mRNA_H-paniculata_contig8334.16350.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8334.16350.1
Unique NamemRNA_H-paniculata_contig8334.16350.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig8334.16350.1 vs. uniprot
Match: A0A6H5KEK1_9PHAE (Tudor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK1_9PHAE)

HSP 1 Score: 526 bits (1355), Expect = 2.890e-179
Identity = 263/301 (87.38%), Postives = 278/301 (92.36%), Query Frame = 1
Query:  331 MSRSALERQATRAARSGTLPTPTSAPAGFLSEVDE-LTEEQQREIEEANNVLTIHGNDRTFNLNTLLAQTILASEYFKGLAELTNHLEVLDEIYSHCDHVAPWAPGTSRVPSSAFCLLMKLFTLKLTRPQMNEILMHEDSPFIRAIGFLYLRYTCPPKELWGWLEPYVDDEEEFRPSPTEGSMTMGAWVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVHHLVPGTKVRAIYEDEDNDPSWYDAVIKSVEEDNYFWVTFPEYGNEELVRLGSIMLQTKTDKSPPR 1230
            MSRSALERQA R+ARSGTLP PTSAPAGFLSEVD+ LTEEQ++E E  NNVL IHGNDRTFNLNTLLAQTILASEYFK L  +T +LEV+DEIY +CDHVAPWAPGTSRVPSSAFCLLMKLF +KLTRPQMNEIL+HEDSPFIRAIGFLYLRYTCPPKELWGWLEPY+DDEEEF+PSPTEGSMTMG WVRKIISDM YYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIV+ L PGTKVRAIY DEDNDPSWYDAVI SVEEDN + VTFPEYGN+ELVRLGSIMLQ KTDKSP R
Sbjct:    1 MSRSALERQAFRSARSGTLPMPTSAPAGFLSEVDDQLTEEQRQEEELHNNVLPIHGNDRTFNLNTLLAQTILASEYFKSLVSITTYLEVVDEIYRYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHEDSPFIRAIGFLYLRYTCPPKELWGWLEPYMDDEEEFKPSPTEGSMTMGKWVRKIISDMHYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEDNDPSWYDAVINSVEEDNRYLVTFPEYGNQELVRLGSIMLQAKTDKSPTR 301          
BLAST of mRNA_H-paniculata_contig8334.16350.1 vs. uniprot
Match: D7FPC2_ECTSI (Tudor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC2_ECTSI)

HSP 1 Score: 453 bits (1165), Expect = 5.030e-150
Identity = 243/333 (72.97%), Postives = 261/333 (78.38%), Query Frame = 1
Query:  331 MSRSALERQATRAARSGTLPTPTSAPAGFLSEVDE-LTEEQQREIEEANNVLTIHGNDRTFNLNTLLAQTILASEYFKGLAELTNHLE--------------------------------VLDEIYSHCDHVAPWAPGTSRVPSSAFCLLMKLFTLKLTRPQMNEILMHEDSPFIRAIGFLYLRYTCPPKELWGWLEPYVDDEEEFRPSPTEGSMTMGAWVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVHHLVPGTKVRAIYEDEDNDPSWYDAVIKSVEEDNYFWVTFPEYGNEELVRLGSIMLQTKTDKSPPR 1230
            MSRSALERQA R+ARSGTLP PTSAPAGFLSEVD+ LTEEQ++E E  NNVL IHGNDRTFNLNTLLAQTILASEYFK LA +T +LE                                V+DEIYS+CDHVAPWAPGTSRVPSSAFCLLMKLF +KLTRPQMNEIL+HE                    ELWGWLEPY+DDE++F+PSPTEGSMTMG WVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIV+ L PGTKVRAIY DE+NDPSWYDAVI SVEEDN + VTFPEYGN+ELVRLGSIMLQ KTDKSP R
Sbjct:    1 MSRSALERQAFRSARSGTLPVPTSAPAGFLSEVDDQLTEEQRQEEELHNNVLPIHGNDRTFNLNTLLAQTILASEYFKSLAGITTYLEGVKIVGLAAGDCHTMTYDVSGKAYGWGSYREKVVDEIYSYCDHVAPWAPGTSRVPSSAFCLLMKLFVIKLTRPQMNEILVHE--------------------ELWGWLEPYMDDEKKFKPSPTEGSMTMGKWVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVNLLKPGTKVRAIYADEENDPSWYDAVINSVEEDNRYLVTFPEYGNQELVRLGSIMLQAKTDKSPTR 313          
BLAST of mRNA_H-paniculata_contig8334.16350.1 vs. uniprot
Match: K3WW49_GLOUD (Pre-mRNA-splicing factor 38 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW49_GLOUD)

HSP 1 Score: 293 bits (749), Expect = 3.890e-90
Identity = 140/244 (57.38%), Postives = 176/244 (72.13%), Query Frame = 1
Query:  481 LTIHGNDRTFNLNTLLAQTILASEYFKGLAELTNHLEVLDEIYSHCDHVAPWAPGTSRVPSSAFCLLMKLFTLKLTRPQMNEILMHEDSPFIRAIGFLYLRYTCPPKELWGWLEPYVDDEEEFRPSPTEG-SMTMGAWVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVHHLVPGTKVRAIYEDEDNDPSWYDAVIKSVEEDNYFWVTFPEYGNEELVRLGSIMLQTK 1209
            L I+GN  T+NLNTLL Q IL S YF  L  L  + EV+DEIY   DH  P +PGT+R+PS+ FCLL K F ++LT  QM  +L H DSP+IRA+GFLYLRYTC P++LWGW EPY+DD+EEF  +       T+G W+  ++ D+ Y+GT+LPRIP  IE  +KV+LLLH   K+RE+AN  IV  L PGTK+RA+Y DEDN+P+ YDAVI SVEE+N FWVTFPEYGN E V+LG I  + K
Sbjct:   39 LPIYGNQTTYNLNTLLHQNILQSAYFHELYNLKTYHEVVDEIYYRVDHAEPLSPGTARIPSTCFCLLHKFFLMRLTMKQMQGLLKHTDSPYIRAVGFLYLRYTCDPEKLWGWYEPYLDDKEEFNAAANPNVKTTIGEWLVGLLEDINYFGTILPRIPKKIEDSIKVKLLLHGRKKEREQANLSIVEFLKPGTKIRAMYADEDNEPAMYDAVIDSVEENNEFWVTFPEYGNTEKVKLGDIEFERK 282          
BLAST of mRNA_H-paniculata_contig8334.16350.1 vs. uniprot
Match: A0A0P1ARE8_PLAHL (Pre-mRNA-splicing factor 38 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARE8_PLAHL)

HSP 1 Score: 290 bits (741), Expect = 4.420e-89
Identity = 151/304 (49.67%), Postives = 198/304 (65.13%), Query Frame = 1
Query:  331 MSRSALERQATRAARSGTLPTPTSAPAGFLSEVDELTEEQQREIEEANNVLTIHGNDRTFNLNTLLAQTILASEYFKGLAELTNHLEVLDEIYSHCDHVAPWAPGTSRVPSSAFCLLMKLFTLKLTRPQMNEILMHEDSPFIRAIGFLYLRYTCPPKELWGWLEPYVDDEEEFRPSPTEG-SMTMGAWVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVHHLVPGTKVRAIYEDEDNDPSWYDAVIKSVEEDNYFWVTFPEYGNEELVRLGSIMLQT---KTDKSPPR 1230
            MSRSAL R A + +                +E DE  E+ +R +++  + L+IHGND T+NLNTLL Q IL S YF  L +   + EV+DEIY   DH  PW+PGT+R+PSS FCLL K   ++LTR QM  +L H+DSP+IR +GFLYLR+TC P ELW W EPY++D EEF  S       T+G W+ +++ +  Y+GT+LPRIP  IE  +KV+LLL    KKR K N  I+ HL PGTKVR++Y DE+N+P+ YDAVI+SVEE N FWV+FP YGN E V LG I   +     ++SP R
Sbjct:    1 MSRSALTRHALQKS------------LRVQNEPDEPPEQTERHVKQ--DELSIHGNDTTYNLNTLLHQNILQSAYFHELYKFKTYHEVVDEIYYRVDHAEPWSPGTARIPSSCFCLLHKFCLMRLTRKQMQGLLRHKDSPYIRVVGFLYLRFTCDPDELWTWFEPYLEDSEEFNASANPSIKTTIGEWLIRLLEENNYFGTILPRIPKKIEDGIKVKLLLLSRKKKRAKENLAIISHLKPGTKVRSMYADEENEPAMYDAVIESVEEGNQFWVSFPAYGNTEKVSLGDIEFTSGKQHRERSPAR 290          
BLAST of mRNA_H-paniculata_contig8334.16350.1 vs. uniprot
Match: A0A6G0WVZ2_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WVZ2_9STRA)

HSP 1 Score: 290 bits (741), Expect = 4.550e-89
Identity = 156/310 (50.32%), Postives = 201/310 (64.84%), Query Frame = 1
Query:  331 MSRSALERQATRAARSGTLPTPT--------SAPAGFLSEVDELTEEQQREIEEANNVLTIHGNDRTFNLNTLLAQTILASEYFKGLAELTNHLEVLDEIYSHCDHVAPWAPGTSRVPSSAFCLLMKLFTLKLTRPQMNEILMHEDSPFIRAIGFLYLRYTCPPKELWGWLEPYVDDEEEFRPSPTEGSMT-MGAWVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVHHLVPGTKVRAIYEDEDNDPSWYDAVIKSVEE-DNYFWVTFPEYGNEELVRLGSIMLQTKTDKSPPR 1230
            MSRSAL R   + A +  +  P         +A AG  SE      E+ R+I+E  N L +HGN  T+N+N LL   I+ S+YF+ L EL  + EV+DEIY   DH  PWA GTSR+PS+ FCLL+K  T++L   QM  +L H DSP+IR +GFLYLRYTC P++LW W  PY+DDEEEF  S  +  +T MGAWVR ++ D+ Y+ T+LPRIP  I+  +K++LLLHE+ KKREK N  IV  LV GTKVRA+Y DE+N P+ YDAVI  V+  D  +WV+FPEYGN E + LG I       KSP R
Sbjct:    1 MSRSALSRHEFQQAMANRMNAPAYYAAVSVPTASAGVYSE------EEARQIKE--NELPLHGNLTTYNINKLLFDNIMNSDYFRKLYELKTYHEVVDEIYYRVDHAEPWAAGTSRIPSTCFCLLLKFCTMRLAVKQMQGLLKHVDSPYIRCVGFLYLRYTCDPEKLWEWYAPYLDDEEEFNASANDKILTTMGAWVRTLLEDVNYFNTILPRIPKKIQDGIKIKLLLHEQRKKREKENQDIVDLLVKGTKVRALYADEENAPAMYDAVIDEVDPTDQTYWVSFPEYGNTEKISLGDIEFDRPKKKSPSR 302          
BLAST of mRNA_H-paniculata_contig8334.16350.1 vs. uniprot
Match: A0A024TH67_9STRA (Pre-mRNA-splicing factor 38 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TH67_9STRA)

HSP 1 Score: 287 bits (735), Expect = 5.130e-88
Identity = 154/309 (49.84%), Postives = 202/309 (65.37%), Query Frame = 1
Query:  331 MSRSALERQ------ATRAARSGTLPTPTSAPAGFLS-EVDELTEEQQREIEEANNVLTIHGNDRTFNLNTLLAQTILASEYFKGLAELTNHLEVLDEIYSHCDHVAPWAPGTSRVPSSAFCLLMKLFTLKLTRPQMNEILMHEDSPFIRAIGFLYLRYTCPPKELWGWLEPYVDDEEEFRPSPTEG-SMTMGAWVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVHHLVPGTKVRAIYEDEDNDPSWYDAVIKSVEEDNY-FWVTFPEYGNEELVRLGSIMLQTKTDKSPPR 1230
            MSRSAL R       A RAA +  +  P   PA  +   +D    E+ R ++E  N L IHGN  T+N NTLL   ++ S+YF+ L ELT + EV+DEIY   DH  PWA GTSR+PS+ FCLLMK  T++LT  QM  +L H DSP+IR +GFLYLRYTC P+ LW W EPY+ D+EEF  S  +    TMGAW+R ++ D+ Y+ T+LPRIP  I+  +KV+LLL+++ KKR   N  IV  LV GTK++A+Y DEDN P+ YDAVI  V+E  + +WVTFPEYGN E V LG I+ +     +PP+
Sbjct:    1 MSRSALTRVELQQALANRAAVANAM-VPMMYPAAAMQVPIDPYYVEEARRVKE--NQLPIHGNQSTYNFNTLLYDNVMNSDYFRKLYELTTYHEVVDEIYYRVDHAEPWAAGTSRIPSTCFCLLMKFCTMRLTINQMQGLLKHVDSPYIRCVGFLYLRYTCDPELLWEWYEPYLGDDEEFNASSNDAIRTTMGAWIRSLLEDINYFNTILPRIPKKIQDGIKVKLLLYDQTKKRHDENLAIVEFLVKGTKIKAMYSDEDNAPAMYDAVIDDVDEATHEYWVTFPEYGNTEKVTLGDILFEKP---APPK 303          
BLAST of mRNA_H-paniculata_contig8334.16350.1 vs. uniprot
Match: A0A225VT78_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VT78_9STRA)

HSP 1 Score: 285 bits (728), Expect = 5.250e-88
Identity = 150/289 (51.90%), Postives = 187/289 (64.71%), Query Frame = 1
Query:  331 MSRSALERQATRAARSGTLPTPTSAPAGFLSEVDELTEEQQREIEEANNVLTIHGNDRTFNLNTLLAQTILASEYFKGLAELTNHLEVLDEIYSHCDHVAPWAPGTSRVPSSAFCLLMKLFTLKLTRPQMNEILMHEDSPFIRAIGFLYLRYTCPPKELWGWLEPYVDDEEEFRPSPTEG-SMTMGAWVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVHHLVPGTKVRAIYEDEDNDPSWYDAVIKSVEEDNYFWVTFPEYGNEELVRLGSI 1194
            MSRSAL R A + +  G             SE D   EE QR +++  + L I+GND T+NLNTLL Q IL S YF  L +   + EV+DEIY   DH  PW+PGT+R+PSS FCLL K F ++LTR QM  +L H+DSPFIR +GFLYLR+TC P+ELW W EPY+ D EEF  S       T+G W+  ++    Y+GT+LPRIP  IE  +KV+LLL    K+R K N  IV  L PG K+RA+Y DE+N+P+ YDAVI SVEE N FWV+FP YGN E V LG I
Sbjct:    1 MSRSALTRHALQKSLRG------------QSEQDNPPEETQRRVKQ--DELAIYGNDTTYNLNTLLHQNILQSAYFHELYKFRTYHEVVDEIYYRVDHAEPWSPGTARIPSSCFCLLHKFFLMRLTRKQMQGLLRHKDSPFIRVVGFLYLRFTCDPEELWTWFEPYLADPEEFNASANPSLKTTIGEWLVSLLEANNYFGTILPRIPKKIEDLIKVKLLLFNHKKERAKENLAIVDRLKPGIKIRAMYADEENEPAMYDAVIDSVEEGNQFWVSFPAYGNTEKVGLGDI 275          
BLAST of mRNA_H-paniculata_contig8334.16350.1 vs. uniprot
Match: W4GRF9_9STRA (Pre-mRNA-splicing factor 38 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GRF9_9STRA)

HSP 1 Score: 286 bits (732), Expect = 1.430e-87
Identity = 140/261 (53.64%), Postives = 183/261 (70.11%), Query Frame = 1
Query:  427 VDELTEEQQREIEEANNVLTIHGNDRTFNLNTLLAQTILASEYFKGLAELTNHLEVLDEIYSHCDHVAPWAPGTSRVPSSAFCLLMKLFTLKLTRPQMNEILMHEDSPFIRAIGFLYLRYTCPPKELWGWLEPYVDDEEEFRPSPTEGSMT-MGAWVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVHHLVPGTKVRAIYEDEDNDPSWYDAVIKSVEEDNY-FWVTFPEYGNEELVRLGSIMLQ 1203
            VD    E+ R ++E  N L IHGN  T+N NTLL   ++ S+YF+ L EL  + EV+DEIY   DH  PWA GTSR+PS+ FCLLMK  T++LT  QM  +L H DSPFIR +GFLYLRYTC P+ LW W EP++DDEEEF  S  +  +T MGAW+R ++ D+ Y+ T+LPRIP  I+  +KV+LLLH + K+R+ AN  IV +LV GTKV+A+Y DED+ P+ YDAVI  V++  + +WVTFPEYGN E V LG I  +
Sbjct:   41 VDPYYVEEARRVKE--NQLPIHGNQTTYNFNTLLYDNVMNSDYFRKLYELATYHEVVDEIYYRVDHAEPWAAGTSRIPSTCFCLLMKFCTMRLTVNQMQGLLKHVDSPFIRCVGFLYLRYTCDPELLWEWYEPFLDDEEEFNASSNDAILTTMGAWIRSLLEDLNYFNTILPRIPKKIQDGIKVKLLLHGQKKQRQAANLAIVEYLVKGTKVKAMYTDEDHPPAMYDAVIDEVDDVTHEYWVTFPEYGNTEKVSLGDIAFE 299          
BLAST of mRNA_H-paniculata_contig8334.16350.1 vs. uniprot
Match: A0A6A3QKY3_9STRA (Pre-mRNA-splicing factor 38 n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6A3QKY3_9STRA)

HSP 1 Score: 281 bits (720), Expect = 1.580e-86
Identity = 149/289 (51.56%), Postives = 189/289 (65.40%), Query Frame = 1
Query:  331 MSRSALERQATRAARSGTLPTPTSAPAGFLSEVDELTEEQQREIEEANNVLTIHGNDRTFNLNTLLAQTILASEYFKGLAELTNHLEVLDEIYSHCDHVAPWAPGTSRVPSSAFCLLMKLFTLKLTRPQMNEILMHEDSPFIRAIGFLYLRYTCPPKELWGWLEPYVDDEEEFRPSPTEG-SMTMGAWVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVHHLVPGTKVRAIYEDEDNDPSWYDAVIKSVEEDNYFWVTFPEYGNEELVRLGSI 1194
            MSRSAL R A + +  G             S  D+  EE QR +++  + L I+GND T+NLNTLL Q IL S YF  L +L  + EV+DEIY   DH  PW+PGT+R+PSS FCLL K F ++LTR QM  +L H DSP+IR +GFLYLR+TC P+ELW W EPY++D EEF  S       T+G W+  ++ +  Y+GT+LPRIP  IE  +KV+LLL    K+R K N  IV  L PGTKVRA+Y DE+N+P+ YDAVI SVEE + F V+FP YGN E V LG I
Sbjct:    1 MSRSALTRHALQKSLRG------------QSAQDQPPEEMQRRVKQ--DELPIYGNDSTYNLNTLLHQNILQSAYFHELYKLRTYHEVVDEIYYRVDHAEPWSPGTARIPSSCFCLLHKFFLMRLTRKQMQGLLRHTDSPYIRVVGFLYLRFTCDPEELWTWFEPYLEDPEEFNASANPSLKTTIGEWLVSLLEENNYFGTILPRIPKKIEDGIKVKLLLLSRKKERAKENLAIVDRLKPGTKVRAMYADEENEPAMYDAVITSVEEGSQFLVSFPAYGNSEKVSLGDI 275          
BLAST of mRNA_H-paniculata_contig8334.16350.1 vs. uniprot
Match: A0A485KYT4_9STRA (Pre-mRNA-splicing factor 38 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYT4_9STRA)

HSP 1 Score: 283 bits (725), Expect = 2.250e-86
Identity = 151/302 (50.00%), Postives = 196/302 (64.90%), Query Frame = 1
Query:  331 MSRSALERQATRAARSGTL----PTPTSAPAGFLSEVDEL-----TEEQQREIEEANNVLTIHGNDRTFNLNTLLAQTILASEYFKGLAELTNHLEVLDEIYSHCDHVAPWAPGTSRVPSSAFCLLMKLFTLKLTRPQMNEILMHEDSPFIRAIGFLYLRYTCPPKELWGWLEPYVDDEEEFRPSPTEGSMT-MGAWVRKIISDMQYYGTMLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVHHLVPGTKVRAIYEDEDNDPSWYDAVIKSVEEDNY-FWVTFPEYGNEELVRLGSIMLQ 1203
            MSRSAL RQ  + A +  +    P   +A A   + +        +E + R ++E  N L +HGN  T+N N LL   I+ S+YF+ L +L  + EV+DEI+   DH  PWA GTSR+PS+ FCLL+K  T++LT  QM  +L H DSP+IR +GFLYLRYTC P+ LWGW  PY+DD+EEF  S  +  +T MGAWVR ++ D+ Y+ T+LPRIP  I+   KV LLLHE+ KKRE  N  I H LV GTK++A+Y DE N PS YDAVI  V+EDN  +WVTFPEYGN E V LG I  +
Sbjct:    1 MSRSALTRQEMQQAMANRMGAVDPAYYAAAAAAAANIANAGAVMYSEAEARHMKE--NELPLHGNQTTYNFNKLLFDNIMNSDYFRKLYDLRTYHEVVDEIFYRVDHAEPWAAGTSRIPSTCFCLLLKFCTMRLTVNQMQGLLKHVDSPYIRCVGFLYLRYTCDPEALWGWYAPYLDDDEEFNASSNDKIITTMGAWVRSLLEDINYFNTILPRIPKKIQDGYKVNLLLHEQKKKRETENQDIAHLLVKGTKIKALYADEVNAPSMYDAVIDEVDEDNLVYWVTFPEYGNTEKVGLGDIQFE 300          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8334.16350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEK1_9PHAE2.890e-17987.38Tudor domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FPC2_ECTSI5.030e-15072.97Tudor domain-containing protein n=1 Tax=Ectocarpus... [more]
K3WW49_GLOUD3.890e-9057.38Pre-mRNA-splicing factor 38 n=1 Tax=Globisporangiu... [more]
A0A0P1ARE8_PLAHL4.420e-8949.67Pre-mRNA-splicing factor 38 n=1 Tax=Plasmopara hal... [more]
A0A6G0WVZ2_9STRA4.550e-8950.32Pre-mRNA-splicing factor 38 n=1 Tax=Aphanomyces eu... [more]
A0A024TH67_9STRA5.130e-8849.84Pre-mRNA-splicing factor 38 n=2 Tax=Aphanomyces in... [more]
A0A225VT78_9STRA5.250e-8851.90Pre-mRNA-splicing factor 38 n=1 Tax=Phytophthora m... [more]
W4GRF9_9STRA1.430e-8753.64Pre-mRNA-splicing factor 38 n=2 Tax=Aphanomyces as... [more]
A0A6A3QKY3_9STRA1.580e-8651.56Pre-mRNA-splicing factor 38 n=20 Tax=Phytophthora ... [more]
A0A485KYT4_9STRA2.250e-8650.00Pre-mRNA-splicing factor 38 n=1 Tax=Aphanomyces st... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8334contigH-paniculata_contig8334:2871..9705 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score454.1
Seed ortholog evalue6.4e-125
Seed eggNOG ortholog2880.D7FPC2
Preferred namePRPF38B
KEGG koko:K12850
KEGG Pathwayko03040,map03040
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0008380,GO:0009628,GO:0009651,GO:0009987,GO:0010035,GO:0010038,GO:0010226,GO:0010467,GO:0016070,GO:0016071,GO:0032991,GO:0034641,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0071011,GO:0071704,GO:0090304,GO:1901360,GO:1990904
EggNOG free text desc.RNA splicing
EggNOG OGsKOG2888@1,KOG2888@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03041
Exons8
Model size1490
Cds size1158
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931047.1873198-UTR-H-paniculata_contig8334:2870..32001622931047.1873198-UTR-H-paniculata_contig8334:2870..3200Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8334 2871..3200 +
1691481565.5260444-UTR-H-paniculata_contig8334:2870..32001691481565.5260444-UTR-H-paniculata_contig8334:2870..3200Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8334 2871..3200 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931047.2019312-CDS-H-paniculata_contig8334:3200..34611622931047.2019312-CDS-H-paniculata_contig8334:3200..3461Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 3201..3461 +
1691481565.539896-CDS-H-paniculata_contig8334:3200..34611691481565.539896-CDS-H-paniculata_contig8334:3200..3461Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 3201..3461 +
1622931047.2205102-CDS-H-paniculata_contig8334:4541..46911622931047.2205102-CDS-H-paniculata_contig8334:4541..4691Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 4542..4691 +
1691481565.5559456-CDS-H-paniculata_contig8334:4541..46911691481565.5559456-CDS-H-paniculata_contig8334:4541..4691Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 4542..4691 +
1622931047.234848-CDS-H-paniculata_contig8334:5397..54571622931047.234848-CDS-H-paniculata_contig8334:5397..5457Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 5398..5457 +
1691481565.5677323-CDS-H-paniculata_contig8334:5397..54571691481565.5677323-CDS-H-paniculata_contig8334:5397..5457Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 5398..5457 +
1622931047.2510335-CDS-H-paniculata_contig8334:6003..61101622931047.2510335-CDS-H-paniculata_contig8334:6003..6110Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 6004..6110 +
1691481565.5806487-CDS-H-paniculata_contig8334:6003..61101691481565.5806487-CDS-H-paniculata_contig8334:6003..6110Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 6004..6110 +
1622931047.2671733-CDS-H-paniculata_contig8334:6627..67121622931047.2671733-CDS-H-paniculata_contig8334:6627..6712Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 6628..6712 +
1691481565.6011934-CDS-H-paniculata_contig8334:6627..67121691481565.6011934-CDS-H-paniculata_contig8334:6627..6712Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 6628..6712 +
1622931047.282804-CDS-H-paniculata_contig8334:7781..79131622931047.282804-CDS-H-paniculata_contig8334:7781..7913Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 7782..7913 +
1691481565.6127431-CDS-H-paniculata_contig8334:7781..79131691481565.6127431-CDS-H-paniculata_contig8334:7781..7913Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 7782..7913 +
1622931047.295802-CDS-H-paniculata_contig8334:8664..88311622931047.295802-CDS-H-paniculata_contig8334:8664..8831Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 8665..8831 +
1691481565.6224875-CDS-H-paniculata_contig8334:8664..88311691481565.6224875-CDS-H-paniculata_contig8334:8664..8831Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 8665..8831 +
1622931047.3160493-CDS-H-paniculata_contig8334:9509..97051622931047.3160493-CDS-H-paniculata_contig8334:9509..9705Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 9510..9705 +
1691481565.6337452-CDS-H-paniculata_contig8334:9509..97051691481565.6337452-CDS-H-paniculata_contig8334:9509..9705Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8334 9510..9705 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8334.16350.1prot_H-paniculata_contig8334.16350.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8334 3201..9705 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8334.16350.1

>prot_H-paniculata_contig8334.16350.1 ID=prot_H-paniculata_contig8334.16350.1|Name=mRNA_H-paniculata_contig8334.16350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=386bp
MSRSALERQATRAARSGTLPTPTSAPAGFLSEVDELTEEQQREIEEANNV
LTIHGNDRTFNLNTLLAQTILASEYFKGLAELTNHLEVLDEIYSHCDHVA
PWAPGTSRVPSSAFCLLMKLFTLKLTRPQMNEILMHEDSPFIRAIGFLYL
RYTCPPKELWGWLEPYVDDEEEFRPSPTEGSMTMGAWVRKIISDMQYYGT
MLPRIPVLIERKMKVQLLLHEEMKKREKANFRIVHHLVPGTKVRAIYEDE
DNDPSWYDAVIKSVEEDNYFWVTFPEYGNEELVRLGSIMLQTKTDKSPPR
PSDSDGRNANGGGKSDRKRSRSDSRDRGRGGGDRDRERDRDRDRGGRDKE
RGGRDDSRDRDRDRDRDRDRDRGARDKIRRRSRSRS
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mRNA from alignment at H-paniculata_contig8334:2871..9705+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8334.16350.1 ID=mRNA_H-paniculata_contig8334.16350.1|Name=mRNA_H-paniculata_contig8334.16350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6835bp|location=Sequence derived from alignment at H-paniculata_contig8334:2871..9705+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTACCCAAGCAACACCAAATCACCAACCGAGGCAATCATTCCAACTTTT TGTGGGAGGGTACCTACTACTCGGCTTGGTCAAAGGTGGAGCCGTCAGCC GGCCACTCGTCTCTCCCCACTACCTATCGCCCGAGCTTCGCGTAGTCCTT GGCGATTCACCTCGCCCTATCTGTGGTTCTGCTGTCGGCTTCTACCAGTT CTTCTCGATCTTTACGCGTGCGCTGATTCGCGTTTTCCCGCCACGAACAC AGGTTGTTGCATCCCCTTCACCAGCAGCAGGGAACCACGACAACTGAGTG CTCAACCAACAGAGTTGTAAGCTATCAACCATGTCTCGCAGTGCGCTTGA GCGTCAGGCGACGCGCGCGGCACGGTCGGGCACGCTACCCACGCCGACGT CGGCACCCGCGGGTTTTTTATCGGAAGTGGACGAGCTCACCGAGGAGCAG CAGCGAGAGATTGAGGAGGCTAACAATGTATTGACCATCCACGGAAATGA TCGGACCTTCAATCTCAACACCCTGTTGGCGCAAACGATACTGGCGAGCG AGTACTTCAAAGGTCTTGCGGAGTTGACGAACCACTTGGAGGTGGGCGCG TGGTAGAATAGGGAACATGTGGAAGGCACCTAAGAGGAATGTCCCTGATC GATCGTGCAGCAGAAATGAAGCCAAAAGGACGGGTTTATTTTGCGTGTTT GCAGATTTGGGTTTTTATATGTGTGTGTGTTTTTTTTTCACAGACGTGTA CAGACTGTCTCGTCGTTTGATACTGCTGTGGATATTACTCTGTTGGTACG CTGTAACTGACAAACCGCCAGTTGCGTTATGTAGTTTCTCATGCCGCCTG CGACCTGTGCAGTCTGCACTCTACGAGCATGAGACCAACTCCTATGGTAA TCAACAGACCAATGGTGTGATCTATTTCTTTACAAAAACATATTTGCAAG ACCCGACCATTTACCACAATCGCAAGTACTTTGGCAGCAATTCGCCGCGT CTCCTTCCCGCACGCAGCAAATCGCCGTGTCATGTCGATGGATGACAAGC CTAGCCAGCACACAATTGGGTCGTCGGCAATCGAGTTGCTTGAAGCACAG ATGTTCCCTGCAAAGGTTGCTCATGGCAAGTGCATGGGACAATGGAAATA AGAATTTCGATGCAGTGCCGAGACCGGCACAGTATCATGGCCGCTAAACG TCTAGTTTGGTTCTTGTACGATGTAAGCTAACCCGAAGATACTACAGCCG TTCGTTTGGTAGAGTACTCTGCGACAACGCCGTACCTCCATCGTGTGGTG CCTTCGCGAGAGTTTACTCTTCGGGCGCTGTTTGCAACACACTGCGGGAT ATCTCTGCACGGTGGACAATTGAGAAGACATTCAGTAATCTATTTTTGCT TTTACGATGAGGTTATTTTTGTTTCAAGAACAAAGTGCCTTCTCCATCAG CTCCATCGTGAAAGCGATGTTATTATGTATACAAAGTGATCCATATGTTT GTTCGTCAGAGATGAAGACAGGTGGTGGGAAATGAATCTCGTCTAAGGGC CAAATTTATAGAGCTACAGTGCACCTCAGTACTTTGTTTTGTACCGGGCT GCGTAGTGAAATGTATAGCTCTACTCGCTCTCCGCCTGGCCTTTTGTTTT TACCCCGTTGTTTTTTTTCAGGTTTTGGACGAGATATATTCGCACTGCGA TCACGTGGCACCTTGGGCACCGGGCACCAGCCGCGTTCCTTCCTCCGCGT TTTGCCTATTGATGAAGCTCTTCACGCTCAAGCTCACCAGGCCGCAAATG AACGAGATTCTTATGCACGAGGTGTGTGGTGAGACCCCCAACTATTCGTA CGCCGATTAGGACAACTGTTCCTGCGTAATCTATCTTGTGTAAAAACTAG CATTTGTCGCTATAAATTTTCGTCGACATCTGATGGGGTTATTATTATTG TTGTTGTCATTGGTCGAAATCGTGGTGGTATTGTCGTAGGCGTCGTTGGT GTTGTCGTTGTTATTATTGTTTTTGCTAATGTGCAGCGTTCACTGAACAC CAGATGAAAATCAGTATTGCAACTATTTTTGCTTTCTTTGTTGCCAGAAG TTGTTTTGTAGTAATTAAATATGCCAACATGCTAGTGACTGTCAGCATCG GATCAGGCTTATCCGAATGCTGACCAATAATGAACATTAGGCGGTATGGA TCGTGGGCCAGAGAGCTCTTGTATCCAGCAAAAAAAATGCCCTGTTGTAG GTCTCCGTATCCTGTCGTTGCTCCGTCCACCGCACACTCAGCTGGAAGAT CTCGAGTGTGTTCCCTATCAGTATCATCATACCACGTGCTCCACACGACC GCACGCTAAAGCAGAAACGCCAGAGTCCACCGCATATCGGCTGCTTATAA CATGTTTCATCCCTCATACCTTCTGCTTCCACTTTTTTGTTTGTCCCCAT TGGTCTGTCTGATTTGGTCGTCGTCCTCATTCCTGATTTGTTTCCTTTTG TCACGCGTGGTTCGTCATTCTCCACAGGATTCGCCGTTCATTCGAGCTAT TGGGTTCCTGTATCTGCGCTACACCTGTCCGCCGAAGGTTAGAAATCCTC TTCCCAAATGAGTCATGTTTTCGGTAATTTATCTCAAATGAATACAGCAC TGATGCGATGCTAAAGAATTCACATGTTGGGTAGGGTCAATGCCTTATTA TGTGCTTTTACCCGCAATACGAAGTTCTTGAGATTATTCCGTAGCAGTTG GTGCGGGGCCGCAACCTGAGCTCAGTTTGATTTCCGTATTTCTTGAGTTT TATTCTTTTTTTTATCCTGAACACTCCTTGGCTCCTAATTCCCAAGTTCT CATCACGCCGGTGCTGTATATATAAACGTCGAAAACGAGCTCTTTTATCG ATAGTCGGCGCATTAGCGACAGTAAGCCGCATGTAGTAAGGACCTATACT GGACTCCTTCGTCAAATGCCTTACCCTTGAAATACTCTTTTTTTTTTTCT TTTTTTTTATACAATTTTGCGGGAGAAAGTGCCTGTTGACGGTTACAAAA TCACCACCGACCTACCCTATCTGTTTATTCAATTGACTACGGTGCGACTT AACGTGTACTGGAATTTTGTTGTTACCGAACAGGAGCTATGGGGATGGCT AGAACCGTATGTCGACGACGAGGAAGAGTTCAGGCCGTCCCCGACGGAGG GGTCCATGACCATGGGGGCTTGGGTCCGCAAGATTATCAGGTGAGTGCTT GTTGCTTTCTCATGTCATTGCGTTAGCCCAGAGCTGGTGCATTGCTGTTG GCCATAGAGTGCGAGTAAGTGCTATGCTTTGACCCGTCAACATAACCTCC TCCCCCCACCCGCTCAAATAAACAAATAAAAATGAAAGAATGCGATAGAG CAGCATTTGGATCCTGGGATTGCGAAACGAAAGTTATAGCGGTTGTAGCA GATTGAAATTGCTCCGAACAGGCGAGGGTTGAGGTAGACAGAACGTTTGA CGACATGAGAAAGGTGAAAAAGGATTGACCGTCTAAAATCGCTGTCACAG GAACAAAACTCTGTCCTCTCGAGGACATGTGGTGAATGTTCTAACAATAA CAACTACGACATGCCAAACATGAGTAATTCCCCTGTACCCCACATTTATC CTGCGCCCTCCCAAGTACACGTGGTCAATGGTCCGTCGACTAAGAAATGC AAAAGGTAGATACACCCTCCGTCTCCCTCCCTTCCCTCCGCACTCGCCGC TTTTTAGTGACATGCAGTATTACGGCACCATGCTGCCGCGGATTCCTGTT TTGATCGAGCGTAAGATGAAGGTCCAGTTACTACTACACGAGGTGAGACA AGTCCAATATGGCGTGTTTTTGATTTGCCACGACTAGCAACAATCAATCG TCCCTGAGGTCACCCACAATTTGATATATCTCCACCTGCACGGTCTCATT TCTACGTGGGAGGAACCGAGATCACGACACTTTTTTTTTTTTTTTTTTTT TTTTAAATACGTTTTCCTTTTTGCCCGCAAGGAGTTTGTTTCCTTTTGTG ACGTCAAAAGAACGATGGGATGCTCTCTTAATTTTTTTTTTTTCAAACAT GCAACATGTGTAATGCTCGTGCAGTAATGTAATAATAATAATTCCAGGTT TTTGGTACTCAGAGGGTTTGTTAAAAAAAAGTGACGGCCGTTTCGGAACA AAAAAATGCTTTTTATCCGAAACGTCATATCTGGGTAGTCGCCATTGAAA GTAGTACCTACTCGTGTATTCCCAGGGTCATTGACCATCTTTATCCCTCC TACACGCGCAACTGGCTACCTGTACGTCGCGAGGGTTATGAGTAACCGGT CGGATGTAGCATGTACCTACATTGCGAAGTTAGTTTCCCAATGCTGCGGG CGCTGGAACAATTGCATGGCGACGTCTTGGCCTTTCGCGCTCGCCAGTAT TGCGTGAAAAACCCTAGAAAAACAAATGTTTAGTTACGTTAGAAGATAAA TAGACTGCGTTGGGAAAGAAATAAAGCCAATGATAAAAAGCTGAGAGAGC GCTCCTGCGGTGGTTTTGCGCAAAATCATGCCAATGCGTATGTGTCCGTC CTCTATCAATTTCTGCGCTGGACTGGGTTTATGAACAGCGGCGGCTCGCT ACTTCCTGCCCTTTTTTTTTTTTTCAGGGTGGGGATTAAGTGGAGCTTCC GTGGAGAGCGGCGCCCCTCAAAGGGCCGAAGGTAACATGGCGTTAACAGT AAAAAAGGGTTACTCAAGCATCTTTTGCTAGTCAACACCACAATGTTGTT TTCTTGTAAACGGCCAAGATAATTATGGTTTAACAGTTGATGTCCTTGGC ATACTTGAGGTATTCATCGTAAAAAAACTAACGCATGACCATATATGTAT GCGATTGGCAGGAGATGAAGAAGCGTGAGAAGGCGAACTTTCGTATTGTC CATCACCTCGTGCCTGGCACTAAGGTGCGTGCCATCTACGAGGATGAGGA CAACGATCCTTCTTGGTACGATGCTGTCATCAAGAGCGTCGAGGTGAGCG GTCACCCAATCAAAAAGCGAAACGCAGAGATCAAGCACAGGATTAAAAAA AAAAAAAAAGGGTATGCTTCCCTTGTTCCTGGCGTTCGAACGATACCTCG CGTCCCAATTTTTGCTGGGTAGTTCCAAAGATCCGAAGATAAGAAGACAC TTGGATTTGTGGCGCAAATTGAAATATATATAGGTATGTGCGTTCCATGT GGAATGGCTTTTTCCCGTATTTTTTTGTGAGCACATGAGCCGCCGCAACA CATTGTACAAGGTTCTGTCCAGTTATTATAACAAAATGAGATGTGTATGT ACACGGAAAACCATGTGGAACTCTCCTCCTATATATATATATATATATAT TTATTTATTTATTTTTTGTTCACCCCCCGAACAAATACGAATACATGCAA ATGTTTTTCACAAAAAATTGGACGTATTCGCGTGAGGTTTATAATGAGCT CGTGTGTTCTATGTGTCTCCGAACCATACACGACTGCCAATTATACTCGT AAATCGAATGGACAGGGGTGGGTACTTTGTTTTATGTGTCCGCTCATTCT GAAACTCAGGCGAATACTTTTGGAGTTTTGTTGTAAAAAACCAATTGCAA GCATTCGCATTTGTCCTGGGGGTAAAGTATTTCCTTATTGTTGTTTGTGT TGCTGCTATCTCCCCTATATCTCGATTGATTGATCGATCGATCGATCGAT CTCCGCTCTTTCTAATATGATCCCCTCGTTCGTTTGGTCTCCAGGAGGAC AACTATTTCTGGGTAACCTTCCCGGAATACGGCAATGAAGAGCTGGTGAG GCTGGGGTCCATCATGCTCCAGACCAAGACAGACAAAAGCCCTCCCCGCC CGAGCGATAGTGATGGCAGGAATGCAAACGGCGGGGGGAAGTCGGACAGA AAGCGAAGCAGGTACCTACCGCATGTTGTAGATTCGCGCCGTTAACACAG AAAAAAAAGAAGTGGATGAGGCCATAATAAGAGTCGTGACGTTTTTTTCG AGAAACGCAAGTTCTTTCGGCAAATTTGATCTGGTCGCGTGTATAGCTGA CGGTGAGCTCCTCGTTCTGGATCCAAGTCCATCTACATCAACGTTTCCTT AGAACACAATACCCGCTCTCACGGTCAATGACACTCGTATCTCACAGAAT ACACGGATTTTGAAGAGGAATTTATTTCGTAACGAGAGAGAGGTTGGTGT GGGTAAGTTGGGGTCCGGACGGGGGGTCTGTGACGAGCAGCTAGCTCACT GTTGGCTGTATACGACCATATCAAAAGGATTTTGTTTTTTTGCAAACAAA TTTAATAACCCTCTCAGAAAAGATACTAGTAGTTGGATGGGTGGGTGGGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTCCTA CGGAATCCGTGTGTGTATTCGCAGTAGTATAGCGTGGGTTTGCTCTCTAG TTAACTTTTTTTTGCCTCTTTCGTCGGGTCACAGAAATCCCAACTATACT AGTTCATCGAAATACTAGTCACTACCAAACTGCTTCAGCTCCTCCGTTGC ACTTTTTTTTTTTTTTTTTTTTTTCTCTCCATACCTCAGGAGCGACAGTA GAGACCGCGGGAGGGGCGGAGGCGACCGGGACAGGGAAAGGGATAGGGAC AGAGATAGAGGAGGCCGTGACAAGGAGCGAGGGGGCAGGGATGATAGCAG AGACAGGGACAGGGACAGAGACAGAGACAGAGACAGAGACAGAGGGGCAA GGGACAAGATTCGGAGGCGTAGCCGAAGCCGCAGC
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Coding sequence (CDS) from alignment at H-paniculata_contig8334:2871..9705+

>mRNA_H-paniculata_contig8334.16350.1 ID=mRNA_H-paniculata_contig8334.16350.1|Name=mRNA_H-paniculata_contig8334.16350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2316bp|location=Sequence derived from alignment at H-paniculata_contig8334:2871..9705+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTCGCAGTGCGCTTGAGCGTCAGGCGACGCGCGCGGCACGGTCGGG
CACGCTACCCACGCCGACGTCGGCACCCGCGGGTTTTTTATCGGAAGTGG
ACGAGCTCACCGAGGAGCAGCAGCGAGAGATTGAGGAGGCTAACAATGTA
TTGACCATCCACGGAAATGATCGGACCTTCAATCTCAACACCCTGTTGGC
GCAAACGATACTGGCGAGCGAGTACTTCAAAGGTCTTGCGGAGTTGACGA
ACCACTTGGAGATGTCTCGCAGTGCGCTTGAGCGTCAGGCGACGCGCGCG
GCACGGTCGGGCACGCTACCCACGCCGACGTCGGCACCCGCGGGTTTTTT
ATCGGAAGTGGACGAGCTCACCGAGGAGCAGCAGCGAGAGATTGAGGAGG
CTAACAATGTATTGACCATCCACGGAAATGATCGGACCTTCAATCTCAAC
ACCCTGTTGGCGCAAACGATACTGGCGAGCGAGTACTTCAAAGGTCTTGC
GGAGTTGACGAACCACTTGGAGGTTTTGGACGAGATATATTCGCACTGCG
ATCACGTGGCACCTTGGGCACCGGGCACCAGCCGCGTTCCTTCCTCCGCG
TTTTGCCTATTGATGAAGCTCTTCACGCTCAAGCTCACCAGGCCGCAAAT
GAACGAGATTCTTATGCACGAGGTTTTGGACGAGATATATTCGCACTGCG
ATCACGTGGCACCTTGGGCACCGGGCACCAGCCGCGTTCCTTCCTCCGCG
TTTTGCCTATTGATGAAGCTCTTCACGCTCAAGCTCACCAGGCCGCAAAT
GAACGAGATTCTTATGCACGAGGATTCGCCGTTCATTCGAGCTATTGGGT
TCCTGTATCTGCGCTACACCTGTCCGCCGAAGGATTCGCCGTTCATTCGA
GCTATTGGGTTCCTGTATCTGCGCTACACCTGTCCGCCGAAGGAGCTATG
GGGATGGCTAGAACCGTATGTCGACGACGAGGAAGAGTTCAGGCCGTCCC
CGACGGAGGGGTCCATGACCATGGGGGCTTGGGTCCGCAAGATTATCAGG
AGCTATGGGGATGGCTAGAACCGTATGTCGACGACGAGGAAGAGTTCAGG
CCGTCCCCGACGGAGGGGTCCATGACCATGGGGGCTTGGGTCCGCAAGAT
TATCAGTGACATGCAGTATTACGGCACCATGCTGCCGCGGATTCCTGTTT
TGATCGAGCGTAAGATGAAGGTCCAGTTACTACTACACGAGTGACATGCA
GTATTACGGCACCATGCTGCCGCGGATTCCTGTTTTGATCGAGCGTAAGA
TGAAGGTCCAGTTACTACTACACGAGGAGATGAAGAAGCGTGAGAAGGCG
AACTTTCGTATTGTCCATCACCTCGTGCCTGGCACTAAGGTGCGTGCCAT
CTACGAGGATGAGGACAACGATCCTTCTTGGTACGATGCTGTCATCAAGA
GCGTCGAGGAGATGAAGAAGCGTGAGAAGGCGAACTTTCGTATTGTCCAT
CACCTCGTGCCTGGCACTAAGGTGCGTGCCATCTACGAGGATGAGGACAA
CGATCCTTCTTGGTACGATGCTGTCATCAAGAGCGTCGAGGAGGACAACT
ATTTCTGGGTAACCTTCCCGGAATACGGCAATGAAGAGCTGGTGAGGCTG
GGGTCCATCATGCTCCAGACCAAGACAGACAAAAGCCCTCCCCGCCCGAG
CGATAGTGATGGCAGGAATGCAAACGGCGGGGGGAAGTCGGACAGAAAGC
GAAGCAGGAGGACAACTATTTCTGGGTAACCTTCCCGGAATACGGCAATG
AAGAGCTGGTGAGGCTGGGGTCCATCATGCTCCAGACCAAGACAGACAAA
AGCCCTCCCCGCCCGAGCGATAGTGATGGCAGGAATGCAAACGGCGGGGG
GAAGTCGGACAGAAAGCGAAGCAGGAGCGACAGTAGAGACCGCGGGAGGG
GCGGAGGCGACCGGGACAGGGAAAGGGATAGGGACAGAGATAGAGGAGGC
CGTGACAAGGAGCGAGGGGGCAGGGATGATAGCAGAGACAGGGACAGGGA
CAGAGACAGAGACAGAGACAGAGACAGAGGGGCAAGGGACAAGATTCGGA
GGCGTAGCCGAAGCCGCAGCGAGCGACAGTAGAGACCGCGGGAGGGGCGG
AGGCGACCGGGACAGGGAAAGGGATAGGGACAGAGATAGAGGAGGCCGTG
ACAAGGAGCGAGGGGGCAGGGATGATAGCAGAGACAGGGACAGGGACAGA
GACAGAGACAGAGACAGAGACAGAGGGGCAAGGGACAAGATTCGGAGGCG
TAGCCGAAGCCGCAGC
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