mRNA_H-paniculata_contig8393.16399.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8393.16399.1 vs. uniprot
Match: D7G7A6_ECTSI (GTP-binding nuclear protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7A6_ECTSI) HSP 1 Score: 422 bits (1085), Expect = 3.480e-140 Identity = 207/213 (97.18%), Postives = 209/213 (98.12%), Query Frame = 2
Query: 122 MAQEMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFVIDQADQQRIQNEIDAAAAVPLPDEDDDL 760
MAQEMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGD NLQFVEQPALQPPEFVI+QADQ + Q EIDAAAAVPLPDEDDDL
Sbjct: 1 MAQEMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDANLQFVEQPALQPPEFVINQADQLKFQQEIDAAAAVPLPDEDDDL 213
BLAST of mRNA_H-paniculata_contig8393.16399.1 vs. uniprot
Match: A0A835YR82_9STRA (GTP-binding nuclear protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR82_9STRA) HSP 1 Score: 393 bits (1009), Expect = 7.920e-129 Identity = 191/210 (90.95%), Postives = 200/210 (95.24%), Query Frame = 2
Query: 131 EMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFVIDQADQQRIQNEIDAAAAVPLPDEDDDL 760
EMPEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEVRPL FHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVP WHRDLTRVCE+IPIVL GNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KLVGDPNL FVEQPAL PPEF +D+AD QR + E++ AAA+PLPDEDDDL
Sbjct: 3 EMPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVRPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPYWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLMFVEQPALAPPEFQLDKADVQRFEQELEQAAAIPLPDEDDDL 212
BLAST of mRNA_H-paniculata_contig8393.16399.1 vs. uniprot
Match: A0A7S3ZPZ2_9STRA (GTP-binding nuclear protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPZ2_9STRA) HSP 1 Score: 377 bits (968), Expect = 4.350e-121 Identity = 184/216 (85.19%), Postives = 196/216 (90.74%), Query Frame = 2
Query: 113 TVTMAQEMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFVIDQADQQRIQNEIDAAAAVPLPDEDDDL 760
T++ EMPEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEV PL FHTNRGPIKFNVWDTAGQE+FGGLRDGYYIQGQCAI+MFDVTSRITYKNVPNWHRDLTRVCE+IPIVL GNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GD NL FVE PAL PPEF ID AD R + E+ AA +PLP++DDDL
Sbjct: 103 TLSATMEMPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQERFGGLRDGYYIQGQCAIVMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLCGDNNLHFVEAPALAPPEFNIDAADAARYEAELREAANIPLPEDDDDL 318
BLAST of mRNA_H-paniculata_contig8393.16399.1 vs. uniprot
Match: A0A1E7FMC8_9STRA (GTP-binding nuclear protein n=19 Tax=Ochrophyta TaxID=2696291 RepID=A0A1E7FMC8_9STRA) HSP 1 Score: 371 bits (952), Expect = 2.820e-120 Identity = 181/207 (87.44%), Postives = 191/207 (92.27%), Query Frame = 2
Query: 137 PEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFVIDQADQQRIQNEIDAAAAVPLPDEDDD 757
PEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEV PL FHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GD L FVE PALQPPEF D+ + + + E+ AAAA PLP++DDD
Sbjct: 7 PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLNFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNALHFVEAPALQPPEFQFDENLKNQYEQELQAAAAQPLPEDDDD 213
BLAST of mRNA_H-paniculata_contig8393.16399.1 vs. uniprot
Match: W7TTE5_9STRA (GTP-binding nuclear protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTE5_9STRA) HSP 1 Score: 370 bits (949), Expect = 7.340e-120 Identity = 181/213 (84.98%), Postives = 190/213 (89.20%), Query Frame = 2
Query: 122 MAQEMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFVIDQADQQRIQNEIDAAAAVPLPDEDDDL 760
M +PEFKLILVGDGGVGKTTFV+RH+TGEFEK+YVATLGVEV PL FHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVLCGNKVEIKDRKVK KQI FHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GD NL FVE PAL PPE DQ D R + E+ AAA+PLPDEDDDL
Sbjct: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 213
BLAST of mRNA_H-paniculata_contig8393.16399.1 vs. uniprot
Match: A0A7R9ZLZ6_9STRA (GTP-binding nuclear protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLZ6_9STRA) HSP 1 Score: 369 bits (947), Expect = 1.130e-118 Identity = 184/212 (86.79%), Postives = 193/212 (91.04%), Query Frame = 2
Query: 122 MAQEMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFVIDQADQQRIQNEIDAAAAVPLPDEDDD 757
M+QE PEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEV PL FHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVL GNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GD L FVE PALQPPEF ID+ + R + EI AA PLP++DDD
Sbjct: 59 MSQE-PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLTFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNALHFVEAPALQPPEFTIDEQTKARYEAEIAEAANKPLPEDDDD 269
BLAST of mRNA_H-paniculata_contig8393.16399.1 vs. uniprot
Match: A0A7S3P9E4_9STRA (GTP-binding nuclear protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P9E4_9STRA) HSP 1 Score: 365 bits (937), Expect = 4.830e-118 Identity = 179/209 (85.65%), Postives = 193/209 (92.34%), Query Frame = 2
Query: 131 EMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFVIDQADQQRIQNEIDAAAAVPLPDEDDD 757
+MPEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEV PL FHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVL GNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GD L FV+ ALQPPE I + Q++++ +I+AAAA PLP++DDD
Sbjct: 5 QMPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNALHFVQAVALQPPEVKISEEAQRQLEADINAAAAQPLPEDDDD 213
BLAST of mRNA_H-paniculata_contig8393.16399.1 vs. uniprot
Match: A0A7S2CHG2_9STRA (GTP-binding nuclear protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHG2_9STRA) HSP 1 Score: 365 bits (937), Expect = 8.210e-118 Identity = 176/208 (84.62%), Postives = 191/208 (91.83%), Query Frame = 2
Query: 134 MPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFVIDQADQQRIQNEIDAAAAVPLPDEDDD 757
+PEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEV PL FHTNRG ++FNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVLCGNKV+IKDRKVKAKQITFHRKKNLQY+DISAKSNY FE+PFLWLAK+LVGD LQFVE PAL PPEF I D R + E+D AAA+PLP++DD+
Sbjct: 21 VPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLSFHTNRGALRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVDIKDRKVKAKQITFHRKKNLQYFDISAKSNYKFEQPFLWLAKQLVGDKKLQFVEAPALAPPEFNISTEDAARYERELDEAAAMPLPEDDDE 228
BLAST of mRNA_H-paniculata_contig8393.16399.1 vs. uniprot
Match: A0A024UPD8_9STRA (GTP-binding nuclear protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UPD8_9STRA) HSP 1 Score: 361 bits (927), Expect = 1.380e-116 Identity = 175/213 (82.16%), Postives = 192/213 (90.14%), Query Frame = 2
Query: 122 MAQEMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFVIDQADQQRIQNEIDAAAAVPLPDEDDDL 760
MA +MPEFKLILVGDGGVGKTTFVKRH+TGEFEKKYVATLGVEV PL F TN GPIKFN WDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRI+YKNVPNWHRDL RVCE+IPIVLCGNKVE+KDRKVKAKQITFHRKKNLQY+DISAKSNY FEKPFLWLA+KLVGD +L FVE A+ PPE VID+ ++R++ E+ AA P+PDEDDD+
Sbjct: 1 MAAQMPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLKFETNFGPIKFNCWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRISYKNVPNWHRDLFRVCENIPIVLCGNKVEVKDRKVKAKQITFHRKKNLQYFDISAKSNYQFEKPFLWLARKLVGDNSLTFVEAAAIAPPEVVIDEEHKRRLEAELAAAVNAPIPDEDDDI 213
BLAST of mRNA_H-paniculata_contig8393.16399.1 vs. uniprot
Match: A0A7S1TE31_9RHOD (GTP-binding nuclear protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TE31_9RHOD) HSP 1 Score: 361 bits (927), Expect = 1.380e-116 Identity = 175/213 (82.16%), Postives = 191/213 (89.67%), Query Frame = 2
Query: 122 MAQEMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDPNLQFVEQPALQPPEFVIDQADQQRIQNEIDAAAAVPLPDEDDDL 760
M MP FKLILVGDGG GKTTFVKRH+TGEFEKKY+ATLGVEV PL FHTNRGPI F+VWDTAGQEKFGGLRDGYYIQGQ AIIMFDVTSR+TYKNVPNWHRDL RVCE++PIVLCGNKV+IK+RKVKAK ITFHRKKNLQYYDISAKSNYNFEKPFLWLA+KLVGDPNL FVE PAL P E ID+ ++++ EIDAAA VPLPD+DDD+
Sbjct: 1 MDGSMPRFKLILVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLLFHTNRGPICFDVWDTAGQEKFGGLRDGYYIQGQAAIIMFDVTSRVTYKNVPNWHRDLVRVCENVPIVLCGNKVDIKERKVKAKMITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLVFVEAPALAPAEVTIDEEYKRQMAAEIDAAAQVPLPDDDDDM 213 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8393.16399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8393.16399.1 >prot_H-paniculata_contig8393.16399.1 ID=prot_H-paniculata_contig8393.16399.1|Name=mRNA_H-paniculata_contig8393.16399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=214bp MAQEMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHback to top mRNA from alignment at H-paniculata_contig8393:1224..10381+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8393.16399.1 ID=mRNA_H-paniculata_contig8393.16399.1|Name=mRNA_H-paniculata_contig8393.16399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9158bp|location=Sequence derived from alignment at H-paniculata_contig8393:1224..10381+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8393:1224..10381+ >mRNA_H-paniculata_contig8393.16399.1 ID=mRNA_H-paniculata_contig8393.16399.1|Name=mRNA_H-paniculata_contig8393.16399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1284bp|location=Sequence derived from alignment at H-paniculata_contig8393:1224..10381+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |