mRNA_H-paniculata_contig8389.16396.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8389.16396.1 vs. uniprot
Match: D8LEN9_ECTSI (Membrane acyl-CoA binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN9_ECTSI) HSP 1 Score: 320 bits (821), Expect = 8.570e-95 Identity = 168/252 (66.67%), Postives = 195/252 (77.38%), Query Frame = 2
Query: 2 IELKKKKVNERLEAERGVEEAKAHPFPREVRFWTVKDVGYFLHSLGLGQYRRAFEEAAVDGEFLLALDASDCADVLGVSHALHSKKLFLAINKLRPLSADEMRKKVVVEREENADNTRGNDRPDVQTVMSQVRNGRMKRVEESLEMGFSVDTKDEHGNTPLIVACQ-------------------NVNLQMSEMLLRRGAKINHRNGGGNTALHYAMAYEPNGLLGEMLISNGADDSIENKDSLSCYDGLGG 700
I K K + E++EA+ +EEA AHPFP EVRFWT +DVG+FL +LGL QYR AFEEAAVDG+FLLALDA+DCADVLGV HALHSKKLFLAI+KLRPL A+E RKK VVEREE AD RG+ PDV+TV SQVRNGR+KRVE+SLE GFS+DT DEHGNT L+VACQ ++ Q+ EMLLRRGA +NHRNG GNT LHYAMAY+ G+LGEMLIS G DD++ N+D LSCYDGLGG
Sbjct: 2518 IGRKNKVLQEKMEAQEEMEEANAHPFPPEVRFWTKEDVGFFLTTLGLRQYRAAFEEAAVDGDFLLALDANDCADVLGVEHALHSKKLFLAIDKLRPLGAEERRKKAVVEREEFADQNRGDTAPDVETVFSQVRNGRLKRVEDSLEKGFSIDTTDEHGNTALLVACQAGFAKQWTGDALKPADAVYHIR-QLCEMLLRRGADVNHRNGRGNTPLHYAMAYDTQGVLGEMLISRGGDDTVTNRDGLSCYDGLGG 2768
BLAST of mRNA_H-paniculata_contig8389.16396.1 vs. uniprot
Match: A0A7S1UK14_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK14_9STRA) HSP 1 Score: 221 bits (562), Expect = 4.510e-67 Identity = 115/221 (52.04%), Postives = 153/221 (69.23%), Query Frame = 2
Query: 53 VEEAKAHPFPREVRFWTVKDVGYFLHSLGLGQYRRAFEEAAVDGEFLLALDASDCADVLGVSHALHSKKLFLAINKLRPLSADEMRKKVVVEREENADNTR------GNDRPDVQTVMSQVRNGRMKRVEESLEMGFSVDTKDEHGNTPLIVACQNVNLQMSEMLLRRGAKINHRNGGGNTALHYAMAYEPNGLLGEMLISNGADDSIENKDSLSCYDGLG 697
V++A PFP +VR WTV+DV +L +L L QY+RAFE+A+VDG FL+ L +D ++VLG+ H LH +K+ A KL PL+ +E K VV E++A+ R G P + V SQ RNGR+KRVEESL +GF +D +D GNT L+VA Q N +++ +L+ RGA +NH+N GNTALHYAMAY+P G++GE LI GADDS+EN LSCYDGLG
Sbjct: 3 VKDAMTLPFPEDVRLWTVEDVSRWLDTLRLSQYKRAFEDASVDGNFLIELRETDMSEVLGMEHKLHIRKVVTARAKLMPLNEEEQSKLNVVREEKSAELVRAGQAAPGEGVPKLDAVFSQARNGRIKRVEESLNLGFPIDAEDAKGNTLLMVAVQQTNQKLTAILISRGADLNHQNAAGNTALHYAMAYDPEGVMGEFLIEKGADDSLENVVGLSCYDGLG 223
BLAST of mRNA_H-paniculata_contig8389.16396.1 vs. uniprot
Match: A0A7S3LK43_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LK43_9STRA) HSP 1 Score: 220 bits (560), Expect = 9.350e-66 Identity = 111/222 (50.00%), Postives = 158/222 (71.17%), Query Frame = 2
Query: 47 RGVEEAKA---HPFPREVRFWTVKDVGYFLHSLGLGQYRRAFEEAAVDGEFLLALDASDCADVLGVSHALHSKKLFLAINKLRPLSADEMRKKVVVEREENADNTRGNDR---PDVQTVMSQVRNGRMKRVEESLEMGFSVDTKDEHGNTPLIVACQNVNLQMSEMLLRRGAKINHRNGGGNTALHYAMAYEPNGLLGEMLISNGADDSIENKDSLSCYDGL 694
+ +EEA+ PFP ++R W+V+DVG +L +L L QY++AF EA+VDG+FL+ L D D+LG+ H+LH +K+ + KLRPL+ E RKK +VE+EE A R P+V+TV SQ+RNGR RVE++L++G+ + D HGN+ LI+A QN+N ++ ++LL RGA INH+N GNTA+HYAM+Y+P G LGE LI GADD++EN+ LS YDG+
Sbjct: 77 KAIEEAQKLLKKPFPNDIRKWSVEDVGRWLDTLSLSQYKKAFSEASVDGDFLMELRPEDMRDILGMGHSLHVQKVIVTREKLRPLNEMEERKKFMVEQEELARQNRDQPSEPIPEVETVFSQIRNGRYNRVEKALDLGYEANDTDSHGNSALIIAAQNLNKRICDLLLNRGANINHQNSQGNTAMHYAMSYDPEGTLGEFLIGRGADDTLENQLGLSPYDGI 298
BLAST of mRNA_H-paniculata_contig8389.16396.1 vs. uniprot
Match: A0A7S2FRG1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FRG1_9STRA) HSP 1 Score: 220 bits (560), Expect = 4.540e-65 Identity = 120/235 (51.06%), Postives = 163/235 (69.36%), Query Frame = 2
Query: 8 LKKKKVNERLEAERGVEE----AKAHPFPREVRFWTVKDVGYFLHSLGLGQYRRAFEEAAVDGEFLLALDASDCADVLGVSHALHSKKLFLAINKLRPLSADEMRKKVVVEREENADNTR-GNDRPDVQTVMSQVRNGRMKRVEESLEMGFSVDTKDEHGNTPLIVACQNVNLQMSEMLLRRGAKINHRNGGGNTALHYAMAYEPNGLLGEMLISNGADDSIENKDSLSCYDGLG 697
LKK+++ L+A R EE +KA PFP+EVR W+V DV +L +L L QY +AF+EA+VDGEFLL L D A VLG+ H LH +K+ LA +KLRPLS E KV V REE+A R G PD++TV SQ RN R++R+E+SL F VD++D+ GNT L++ QN N ++ E++L RG+ INH+N GN+ALH+ MAY+ +G LGE LI GA+D++ N D L+ YDG+G
Sbjct: 119 LKKQQLE--LDAARNAEEQAKQSKAEPFPKEVRLWSVTDVCRWLDTLSLQQYTKAFKEASVDGEFLLELREEDLAQVLGMEHKLHVRKVILARDKLRPLSEQEKMMKVAVVREEDAQKDRAGTGVPDLETVFSQARNSRLRRLEDSLNADFPVDSQDDKGNTLLLIGAQNCNRKLMELVLARGSNINHQNAHGNSALHFVMAYDTDGTLGEFLIQKGANDTLANVDGLTPYDGIG 351
BLAST of mRNA_H-paniculata_contig8389.16396.1 vs. uniprot
Match: A0A7S1XSI4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSI4_9STRA) HSP 1 Score: 214 bits (544), Expect = 4.410e-63 Identity = 116/216 (53.70%), Postives = 148/216 (68.52%), Query Frame = 2
Query: 59 EAKAHPFPREVRFWTVKDVGYFLHSLGLGQYRRAFEEAAVDGEFLLALDASDCADVLGVSHALHSKKLFLAINKLRPLSADEMRKKVVVEREENADNTRGNDR---PDVQTVMSQVRNGRMKRVEESLEMGFSVDTKDEHGNTPLIVACQNVNLQMSEMLLRRGAKINHRNGGGNTALHYAMAYEPNGLLGEMLISNGADDSIENKDSLSCYDGLG 697
EA PFP E+ W+V DV +L +L LG Y++AFEEA VDG FLL L D +VLG+ H LH +K+ +A KLRPL E+ KK VV REE AD RG+ P + V SQ RNGR+KR+EESL +GF+ + +D +GNT LIVA Q N ++ EML+ RGA +NH+N GNTALH+AMAY+ G +GE LI+ GADDS+EN L+ YDGLG
Sbjct: 103 EAAKEPFPEEILLWSVHDVSRWLDTLSLGVYKQAFEEARVDGPFLLELRDEDMMEVLGIEHKLHVRKIVVAREKLRPLDEQELIKKDVVTREEAADAGRGDAAGGIPPLDVVFSQCRNGRIKRLEESLLVGFNKEAEDVNGNTLLIVAAQQTNKKVIEMLVNRGANVNHQNKVGNTALHFAMAYDTEGAIGEYLITKGADDSLENLSGLTPYDGLG 318
BLAST of mRNA_H-paniculata_contig8389.16396.1 vs. uniprot
Match: A0A7S1Y181_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y181_9STRA) HSP 1 Score: 221 bits (562), Expect = 1.110e-62 Identity = 116/224 (51.79%), Postives = 154/224 (68.75%), Query Frame = 2
Query: 44 ERGVEEAKAHPFPREVRFWTVKDVGYFLHSLGLGQYRRAFEEAAVDGEFLLALDASDCADVLGVSHALHSKKLFLAINKLRPLSADEMRKKVVVEREENADNTR------GNDRPDVQTVMSQVRNGRMKRVEESLEMGFSVDTKDEHGNTPLIVACQNVNLQMSEMLLRRGAKINHRNGGGNTALHYAMAYEPNGLLGEMLISNGADDSIENKDSLSCYDGLG 697
E V++A PFP +VR WTV+DV +L +L L QY+RAFE+A+VDG FL+ L +D ++VLG+ H LH +K+ A KL PL+ +E K VV E++A+ R G P + V SQ RNGR+KRVEESL +GF +D +D GNT L+VA Q N +++ +L+ RGA +NH+N GNTALHYAMAY+P G++GE LI GADDS+EN LSCYDGLG
Sbjct: 389 EEEVKDAMNLPFPEDVRLWTVEDVSRWLDTLRLSQYKRAFEDASVDGNFLIELRETDMSEVLGMEHKLHIRKVVTARAKLMPLNEEEQSKLNVVREEKSAELVRAGQAAPGEGVPKLDAVFSQARNGRIKRVEESLNLGFPIDAEDAKGNTLLMVAVQQTNQKLTAILISRGADLNHQNAAGNTALHYAMAYDPEGVMGEFLIEKGADDSLENVVGLSCYDGLG 612
BLAST of mRNA_H-paniculata_contig8389.16396.1 vs. uniprot
Match: A0A6V1RC42_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RC42_HETAK) HSP 1 Score: 209 bits (533), Expect = 1.840e-62 Identity = 113/229 (49.34%), Postives = 154/229 (67.25%), Query Frame = 2
Query: 11 KKKKVNERLEAERGVEEAKAHPFPREVRFWTVKDVGYFLHSLGLGQYRRAFEEAAVDGEFLLALDASDCADVLGVSHALHSKKLFLAINKLRPLSADEMRKKVVVEREENADNTRGNDRPDVQTVMSQVRNGRMKRVEESLEMGFSVDTKDEHGNTPLIVACQNVNLQMSEMLLRRGAKINHRNGGGNTALHYAMAYEPNGLLGEMLISNGADDSIENKDSLSCYDGLG 697
K+ + E A+R +EA+ FP ++ WTV+DVG +L +L L QY +AF + +VDG+FL+ L SD +LGVSH LH +K+ + +L PLSA E K ++ EE A+ R + PD TV SQVRN R+KRVEE+L +G + +DE GN+ L+VA QN+N +M E+LL RGA +NH+N GNTALH+AM Y+P G LGE LI +GADD IEN L+ YDG+G
Sbjct: 16 KRAALAEAQRAKRDADEAELRAFPEDLALWTVEDVGRWLTTLNLPQYVQAFRDGSVDGKFLMDLRDSDIQQMLGVSHPLHVRKITVNRERLLPLSAQEQGKMSRIKEEEKANQDR--ELPDKDTVFSQVRNNRIKRVEEALALGVDPNLEDERGNSLLMVAAQNLNRRMCELLLARGASVNHQNAVGNTALHFAMTYDPEGTLGEFLIMHGADDGIENGQGLTAYDGIG 242
BLAST of mRNA_H-paniculata_contig8389.16396.1 vs. uniprot
Match: A0A7S4ECN9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECN9_9STRA) HSP 1 Score: 223 bits (569), Expect = 3.910e-62 Identity = 119/220 (54.09%), Postives = 150/220 (68.18%), Query Frame = 2
Query: 41 AERGVEEAKAHPFPREVRFWTVKDVGYFLHSLGLGQYRRAFEEAAVDGEFLLALDASDCADVLGVSHALHSKKLFLAINKLRPLSADEMRKKVVVEREENADNTR-GNDRPDVQTVMSQVRNGRMKRVEESLEMGFSVDTKDEHGNTPLIVACQNVNLQMSEMLLRRGAKINHRNGGGNTALHYAMAYEPNGLLGEMLISNGADDSIENKDSLSCYDGLG 697
AE+ + +KA PFP E+R W+V DV +L +L LGQY+ AF EA+VDG+FLL L D VLG+ H LH +K+ L +KLRPLS + KK +V REE+A+ R G P V SQ RNGR+KR+ ESL +GF VD +DE GNT L+ A QN+NL+M EML+ R +NHRN GNTALH+AMAY+ G L E LI GADD+IEN +CYDGLG
Sbjct: 635 AEQEAKRSKAEPFPPEMRLWSVSDVARWLDTLSLGQYKDAFREASVDGDFLLELREEDLVQVLGMEHKLHVRKVILGRDKLRPLSETDHVKKALVLREEHAERERDGVAMPATDVVFSQCRNGRVKRLGESLNLGFPVDKEDEKGNTLLMCAAQNLNLKMCEMLINRNCDVNHRNSSGNTALHFAMAYDSEGTLAEYLIQQGADDTIENAVGCTCYDGLG 854
BLAST of mRNA_H-paniculata_contig8389.16396.1 vs. uniprot
Match: H3GH99_PHYRM (SAM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH99_PHYRM) HSP 1 Score: 226 bits (575), Expect = 5.820e-62 Identity = 124/231 (53.68%), Postives = 154/231 (66.67%), Query Frame = 2
Query: 23 VNERLEAERGVEEAKAHPFPREVRFWTVKDVGYFLHSLGLGQYRRAFEEAAVDGEFLLALDASDCADVLGVSHALHSKKLFLAINKLRPLSADEMRKKVVVEREENADNTRGNDRP-------DVQTVMSQVRNGRMKRVEESLEMGFSVDTKDEHGNTPLIVACQNVNLQMSEMLLRRGAKINHRNGGGNTALHYAMAYEPNGLLGEMLISNGADDSIENKDSLSCYDGL 694
V + E E + K P P E+R WTV DVG +L SL L QY+ AF E AVDGEFL+ L A D A+VLGVSH LH +KL A NKL PL+A E + V E NA RG + +V TV SQ RNGRMKR+ ESL+ GF VD++D+ GNT L++ACQNVN +M E+L+ R A +NHRN GNT LH+AMAY+ G+LGE LI++GADD+IEN L+ YDGL
Sbjct: 1938 VQRQREEEEALAPGKQQPLPEELRAWTVGDVGRWLDSLSLPQYKAAFSEGAVDGEFLIELRAEDMAEVLGVSHKLHVRKLLTARNKLLPLTAAERSQLDAVNHEANAARARGQEPAAGDEASLEVDTVFSQARNGRMKRLVESLDAGFPVDSEDDKGNTLLLLACQNVNQRMVELLVTRRANLNHRNAQGNTPLHFAMAYDGEGVLGEYLIAHGADDTIENNSGLTAYDGL 2168
BLAST of mRNA_H-paniculata_contig8389.16396.1 vs. uniprot
Match: A0A3R7IFD5_9STRA (SAM domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IFD5_9STRA) HSP 1 Score: 216 bits (551), Expect = 2.200e-61 Identity = 116/216 (53.70%), Postives = 149/216 (68.98%), Query Frame = 2
Query: 74 PFPREVRFWTVKDVGYFLHSLGLGQYRRAFEEAAVDGEFLLALDASDCADVLGVSHALHSKKLFLAINKLRPLSADEMRKKVVVEREENADNTRGNDRP---------DVQTVMSQVRNGRMKRVEESLEMGFSVDTKDEHGNTPLIVACQNVNLQMSEMLLRRGAKINHRNGGGNTALHYAMAYEPNGLLGEMLISNGADDSIENKDSLSCYDGL 694
P P +R WTV DVG +L SL L QY+ AF+E AVDGEFL+ L A D A+VLGVSH LH +KL +A NKL PL++ E + V E NA RG + +V+TV SQ RNGRMKR+ ESL+ GF +D++D+ NT L++ACQNVN +M E+L+ R A +NHRN GNT LH+AMAY+ G+LGE LI++GADD+IEN L+ YDGL
Sbjct: 359 PLPELLRSWTVDDVGRWLDSLSLPQYKAAFKEGAVDGEFLMELSAEDVAEVLGVSHKLHVRKLLIARNKLLPLTSAERTQLDAVNHEVNAARARGRGQEAAPGDDISLEVETVFSQARNGRMKRLVESLDAGFPIDSEDDKANTLLLLACQNVNQRMVELLVTRHANVNHRNAQGNTPLHFAMAYDGEGVLGEYLIAHGADDTIENNSGLTPYDGL 574 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8389.16396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8389.16396.1 >prot_H-paniculata_contig8389.16396.1 ID=prot_H-paniculata_contig8389.16396.1|Name=mRNA_H-paniculata_contig8389.16396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp MRKKVVVEREENADNTRGNDRPDVQTVMSQVRNGRMKRVEESLEMGFSVDback to top mRNA from alignment at H-paniculata_contig8389:4886..9383- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8389.16396.1 ID=mRNA_H-paniculata_contig8389.16396.1|Name=mRNA_H-paniculata_contig8389.16396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4498bp|location=Sequence derived from alignment at H-paniculata_contig8389:4886..9383- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8389:4886..9383- >mRNA_H-paniculata_contig8389.16396.1 ID=mRNA_H-paniculata_contig8389.16396.1|Name=mRNA_H-paniculata_contig8389.16396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=810bp|location=Sequence derived from alignment at H-paniculata_contig8389:4886..9383- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |