIVVPAEELRDALINAYRDKGLLIDVTHADPQSTGHLERGSATIDGSAAAISEARKSAH 1330
+W+LE ++ R E FF+ +RF L +Q+ QA +STG G LG +A + +SA++G++ G LP +I GPLGE + +P +V +G ++ L ++ GVS + LPP V W E G P + L D R Q +G V + ++ + L+++P +PP D P+GG E + AR RS A A P D R IPS E+V RR LG+E LA RCP C E +TT HA T R G QV+ H+P +A++R L L ++ VE G PFT R+ MDIV+ L +A YR+KG+L+DVTHADPQ+ HL GSAT DG+AA SEARK H
Sbjct: 3 MWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQQSQARLSTGAGGLGLPAAVMRRFSASLGNLVGTLPAVIAALRGPLGESVRVRIPGTVLVERMGDAIKELNQEHGVSVEILKGILPPSWVEWALEPTGETGRR-QPTVAELAAHDGESTTPRKAQHKLGKAVKI-QLEKFMESLEHVPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREREIITTVHARTCPRDGEQVNMHEPSKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGTAAEASEARKRQH 376
BLAST of mRNA_H-paniculata_contig84.16409.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE) HSP 1 Score: 248 bits (632), Expect = 6.440e-68 Identity = 167/458 (36.46%), Postives = 228/458 (49.78%), Query Frame = 2
Query: 188 ACALPDNGGLWMLENSVEHRQPAEEYAFFEAGRPANRFYLLLHQ--------RPQATMSTGLGPLGFASAQSKCWSATVGSMCGMLPQIITDSSGPLGERAQAHLPWIPMVRSLGTIVRVLAEQEGVSAQQQAVALPPVLVAWTHRGRSEDGSLPTPDIDALGGLDAPGRNCRWLQGNVGNLVHMAKITTLLSLLDNLPPAGMPPGSDYPFGGIEPADAIRARFRSMSRTRALATQSAQPNDNTRTIPSAEYVLIERRFLGIEPCLAARCPCC--GAED--VTTRHAGTFHRAGAQVDQHQPLL---------------------------HAVTRLLKRLGIRSTVEDGNPFTAGRDYRMDIVVPAEELRDALINAYRDKGLLIDVTHADPQSTGHLERGSATIDGSAAAISEARKSAHYARRGHASFDECCFKLPPLAVEIFGRLGKCGEELLKQV 1444
AC DN +W+LE ++ R +E FF+ +RF L QA +S G G LG +A + +SA++G++ G LP +I GPLGE + +P +V +G ++ L ++ +S + LPP V W E G P + L D R Q +G ++ ++ L+ L +LP +PP D P+GG E + AR RS A A P D R IPS E+V RR LG+E LA RCP C G E +TT A T R GAQV+ H+PL +A++R L L ++ VE G PFT R+ MDIV+ L +A YR+KG+L+DVT+ADPQ+ HL GSAT DG+AA SEARK HYAR GHA F E KL +AVE FGRLG+ G E + ++
Sbjct: 380 ACERLDNMVMWVLEATMGLRDAEDEEEFFQDDCQPDRFKRLAGALVPADAPPAAQARLSAGAGGLGLPAAVMRRFSASLGNLVGTLPAVIAALRGPLGESVRVRIPGTVLVERMGDAIKELNQEHAISVEILKGILPPSWVEWALEPTGETGRR-QPTVAELAAHDGESTTPRKAQHKLGKAINDIQLEKLMESLKHLPQEAVPPTRDNPYGGQEARNMAYARTRSSKGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHKGREGQIITTVQARTCSRDGAQVNMHEPLKXXXXXXXXXXXXXXXXXXXXXXXXXXKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTNADPQAQVHLRNGSATSDGTAAQASEARKRQHYARPGHA-FVERSLKLTTIAVESFGRLGEEGYEFIDEL 835
BLAST of mRNA_H-paniculata_contig84.16409.1 vs. uniprot
Match: A0A6H5JTC7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC7_9PHAE) HSP 1 Score: 243 bits (619), Expect = 9.660e-67 Identity = 161/414 (38.89%), Postives = 209/414 (50.48%), Query Frame = 2
Query: 257 EEYAFFEAGRPANRFYLLLHQRPQATMSTGLGPLGFASAQSKCWSATVGSMCGMLPQIITDSSGPLGERAQAHLPWIPMVRSLGTIVRV---LAEQEGVSAQQQAVALPPVLVAWTHRGRSEDGSLPTPDIDALGGLDAPGRNCRWLQGNVGNLVHMAKITTLLSLLDNLPPAGMPPGSDYPFGGIEPADAIRARFRSMSRTRALATQSAQPNDNTRTIPSAEYVLIERRFLGIEPCLAARCPCCG----AEDVTTRHAGTFHRAGAQVDQHQPLLHAVTRLLKRLGIRSTVEDGNPFTAGRDYRMDIVVPAEELRDALINAYRDKGLLIDVTHADPQSTGHLERGSATIDGSAAAISEARKSAHYARRGHASFDECCFKLPPLAVEIFGRLGKCGEELLKQVTGDTRDWRSTF 1477
+E FF+ +RF L +Q+ QA +STG G LG +A + +SA++G++ G L + L + GVS + LPP V W E G P + L D R Q +G V+ ++ L+ L +LP +PP SD P+GG E + AR RS A A P D R IPS E+V RR LG+E LA RCP C E +TT HA T R GAQV+ H+PL +A++R L L ++ VE G PFT R+ MD+V+ L +A YR+KG+L+DVTHADPQ+ HL GSAT DG+AA SEARK HYAR GH SFDE FKL LAVE FGRLG+ G + G T D + F
Sbjct: 392 DEEEFFQDDCQPDRFKLKPYQQAQARLSTGAGGLGLPAAVMRRFSASLGNLVGTLFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNREHGVSVKILKGILPPSWVEWAFEPPGETGRR-QPTVAELAAYDGESTTPRKAQHKLGKAVNKIQLEKLIESLGHLPQEAVPPTSDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHARTCPRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDLVIRPGALTNASSPGYRNKGVLLDVTHADPQAQVHLRNGSATSDGTAAQASEARKRQHYARPGHVSFDERSFKLTTLAVESFGRLGEEGYD------GGTMDLKGVF 798
BLAST of mRNA_H-paniculata_contig84.16409.1 vs. uniprot
Match: A0A6H5KDZ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDZ4_9PHAE) HSP 1 Score: 218 bits (555), Expect = 2.990e-61 Identity = 136/334 (40.72%), Postives = 175/334 (52.40%), Query Frame = 2
Query: 503 LGTIVRVLAEQEGVSAQQQAVALPPVLVAWTHRGRSEDGSLPTPDIDALGGLDAPGRNCRWLQGNVGNLVHMAKITTLLSLLDNLPPAGMPPGSDYPFGGIEPADAIRARFRSMSRTRALATQSAQPNDNTRTIPSAEYVLIERRFLGIEPCLAARCPCCG----AEDVTTRHAGTFHRAGAQVDQHQPLLHAVTRLLKRLGIRSTVEDGNPFTAGRDYRMDIVVPAEELRDALINAYRDKGLLIDVTHADPQSTGHLERGSATIDGSAAAISEARKSAHYARRGHASFDECCFKLPPLAVEIFGRLGKCGEELLKQVTGDTRDWRSTFLLGLK 1492
+G ++ L ++ GVS + LPP V W E P + L D R Q +G V ++ + L++LP +P D P+GG E + AR RS A A P + R IP E+V RR LG+E LA RCP C E +TT HA T R GAQV+ H+PL +A++R L L ++ VE G PFT R+ MDIV+ L +A YR+KG+L+DVTHADPQ+ HL GSAT DG AA SEARK HYAR GH SFDE FKL LAVE FGRLG+ G E + ++ R + LK
Sbjct: 1 MGDAIKELNQEHGVSVEILKGILPPSWVEWALEPAGETRRR-QPTVAELAAHDEESTTPRKAQHKLGKAVSKIQLEKFMESLEHLPQEAVPHTRDNPYGGQEARNMAYARTRSSQGQGEHAFLKAAPTERAREIPLNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHARTCRRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVHLRNGSATSDGIAAQASEARKRQHYARPGHVSFDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALK 333
BLAST of mRNA_H-paniculata_contig84.16409.1 vs. uniprot
Match: A0A6H5KUZ8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ8_9PHAE) HSP 1 Score: 225 bits (573), Expect = 5.030e-61 Identity = 133/365 (36.44%), Postives = 191/365 (52.33%), Query Frame = 2
Query: 188 ACALPDNGGLWMLENSVEHRQPAEEYAFFEAGRPANRFYLLLHQRPQATMSTGLGPLGFASAQSKCWSATVGSMCGMLPQIITDSSGPLGERAQAHLPWIPMVRSLGTIVRVLAEQEGVSAQQQAVALPPVLVAWTHRGRSEDGSLPTPDIDALGGLDAPGRNCRWLQGNVGNLVHMAKITTLLSLLDNLPPAGMPPGSDYPFGGIEPADAIRARFRSMSRTRALATQSAQPNDNTRTIPSAEYVLIERRFLGIEPCLAARCPCCG----AEDVTTRHAGTFHRAGAQVDQHQPLLHAVTRLLKRLGIRSTVEDGNPFTAGRDYRMDIVVPAEELRDALINAYRDKGLLIDVTHADPQSTGHLER 1270
AC DN +W+LE ++ R E FF+ +RF L +Q+ QA +STG G LG +A + +SA++G++ G LP +I GPLGE + +P +V +G ++ L ++ +S + +PP V W E G P + L D R Q +G ++ ++ + L++LP +PP D P+GG E + AR RS A A P D R IPS E+V RR LG+E LA RCP C E +TT HA T R GAQV+ H+PL +A++R L L ++ VE G PFT R+ MDIV+ L +A YR+KG+L+DVTHADPQ+ + R
Sbjct: 287 ACKRLDNMVMWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQQAQARLSTGAGGLGLPAAVMRRFSASLGNLVGTLPAVIAALRGPLGESVRVRIPGTVLVERMGDAIKELNQEHAISVEILKGIIPPSWVEWALEPTGETGRR-QPTVAELAAHDGESTTPRKAQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHRGREGEIITTVHARTCRRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLDVTHADPQAQVAISR 650 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig84.16409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig84.16409.1 >prot_H-paniculata_contig84.16409.1 ID=prot_H-paniculata_contig84.16409.1|Name=mRNA_H-paniculata_contig84.16409.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=427bp MLENSVEHRQPAEEYAFFEAGRPANRFYLLLHQRPQATMSTGLGPLGFASback to top mRNA from alignment at H-paniculata_contig84:51186..53070+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig84.16409.1 ID=mRNA_H-paniculata_contig84.16409.1|Name=mRNA_H-paniculata_contig84.16409.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1885bp|location=Sequence derived from alignment at H-paniculata_contig84:51186..53070+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig84:51186..53070+ >mRNA_H-paniculata_contig84.16409.1 ID=mRNA_H-paniculata_contig84.16409.1|Name=mRNA_H-paniculata_contig84.16409.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2562bp|location=Sequence derived from alignment at H-paniculata_contig84:51186..53070+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |