mRNA_H-paniculata_contig8301.16327.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8301.16327.1 vs. uniprot
Match: A0A6H5KTT2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTT2_9PHAE) HSP 1 Score: 224 bits (572), Expect = 1.440e-68 Identity = 133/230 (57.83%), Postives = 150/230 (65.22%), Query Frame = 1
Query: 1 SIGNYKGVMLCNRPFAGTAAASKGGGGDGATASGKHVFVTGKVKSEVGFAGKNLQNEKLLRKRVKQETALTRHRRWLADLQLTKQALEEKYMEDLQRKDENKKRFAKREAQMRQMTRELAQGNNDAK---------------HCGHDGDSDESIAAPIHD-----------------------------------DSIELRAVEKRRKRDGKPCRPMWAMTETKAVAETE 540
SIGNYKGVMLCNRPFAGTAAA+KGGG +G A+GKH FVTGKVKSEVGFA K+LQ EKLLRKRVK+ETALTRHR+WLADLQLTKQALEE+YMEDLQ+K+ENK+RFA+REA+MRQMTREL +D K G D D + H+ D EL+AVEKRRKRDGKPCRP WAMTE +A E E
Sbjct: 25 SIGNYKGVMLCNRPFAGTAAAAKGGGDNGGAAAGKHAFVTGKVKSEVGFADKSLQTEKLLRKRVKRETALTRHRKWLADLQLTKQALEEQYMEDLQKKEENKRRFAQREARMRQMTRELGAAASDRKIGQGYGNEEQGSKAWAIGLDDDVEPETTTKNHNRPCSVLNADDRLDGKEEGGSSRPELEEEEGVGNRIDPSELKAVEKRRKRDGKPCRPKWAMTEAEAQVEDE 254
BLAST of mRNA_H-paniculata_contig8301.16327.1 vs. uniprot
Match: A0A7S2FR48_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FR48_9STRA) HSP 1 Score: 122 bits (306), Expect = 4.630e-30 Identity = 80/196 (40.82%), Postives = 115/196 (58.67%), Query Frame = 1
Query: 1 SIGNYKGVMLCNRPFAGTAAASKGGGGDGATASGKHVFVTGKVKSEVGFAGKNLQNEKLLRKRVKQETALTRHRRWLADLQLTKQALEEKYMEDLQRKDENKKRFAKREAQMRQMTRELAQGNND-------------AKHCGHDGDSDESIAAPIHDD---SIELRAVEKRRKRDGKPCRPMWAMTETKAVAETE 540
SIGNYKGVMLCNRPFAG AAA++ GG K FV G V +G A ++ + KR K+ETAL+RH++WL DLQ TK LE+ Y+++++RK+E KKRF +RE++MR + R G++ A++ D+ E + ++ ++EL A EK R++ G+ RP WA+TE KA E
Sbjct: 19 SIGNYKGVMLCNRPFAGVAAAAQNAGGPA-----KAAFVCGTVPGHMG-ANAPPRDLAVTVKRTKKETALSRHKKWLQDLQSTKNQLEQSYLDEIKRKEEAKKRFMERESKMRAVIRASRDGDSTVLSATMSASMAVPAENKAERSDAKEEVPEDDEEEIAVAVELAAAEKLREKQGRANRPAWALTEDKAKEAAE 208
BLAST of mRNA_H-paniculata_contig8301.16327.1 vs. uniprot
Match: A0A7S2WRE5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WRE5_9STRA) HSP 1 Score: 122 bits (305), Expect = 2.160e-29 Identity = 89/222 (40.09%), Postives = 119/222 (53.60%), Query Frame = 1
Query: 1 SIGNYKGVMLCNRPFAGTAAASKGGGGDGATASGKHVFVTGKVKSEVGFAGKNLQNEKLLRKRVKQETALTRHRRWLADLQLTKQALEEKYMEDLQRKDENKKRFAKREAQMRQMTRE---------------------LAQGNNDAKHCGH----DGDSDESIAAPIH-----------------DDSIELRAVEKRRKRDGKPCRPMWAMTETKAVAETE 540
SIGNYKGVMLCNRPFAG AA++ G K FV G V S +G G+ +++ L KR K+ETALTRHR+WLA+LQ TK LE+ Y+E+L +K+E+KKRF REA+MR + + +A + A+ G +G +ES A D ++ L A EKRR++ GK RPMWA+TE KA +E
Sbjct: 90 SIGNYKGVMLCNRPFAGVQAAAQHQASGGPA---KAAFVCGNVPSAIGAGGR--RSDLSLVKRTKKETALTRHRKWLAELQRTKVELEKNYLEELHQKEESKKRFMAREARMRALVTQANAAEPKAEEAAVATGGALAAMAAAKDAAEFDGKAGPLEGKGEESPKASAXXXXXXXXXXXLSSAAEGDAAVALAAAEKRREKQGKVSRPMWALTEDKAHEASE 306
BLAST of mRNA_H-paniculata_contig8301.16327.1 vs. uniprot
Match: A0A836C827_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C827_9STRA) HSP 1 Score: 117 bits (293), Expect = 6.390e-28 Identity = 78/192 (40.62%), Postives = 112/192 (58.33%), Query Frame = 1
Query: 1 SIGNYKGVMLCNRPFAGTAAASKGGGGDGATASGKHVFVTGKVKSEVGFAGKNLQNE--KLLRKRVKQETALTRHRRWLADLQLTKQALEEKYMEDLQRKDENKKRFAKREAQMRQMTRELAQGNNDAKHCGHD-----GDSDE--------SIAAPIHDDSIELRAVEKRRKRDGKPCRPMWAMTETKAVA 531
SIGNYKGVMLCNRPF G +AA++ GA ++ FVTG V++EVG++ ++ +++ K+V+++ AL RHRRWLADLQ TK ALE++Y+E+L++K+E ++F++RE++MR+M D H H G DE H S E + RK RP WA+TE KA A
Sbjct: 28 SIGNYKGVMLCNRPFGGVSAAARETREKGAVSATAGRFVTGVVQTEVGYSSAQAASKGTRVVCKKVRKDNALARHRRWLADLQRTKDALEKQYIEELEQKEEAARKFSERESRMRRMYIATGSVYPDRHHEPHAPADVAGSDDEREHIYDEDKAQQQSHGSSPEADDHREDRKHKSASARPKWALTEAKAAA 219
BLAST of mRNA_H-paniculata_contig8301.16327.1 vs. uniprot
Match: F0YGQ4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGQ4_AURAN) HSP 1 Score: 111 bits (277), Expect = 2.420e-26 Identity = 75/184 (40.76%), Postives = 99/184 (53.80%), Query Frame = 1
Query: 1 SIGNYKGVMLCNRPFAGTAAASKGGGGDGATASGKHVFVTGKVKSEVGFAGKNLQNEKLLR--KRVKQETALTRHRRWLADLQLTKQALEEKYMEDLQRKDENKKRFAKREAQMRQMTRELAQGNNDAKHCGHDGDSDESIA--APIHDDSIELRAVEKRRKRDGKPCRPMWAMTETKAVAETE 540
SIGNYKGVMLCNRPF G SKG AS K FV G V + G EK + ++ETAL RHR+WLA+LQ TK+ LE+ Y+ D+Q K++ KRF +REA+MR M R+ D + D +E+ A D + E K P RPMWA+TE +A++ +
Sbjct: 8 SIGNYKGVMLCNRPFVGMVGTSKG-----VAASAKQAFVCGNVGDKPGTNVPISSKEKAATTDQHPRKETALQRHRKWLAELQATKEQLEKHYLADVQMKEDRHKRFMEREARMRAMVRKAKDSVLDFESQAKDEHGEETSVEKASFEDSTRETYPTVADGKSPAPPSRPMWALTEQQALSSVD 186
BLAST of mRNA_H-paniculata_contig8301.16327.1 vs. uniprot
Match: A0A8J2WVF2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WVF2_9STRA) HSP 1 Score: 108 bits (270), Expect = 4.830e-25 Identity = 75/180 (41.67%), Postives = 108/180 (60.00%), Query Frame = 1
Query: 1 SIGNYKGVMLCNRPFAGTAAASKGGGGDGATASGKHVFVTGKVKSEVGFAGKNLQNEKL--LRKRVKQETALTRHRRWLADLQLTKQALEEKYMEDLQRKDENKKRFAKREAQMRQMTRELAQGNNDAKHCGHDGDSDESIAAPIHDDSIELR---AVEKRRKRDGKPCRPMWAMTETKA 525
SIGNYKGVMLCNRPF G + SK GG A K FV GKV +++G A + K+ + +R ++ETAL RHR+WLA+LQ TK LE +Y++D+Q+K+ K+F REA+MR++ R++ +D + D DS E +D++ + + E G RPMWA+TE +A
Sbjct: 8 SIGNYKGVMLCNRPFVGAVSQSKKGG-----APAKQAFVCGKVDNKLG-ATIPISKGKIAKINQRSRKETALQRHRKWLAELQATKDQLEMQYLKDIQKKETKHKKFMDREAKMREVVRKV---RDDRTYGCADLDSQEKYDKNQVNDNVVMEVELSPEASSGAAGDSSRPMWALTEDQA 178
BLAST of mRNA_H-paniculata_contig8301.16327.1 vs. uniprot
Match: A0A7S3HD88_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HD88_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.000e-18 Identity = 72/194 (37.11%), Postives = 100/194 (51.55%), Query Frame = 1
Query: 1 SIGNYKGVMLCNRPFAGTAAASKGGGGDGATASGKHVFVTGKVKSEVGFAGKNLQNEKLLRKRVKQETALTRHRRWLADLQLTKQALEEKYMEDLQRKDENKKRFAKREAQMRQMTREL------------AQGNNDAKHCGHD-GDSDESIAAPI-HDDSIELRAVEKRRKRDGKPCRPMWAMTETKAVAETE 540
SIGNYKGVMLCNRPF GT A +K GG G K F G V G +K+L K + + L +H++WL+DLQ TK LE +Y+E+ +RK+E++++F E +MR R A+G+ H G+D GD ++ A DS A K +++ KP WAMTE A + E
Sbjct: 26 SIGNYKGVMLCNRPFGGTVA-NKAPGGSGGE---KTTFNCGVVSEPAGLNVPIGSKQKVL-KYTNKNSVLAKHKKWLSDLQKTKDRLEVEYLEEAKRKEESQQKFQDHEKKMRLAARTALRTGDDEKDAKDAKGSGPESHGGYDFGDGEDKAQAKYTSSDSATAAAGSKHQQQQAKPA---WAMTEKAADNQFE 211
BLAST of mRNA_H-paniculata_contig8301.16327.1 vs. uniprot
Match: A0A7S4DFM4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFM4_HETAK) HSP 1 Score: 87.8 bits (216), Expect = 1.350e-18 Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 1
Query: 4 IGNYKGVMLCNRPFAGTAAASKGGGGDGATASGKHVFVTGKVKSEVGFAGKNLQNEKLL-RKRVKQETALTRHRRWLADLQLTKQALEEKYMEDLQRKDENKKRFAKREAQMRQMTR 351
IG+YKGVMLCNRPFAG A ++G GA G+ F G V + G EK+L RK+ K+++AL+RH++WL DLQ TK+ LE +Y+ + RK++++K F + +A+MR + R
Sbjct: 36 IGSYKGVMLCNRPFAGAAVGAQGQSAQGA---GEGAFNCGIVPKKAGANVPISNKEKVLQRKKSKKDSALSRHKKWLNDLQKTKERLESEYLTEADRKEKSRKAFMENQAKMRSLVR 149
BLAST of mRNA_H-paniculata_contig8301.16327.1 vs. uniprot
Match: A0A7S2GJB4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GJB4_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 5.390e-18 Identity = 60/121 (49.59%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 13 YKGVMLCNRPFAGTAAASKGGGGDGATASGKHVFVTGKVKSEVGF---AGKNLQNEKLLRKRVKQETALTRHRRWLADLQLTKQALEEKYMEDLQRKDENKKRFAKREAQMRQMTRELAQG 366
YKGVMLCNRPFAG AAA+ G G G T K FV G V ++G G N + KR K+ETALTRH++WL DLQ TK LEE Y+ +++ K+E+KKRF + EA+ R E G
Sbjct: 1 YKGVMLCNRPFAGAAAAANTGVG-GVT---KTAFVCGNVPDKIGTNVPVGTREVNTAV--KRTKKETALTRHKKWLRDLQRTKDELEETYVNEMKSKEESKKRFMESEAKKRANRNESKTG 115
BLAST of mRNA_H-paniculata_contig8301.16327.1 vs. uniprot
Match: A0A1V9ZJS8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZJS8_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.770e-14 Identity = 54/127 (42.52%), Postives = 73/127 (57.48%), Query Frame = 1
Query: 1 SIGNYKGVMLCNRPFAGTAAASKGGGGDGATASGKHVFVTGKVKSEVGFAGKNLQNEKLLRKRVKQETALTRHRRWLADLQLTKQALEEKYMEDLQRKDENKKRFAKREAQMRQMTRELAQGNNDAK 381
+IGNYKGVMLCNRPF + SK ++ K F+ G S VG KR K+ TAL++H++WL DLQ ++ LEE MED K+E K+RF+KREA+MR R+ ++D K
Sbjct: 1163 NIGNYKGVMLCNRPFNSVSTVSKE-----VDSAKKAPFLGGIQPSHVGQNVPIFNESPHAVKRDKKNTALSKHKKWLYDLQKERERLEEVLMEDEASKEERKERFSKREAEMRNKVRQRMPQDDDDK 1284 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8301.16327.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8301.16327.1 >prot_H-paniculata_contig8301.16327.1 ID=prot_H-paniculata_contig8301.16327.1|Name=mRNA_H-paniculata_contig8301.16327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=172bp MLCNRPFAGTAAASKGGGGDGATASGKHVFVTGKVKSEVGFAGKNLQNEKback to top mRNA from alignment at H-paniculata_contig8301:7286..8005+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8301.16327.1 ID=mRNA_H-paniculata_contig8301.16327.1|Name=mRNA_H-paniculata_contig8301.16327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=720bp|location=Sequence derived from alignment at H-paniculata_contig8301:7286..8005+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8301:7286..8005+ >mRNA_H-paniculata_contig8301.16327.1 ID=mRNA_H-paniculata_contig8301.16327.1|Name=mRNA_H-paniculata_contig8301.16327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1032bp|location=Sequence derived from alignment at H-paniculata_contig8301:7286..8005+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |