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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1527 |
| Cds size | 936 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8398.16404.1 >prot_H-paniculata_contig8398.16404.1 ID=prot_H-paniculata_contig8398.16404.1|Name=mRNA_H-paniculata_contig8398.16404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=312bp
MGWLKSLVNFNCCNEEGHTTPSMGWLNSDPNVNCRNEEGHATPSMDWLNL
NPNDNCCNEEGHATPSMGWLNLNPNVNCCNEESHAIPSMDWLKTSLNVNC
CNEEGHAIHSMGWLNLNPNVNCCNEEGHVTPAMDWLKFSPNVNCCNEEGH
VTCPMALSKFRPNVNCCNEEGHVTHSMGWLKFSPNVNCCNEEGHAIPSMD
WLNSHPNVNCCNEEGHVTCPMGLSKFHPNVNCCNEEGHVTRSMGWLKFSP
NVNRCNEEGHTIHSMDWLNMEVQRPMFPPNKIRRTSGGHTTPSRLWLNLI
PNFTYSTFAKR* back to topmRNA from alignment at H-paniculata_contig8398:4504..6360- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig8398.16404.1 ID=mRNA_H-paniculata_contig8398.16404.1|Name=mRNA_H-paniculata_contig8398.16404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1857bp|location=Sequence derived from alignment at H-paniculata_contig8398:4504..6360- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCATCAATAACGCATGACGACTAACCACGAAGTAACGAGCTGTCAGTGC
TCAGTTAACTCTACTCAAGTTTCTTGCCATGAAGTTAAAAATTCGGGGTT
ATTACATGACATCCTTCAAAAACAATTGAGCACACAAACCGCAAATTCGA
AGCAAGCCGAGTTTATCACAAACGAGGGTGGCGCCACGGCACATACCCGT
GCTATTTTTGGCTGTTTCGTGACAGCACGCAATTTCCGAAGCTGTTGCCT
CCCAACCGGAACAACCCGAACCGCTCTTTCGTTCGGTTGTAATTTGACAA
CACCGCCTTCGTAAGAACTAGTTGGGGACTAAACCAAAGGAACCACGCTG
TAGGGTTACAGTCCCTACTCCAAAGCTTCCCCTTATACAGGCCAGCCTCG
ACCATTTCCTCTCTTTACCTGAGGTTGCTCTCGACTCACACTACTAACGA
AAGACCACATCGATGGGCTCGTACTTTGAGTGCAACCTCTGACACTGCAG
CGCGTCAATCCACCTTCCACCACCAACACGCTGGCTAAACCCTTCCCCCA
GCACCAACTGTTGCAGCGAAGCAGGCCATGCTACCCCCTTAATGGGCTGG
TTGAAGTCCCTCGTGAATTTCAACTGCTGCAACGAAGAAGGCCATACTAC
CCCCTCAATGGGCTGGTTGAACTCAGACCCGAACGTCAACTGCCGCAACG
AAGAAGGCCATGCTACCCCCTCAATGGACTGGTTGAACTTAAACCCGAAC
GACAACTGCTGCAACGAAGAAGGCCATGCTACCCCCTCAATGGGCTGGTT
GAACTCAAACCCGAACGTCAACTGCTGCAACGAAGAAGGCCACGCTACCT
CCTTAATAGGCTGGTTGAAAACCTCCCTGAATGTCAACTGCTGCAACGAA
GAAGGCCATGCTACCCCCTCAATGGGCTGGTTGAAGCCCCTTGTGAATTT
CAACTGCTGCAACGAAGAAGGCCATGCTACCCCCTCGATGGGCTGGTTGA
ACTCATACCCGAACGACAACTGCTGCAACGAAGAAGGCCATACTACCCCC
TCAATGGGCTTGTTGAATTTAAACCCGAACGACAACTGCTGCAACGAAGA
AGGCCATGCTACCCCCTCAATGGGCTGGTTGAACTTAAACCCGAACGTCA
ACTGCTGCAACGAAGAAAGCCATGCAATCCCCTCAATGGACTGGTTGAAA
ACCTCCCTAAATGTCAACTGCTGCAATGAAGAAGGCCATGCTATCCACTC
AATGGGCTGGTTGAACTTAAACCCGAACGTCAACTGCTGCAACGAAGAAG
GCCATGTCACCCCCGCAATGGACTGGTTGAAGTTCTCCCCGAACGTCAAC
TGCTGCAACGAAGAAGGCCATGTCACCTGCCCAATGGCCTTGTCGAAGTT
CCGCCCGAACGTTAACTGTTGCAACGAGGAAGGCCATGTCACACACTCGA
TGGGCTGGTTGAAGTTCTCCCCAAACGTCAACTGCTGCAACGAAGAAGGC
CATGCTATCCCCTCAATGGACTGGTTGAATTCCCACCCGAACGTCAACTG
CTGCAACGAAGAAGGCCATGTCACCTGCCCAATGGGCTTGTCGAAGTTCC
ACCCGAACGTTAACTGTTGCAACGAGGAAGGCCATGTCACACGCTCGATG
GGCTGGTTGAAATTCTCCCCGAACGTCAACCGCTGCAACGAAGAAGGCCA
TACTATCCACTCAATGGACTGGTTGAACATGGAGGTGCAGCGCCCAATGT
TTCCGCCAAACAAGATCCGCCGAACCTCCGGGGGCCATACTACGCCCTCC
AGACTGTGGTTGAATCTGATCCCGAACTTCACGTATTCCACATTCGCCAA
GAGATAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig8398:4504..6360- >mRNA_H-paniculata_contig8398.16404.1 ID=mRNA_H-paniculata_contig8398.16404.1|Name=mRNA_H-paniculata_contig8398.16404.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1872bp|location=Sequence derived from alignment at H-paniculata_contig8398:4504..6360- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCTGGTTGAAGTCCCTCGTGAATTTCAACTGCTGCAACGAAGAAGG
CCATACTACCCCCTCAATGGGCTGGTTGAACTCAGACCCGAACGTCAACT
GCCGCAACGAAGAAGGCCATGCTACCCCCTCAATGGACTGGTTGAACTTA
AACCCGAACGACAACTGCTGCAACGAAGAAGATGGGCTGGTTGAAGTCCC
TCGTGAATTTCAACTGCTGCAACGAAGAAGGCCATACTACCCCCTCAATG
GGCTGGTTGAACTCAGACCCGAACGTCAACTGCCGCAACGAAGAAGGCCA
TGCTACCCCCTCAATGGACTGGTTGAACTTAAACCCGAACGACAACTGCT
GCAACGAAGAAGGCCATGCTACCCCCTCAATGGGCTGGTTGAACTTAAAC
CCGAACGTCAACTGCTGCAACGAAGAAAGCCATGCAATCCCCTCAATGGA
CTGGTTGAAAACCTCCCTAAATGTCAACTGCTGCAATGAAGAAGGCCATG
CTATCCACTCAATGGGCTGGTTGAACTTAAACCCGAACGTCAACTGCTGC
AACGAAGAAGGCCATGTCACCCCCGCAATGGACTGGTTGAAGTTCTCCCC
GAACGTCAACTGCTGCAACGAAGAAGGCCATGTCACCTGCCCAATGGCCT
TGTCGAAGTTCCGCCCGAACGTTAACTGTTGCAACGAGGAAGGCCATGTC
ACACACTCGATGGGCTGGTTGAAGTTCTCCCCAAACGTCAACTGCTGCAA
CGAAGAAGGCCATGCTATCCCCTCAATGGACTGGTTGAATTCCCACCCGA
ACGTCAACTGCTGCAACGAAGAAGGCCATGTCACCTGCCCAATGGGCTTG
TCGAAGTTCCACCCGAACGTTAACTGTTGCAACGAGGAAGGCCATGTCAC
ACGCTCGATGGGCTGGTTGAAATTCTCCCCGAACGTCAACCGCTGCAACG
AAGAAGGCCATACTATCCACTCAATGGACTGGTTGAACATGGAGGTGCAG
CGCCCAATGTTTCCGCCAAACAAGATCCGCCGAACCTCCGGGGGCCATAC
TACGCCCTCCAGACTGTGGTTGAATCTGATCCCGAACTTCACGTATTCCA
CATTCGCCAAGAGATAGGCCATGCTACCCCCTCAATGGGCTGGTTGAACT
TAAACCCGAACGTCAACTGCTGCAACGAAGAAAGCCATGCAATCCCCTCA
ATGGACTGGTTGAAAACCTCCCTAAATGTCAACTGCTGCAATGAAGAAGG
CCATGCTATCCACTCAATGGGCTGGTTGAACTTAAACCCGAACGTCAACT
GCTGCAACGAAGAAGGCCATGTCACCCCCGCAATGGACTGGTTGAAGTTC
TCCCCGAACGTCAACTGCTGCAACGAAGAAGGCCATGTCACCTGCCCAAT
GGCCTTGTCGAAGTTCCGCCCGAACGTTAACTGTTGCAACGAGGAAGGCC
ATGTCACACACTCGATGGGCTGGTTGAAGTTCTCCCCAAACGTCAACTGC
TGCAACGAAGAAGGCCATGCTATCCCCTCAATGGACTGGTTGAATTCCCA
CCCGAACGTCAACTGCTGCAACGAAGAAGGCCATGTCACCTGCCCAATGG
GCTTGTCGAAGTTCCACCCGAACGTTAACTGTTGCAACGAGGAAGGCCAT
GTCACACGCTCGATGGGCTGGTTGAAATTCTCCCCGAACGTCAACCGCTG
CAACGAAGAAGGCCATACTATCCACTCAATGGACTGGTTGAACATGGAGG
TGCAGCGCCCAATGTTTCCGCCAAACAAGATCCGCCGAACCTCCGGGGGC
CATACTACGCCCTCCAGACTGTGGTTGAATCTGATCCCGAACTTCACGTA
TTCCACATTCGCCAAGAGATAG back to top
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