mRNA_H-paniculata_contig835.16367.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig835.16367.1
Unique NamemRNA_H-paniculata_contig835.16367.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig835.16367.1 vs. uniprot
Match: A0A6H5JND9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JND9_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 2.970e-120
Identity = 191/325 (58.77%), Postives = 242/325 (74.46%), Query Frame = 1
Query:  193 SFLRRFDLGNKAVEGIFDRSVVGAIVTIASVALMTVLFLSELMLFIKVDITSHMAVANFHEYDVVTVRLYVTFPHVDCTDLEILADNPRGDTGFLDAKSVEHRPPSKTEVRQFKARGRSTDSHTGCTLDGSLEIARAGGSIRVHVMHHDPARIIAVGGFLGMTKGETRMGPRGVAGANVTHKIHYFGFGPTVGLGRGRGFGANGQNPLSGTTFVSEAGAGQVRYSLKVVPISHASMYGNEIKSHTYSSNAAFLTEDEVMQTPTLSQQWLGVDFEYDFTPVMVQYTETRKSALEFFTSVCAIVGGIYTVSGLIVQGVRRLSKKKHD 1167
            S LRRFDLG KAV+G+ D+S+VGA+V+IASV LM VL +SEL+ +IKVD +SHMAVA+FHE+D VT RL+ TFP V+C DLE++ D+P+G     +A SV  RP SKTE   F+ +G       GCTLDG++ + RA G+I +HVMHHDP+R+I  G FL  TKGETR GP+ VAG N+THKIH FGFGP V     +G    G+N L+ +TFVSEAG+G V+YSLKVVPI H  M+G E+ +HTYSSN AF+ E +V+Q  + S   LGV+F YDFT VMV+YT+TR+S  E  TSVCAIVGGIYTVSGL V+G++ +S KKHD
Sbjct:    5 SRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVSVHKRPASKTERYPFQPQG----GGLGCTLDGTVTVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPV-----KGPVGVGRNSLARSTFVSEAGSGLVKYSLKVVPIFHRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD 320          
BLAST of mRNA_H-paniculata_contig835.16367.1 vs. uniprot
Match: A0A7S2UYF2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYF2_9STRA)

HSP 1 Score: 153 bits (387), Expect = 9.590e-39
Identity = 106/331 (32.02%), Postives = 178/331 (53.78%), Query Frame = 1
Query:  196 FLRRFDLGNKAVEGIFDRSVVGAIVTIASVALMTVLFLSELMLFIKVDITSHMAVANFHE-----YDVVTVRLYVTFPHVDCTDLEILADNPRGDTG------FLDAKSVEHRPPSKTEVRQFKARGRSTDSHTGCTLDGSLEIARAGGSIRVHVMHHDPARIIAVGGFLGMTKGETRMGPRGVAGANVTHKIHYFGFGPTVGLGRGRGFGANGQNPLSGTTFVSEAGAGQVRYSLKVVPISHASMYGNEIKSHTYSSNAAFLTEDEVMQTPTLSQ-QWLGVDFEYDFTPVMVQYTETRKSALEFFTSVCAIVGGIYTVSGLIVQGVRRLS 1152
             ++  D  +K +  I +++  GA+V+IAS+A+M +L +SE+ L+ KVD+ SHM V++  E     +D   V L++TFPH+ C DL++  +N +G            +K+++ R     EV  FK   R   + T CT++GSL++ R GGSI +      P  I ++   L +   +    P      NV+H IH   FG  + LG   G    G  PL       + G+G  RY +K+VP ++  ++ + +K H   S    + E+ V  +  +S    LG++  YDF+P+MV+Y E ++S  +F T++CAI+GG++T S L+V  + + S
Sbjct:    6 LMKSLDGFSKPMADIQEKTTAGAVVSIASLAIMALLLISEIWLYFKVDVVSHMGVSHLKEGMEQPFD---VHLHITFPHMRCEDLDLRVENLKGGDAADVMKMLSSSKTLDMRQSKPNEVVLFKDEARFKMNET-CTVEGSLKLPRVGGSIDI-ASRRKPVDIASLLSALFLNTAQLGNVP------NVSHVIHELWFGDKI-LG---GDQMAGSLPLKDACNAVDHGSGLFRYEVKIVPTTYEWLHTHRVKEHYQYS----VVENFVKDSAGISSLSTLGLEISYDFSPIMVEYVEQKQSIFQFLTNLCAIMGGVFTTSSLLVGLIHKSS 317          
BLAST of mRNA_H-paniculata_contig835.16367.1 vs. uniprot
Match: A0A6G0WYB9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYB9_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.180e-32
Identity = 97/327 (29.66%), Postives = 161/327 (49.24%), Query Frame = 1
Query:  193 SFLRRFDLGNKAVEGIFDRSVVGAIVTIASVALMTVLFLSELMLFIKVDITSHMAVANFHEYDVVTVRLYVTFPHVDCTDLEILADNPRGDTGFLDAKSVEHRPPSKTEVRQFKARGRSTDSHTGCTLDGSLEIARAGGSIRVHVMHHDPARIIAVGGFLGMTKGETRMGPRGVAGANVTHKIHYFGFGPTVGLGRGRGFGANGQNPLSGTTFVSEAGAGQVRYSLKVVPISHASMYGNEIKSHTYSSNAAFLTE--DEVMQTPTLSQQWLGVDFEYDFTPVMVQYTETRKSALEFFTSVCAIVGGIYTVSGLIVQGVRRLSKKKHD 1167
            S LR++D+  K VEGI +++ VGA++T+ SVA+  +LFLSEL ++   ++ + M V    +  ++ + + ++F H  C+D+ + A + +G+ G L   ++   P          A G       GC   GS+++ +  GS  V   H     + +   FL                 N +H +H   FGP +          N  NPL       E      +YSL VVP  +  +YG+ I+++ YS     +TE   E     TLS  + GV F Y+F+P+ V+Y ET+ S L+F TS CAI+GG++ V+ ++   +  +S +K D
Sbjct:    3 SRLRQYDVYTKGVEGIQEKTAVGAVITVLSVAVALLLFLSELNMYTTTEVVNRMYVDTMPQDTIMHIEVDISFLHEKCSDVSMDASDSKGNKGLLSDSNIASVP--------IGAEGE------GCRFTGSVDVHKIAGS--VSFAHEGSLNMFSFMDFLQF---------------NSSHIVHRLTFGPEI---------PNMVNPLENVHKTVEKNVALYKYSLSVVPTQYTPLYGSPIQTYQYS-----VTEYTSEPHDGGTLS--FPGVSFMYEFSPIKVEYIETKPSFLQFITSTCAILGGVFAVARILDSIIYSVSSRKLD 282          
BLAST of mRNA_H-paniculata_contig835.16367.1 vs. uniprot
Match: A0A7S2AXB8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXB8_9STRA)

HSP 1 Score: 135 bits (339), Expect = 3.410e-32
Identity = 100/321 (31.15%), Postives = 156/321 (48.60%), Query Frame = 1
Query:  196 FLRRFDLGNKAVEGIFDRSVVGAIVTIASVALMTVLFLSELMLFIKVDITSHMAVANFH-EYDVVTVRLYVTFPHVDCTDLEILADNPRGDTGFLDAKSVEHRPPSKTEVRQFKARGRSTDSHTGCTLDGSLEIARAGGSIRVHV---------MHHDPARIIAVGGFLGMTKGETRMGPRGVAGANVTHKIHYFGFGPTVGLGRGRGFGANGQNPLSGTTFVSEAGAGQVRYSLKVVPISHASMYGNEIKSHTYSSNAAFLTEDEVMQTPTLSQQWLGVDFEYDFTPVMVQYTETRKSALEFFTSVCAIVGGIYTVSGLI 1128
            +L++FD+  KA++G+  R++ GAI+T+AS  L+ +L  SEL++F  V    HM V +   +   V + L+ TFPH+ C    +  +  RGD       S+      KT V +            GC+L G L + + GG+  +           M    + +++  G +G  KG            N++H IH+  FGP      GR       NPL   T V     GQ ++ +KV+P  +  +  + + S+ YS +  F+  D +      S    G+ F YDF PVMV+Y E + S L+F T +C I+GGI+TVSGLI
Sbjct:    4 WLKKFDVHVKALDGVRKRTLPGAILTLASSTLIVLLCFSELLVFSSVKTVHHMTVDSAAADRPSVRISLHATFPHLACDSTNLEVEATRGDPTMDVVNSIV-----KTPVGEG-----------GCSLKGELLVGKVGGNFHISTGMAGLPSSPMLQLSSGLMSATGLMGSFKG-----------VNMSHTIHHLSFGPKF---PGR------SNPLEEVTNVVSTDVGQYQFHIKVIPTVYKYLRRSPVYSNQYSLSEQFVKLDLMSALKASSAP--GIFFYYDFYPVMVEYDEEKVSILQFLTRICGIIGGIFTVSGLI 286          
BLAST of mRNA_H-paniculata_contig835.16367.1 vs. uniprot
Match: A0A024UDA9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UDA9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 8.370e-27
Identity = 88/325 (27.08%), Postives = 149/325 (45.85%), Query Frame = 1
Query:  199 LRRFDLGNKAVEGIFDRSVVGAIVTIASVALMTVLFLSELMLFIKVDITSHMAVANFHEYDVVTVRLYVTFPHVDCTDLEILADNPRGDTGFLDAKSVEHRPPSKTEVRQFKARGRSTDSHTGCTLDGSLEIARAGGSIRVHVMHHDPARIIAVGGFLGMTKGETRMGPRGVAGANVTHKIHYFGFGPTVGLGRGRGFGANGQNPLSGTTFVSEAGAGQVRYSLKVVPISHASMYGNEIKSHTYSSNAAFLTEDE--VMQTPTLSQQWLGVDFEYDFTPVMVQYTETRKSALEFFTSVCAIVGGIYTVSGLIVQGVRRLSKKKHD 1167
            LR++D+  K VEGI +++  GA++T+ SVA++ +LFLSEL ++    + + M V    +  V+ + + +TF H  C D+ + A + +G+   L   ++   P    E               GC L G +++ +  G   V   H     + +   FL                 N +H +H   FGP +          N  NPL       E      +Y + +VP  +  +YG  I+++ YS        +E  VM  P       GV F Y+F+P+ V+Y E++ S L+F TS  AIVGG++ V+ ++   +  +S +K D
Sbjct:    5 LRQYDVYTKGVEGIQEKTTCGALITVISVAIVFLLFLSELGIYTTTQVVNRMHVDTVPQDAVMHIEVDITFLHEKCKDVAMDASDVKGNKDLLADSNITAVPVPSGESE-------------GCRLTGFVDVHKVAGV--VSFAHEGSLNMFSFMDFLEF---------------NASHIVHRLSFGPDI---------PNMVNPLQDVHKSVEKNVALYKYGVSIVPTQYTPLYGPPIQTYQYSVTEYTSEPNEGGVMSFP-------GVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSVIYSMSSRKLD 283          
BLAST of mRNA_H-paniculata_contig835.16367.1 vs. uniprot
Match: A0A1W0A9T6_9STRA (Endoplasmic reticulum-Golgi intermediate compartment protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9T6_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.030e-25
Identity = 88/323 (27.24%), Postives = 149/323 (46.13%), Query Frame = 1
Query:  199 LRRFDLGNKAVEGIFDRSVVGAIVTIASVALMTVLFLSELMLFIKVDITSHMAVANFHEYDVVTVRLYVTFPHVDCTDLEILADNPRGDTGFLDAKSVEHRPPSKTEVRQFKARGRSTDSHTGCTLDGSLEIARAGGSIRVHVMHHDPARIIAVGGFLGMTKGETRMGPRGVAGANVTHKIHYFGFGPTVGLGRGRGFGANGQNPLSGTTFVSEAGAGQVRYSLKVVPISHASMYGNEIKSHTYSSNAAFLTEDEVMQTPTLSQQWLGVDFEYDFTPVMVQYTETRKSALEFFTSVCAIVGGIYTVSGLIVQGVRRLSKKKHD 1167
            LR++D+  K VEGI +R+  GAI+T+ S+ ++ +LFLSEL ++   ++ + M V    +  V+ V + +TF H  C+D+ + A + +G+   +    V   P                D   GC   G +++ +  G I  +  H     +     FL                 N +H +H   FGP++          N  NPL     V        +Y + +VP  +  +YG+ ++++ YS     +TE            + GV F Y+F+P+ V+Y ET+ S L+F TS CAIVGG++ V+ ++   V  +S  K D
Sbjct:    5 LRQYDVYTKGVEGIQERTTGGAIITLTSLVVVLLLFLSELGIYTTTEVANRMYVDVDPQDTVMHVEVDITFLHEPCSDVAMDASDTKGNREVIVQSDVVAYPLE--------------DEKEGCRFKGFVDLKKIAGDI--NFAHEGSLNMFTFLEFLDF---------------NSSHIVHSLRFGPSI---------PNMVNPLENVHKVVIENFKLYKYRISIVPTQYTPLYGSPVQTYQYS-----VTEHASDPNENGRFSFPGVAFSYEFSPIKVEYIETKPSFLQFLTSTCAIVGGVFAVARILDGFVYSVSAHKVD 282          
BLAST of mRNA_H-paniculata_contig835.16367.1 vs. uniprot
Match: W4G1C2_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1C2_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.120e-25
Identity = 88/341 (25.81%), Postives = 155/341 (45.45%), Query Frame = 1
Query:  199 LRRFDLGNKAVEGIFDRSVVGAIVTIASVALMTVLFLSELMLFIKVDITSHMAVANFHEYDVVTVRLYVTFPHVDCTDLEILADNPRGDTGFLDAKSVEHRPPSKTEVRQFKARGRSTDSHTGCTLDGSLEIARAGGSIRVHVMHHDPARIIAVGGFLGMTKGETRMGPRGVAGANVTHKIHYFGFGPTVGLGRGRGFGANGQNPLSGTTFVSEAGAGQV------------------RYSLKVVPISHASMYGNEIKSHTYSSNAAFLTEDEVMQTPTLSQQWLGVDFEYDFTPVMVQYTETRKSALEFFTSVCAIVGGIYTVSGLIVQGVRRLSKKKHD 1167
            LR++D+  K V+GI ++++ GAI+T+ SVA++ +LFLSEL L+   ++ + M V    +  V+ + + +TF H  C D+ + A + +G+   L   ++   P               +D   GC L G++++ +  G   V   H     + +   FL                 N +H +H   FGP +          N  NPL       E     +                  +Y L +VP  H  +YG  ++++ YS     +TE     +   +  + GV F Y+F+P+ V+Y E++ S L+F TS  AIVGG++ V+ ++   +  +S +K D
Sbjct:    5 LRQYDVYTKGVDGIQEKTMGGAIITVISVAIVILLFLSELGLYTTTEVVNRMHVDTVPQDAVMRIEVDITFLHEKCADVAMDASDIKGNKDLLSDSNIAAVPVV-------------SDESEGCRLTGTVDVHKVAGV--VSFAHAGSLNMFSFSDFLEF---------------NSSHVVHRLSFGPEI---------PNMVNPLENVHKTVEKNGRYLPSYLSFIIRHLVIVVALYKYGLSIVPTQHTPLYGPPVQTYQYS-----VTEYTSEPSEEGALSFPGVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSLIYSVSSRKMD 301          
BLAST of mRNA_H-paniculata_contig835.16367.1 vs. uniprot
Match: M4BZN4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BZN4_HYAAE)

HSP 1 Score: 114 bits (286), Expect = 4.610e-25
Identity = 89/320 (27.81%), Postives = 145/320 (45.31%), Query Frame = 1
Query:  202 RRFDLGNKAVEGIFDRSVVGAIVTIASVALMTVLFLSELMLFIKVDITSHMAVANFHEYDVVTVRLYVTFPHVDCTDLEILADNPRGDTGFLDAKSVEHRPPSKTEVRQFKARGRSTDSHTGCTLDGSLEIARAGGSIRVHVMHHDPARIIAVGGFLGMTKGETRMGPRGVAGANVTHKIHYFGFGPTVGLGRGRGFGANGQNPLSGTTFVSEAGAGQVRYSLKVVPISHASMYGNEIKSHTYSSNAAFLTEDE-VMQTPTLSQQWLGVDFEYDFTPVMVQYTETRKSALEFFTSVCAIVGGIYTVSGLIVQGVRRLSKK 1158
            RRFDL  K VEGI +R++ G IVT+ S  +   L LSEL ++  V +T HM V    +   +TV + ++F H  C  + +   + +G+   L  + ++  P  +                 GC   G++++ +  G +     H     I +V  FL                 N +H I++  FGP +          + + PL   + V        +Y + +VP  +  + G  + +  YS     +TE E V + P     + GV F YDF+P+ VQY E++ S L F TS  AIVGG++ V+ +I   +  +SKK
Sbjct:    4 RRFDLNVKGVEGIQERTIGGGIVTLLSCVVAAFLLLSELSVWWTVSVTHHMHVDTDPQDFPITVEVDISFLHETCQAVALDVSDAKGNKDILLNRDIQEEPFGEN----------------GCRFYGTVQVQKVAGDLSF--AHEGSLTIFSVFEFLSF---------------NSSHVINHLRFGPQI---------PDMETPLIDVSKVLTTNLATYKYFVSIVPTRYIFLNGRSVATFQYS-----VTEHESVTRGPNGQVSFPGVIFSYDFSPIAVQYVESKPSVLHFLTSTSAIVGGVFAVARMIDGAIYSVSKK 276          
BLAST of mRNA_H-paniculata_contig835.16367.1 vs. uniprot
Match: A0A067CWK1_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CWK1_SAPPC)

HSP 1 Score: 110 bits (276), Expect = 1.160e-23
Identity = 87/323 (26.93%), Postives = 147/323 (45.51%), Query Frame = 1
Query:  199 LRRFDLGNKAVEGIFDRSVVGAIVTIASVALMTVLFLSELMLFIKVDITSHMAVANFHEYDVVTVRLYVTFPHVDCTDLEILADNPRGDTGFLDAKSVEHRPPSKTEVRQFKARGRSTDSHTGCTLDGSLEIARAGGSIRVHVMHHDPARIIAVGGFLGMTKGETRMGPRGVAGANVTHKIHYFGFGPTVGLGRGRGFGANGQNPLSGTTFVSEAGAGQVRYSLKVVPISHASMYGNEIKSHTYSSNAAFLTEDEVMQTPTLSQQWLGVDFEYDFTPVMVQYTETRKSALEFFTSVCAIVGGIYTVSGLIVQGVRRLSKKKHD 1167
            LR++D+  K VEGI  R+  GAI+T+ S+ ++ +LFLSEL ++   ++ + M V    +  ++ V + +TF H   TD+ + A + +G+   +    V   P   +E               GC   G +++ +  G I  +  H     +     FL                 N +H +H   FGP++             NPL     V        +Y L +VP  +  +YG  I+++ YS     +TE            + GV F Y+F+P+ V+Y ET+ S L+F TS CAIVGG++ V+ ++   V  ++ +K D
Sbjct:    5 LRQYDVYTKGVEGIQMRTTSGAIITLVSLVVVLLLFLSELGIYTTTEVVNRMYVDIDPQDTIMHVEVDITFLHEPETDVAMDASDTKGNREVIVKSDVIAYPLENSEE--------------GCRFTGYVDVQKTAGDI--NFAHEGSLNMFTFLEFLDF---------------NSSHIVHSLRFGPSI---------PEMTNPLQDVHKVVVENFKIYKYGLSIVPTQYTPLYGPSIQTYQYS-----VTEHASDPNENGRFSFPGVVFSYEFSPIKVEYIETKPSFLQFLTSTCAIVGGVFAVARILDGLVHSVASRKLD 282          
BLAST of mRNA_H-paniculata_contig835.16367.1 vs. uniprot
Match: A0A7S4A3Y7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3Y7_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.010e-23
Identity = 97/314 (30.89%), Postives = 147/314 (46.82%), Query Frame = 1
Query:  223 KAVEGIFDRSVVGAIVTIASVALMTVLFLSELMLFIKVDITSHMAVAN---------FHEYDVVTVRLYVTFPHVDCTDLEILADNPRGDTGFLDAKSVEHRPPSKTEVRQFKARGRSTDSHTGCTLDGSLEIARAGGSIRVHVMHHD-PAR--IIAVGGFLGMTKGETRMGPRGVAGANVTHKIHYFGFGPTVGLGRGRGFGANGQNPLSGTTFVSEAGAGQVRYSLKVVPISHASMYGNEIKSHTYSSNAAFLTEDEVMQTPTLSQQWLGVDFEYDFTPVMVQYTETRKSALEFFTSVCAIVGGIYTVSGLI 1128
            +AVEG+ +R+V GA++T   V L+  L   EL  +   +   H+ V +         FH  D + + L  TF HV C DLE+  +  RG    +D   +  R P   E+  +        +  GCTLDG L + +      V +     PA+  +I V  FL   +  T  GP      N+THK+H F FG    + +          PL G   VS    GQ RY+LKV+P      +  ++ ++ YS   ++++  ++    T      G+ F YDF PVMVQ  + R S LEF  S+CA+VGG   ++ L+
Sbjct:    8 RAVEGVQERTVSGALITGGCVLLILSLLTGELSSYFYPNSIHHLGVDDGDASIGSRPFHVPDRLPIELSATFAHVKCDDLELSIEAARGLRDAVDR--INFREPHAKELYGWS----DASTSEGCTLDGKLRVGKVSAHFSVGLTAAAAPAKPNVIMVQSFL---RQATNAGPS----KNMTHKVHVFRFGSRSSVTKNA--------PLDG--LVSPDLDGQARYALKVIPTVLDDGWFPQV-ANQYSLAESYVSAKQLQTDSTAVP---GIVFFYDFFPVMVQVKKERTSILEFLVSLCAVVGGCVALASLL 294          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig835.16367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JND9_9PHAE2.970e-12058.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UYF2_9STRA9.590e-3932.02Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6G0WYB9_9STRA2.180e-3229.66Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S2AXB8_9STRA3.410e-3231.15Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A024UDA9_9STRA8.370e-2727.08Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1W0A9T6_9STRA1.030e-2527.24Endoplasmic reticulum-Golgi intermediate compartme... [more]
W4G1C2_9STRA1.120e-2525.81Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
M4BZN4_HYAAE4.610e-2527.81Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A067CWK1_SAPPC1.160e-2326.93Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A7S4A3Y7_9STRA2.010e-2330.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig835contigH-paniculata_contig835:1997..6125 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score361.7
Seed ortholog evalue3.7e-97
Seed eggNOG ortholog2880.D7G740
KEGG koko:K20365,ko:K20367
Hectar predicted targeting categorysignal anchor
GOsGO:0008150,GO:0009825,GO:0009987,GO:0016049,GO:0040007
EggNOG free text desc.vesicle-mediated transport
EggNOG OGsCOG0445@1,KOG2667@2759
Ec32 ortholog descriptionEndoplasmic reticulum vesicle transporter, C-terminal
Ec32 orthologEc-01_011140.1
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons3
Model size1545
Cds size993
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig835.16367.1prot_H-paniculata_contig835.16367.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig835 2372..5948 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931049.6324823-UTR-H-paniculata_contig835:1996..23711622931049.6324823-UTR-H-paniculata_contig835:1996..2371Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig835 1997..2371 -
1691481566.6865568-UTR-H-paniculata_contig835:1996..23711691481566.6865568-UTR-H-paniculata_contig835:1996..2371Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig835 1997..2371 -
1622931049.719998-UTR-H-paniculata_contig835:5948..61251622931049.719998-UTR-H-paniculata_contig835:5948..6125Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig835 5949..6125 -
1691481566.7386615-UTR-H-paniculata_contig835:5948..61251691481566.7386615-UTR-H-paniculata_contig835:5948..6125Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig835 5949..6125 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931049.6654665-CDS-H-paniculata_contig835:2371..31111622931049.6654665-CDS-H-paniculata_contig835:2371..3111Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig835 2372..3111 -
1691481566.7020395-CDS-H-paniculata_contig835:2371..31111691481566.7020395-CDS-H-paniculata_contig835:2371..3111Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig835 2372..3111 -
1622931049.6854026-CDS-H-paniculata_contig835:3346..35081622931049.6854026-CDS-H-paniculata_contig835:3346..3508Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig835 3347..3508 -
1691481566.7136753-CDS-H-paniculata_contig835:3346..35081691481566.7136753-CDS-H-paniculata_contig835:3346..3508Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig835 3347..3508 -
1622931049.7019582-CDS-H-paniculata_contig835:5857..59481622931049.7019582-CDS-H-paniculata_contig835:5857..5948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig835 5858..5948 -
1691481566.7263246-CDS-H-paniculata_contig835:5857..59481691481566.7263246-CDS-H-paniculata_contig835:5857..5948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig835 5858..5948 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig835.16367.1

>prot_H-paniculata_contig835.16367.1 ID=prot_H-paniculata_contig835.16367.1|Name=mRNA_H-paniculata_contig835.16367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=331bp
MSSRGSFLRRFDLGNKAVEGIFDRSVVGAIVTIASVALMTVLFLSELMLF
IKVDITSHMAVANFHEYDVVTVRLYVTFPHVDCTDLEILADNPRGDTGFL
DAKSVEHRPPSKTEVRQFKARGRSTDSHTGCTLDGSLEIARAGGSIRVHV
MHHDPARIIAVGGFLGMTKGETRMGPRGVAGANVTHKIHYFGFGPTVGLG
RGRGFGANGQNPLSGTTFVSEAGAGQVRYSLKVVPISHASMYGNEIKSHT
YSSNAAFLTEDEVMQTPTLSQQWLGVDFEYDFTPVMVQYTETRKSALEFF
TSVCAIVGGIYTVSGLIVQGVRRLSKKKHD*
back to top

mRNA from alignment at H-paniculata_contig835:1997..6125-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig835.16367.1 ID=mRNA_H-paniculata_contig835.16367.1|Name=mRNA_H-paniculata_contig835.16367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4129bp|location=Sequence derived from alignment at H-paniculata_contig835:1997..6125- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTTTCCTTGGTTTTGATGCCTGCGAGGCGCTGCCTTGTGCGGCCATTAT TACACTACATGCAGGCGTGTGTACACTTTTGTGTGCGTATATGCTATAGT CATATTTTCTGTGCTCTCTTGGGGATTAGCTGTGGTAGAGTCGCAAAGGT GTTGAACAAGTGCCCAAGAAACCGACCATGTCGTCCAGAGGCAGCTTTCT CCGAAGATTTGACCTGGGGAACAAGGCTGTGGAGGGAATCTTCGACAGAT CCGTGGTGGGAGCTATTGGTGAGGCGGATTATGTGGCAGACACCCACTGT TAATATCTACGCGGAAAATACCATGTTGGCGGTCAGGACTTGAAAAAAAA CAACGACAGTCGTTACCAGCATAGTACATTACAGACAGATGATTGTCAAC CAACGTATGTAACCTTTGCGCTTCTCTGAACTTGTTCTCGAGACTCCGCC CACAAAGTGCCCTCTTATTACGGTGTCATCAATATCATGTGTGCATCTAA AGGTAATAGTGGCTACTGATTGTACTACCTAGCATGCTCGTTGCATAAAA TGTCGAGCGTACGTGGAGCAGGGTGGGACAGCTACCTTCATTCCAAACTC CAAATAAAACGAGCATGCATTCCTTCCTGACCTTCGAATGTACCTCTCTG CTCCCTGCACACGATGGGTGGAATCCATAATTCACTGGACTAATAAATAC AAGTACAAGCAAGCATACTACACTTCTAGAAACTAGGCATCATGGCGTTG AAGGTCATTTTTTAGGGAATACACGACACTTTGCGGCCCGAATTGATGTT TCAGGAGCTTTTCCCCCTGACAAACAGCAGGTCAGGGATGCGGGCAAATT AAACGTATGAAGCGGAAAGATTTATGTCGAAATTCGAATGGGGGGTGAAA AGAAGCGAAGCTAGTTCGACGCTTGAGCGCCGGAGGCTGCTTGGAACCAA AAAAGTATCTGATGATGAAAATTACGGTAGGCTGATCCATGCCAACTACC CTTTTGTTCTATATGTACTATCCATGCTGGATTATCTATCTGAACAGCAG CGGCTCGGTATCCACGGTGTCTTTTCCACCTTTTTGAGGTAGGGATTAGG GGGAAAAGGACGCTTCAAGCGTTATTTATTTGGCAGAAATACATAATCTG TTATTTGAGACTTCAAAGTTGTTCAGCGAAACGGGGCTGTATCGGGTGTA CCCGCCAAAAGATAGTAAAAATTTTGCTAGATCATGATTACCTTGACCGC GTTGCGCTCGGTCCAATTGACATTTGCGTGCCATGGAAGTGTTGAAATGT GTTTGACATTAACCGTGTTGAGCGGACAGGTCTGCACGTACACGGCTCTG CGCGGCTACCTCGAGGGGTTGGTGTGGTGTCGAATGAACAGTAATCCTTG ATGCACCCACACCAGCGTGATTCAGTGCAATGGTAACCTGAAACCTTAGC GCTATCGTAGCATAAAGGCAAGCATATCTGAACAGCACTTGCTCGGGTAT GTTAACGTCCAACCCATCTATAGGCAGAAACTTGTGCGCCATGGCTGACG GGGGAAACTCGTGCTTGTACTGTAGAACAGGCCTAGGTCGTTCATGGGAT TGCATGTTCTGGTTTGAGTGAGCGCGATGGATCAAGTAAAATCTAGAGCC GCATGTATTTCAACGTTTTGTAGTATTGTAATGCAAGCAGATTCGTTGCA AGTTTCAGCATTTTGTGATACGGGACACTAATGGGAAATTGGGTATATTT GCACATATGTCGTGCTCTTGACCCTTGGTCCCGTGAACCCCCATTTCCCG TCAACTAGAGTTAGGATTACGGACAAAAATGTGCGCACTCTCCTTGTTCG TAAAGCATTAGAAGGCCGGTCTGACAGACACGCTGCCTTAGAGATTCGTC GAGGTGGCGGCTCAAGAAAAACGGTGACTAACACAAACCCTGCATCCACG TGACACTGCAACTGTCCAAAGCTGCACCCACTGCTCAAAAATAGAGTACA AAATCCTATCAGAGTGTGCATGGTTCATTTCTCCACGACATACCCTTGCA AGCTACAATCGTGGATTTTCGTCAACTCTGTGTCCTATGGCGAGGCTCTG AAGGCTCGAAGATTTGTACCTATACGTGCATCGGTGGAATCACGGCAACT TGGTCCAGGCGATAGAGCATAAGTTAAGGTGTCGGGTCGCCTCGTTGATT AGGCATGTTGTGTCTTTCAGCCTGCAATCAGTTAATGTTTGTTTTGTCCA AATAACTCCTGCTGTAAGCTGCTGTTGGTGCTGGGTGACCGTCTGATCTT GACGTGGCGACAAAATGAGCCCCCATTTGTATGTGCCGTTAATACTATAT TTCCTGCTTGTACAATTTTTGGCGGCAGCAGTACGATACATAGCCTGCGT CACTTGATGCGTGGCATGTACTAACAGACTTCCGACACTTTTCGAATGAA CTAAGCACATGACATCAGCATGGGCTGTTGTGGCATACCGCCTTATCGCG TTACCCTCGCCCAAATTCAACGCTGCTAAACGACACAAAGGCACGCCGTC GTCTACTAGCGCGATATTGATCCGACCGAAATTGCTCCCCCTTCTTGCAT GTCTACTTACCGTCCAGTGACAATTGCGTCTGTGGCGCTTATGACGGTGC TGTTTCTGTCGGAGCTCATGCTTTTTATCAAGGTGGACATCACGTCACAC ATGGCGGTCGCTAACTTTCACGAGTACGATGTCGTCACCGTGAGACTATA CGTCACATTTCCGCATGTCGACTGTACAGGTGAGAGTGCTGAGATCACTT TTAGAGATGTAAGTACACTGTGCCACAGCTTGAGCATCTTGGCCTGGATA TGGTGCTAAGTTTCGTCATCAGCAAGTCGTGCACCATTAGTTAATTAATA GCGAAAATTTCAAGGTACACCAGGTATTGTTCATCTCTCATGTGTTGTGC CTATACTGTGATCATGCTCCGGCCGCCGCTCCGCTGTTGGTCGTTTTCCG GTACACGCACACAGACCTAGAGATCCTCGCTGATAACCCTAGAGGAGACA CGGGATTTTTGGATGCAAAGAGCGTTGAGCATCGACCACCGTCCAAGACC GAAGTCCGGCAATTCAAAGCTCGGGGAAGGAGCACAGATTCACACACGGG GTGCACCTTAGATGGCTCCCTCGAAATAGCAAGGGCTGGAGGGTCTATTC GCGTGCACGTGATGCACCACGACCCAGCCAGGATCATCGCGGTGGGAGGG TTTCTGGGAATGACCAAAGGAGAGACGCGCATGGGGCCAAGAGGCGTCGC AGGGGCAAACGTTACACACAAAATTCATTATTTTGGATTTGGGCCCACAG TGGGACTAGGAAGGGGAAGAGGATTCGGTGCGAATGGTCAGAACCCTCTG TCGGGGACGACGTTTGTTTCTGAAGCTGGGGCGGGGCAAGTTAGATATTC ATTGAAAGTTGTTCCGATTTCACATGCGTCGATGTATGGGAACGAGATAA AAAGTCACACTTACTCGTCAAACGCAGCATTTCTGACCGAAGACGAGGTG ATGCAAACTCCAACCCTATCGCAGCAGTGGCTAGGGGTGGACTTTGAGTA CGATTTCACGCCCGTTATGGTGCAATACACGGAAACCCGGAAATCCGCAT TAGAGTTTTTCACTAGTGTTTGCGCCATTGTTGGGGGAATTTATACGGTG AGCGGGCTAATAGTTCAGGGCGTGAGAAGGTTATCGAAAAAGAAGCATGA CTAATTACACAGGGATATGGATTGTACGTGACCACATGAGACACTTTTGG CTCAACAGAGTCGTGCGATGGTAGGTCAACGTGAAGCTGTGGGGATATTT CGGTAATATGCGCGCACAGGGAGAGACAAATGGATTCCGTCAAAACATAC TGCGGTACACGAGGGAGACCCACGACAAGTACATGCTTCCCCCAAGCTTC AAGCTCACTTAGTTTGTAGCACCATGGGCAGCTCGAATCAAACAACGTCC GTAAGACTTGAGTGTTATCATCCATGGGCAAGCTTGTTCCAGTGGTCCAA TGGGTAATGAATCTATGGGGCATTCACCATATGCTGCATTCTGTGATTGC CAAGAGATCGCGTTCCTGTAAGACCTGCA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig835:1997..6125-

>mRNA_H-paniculata_contig835.16367.1 ID=mRNA_H-paniculata_contig835.16367.1|Name=mRNA_H-paniculata_contig835.16367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1986bp|location=Sequence derived from alignment at H-paniculata_contig835:1997..6125- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGTCCAGAGGCAGCTTTCTCCGAAGATTTGACCTGGGGAACAAGGC
TGTGGAGGGAATCTTCGACAGATCCGTGGTGGGAGCTATTGATGTCGTCC
AGAGGCAGCTTTCTCCGAAGATTTGACCTGGGGAACAAGGCTGTGGAGGG
AATCTTCGACAGATCCGTGGTGGGAGCTATTGTGACAATTGCGTCTGTGG
CGCTTATGACGGTGCTGTTTCTGTCGGAGCTCATGCTTTTTATCAAGGTG
GACATCACGTCACACATGGCGGTCGCTAACTTTCACGAGTACGATGTCGT
CACCGTGAGACTATACGTCACATTTCCGCATGTCGACTGTACAGTGACAA
TTGCGTCTGTGGCGCTTATGACGGTGCTGTTTCTGTCGGAGCTCATGCTT
TTTATCAAGGTGGACATCACGTCACACATGGCGGTCGCTAACTTTCACGA
GTACGATGTCGTCACCGTGAGACTATACGTCACATTTCCGCATGTCGACT
GTACAGACCTAGAGATCCTCGCTGATAACCCTAGAGGAGACACGGGATTT
TTGGATGCAAAGAGCGTTGAGCATCGACCACCGTCCAAGACCGAAGTCCG
GCAATTCAAAGCTCGGGGAAGGAGCACAGATTCACACACGGGGTGCACCT
TAGATGGCTCCCTCGAAATAGCAAGGGCTGGAGGGTCTATTCGCGTGCAC
GTGATGCACCACGACCCAGCCAGGATCATCGCGGTGGGAGGGTTTCTGGG
AATGACCAAAGGAGAGACGCGCATGGGGCCAAGAGGCGTCGCAGGGGCAA
ACGTTACACACAAAATTCATTATTTTGGATTTGGGCCCACAGTGGGACTA
GGAAGGGGAAGAGGATTCGGTGCGAATGGTCAGAACCCTCTGTCGGGGAC
GACGTTTGTTTCTGAAGCTGGGGCGGGGCAAGTTAGATATTCATTGAAAG
TTGTTCCGATTTCACATGCGTCGATGTATGGGAACGAGATAAAAAGTCAC
ACTTACTCGTCAAACGCAGCATTTCTGACCGAAGACGAGGTGATGCAAAC
TCCAACCCTATCGCAGCAGTGGCTAGGGGTGGACTTTGAGTACGATTTCA
CGCCCGTTATGGTGCAATACACGGAAACCCGGAAATCCGCATTAGAGTTT
TTCACTAGTGTTTGCGCCATTGTTGGGGGAATTTATACGGTGAGCGGGCT
AATAGTTCAGGGCGTGAGAAGGTTATCGAAAAAGAAGCATGACTAAACCT
AGAGATCCTCGCTGATAACCCTAGAGGAGACACGGGATTTTTGGATGCAA
AGAGCGTTGAGCATCGACCACCGTCCAAGACCGAAGTCCGGCAATTCAAA
GCTCGGGGAAGGAGCACAGATTCACACACGGGGTGCACCTTAGATGGCTC
CCTCGAAATAGCAAGGGCTGGAGGGTCTATTCGCGTGCACGTGATGCACC
ACGACCCAGCCAGGATCATCGCGGTGGGAGGGTTTCTGGGAATGACCAAA
GGAGAGACGCGCATGGGGCCAAGAGGCGTCGCAGGGGCAAACGTTACACA
CAAAATTCATTATTTTGGATTTGGGCCCACAGTGGGACTAGGAAGGGGAA
GAGGATTCGGTGCGAATGGTCAGAACCCTCTGTCGGGGACGACGTTTGTT
TCTGAAGCTGGGGCGGGGCAAGTTAGATATTCATTGAAAGTTGTTCCGAT
TTCACATGCGTCGATGTATGGGAACGAGATAAAAAGTCACACTTACTCGT
CAAACGCAGCATTTCTGACCGAAGACGAGGTGATGCAAACTCCAACCCTA
TCGCAGCAGTGGCTAGGGGTGGACTTTGAGTACGATTTCACGCCCGTTAT
GGTGCAATACACGGAAACCCGGAAATCCGCATTAGAGTTTTTCACTAGTG
TTTGCGCCATTGTTGGGGGAATTTATACGGTGAGCGGGCTAATAGTTCAG
GGCGTGAGAAGGTTATCGAAAAAGAAGCATGACTAA
back to top