mRNA_H-paniculata_contig8301.16326.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8301.16326.1 vs. uniprot
Match: D8LJZ7_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJZ7_ECTSI) HSP 1 Score: 590 bits (1521), Expect = 2.640e-195 Identity = 410/845 (48.52%), Postives = 484/845 (57.28%), Query Frame = 1
Query: 499 LRLAIIGVGADEVGVMMRGRFGSTVISMDELMKGRRGRRTETVKAKAVSNWL-TEEGSADRILTGFPTTVAEAEALEKFGVKFADLVVL-----VPDVGCSEVMESIMELY----EGKVTKVSYEKDVATMCTSAVSLLGFDAPRSATNVEDNSAARVAAAPSFGFIHMEGEQVNRSHGAQGENTVAIDKITGAKNASADE-ELSAAPDE--RDEVTTMSPSEHILAKKRGTAAHDEVIQAA-------KRGAELKRAQKQAIREKKRAANEAQRLDTPFYVAVASGKPKARYHAPVPIVPSRITERLSSAVADDDTN----------VNTQLEFGPLVIDSPASDCLLAAGIRQPTGIQMEGMGAIADGESVILHAMTGSGKTLAFLLPLMQRWTPSLFDTKGGRSAATAVAAVNGAR---------SDGAFRVLLALPTRELAIQVAREAVLLAGGVTAYVELLVESGVHHDLGKVTAPIVVGSAKVLERIIRKSRPTVRNDVLSRIECIVVDEVDRLVDVLPKHTPPREVEKRKKHARPIAALLGKVVEAKPDVQVVACSATIGRPLRRELTNIVRSAAATDATVDRLNDDGTTRYDPRVIRDPFA-----TSSDDDLSSERA--------RVTAVVAHLRRAGGNVGRNAMALHEAMGFGSGSDEXXXGGGGSVGGVRGKHSSEAILQHDKLTGQFRGVGRGSSPSRNP--------------------------GAGENDLLLGGMGLG--RLAEG----ETGAILVTGEDSARGLHFDDVDFVFLMHKPKNPDEYVHLAGRTGRQGKEGNVVTLVSVEEFRKMRSWSSSLKVYFENMNI 2781
LRLAI+G ADE+G+ + R G SMD LMKGR+GR+T+ VKAKA + WL T S +LTGFPTT +AE LEK GV LV+L P+ +E + L EGKV K+ ++DV ++C SA SLL + G Q ++ A+ + A A E SA P RD MSPSE +A+ E ++AA + GA+ KRA+K AIR KKR ANEAQ+LDTPFYVAVA G PKAR+ PVP+VPSRITERLSSA + VNT+L+FGPLV+DSPASDCLLAAGI +PTGIQ GMG I +GESVILHAMTGSGKTL FLLPLMQRWTP L T +AA A A VNG R S +++LLALPTRELA+QVARE VLL+GG+TA VELLV++ HDL KVTAPIVVGSAKVLER IRKSRPTVR DVL RI+CIVVDEVDRLVDVL KH P +E EKRK+HARPIAALL +V+ A + Q C + R L +V + + D P D F+ T++ +L R RVTAVVAHLRRAGG VG A+ALHEAMGF S D G VRG+H SEAI QHD+L G G R P G+ LL GG+G G RL G E G +LVTGE SARGLHFDDVDFVFLM KPK+PDEYVHLAGRTG FRK++ WS SLKV FE ++I
Sbjct: 28 LRLAIVGENADELGLRIAERHGLVATSMDGLMKGRKGRKTDNVKAKAAAEWLGTCPASTGGVLTGFPTTATQAELLEKQGVGVEQLVLLERAGAAPEEAANESEGGELHLLTSRLEGKVVKLPSQQDVDSLCDSAASLLA------------------------------------ASGGQQRSSAALRDVDDAPAPPAKAAETSALPPSTLRDADMMMSPSELAVARAEAADPEPEGVEAADHRRARSRAGAKAKRAEKAAIRRKKRMANEAQQLDTPFYVAVAQGGPKARFRPPVPMVPSRITERLSSAASPGSGEXXXXXXXXAAVNTRLDFGPLVLDSPASDCLLAAGITEPTGIQQAGMGPILNGESVILHAMTGSGKTLTFLLPLMQRWTPGLLSTS---AAAAASAGVNGERASDKAGGGVSHAPWQLLLALPTRELAVQVAREVVLLSGGLTASVELLVDANTFHDLSKVTAPIVVGSAKVLERRIRKSRPTVREDVLPRIKCIVVDEVDRLVDVLSKHAPAKEAEKRKRHARPIAALLERVLAANGEAQ---CRKPRAQGHPRRLLRVVGPKPGHRSGAVVIPDTIRHYCVPLGDGDFFSRLEGLTAAVRELQPRRPLIFVPPQERVTAVVAHLRRAGGAVGARAVALHEAMGFVSDED---------FGVVRGRHFSEAIEQHDRLVAGQSLAGGGEGGGREPXXXXXXXXXXXXXADESGVVTGAGGSGSSSGHLLAGGVGPGGMRLRNGDGDAEVGDVLVTGEGSARGLHFDDVDFVFLMQKPKSPDEYVHLAGRTGXXXXXXXXXXXXXXXXFRKLQGWSYSLKVNFEPLDI 821
BLAST of mRNA_H-paniculata_contig8301.16326.1 vs. uniprot
Match: A0A835ZA34_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA34_9STRA) HSP 1 Score: 261 bits (667), Expect = 9.230e-71 Identity = 259/853 (30.36%), Postives = 370/853 (43.38%), Query Frame = 1
Query: 499 LRLAIIGVGADE-VGVMMRGRFGSTVISMDELMKGRRGRRTETVKAKAVSNWLTEEGSADRILTGFPTTVAEAEALEKFGVKFADLVVLVPDVGCSEV---MESIMELYEGKVTKVSYEKDVATMCTSAVSLLGFDAPRSATNVEDNSAARVAAAPSFGFIHMEGEQVNRSHGAQGENTVAIDKITGAKNASADEELSAAPDERDEVTTMSPS--------EHILAKKRGTAAHDEVIQAAKRGAELKRAQKQAIR---EKKRAANEAQRLDTPFYVAVASGKPKARYHAPVPI----------VPSRITERLSSAVA------DDDTNVNTQLEFGPLVIDSPASDCLLAAGIRQPTGIQMEGMGAIADGESVILHAMTGSGKTLAFLLPLMQRWTPSLFDTKGGRSAATAVAAVNGARSDGAFRVLLALPTRELAIQVAREAVLLAGGVTAYVELLVESGVHHDLGKVTAPIVVGSAKVLERIIRKSRPTVRNDVLSRIECIVVDEVDRLVDVLPKHTPPREVEKRKKHARPIAALLGKVVEAKPDVQVVACSATIGRPLRRELTN------------IVRSAA-------ATDATVDRLNDDGTTRYD---------PRVIRDPFATSSDDDLSSERARVTAVVAHLR-----------------------RAGGNVGRNAMALHEAMGFGSGSDEXXXGGGGSVGGVRGK----------HSSEAILQHDKLTGQFRGVGRGSSPSRNPGAGENDLLLGGMGLGRLAEGETGAILVTGEDSARGLHFDDVDFVFLMHKPKNPDEYVHLAGRTGRQGKEGNVVTLVSVEEFRKMRSWSSSLKVYFENMNI 2781
+R+AIIG A++ V + ++G+ ++ ++ ++GR+T+ VKA V+ L + S +L GFP +V EAE G F LVVL G + M S++ +EG+V +V+ A + A+N NS A VA+ P +E E E ++ AA + A+ G Q AI E A N P+Y AVA K + S+I ++L+S D T+ + + FG L + ++CL+ AGI P+ IQ M IA GESV+LHA TGSGKTLAFLLPLMQR A GA +V++ +PTRELA+Q+AREAVLL GG T V+L ++ L V APIVVG+AKVL + ++K+RP+ R ++L+ + +V DEVDRLVD L K+ RE ++RK+H RPI LL + P++QV+A SAT+GRPLRREL +VR+ A + TV+ + DG D P I + +D + A V LR R+ G V NA LHEAMGF S D H+++A+ HD L + + GAGE + GG+ E +LV DSARGLHF+ VD V ++ + + PDEYVHL+GRTG VV++V+ +E + M+ W + LK E +
Sbjct: 49 VRVAIIGDCAEDGVASAVAAKYGAEACNVAAALREKKGRKTDKVKA-TVARHLADAASGGWVLVGFPNSVPEAELFASSGDNFTKLVVLRTGEGQAAATGEMASLISRFEGQVVEVNGGSAEAVLAAIG----------GASNAA-NSDAVVASQPMAPAAPVELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQVMLD--AAAALPQPPSDAEEGDAAPSPQLSAIEASMESIAALNTPAAPSIPWYAAVAKPTKKVKXXXXXXXXXXXXXXXDSAASKIVQQLASTSTGKKLNGDLGTDADASVAFGELELRGAMAECLVKAGISTPSPIQAASMSRIATGESVMLHAETGSGKTLAFLLPLMQR------------------IAATGANKP--LQVMVVVPTRELAVQIAREAVLLGGGATKGVDLFLDQQAGVTLADVKAPIVVGTAKVLAQAVKKTRPSERVELLANLSAVVCDEVDRLVDTLSKYATKREADQRKRHPRPIMPLLTALKTRHPELQVIASSATVGRPLRRELAQALGLEDFKDGPAVVRANAIAPPRSKTSTVTVEEDDADGDVPADLAHSRAVMIPATIAHRYIALYREDFEEKIAAAVTAVRALRPPPRRPLIFIPASESVNRVALRLRSSGLV--NARPLHEAMGFASAVDTDAAXXXXXXXXXXXXTEDDAPSGFAHATQALAAHDALAALY---------AETEGAGEGE---GGV--------EHAQVLVASADSARGLHFEGVDLVVILGRARGPDEYVHLSGRTGXXXXXXTVVSVVTYKEAKAMKGWEAQLKFRLEQWQV 845
BLAST of mRNA_H-paniculata_contig8301.16326.1 vs. uniprot
Match: A0A7S2Y0L3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0L3_9STRA) HSP 1 Score: 218 bits (555), Expect = 1.310e-56 Identity = 186/574 (32.40%), Postives = 266/574 (46.34%), Query Frame = 1
Query: 1267 DTPFYVAVASGKPKARYHAPVPIVPSRITERLSSAVADDDTNVNTQLEFGPLVIDSPASDCLLAAGIRQPTGIQMEGMGAIADGESVILHAMTGSGKTLAFLLPLMQRWTPSLFDTKGGRSAATAVAAVNGARSDGAFRVLLALPTRELAIQVAREAVLLAGGVTAYVELLVE-----------------SGVHHDLGKVTAPIVVGSAKVLERIIRKSRPTV--RNDVLSRIECIVVDEVDRLVDVLPKHTPPREVEKRKKHARPIAALLGKV--------VEAKPDVQVVACSATIGRPLRRELTNIVRSAA-------ATDATVDRLND-DG----------TTRYD--PRVIRDPFATSSDDDLSSER----------------------ARVTAVVAHLRRAGGNVGRNAMALHEAMGFGSGSDEXXXGGGGSVGGVRGKHSSEAILQHDKLTGQFRGVGRGSSPSRNPGAGENDLLLGGMGLGRLAEGETGAILVTGEDSARGLHFDDVDFVFLMHKPKNPDEYVHLAGRTGRQGKEGNVVTLVSVEEFRKMRSWSSSLKVYFENMNI 2781
+ P+Y+ + + P+A AP+PI+PSRI E + ++ V LEFGPL + S + L AGI P+ IQ M AI G + ++HA TGSGKTLA+LLPL+ D R ++L+ P RELA+Q+ RE V+L GG + VEL++E SG H + APIVV +A+ +E ++ S+ + + L I +V+DEVDRL+D LPK+ +E +R+ H RP + LL + A P VQ+VACSAT+GR L REL + +DA L D DG T RY P I+ + + + L + A+++ V+ L G A ALH+AMGFGSG + R A+L D + F+ + +E E +LV ED+ARGLHF++VD+VFL+ KPK PDEY+HLAGRTG VVT++S E +KM++W L V E + +
Sbjct: 187 EEPYYMRLKTKTPRAPA-APLPIIPSRIQEVDAQSLKAMREQVEP-LEFGPLTLRSSMAAALRQAGITTPSPIQANAMTAIRQGSNAVVHAETGSGKTLAYLLPLLMD-----MDWSTPR------------------QLLVVAPGRELAVQIGREMVVLLGGRSDLVELVLEGKPKTVQGGNQREKNLASG--HPALRTQAPIVVATARQMEIALKTSKKFEEHKTNFLKSIRTVVLDEVDRLIDPLPKYATLKERRQRELHPRPASTLLYNLFLSRISGEAAALPKVQLVACSATVGRQLTRELCRLTGMMPRDLPVLRGSDADSLSLGDGDGEDPEGGGAEKTLRYVNVPPSIKHFYIPTMKESLEEKMEELLVAITMLKPRAPLLFIPRDAKISGVIEELHSVGLT---EAQALHQAMGFGSGHETSN----------RRHEGKSAMLSLDHIASLFQ---------------------------KKSEDERPPLLVASEDTARGLHFNEVDYVFLLAKPKTPDEYLHLAGRTGXXXXXXXVVTVISFREVKKMKAWKKILGVELEELEL 693
BLAST of mRNA_H-paniculata_contig8301.16326.1 vs. uniprot
Match: A0A7S3A3J3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3J3_9RHOD) HSP 1 Score: 187 bits (476), Expect = 9.190e-48 Identity = 149/498 (29.92%), Postives = 233/498 (46.79%), Query Frame = 1
Query: 1381 DDTNVNTQLEFGPLVIDSPASDCLLAAGIRQPTGIQMEGMGAIADGESVILHAMTGSGKTLAFLLPLMQRWTPSLFDTKGGRSAATAVAAVNGARSDGAFRVLLALPTRELAIQVAREAVLLAGGVTAYVELLVESGVHHDLGKVTAPIVVGSAKVLERIIRKSRPTVRNDVLSRIECIVVDEVDRLVDVLPKHTPPREVEKRKKHARPIAALLGKVVEAKPDVQVVACSATIGRPLRRELTNIVRSAA---------ATDATVDRLNDDGTTRYDPR--------VIRDPFATSSDDDLSS--------------ERARVTAVVAHLRRAGGNVGRNAMALHEAMGFGSGSDEXXXGGGGSVGGVRGKHSSEAILQHDKLTGQFRGVGRGSSPSRNPGAGENDLLLGGMGLGRLAEGETGAILVTGEDSARGLHFDDVDFVFLMHKPKNPDEYVHLAGRTGRQGKEGNVVTLVSVEEFRKMRSWSSSLKVYFENMNI 2781
++ + N +EFG + IDS S+ L +R P+ IQ + +++GE+ +LH+ TGSGKT+A+LLP+++ N S+ L+ +P+REL +QV EA L + V L E + T ++VG+AK + + K + + IV DEVDRL+ + KH +K+K+H RP +A+L ++ + QV+A SAT+GRPL+REL +++ A D + + +G+ P+ VI D ++ D + + A +T V+ LR G A ALHEA GFG +G S E++ ++ KL F G G++DL ++ ILV E +ARGLH VD VFL+ P + +EY+HLAGRTGR G++G VV++ S + R M +W S LKV F++ +
Sbjct: 52 EEADENVGVEFGGIQIDSAVSEALARRNVRDPSPIQRAALARLSNGETAVLHSETGSGKTIAYLLPIIK----------------------NMLESEVKKAYLIIVPSRELGVQVYSEACALLCDESGRVSYLEELNMPR-----TGTLLVGTAKTVHALSDKFG---FKGFFNMFKVIVFDEVDRLIGTVGKHAARAVKQKKKRHTRPASAILERIARDGMECQVIAASATVGRPLKRELASLLNLPMKDGMAVIRPAQDILPEGSSGNGSRLLIPKNIEHICLPVIIDEYSEMMDALAGALVHLNPKKPLIFINKNASITKVIEELRERGF---AEATALHEAYGFG-----------------KGVTSLESMDKYGKLMSSFNG-------------GDSDL------------DQSAPILVASEAAARGLHLSHVDVVFLIDCPSDQNEYLHLAGRTGRMGEDGKVVSICSYRKARVMNTWQSQLKVTFKSFKL 474
BLAST of mRNA_H-paniculata_contig8301.16326.1 vs. uniprot
Match: A0A0G4EJG7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJG7_VITBC) HSP 1 Score: 169 bits (427), Expect = 5.400e-41 Identity = 156/478 (32.64%), Postives = 226/478 (47.28%), Query Frame = 1
Query: 1498 MGAIADGESVILHAMTGSGKTLAFLLPLMQRWTPSLFDTKGGRSAATAVAAVNGARSDGAFRVLLALPTRELAIQVAREAVLLAGGVTA-----------YVELLVESG---VHHDLGKVTAPIVVGSAKVLERIIR-KSRPTVRNDVLSRIEC---------IVVDEVDRLVDVLPKHTPPREVEKRKKHARPIAALLGKVVEA----KPDVQVVACSATIGRPLRRELTNI--VRSAAATDATVDRLNDDGTTRYD-----PRVIRDPFATSSDDDLSSERARVTAVVAHLRRAGGNVG----------------------RNAMALHEAMGFGSGSDEXXXGGGGSVGGVRGKHSSEAILQHDKLTGQFRGVGRGSSPSRNPGAGENDLLLGGMGLGRLAEGETGAILVTGEDSARGLHFDDVDFVFLMHKPKNPDEYVHLAGRTGRQGKEGNVVTLVSVEEFRKMRSWSSSLKV 2760
M I GE V+LH+ TGSGKTLAFLLPLM R L + R AA R L+ PTRELAIQ+A+E + L G +T V L+++ + L + + P VVG+A L R +R S + ++ L+R++ +++DEVDRLV L ++ R+ E RKKH RP + V+E + VQ++A SATIGRPLRREL N+ VR + R + + P I F +++ L A+V +VA LR + ++ M LHEA+GF SG + +R K S EA+ +H +L G+F+ + P A + + + + + + +LV D ARGLHF+ VD VF++ +P+ PDEY HLAGRTGRQG G V + E R + +W L +
Sbjct: 1 MDLILSGEDVLLHSETGSGKTLAFLLPLMVR---RLAQARRARGAA---------RERAPMETLVIAPTRELAIQLAQEILELEGALTGSRSNDPLQRPDLVHLVIDDENLPLERTLLRTSCPYVVGTATSLLRALRYDSTASSQHHHLARVKPHRLLQNVRHLIMDEVDRLVSPLGRYATLRDKEVRKKHPRPATVIAQAVLETSRHLRQSVQLIAASATIGRPLRRELANMMGVRDVDKGGPLLIRPFEVEEYLHSRAVGVPDTIEHFFLPLTNNTLG---AKVNGLVAALRTLKPSRPLIFLAPHHSVRSLTHFLKTQGFQDTMPLHEALGFHSGFKKKTRD-------LRVKTSQEALAKHQELKGRFK---KQDGEEAVPDAALQERIDNTV----VDKNSSPPLLVASMDGARGLHFNQVDMVFVLGRPRTPDEYQHLAGRTGRQGAGGTAVIIGDSFEVRSLLAWRKMLGI 449
BLAST of mRNA_H-paniculata_contig8301.16326.1 vs. uniprot
Match: A0A1Z5JEC7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEC7_FISSO) HSP 1 Score: 152 bits (385), Expect = 6.600e-35 Identity = 163/516 (31.59%), Postives = 234/516 (45.35%), Query Frame = 1
Query: 1360 LSSAVADDD---------TNVNTQLEFGPLVIDSPASDCLLAAGIRQPTGIQMEGMGAIADGESVILHAMTGSGKTLAFLLPLMQR-WTPSLFDTKGGRSAATAVAAVNGARSDGAFRVLLALPTRELAIQVAREAVLLAG-GVTAYV----ELLV----ESGVHHDLGKV-TAP-IVVGSAKVLERII----RKSRPTVRN----DVLSRIECIVVDEVDRLVDVLPKHTPPREVEKRKKHARPIAALLGKVVEAKPD-VQVVACSATIGRPLRRELTNIVRSA--------AATDATVDRLNDDGTTRYDPRVIRDPFATSSDDDLSSERARVTAVVAHLRRAGGNVGRNA-MALHEAMGFGSGSDEXXXGGGGSVGGVRGKH-SSEAILQHDKLTGQFRGVGRGSSPSRNPGAGENDLLLGGMGLGRLAEGET---GAILVTGEDSARGLHFDDVDFVFLMHKPKNPDEYVHLAGRTGRQGKEGNVVTLVSVEEFRKMRSWSSSLKVYFENMN 2778
L VADDD V + F L + + A D L A +P+ IQ + + GES ILHA TGSGKTLAFLLPL + WT + +F V++A PTRELA Q+A A +LA G ++ +L+ E GV D+ ++ T P + +GSAK + + + P R + L + CIV+DEVDR++ V E + +K H +P A + V VQ+VA SAT+GRPLRREL ++ A D T D D TTR I D S +V + ++ V NA + L + GFG + S+G + KH + Q+ T + G R + G+G R + ++ G +LVTGED+ RGLH D +D+V ++ +P PDEY H+AGRTGR G G V +++S + + SWS L V F ++
Sbjct: 145 LKQLVADDDILNEMPETKVVVERLINFAGLKLSTVAGDALGRAKFFKPSPIQAAAIPQLVRGESCILHAETGSGKTLAFLLPLTEYLWTQG--------------------QDRDSFAVVMA-PTRELASQIAGIAAVLAPPGTVRFISRPTDLMADGAKERGVPIDVDELGTKPRLFIGSAKTIMHSLYGDGKMPAPPTRKPEAMEFLKNVRCIVMDEVDRMLAVQKSRA---EKQYKKIHEKPAAVVCAAVTRLTLGRVQIVAASATVGRPLRRELARVLGLPPQECPPVICAGDGTGDAGQDAATTRA--VTIPDSVTNYVVPTAGSSPGQVLTAAYQVIQSLTAVKSNARILLVLSKGFGMNTQN-------SIGAL--KHFGCQPEPQNLLDTLEADGTDHMIELYREVSGAD------GVGQSRRQDDKSASSGYVLVTGEDTVRGLHLDGLDYVLVLGRPNGPDEYTHIAGRTGRAGTPGKVFSIMSESDSASLVSWSRMLGVEFHTIS 619
BLAST of mRNA_H-paniculata_contig8301.16326.1 vs. uniprot
Match: A0A7S3QIU8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QIU8_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.800e-30 Identity = 154/507 (30.37%), Postives = 234/507 (46.15%), Query Frame = 1
Query: 1378 DDDT-NVNTQLEFGPLVIDSPASDCLLAAGIRQPTGIQMEGMGAIA-DGESVILHAMTGSGKTLAFLLPLMQR-WTPSLFDTKGGRSAATAVAAVNGARSDGAFRVLLALPTRELAIQVAREAVLLAGG-----VTAYVELLVESGV--------------HHDLGKVTAPIVVGSAK-VLERIIRKSR---PTVRNDV---LSRIECIVVDEVDRLVDVLPKHTPPREVEKRKKHARPIAALLGKVVEAK-PDVQVVACSATIGRPLRRELTNIVRSAAATDATVDRLN---DDGTTR--YDPRVIRD---PFATSSDDDLSSERARVTAVVAHLRRAGGNVGRNAMALHEAMGFGSGSDEXXXGGGGSVGGVRGKHSSEAILQHDKLTGQFRGVGRGSSPSRNPGAGENDLLLGGMGLGRLA-----EGETGAILVTGEDSARGLHFDDVDFVFLMHKPKNPDEYVHLAGRTGRQGKEGNVVTLVSVEEFRKMRSWSSSLKVYFE 2769
D++T +V +F + I + A L AG PT IQ + + D ES+ILHA TGSGKTLA+LLP+ +R W + G + G R+D ++ ++L PTRELA QVA A +L+ VT LL +S H+ G+ I+VGS+K +L + S+ PT + + LS +V+DEVDRL ++ K + + KKH +P A L + Q+VA SAT+GRPLRREL ++ V R + DD TTR P+ ++ P ++ L + A T V+ A G + + ++ G ++G + KH + Q +L G G G + + G +GLG A + G +LVTGE++ RG+H D +D V ++ +PK PDEY+H+AGR V+ ++S E+ + SW L + FE
Sbjct: 158 DENTADVEPLRKFAKMQISTAAGTALARAGFELPTPIQATALPLLTRDKESLILHAETGSGKTLAYLLPITERLWREE--ENSG----------LLGERTDSSYALILT-PTRELAAQVAGIATVLSPPNSVRLVTTPTNLLRDSWADKERSEGENGGRFDHNFGGRQGTKIIVGSSKSILLSLFGDSKLHPPTSKPEAKKFLSSTTYLVLDEVDRLFNI--KTGRGKTSKFYKKHDKPAAILTSTIARTTLGQAQIVAASATVGRPLRRELARVLGLTPDECPRVVRPSGTVDDPTTRPISVPKSLKHYALPCDGTTSGSLLTAAAFATKVLP--TPASGKGRKTLFVITKSCGINLRD---------AIGAL--KHFN-VQPQPKELLGALSGDGTDQLMNNYR------RVSGSVGLGERAANVAFDENEGYLLVTGEETVRGIHLDGLDTVVVVGRPKGPDEYIHIAGRAXXXXXXXXVINVLSYEQSNSLASWEGMLGISFE 629
BLAST of mRNA_H-paniculata_contig8301.16326.1 vs. uniprot
Match: A0A0G4F0Z9_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F0Z9_9ALVE) HSP 1 Score: 139 bits (351), Expect = 8.640e-30 Identity = 177/581 (30.46%), Postives = 246/581 (42.34%), Query Frame = 1
Query: 1396 NTQLEFGPLVIDSPASDCLLAAGIRQPTGIQMEGMGAIADGESVILHAMTGSGKTLAFLLPLMQRWTPSLFDTKGGRSAATA-----------VAAVNG-----------------------ARSDGAFRVLLALPTRELAIQVAREAVLLAGGVTAYVELLVESGVHHDLGKVTAPI-----VVGSAKVLERIIRKSRPTVRNDVLSRIECIVVDEVDRLVDVLPKHTP--PREVEKRKKHARPIAALLGKVVEAKPD----VQVVACSATIGRPLRRELTNIV--RSAAATDATV---DRLNDD------GTTRYDPRV------IRDPFATSSDDDL-----------------SSERARVTAVVAHLRRAGGNVGRNAMALHEAMGFGSGSDEXXXGGGGSVGGVRGKHSSEAIL----QHDKLTGQ-FRGV-GRGS---------------------SPS----------RNPGAGENDLLLGGMGLGRLAE-----GETGA-----ILVTGEDSARGLHFDDVDFVFLMHKPKNPDEYVHLAGRTGRQGKEGNVVTLVSVEEFRKMRSWSSSLKV 2760
N +L FG + + LL GI+ PT IQ M I G + I+H+ TGSGKTLA+LLPL+ R + K G+ A V A G R+ + L+ PTRELAIQVA E L G A V L+VES D+ + + +VG+A L + SR + ++ +++ +V+DEVDRL++V P +E +K + H +P A L V+ VQ+VA SAT+ R LRR L ++V RS D + L DD GT R + +R A + D L SS R ++ H R A+ LHEA+G+ S + VR + +A L Q D Q +GV G GS SPS + G G++ LGG+G A GE G +L+ +ARGLHF +VD VF + K + EY H+AGRTGRQGK G VV+L S +E R+ WS L++
Sbjct: 193 NAKLSFGDFNLTGHTAAALLQYGIQTPTSIQAAAMPVIGQGRNAIIHSETGSGKTLAYLLPLLHRMNENEKKFKHGKKKREAERLERQQVVAEVLARGGLKASLEESYRRELRSLQDPQETEGRNKPQMQTLIITPTRELAIQVASEIRSLEGRDDA-VHLVVESE-KADVEAIAPAMERSRWMVGTAGNLMMTLTASR--MGPLLMKQLDHLVLDEVDRLIEVDSYENPRNAKEAKKARLHPKPGAVLAQAVMAGAKSRMNKVQLVAVSATVSRDLRRALASLVGNRSNWRFDPEIVEPPELRDDKEGGQMGTVRIPKDIKHFYLPLRAGDARTKIDALVSVMKSLKPVKPIVFVESSHSVRSLCMLLHERGV-----TEAVPLHEALGYVSARRKADV--------VRREREEQAFLEELGQRDSRAAQSLKGVFGMGSRVGSAEEAFEKHEILDSVFRISPSLQEVVAESAAKKSGGGKD--ALGGLGSEPSAAAVGGGGEKGTQFKPPLLIADMRAARGLHFHEVDVVFCLGKAEGMTEYKHIAGRTGRQGKAGVVVSLGSYDEMRRFLCWSKRLRI 754
BLAST of mRNA_H-paniculata_contig8301.16326.1 vs. uniprot
Match: A0A7S1EPT1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EPT1_9RHOD) HSP 1 Score: 135 bits (340), Expect = 1.930e-29 Identity = 154/539 (28.57%), Postives = 234/539 (43.41%), Query Frame = 1
Query: 1330 PIVPSRITERLSSAVADDDTNVNTQLEFGPLVIDSPASDCLLAAGIRQPTGIQMEGMGAIADGESVILHAMTGSGKTLAFLLPLMQRWTPSLFDTKGGRSAATAVAAVNGARSDGAFRVLLALPTRELAIQVAR--EAVLLAGGVTAY-VELLVESGVHHDLGKVTAPIVVGSAKVLERIIRK------SRPTVRNDVLSRIECIVVDEVDRLVDVLPKHTPPREVEKRKKH--ARPIAALLGKVVEAK-----------PDVQVVACSATIGRPLRRELTNIVRSA----------AATDATVDRLNDDGTTRYD--PRVIRDPFATSSDD--DLSSERARVTAVVAHLR------------------RAGGNVG-RNAMALHEAMGFGSGSDEXXXGGGGSVGGVRGKHSSEAILQHDKLTGQFRGVGRGSSPSRNPGAGENDLLLGGMGLGRLAEGETGAILVTGEDSARGLHFDDVDFVFLMHKPKNPDEYVHLAGRTGRQGKEGNVVTLVSVEEFRKMRSWSSSLKVYFENMNI 2781
P VP + + +A+ D + + FG L I L GI T IQ M ++ GES++++A TGSGKTLAF LPL+ L S + ++ + L+ P+RELA+Q + E +L + V +L E +V P V SA ++ R S T RND+L+++ C+V+DE DR++ K+ RE K+H +P +L + + +QVVA SAT+GRP RR L N++ + T AT D + D T+ P IR + D+ D + A + A + H + A ++G ++A+ +HEA GF SGS V GK S I ++ TG G + P+ P +LVT + RGLHFD + +VFL+ + +EY H AGRTGR G EG +V+LVS E +++RS ++LK+ + I
Sbjct: 83 PFVPRKASSLTENAL---DESSQKETLFGGLEIPDWIQSSLHEMGIESATDIQERCMESLFRGESLLINAETGSGKTLAFTLPLVLDLLRQLRLDSSNESN-------DQEQTSRHWYGLILAPSRELALQTWKTLETLLKFDKESRIRVSVLFEVSKSDSNERVELPADVASAHIVVATPRALFEQMDSSSTARNDLLTQVRCVVLDEADRMISAASKYARSREQMHAKRHLATKPAVQILDYLTDMDIRSSVFGDSRDQGLQVVAVSATMGRPFRRLLANVMHIQDMKLAPTFVRSETKATAD-IGDAIVTKSVTIPSGIRHIYLPVEDELPDFNQRSAVLHAAMMHAKVQNALVIIAENQSTASAIEALKSLGWKSAVPVHEAFGFLSGSFSRDA--------VLGKASQNKI-ENGSTTGSET-AGLNAYPANVP------------------------VLVTSFGALRGLHFDGLQWVFLLGGAPSMEEYQHAAGRTGRCGTEGTIVSLVSWSEAKQLRSTQTALKIQLQKWRI 576
BLAST of mRNA_H-paniculata_contig8301.16326.1 vs. uniprot
Match: A0A7S1GIE5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIE5_CYCTE) HSP 1 Score: 131 bits (329), Expect = 8.040e-28 Identity = 144/516 (27.91%), Postives = 219/516 (42.44%), Query Frame = 1
Query: 1408 EFGPLVIDSPASDCLLAAGIRQPTGIQMEGMGAIADGESVILHAMTGSGKTLAFLLPLMQR----WTPSLFDTKGGRSAATAVAAVNGARSDGAFRVLLALPTRELAIQVAREAVLLAG-GVTAYVEL--------------LVESGVHHDLGKVTAP-IVVGSAKVLERI-----IRKSRPTVRNDV---LSRIECIVVDEVDRLVDVLPKHTPPREVEKRKKHARPIAALLGKVVEAK-PDVQVVACSATIGRPLRRELTNIVRSAAATDATVDRLN----DDGTTRYDP---RVIRDP-----FATSSDDDLSSERARV-----------------TAVVAHLRRAGGNVGRNAMALHEAMGFGSGSDEXXXGGGGSVGGVRGKHSSEAILQHDKLTGQFRGVGRGSSPSRNPGAGENDLLLGGMGLGRLAEGETGAILVTGEDSARGLHFDDVDFVFLMHKPKNPDEYVHLAGRTGRQGKEGNVVTLVSVEEFRKMRSWSSSLKVYFENMNI 2781
+F L + + A + L A P+ IQ + A+ GES ILHA TGSGKTLA+LLP+ +R +T +D +G ++ PTRELA QVA A++LA G + L G + + P I+VGSAK + + + + PT + + L + +V+DEVDR++ + K T R E+ + H RP A + V Q++A SAT+GRPL+REL ++ V R + +T DP R + P + T+ D + SS + T ++ L RA G +N + + G K +++L + G R + + S G GE + E G +LVTGED+ RGLH D +D V + +P PDEY H+AGRTGR V T+VS + ++SW L+ F +++
Sbjct: 185 KFAGLRLSATAGEALGKANFGNPSPIQAAAVPALYRGESAILHAETGSGKTLAYLLPITERLWQEYTADDYDDRG--------------------YCVIVTPTRELAAQVAGIALVLAPPGAVRLISRPANLMKRNPRERGELPNGGFNSENEPRKDPRILVGSAKAIMQSLYGDGVMPAPPTSKPEAKHFLRNVRWMVLDEVDRVLHI--KKT--RMQERYRLHERPAAVVAAAVARLSLGKAQIIAASATVGRPLKRELCRVLGLETEQCPQVIRGGKADEQEMSTEEDPQHRRAVTIPSTVQNYVTTMDGEGSSSSGMLLTKACEVIKTLSQKKPSTKILLVLTRASGLKTQNTVGALKFFGC--------------------KPEPQSLLDALEADGTDRMIEKHRRVSGATGIGETGYFT----HKQDDEPSAGYLLVTGEDTVRGLHLDGLDVVVAVGRPHGPDEYTHIAGRTGRXXXXXRVFTVVSKDNAAALKSWERILETDFNIVDV 652 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8301.16326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8301.16326.1 >prot_H-paniculata_contig8301.16326.1 ID=prot_H-paniculata_contig8301.16326.1|Name=mRNA_H-paniculata_contig8301.16326.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=927bp VLYCTTVRSSSPTKACTKKLKFSWKHTMKITTANGVLLALPQVVGFTTNPback to top mRNA from alignment at H-paniculata_contig8301:2458..6997- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8301.16326.1 ID=mRNA_H-paniculata_contig8301.16326.1|Name=mRNA_H-paniculata_contig8301.16326.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4540bp|location=Sequence derived from alignment at H-paniculata_contig8301:2458..6997- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8301:2458..6997- >mRNA_H-paniculata_contig8301.16326.1 ID=mRNA_H-paniculata_contig8301.16326.1|Name=mRNA_H-paniculata_contig8301.16326.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5562bp|location=Sequence derived from alignment at H-paniculata_contig8301:2458..6997- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |