mRNA_H-paniculata_contig830.16323.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig830.16323.1
Unique NamemRNA_H-paniculata_contig830.16323.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig830.16323.1 vs. uniprot
Match: D7FXF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF4_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 1.270e-61
Identity = 90/122 (73.77%), Postives = 105/122 (86.07%), Query Frame = 1 
Query:  256 GAGNAVWNHPIDAHLGTESFEGWPKMLIEVWSVDECDRSELAGYGMCYIPSSPGSYDLDMVTWRPQGTLADRLSATLLGAPPHLTEVGTAASGADRFPLTTETAGTVLLHVEVLTSGFVERN 621
            G G+AVWNHPID H GT+S  GWP++L+EVWSVD CDRSELAGYGM ++P+SPG+YDLD VTWRPQGTL D+LSA LLGAPP+L EV TAASGADRF L TETAGTV+ H+EVL +GF +RN
Sbjct:   27 GEGSAVWNHPIDVHFGTDSLSGWPRVLVEVWSVDGCDRSELAGYGMIFVPTSPGTYDLDCVTWRPQGTLGDQLSAALLGAPPNLVEVTTAASGADRFELRTETAGTVVFHLEVLVAGFADRN 148
[Close]
BLAST of mRNA_H-paniculata_contig830.16323.1 vs. uniprot
Match: A0A7S1GA20_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GA20_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.910e-47
Identity = 72/177 (40.68%), Postives = 108/177 (61.02%), Query Frame = 1 
Query:  103 MPEVHVIGELAGALGFPRPKLYARYEIVLDTEHWHIMQGHEAGYTQVDETSGAGNAVWNHPIDAHLGTESFEGWPKMLIEVWSVDECDRSELAGYGMCYIPSSPGSYDLDMVTWRPQGTLADRLSATLLGAPPHLTEVGTAASGADRFPLTTETAGTVLLHVEVLTSGFVERNVRMG 633
            MPEVH++G++ GA  FP+ +L  R+ +V DT HW ++ G   G T V +      A W+HPID H    S EGWP++ +EVW  DE  R+E++GYG   +P++PG + +D++TWRP+G+  +RLSA +LG  P L +        DR  L+TET G V + +++L  GF  + V   
Sbjct:   47 MPEVHILGQVVGASEFPQTRLLCRWRVVADTSHWDLVTGENEGQTHVVDKEEEEFAAWSHPIDVHYSCSSIEGWPQLAVEVWQQDEHGRNEISGYGSVRVPTAPGVHHVDVMTWRPEGSFVERLSAAMLGGHPQLKDTDIVTESVDRVELSTETRGVVHVELQLLVKGFDVKAVEFA 223
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BLAST of mRNA_H-paniculata_contig830.16323.1 vs. uniprot
Match: UPI0018F75511 (B9 domain-containing protein 2 n=1 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F75511)

HSP 1 Score: 160 bits (404), Expect = 1.790e-45
Identity = 76/174 (43.68%), Postives = 105/174 (60.34%), Query Frame = 1 
Query:  103 MPEVHVIGELAGALGFPRPKLYARYEIVLDTEHWHIMQGHEAGYTQVDETSGAGNAVWNHPIDAHLGTESFEGWPKMLIEVWSVDECDRSELAGYGMCYIPSSPGSYDLDMVTWRPQGTLADRLSATLLGAPPHLTEVGTAASGADRFPLTTETAGTVLLHVEVLTSGFVERNV 624
            M E+HVIG++ GA GFP+  L+ ++ +      W ++ G   G TQVD       A W+HPID H  T+  +GWPK+ ++VWS D   R +LAGYG C++P+SPGS+ L+ VTWRP G+  +RL+   +G  P L       SGADR+ L T  AGTV+LH+ VL   F    V
Sbjct:    1 MAELHVIGQILGASGFPQTSLFCKWGVHTGGA-WKLLSGVREGQTQVDSPQIGDMAYWSHPIDLHFATKGLQGWPKLHLQVWSQDGFGRCQLAGYGFCHVPTSPGSHRLECVTWRPLGSWQERLAGAFVGGGPQLLHSDVVYSGADRYRLHTAAAGTVVLHLTVLPRHFARYGV 173
[Close]
BLAST of mRNA_H-paniculata_contig830.16323.1 vs. uniprot
Match: A0A6I8NI87_ORNAN (B9 domain containing 2 n=2 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8NI87_ORNAN)

HSP 1 Score: 160 bits (405), Expect = 9.730e-45
Identity = 77/178 (43.26%), Postives = 105/178 (58.99%), Query Frame = 1 
Query:   91 EPTAMPEVHVIGELAGALGFPRPKLYARYEIVLDTEHWHIMQGHEAGYTQVDETSGAGNAVWNHPIDAHLGTESFEGWPKMLIEVWSVDECDRSELAGYGMCYIPSSPGSYDLDMVTWRPQGTLADRLSATLLGAPPHLTEVGTAASGADRFPLTTETAGTVLLHVEVLTSGFVERNV 624
            E  AM E+HVIG++ GA GFP+  L+ ++ +      W ++ G   G TQVD       A W+HPID H  T+  +GWPK+ ++VWS D   R +LAGYG C++P+ PGS+ L+ VTWRP G   +RL+   +G  P L       SGADR+ L T  AGTV+LH+ VL   F    V
Sbjct:   66 ERGAMAELHVIGQIMGASGFPQTSLFCKWGVHTGGA-WKLLSGVREGQTQVDSPQIGDTAYWSHPIDLHFATKGLQGWPKLHLQVWSQDGFGRCQLAGYGFCHVPTGPGSHRLECVTWRPLGGWRERLAGAFVGGGPQLLHSDAVYSGADRYRLHTAAAGTVVLHLTVLPRHFARYGV 242
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BLAST of mRNA_H-paniculata_contig830.16323.1 vs. uniprot
Match: A0A6L5D9F5_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5D9F5_9INSE)

HSP 1 Score: 157 bits (396), Expect = 2.850e-44
Identity = 78/174 (44.83%), Postives = 103/174 (59.20%), Query Frame = 1 
Query:  103 MPEVHVIGELAGALGFPRPKLYARYEIVLDTEHWHIMQGHEAGYTQVDETSGAGNAVWNHPIDAHLGTESFEGWPKMLIEVWSVDECDRSELAGYGMCYIPSSPGSYDLDMVTWRPQGTLADRLSATLLGAPPHLTEVGTAASGADRFPLTTETAGTVLLHVEVLTSGFVERNV 624
            M EVH+IG+L GA GFP   L+ ++EI      W ++ G + G TQVD  S    A W HPID H  T+  +GWPK+ +EV+  D  +RSEL GYG C+IPSS G++ +   TWRP G+  DRL    +G  P LT     +S  DRF LTTET GTV L + V+   F +  +
Sbjct:    1 MAEVHIIGQLIGAQGFPNLNLFCKWEIKCGGG-WKVVSGLQEGQTQVDHPSFEEFAYWCHPIDIHFATKGIQGWPKVHLEVYQEDSYNRSELVGYGCCHIPSSAGTHQVTCATWRPLGSTRDRLRQYFVGGGPQLTNPDLVSSTRDRFRLTTETMGTVHLELTVILRNFTQHGI 173
[Close]
BLAST of mRNA_H-paniculata_contig830.16323.1 vs. uniprot
Match: A0A8C3C670_CAIMO (B9 domain containing 2 n=1 Tax=Cairina moschata domestica TaxID=1240228 RepID=A0A8C3C670_CAIMO)

HSP 1 Score: 155 bits (392), Expect = 1.100e-43
Identity = 78/175 (44.57%), Postives = 106/175 (60.57%), Query Frame = 1 
Query:  103 MPEVHVIGELAGALGFPRPKLYARYEIVLDTEHWHIMQGHEAGYTQVDETSGAGNAVWNHPIDAHLGTESFEGWPKMLIEVWSVDECDRSELAGYGMCYIPSSPGSYDLDMVTWRPQGTLADRLSATLLGAPPHLTEVGTAASGADRFPLTTETAGTVLLHVEVLTSGFVERNVR 627
            M E+HVIG+L GA GFP+ +L+ ++ +   +  W +++G   G TQVD+      A W HPID H  T+  +GWPK+ +EVW  D   RSEL GYG C++PS+PG + L  VTWRP+GT  +RLS   LG  P L     A + ADRF L TE AGTV L + ++   F    V+
Sbjct:    1 MAELHVIGQLVGASGFPQRRLFCKWGLHAGSA-WKLLEGLREGQTQVDDPQAGDMAYWCHPIDVHYATKGLQGWPKLHLEVWHQDSLGRSELLGYGFCHVPSTPGCHALTCVTWRPRGTWGERLSRFWLGGGPQLLAPDPAYA-ADRFRLRTEAAGTVRLQLGLILRHFERYGVQ 173
[Close]
BLAST of mRNA_H-paniculata_contig830.16323.1 vs. uniprot
Match: A0A7L0UQG4_CHOAC (B9D2 protein (Fragment) n=1 Tax=Chordeiles acutipennis TaxID=118183 RepID=A0A7L0UQG4_CHOAC)

HSP 1 Score: 155 bits (391), Expect = 1.650e-43
Identity = 78/176 (44.32%), Postives = 108/176 (61.36%), Query Frame = 1 
Query:  103 MPEVHVIGELAGALGFPRPKLYARYEIVLDTEHWHIMQGHEAGYTQVDETSGAGNAVWNHPIDAHLGTESFEGWPKMLIEVWSVDECDRSELAGYGMCYIPSSPGSYDLDMVTWRPQGTLADRLSATLLGAPPHLTEVGTAASGA-DRFPLTTETAGTVLLHVEVLTSGFVERNVR 627
            M E+HVIG+L GA GFP+ +L+ ++ +      W ++ G E+G TQVD+      A W HPID H  T+  +GWPK+ ++VW  D+  R ++ GYG C+IP++PG + L  VTWRP+GT  +RLS  L+G  P L       +GA DRF L TETAGTV L + VL   F    V+
Sbjct:    1 MAELHVIGQLVGASGFPQRRLFCKWGLHAGGA-WKLLSGLESGQTQVDDPQVDDVAYWCHPIDLHFATKGLQGWPKLHLQVWHQDDFGRRQVLGYGFCHIPATPGCHSLTCVTWRPRGTWRERLSQRLVGGGPQLRSPEAVTTGATDRFRLRTETAGTVHLQLGVLLRHFGRYGVQ 175
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BLAST of mRNA_H-paniculata_contig830.16323.1 vs. uniprot
Match: A0A1Y1IHR7_KLENI (B9 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHR7_KLENI)

HSP 1 Score: 154 bits (389), Expect = 3.300e-43
Identity = 69/175 (39.43%), Postives = 103/175 (58.86%), Query Frame = 1 
Query:  103 MPEVHVIGELAGALGFPRPKLYARYEIVLDTEHWHIMQGHEAGYTQVDETSGAGNAVWNHPIDAHLGTESFEGWPKMLIEVWSVDECDRSELAGYGMCYIPSSPGSYDLDMVTWRPQGTLADRLSATLLGAPPHLTEVGTAASGADRFPLTTETAGTVLLHVEVLTSGFVERNVR 627
            M EVH+IG++ GA GF    ++ ++ IV  + +W +++G + G TQVD      +AVW+HPID H       GWPK+  +VW  D   R+++ GYG C++P+  G +DLD VTW P+G++ +R+SA  +G  P L    T  +  DRF L T   GTV + + VL   F   N+R
Sbjct:    1 MAEVHIIGQILGAEGFKDRNVFCKWGIVAGS-NWDLLEGTDQGQTQVDHPPEGEDAVWSHPIDVHYACRGLSGWPKLYFQVWHQDIHGRNDICGYGFCHVPTEAGCFDLDCVTWLPEGSVLERISAFFIGGGPRLKVEETVYNSGDRFRLRTRAGGTVHIQISVLLKDFARHNIR 174
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BLAST of mRNA_H-paniculata_contig830.16323.1 vs. uniprot
Match: B3RKM0_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RKM0_TRIAD)

HSP 1 Score: 154 bits (388), Expect = 4.520e-43
Identity = 72/174 (41.38%), Postives = 100/174 (57.47%), Query Frame = 1 
Query:  103 MPEVHVIGELAGALGFPRPKLYARYEIVLDTEHWHIMQGHEAGYTQVDETSGAGNAVWNHPIDAHLGTESFEGWPKMLIEVWSVDECDRSELAGYGMCYIPSSPGSYDLDMVTWRPQGTLADRLSATLLGAPPHLTEVGTAASGADRFPLTTETAGTVLLHVEVLTSGFVERNV 624
            M EVH+IGE+ GA GFP   LY ++ I  +   W +++G+  G TQVD       A+W+HPID H  T+S  GWPKM  EVW  D   R EL GYG C +P+SPG++D++ VTWRP GT  D+L    +G    + +     +  DR  L TE  GT+ L + ++   F +  V
Sbjct:    1 MAEVHIIGEIIGATGFPSNNLYCKWSIHTENA-WRLLEGNHEGQTQVDNPQNEEFAIWDHPIDVHYATKSLYGWPKMYFEVWHQDRFGRHELYGYGFCNLPTSPGTHDVECVTWRPTGTFQDQLRQVFVGGGMEIKDPSAIYTSTDRCNLHTEAMGTIRLQLGIILRHFDKYGV 173
[Close]
BLAST of mRNA_H-paniculata_contig830.16323.1 vs. uniprot
Match: A0A6P8HTB9_ACTTE (B9 domain-containing protein 2-like n=3 Tax=Actiniaria TaxID=6103 RepID=A0A6P8HTB9_ACTTE)

HSP 1 Score: 153 bits (386), Expect = 9.030e-43
Identity = 69/169 (40.83%), Postives = 101/169 (59.76%), Query Frame = 1 
Query:  103 MPEVHVIGELAGALGFPRPKLYARYEIVLDTEHWHIMQGHEAGYTQVDETSGAGNAVWNHPIDAHLGTESFEGWPKMLIEVWSVDECDRSELAGYGMCYIPSSPGSYDLDMVTWRPQGTLADRLSATLLGAPPHLTEVGTAASGADRFPLTTETAGTVLLHVEVLTSGF 609
            M E+HVIGE+ GA GFP   LY ++ + ++   W ++ GH+ G TQVD       AVW HP+D H  T+  +GWPK   +VW  D   R+E+ GYG C++P+SPG++ +D VTWRP G+  +++    +G  P L       SG+DR+ L TE  GTV L + ++   F
Sbjct:    1 MAELHVIGEIIGASGFPSHNLYCKWSVHVEGS-WKLIAGHKEGQTQVDNPQNEEKAVWCHPVDLHFATKGLKGWPKFHFQVWHQDMYGRNEIYGYGYCHVPTSPGTHMVDCVTWRPSGSWREQMRTFFVGGAPQLKSSDIIYSGSDRYRLKTEAMGTVHLQLGIVARNF 168
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig830.16323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXF4_ECTSI1.270e-6173.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1GA20_9STRA1.910e-4740.68Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
UPI0018F755111.790e-4543.68B9 domain-containing protein 2 n=1 Tax=Tachyglossu... [more]
A0A6I8NI87_ORNAN9.730e-4543.26B9 domain containing 2 n=2 Tax=Ornithorhynchus ana... [more]
A0A6L5D9F5_9INSE2.850e-4444.83Uncharacterized protein n=1 Tax=Ephemera danica Ta... [more]
A0A8C3C670_CAIMO1.100e-4344.57B9 domain containing 2 n=1 Tax=Cairina moschata do... [more]
A0A7L0UQG4_CHOAC1.650e-4344.32B9D2 protein (Fragment) n=1 Tax=Chordeiles acutipe... [more]
A0A1Y1IHR7_KLENI3.300e-4339.43B9 domain-containing protein n=1 Tax=Klebsormidium... [more]
B3RKM0_TRIAD4.520e-4341.38Uncharacterized protein n=2 Tax=Trichoplax TaxID=1... [more]
A0A6P8HTB9_ACTTE9.030e-4340.83B9 domain-containing protein 2-like n=3 Tax=Actini... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig830contigH-paniculata_contig830:17201..20633 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score203.0
Seed ortholog evalue1.2e-49
Seed eggNOG ortholog2880.D7FXF4
Preferred nameB9D2
KEGG koko:K16745,ko:K19382
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0001578,GO:0001736,GO:0001738,GO:0002009,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007163,GO:0007164,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007288,GO:0007568,GO:0007610,GO:0008092,GO:0008104,GO:0008150,GO:0008340,GO:0008589,GO:0009653,GO:0009888,GO:0009966,GO:0009987,GO:0010259,GO:0010646,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0016020,GO:0016043,GO:0019953,GO:0022406,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0030030,GO:0030031,GO:0030154,GO:0030317,GO:0030425,GO:0030537,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0035082,GO:0035177,GO:0035869,GO:0036038,GO:0036064,GO:0036372,GO:0036477,GO:0040011,GO:0042886,GO:0042995,GO:0043005,GO:0043015,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044292,GO:0044421,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045184,GO:0048232,GO:0048468,GO:0048515,GO:0048583,GO:0048609,GO:0048729,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050794,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051674,GO:0051704,GO:0060271,GO:0060429,GO:0060756,GO:0061512,GO:0065007,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0097447,GO:0097458,GO:0097711,GO:0097722,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140056,GO:1904491,GO:1905349,GO:1905515
EggNOG free text desc.cilium assembly
EggNOG OGsKOG4028@1,KOG4028@2759
Ec32 ortholog descriptionB9 domain
Ec32 orthologEc-07_003000.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons6
Model size823
Cds size558
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig830.16323.1prot_H-paniculata_contig830.16323.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig830 17364..20531 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931042.5105882-UTR-H-paniculata_contig830:17200..173631622931042.5105882-UTR-H-paniculata_contig830:17200..17363Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig830 17201..17363 -
1691481563.2481792-UTR-H-paniculata_contig830:17200..173631691481563.2481792-UTR-H-paniculata_contig830:17200..17363Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig830 17201..17363 -
1622931042.6416428-UTR-H-paniculata_contig830:20531..206331622931042.6416428-UTR-H-paniculata_contig830:20531..20633Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig830 20532..20633 -
1691481563.3310573-UTR-H-paniculata_contig830:20531..206331691481563.3310573-UTR-H-paniculata_contig830:20531..20633Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig830 20532..20633 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931042.528086-CDS-H-paniculata_contig830:17363..175451622931042.528086-CDS-H-paniculata_contig830:17363..17545Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig830 17364..17545 -
1691481563.2674797-CDS-H-paniculata_contig830:17363..175451691481563.2674797-CDS-H-paniculata_contig830:17363..17545Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig830 17364..17545 -
1622931042.5464272-CDS-H-paniculata_contig830:18111..182101622931042.5464272-CDS-H-paniculata_contig830:18111..18210Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig830 18112..18210 -
1691481563.2793198-CDS-H-paniculata_contig830:18111..182101691481563.2793198-CDS-H-paniculata_contig830:18111..18210Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig830 18112..18210 -
1622931042.5638506-CDS-H-paniculata_contig830:18945..189821622931042.5638506-CDS-H-paniculata_contig830:18945..18982Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig830 18946..18982 -
1691481563.2887769-CDS-H-paniculata_contig830:18945..189821691481563.2887769-CDS-H-paniculata_contig830:18945..18982Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig830 18946..18982 -
1622931042.5820189-CDS-H-paniculata_contig830:19556..196431622931042.5820189-CDS-H-paniculata_contig830:19556..19643Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig830 19557..19643 -
1691481563.2991657-CDS-H-paniculata_contig830:19556..196431691481563.2991657-CDS-H-paniculata_contig830:19556..19643Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig830 19557..19643 -
1622931042.6124012-CDS-H-paniculata_contig830:19791..199341622931042.6124012-CDS-H-paniculata_contig830:19791..19934Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig830 19792..19934 -
1691481563.3097196-CDS-H-paniculata_contig830:19791..199341691481563.3097196-CDS-H-paniculata_contig830:19791..19934Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig830 19792..19934 -
1622931042.6262584-CDS-H-paniculata_contig830:20521..205311622931042.6262584-CDS-H-paniculata_contig830:20521..20531Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig830 20522..20531 -
1691481563.3202739-CDS-H-paniculata_contig830:20521..205311691481563.3202739-CDS-H-paniculata_contig830:20521..20531Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig830 20522..20531 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig830.16323.1

>prot_H-paniculata_contig830.16323.1 ID=prot_H-paniculata_contig830.16323.1|Name=mRNA_H-paniculata_contig830.16323.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=186bp
MPEVHVIGELAGALGFPRPKLYARYEIVLDTEHWHIMQGHEAGYTQVDET
SGAGNAVWNHPIDAHLGTESFEGWPKMLIEVWSVDECDRSELAGYGMCYI
PSSPGSYDLDMVTWRPQGTLADRLSATLLGAPPHLTEVGTAASGADRFPL
TTETAGTVLLHVEVLTSGFVERNVRMGTPRAVTCL*
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mRNA from alignment at H-paniculata_contig830:17201..20633-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig830.16323.1 ID=mRNA_H-paniculata_contig830.16323.1|Name=mRNA_H-paniculata_contig830.16323.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3433bp|location=Sequence derived from alignment at H-paniculata_contig830:17201..20633- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GATCAGATATATCTTGACCCTTGTGATCTTGTTCCAGCGTGCACATCAGT
CTCGTGGTGCATTACTTTCAGCACCCTCTACTGTGTAAGGGAACCAACAG
CGATGCCTGAAGGTGGGTGTATGCAGAAAGCTAGAGACGTGGTAGACTAC
TGGTGGGGTATCAGAGAGATGTTCCTGTAGCTGCACATGATGTCCATCCA
GAGGTTCTTGGCCTGCCTTCGGTGTACTGTTTAGCGCCTATCGCTGCCAT
ACCGAAAAGGGCTCGATGCAAGTCGACTCCAAATCGATTTTTCGTTCTTC
TTGGGATTACCTCCTTTCTACACCATGCCCGGATTTTTCACTCTTTGATG
CGTCTCCGATGGTGCACAATATTGTACAAGATCCTAGTCCGGTAGACGTG
CATCTGTTGCTATTTATCAACATGCTCACCAACCAGACCGCATGTTGTGA
GCTGATATAGCCGAGACGATACTGCGTACCTCAGCCAGGCTACACTCCCA
GGGTTTGATGTGCGGCTTCGTATCATCAATGTACAAGACCTGACAGTATA
CTGTCGTAACATGTAAGTCTACAGTGCCTGCAACGGCATGTGCAGGAGAG
AGCGATTCTTACTTTTCAACAGTGTACGGACAGAGAATCCAATGTCATCT
ATTCCTCGGCACTCCCTACATCCCTTATGTGGGCTGTATTACTCCGCAGT
ACATGTGATCGGGGAATTGGCTGGAGCGCTAGGATTTCCAAGACCTAAAC
TATACGCTCGCTACGAAATTGTGTTGGATACTGAGCACTGGCATATCATG
CAGGGCCATGAGGCGGGGTACACACAGGTTGACGAAACATCGGTAAGTGG
GGGGGGGGGGTGTCAACCTTCAAGCGTTATCACAGATGGGCCGTAGCGAG
TACAAGTAGCACACCGAGACGCGCCAGTGAAGTTATTCGATAGCTGACTC
TACTCCCTGGAGGTAACGAGTGCTGTGCTGAACTTCACAGGGTGCTGGCA
ACGCGGTCTGGAATCATCCAATCGATGCACACTTGGGCACAGAGTCTTTT
GAAGGTTGGCCCAAGATGCTGATCGAGGTGCGTTTGAATGAATGAGACGG
TGGAAAAAGTAGGGCTGCCCAGCACGAAAATATGTATTTGTTGCAAATAT
TGTTTCTATATTGTGTCCGTTGTTAATGTTATAAAATGGTTGCCAATGCT
TGGCGTGTTGTATACAGTTTGACCAAGGTATTAGCGACGTCAAAGCCCTT
GTACAAACTTCCATACCCTGACACCGAAAATGTTGGGAGTTGTACTTTTT
GTCCCTATGTCCCTCAAAGTATCCACCGTGGTGACTACCTGTGCACGATC
CTGCCGCCAGTACATGCTGAACCTGTGACGCAACGAATTATTCTCATTGC
CACATCGTAGTTTTTTTGGTGTGTAAAAGTCGAGATCTTGATAACCACGG
CAATAATTTTCTCGCTCACTATTACCCAAACCGCGGTACGCAGAGTGACT
AATTCTTGGGCCGTTGCCTGGGATCCTTTTAGCTTACGAAACTACTCTTT
TCATATAATGAGCCCTGACCATCAGTGTTAACGCTTAGGGTCAATTGTAG
GTTTGTTAATGAGTTATATCAAAGTCTCTATTTTTGCCATAACGTTGTCA
GGTTTGGAGCGTTGACGAATGCGACAGGAGTGAACTAGGTGAGCTCGAGT
GGAAGGCTAGCATCGTGTGTGGGCAGTATCCTCGCCGTTTAAATTTTGCA
TACCCATACTCCGTTTACCGTACTGGTGGGTAGTACTCCAAGGCACAAAG
TACTTCACGCATACAAAAAGCCCTACAAAATGTCCGGGAAATGACAGTAA
TAGTCGTGCAACGATCGAAGAGAGACAAAGTGGGCCAATTGTTGGGCGTA
TTTCACGAAACACATCCCCGGAATTCTTCTTCGTATTATTTCCTGTGTTC
GTTGTATCAGCGTCATTATCTAGTATAATATCTGACAAAGTGTTGTCTAC
AATGTTGGATAGGGTGAAGTATGCAACAGTGTTCCTGGTGGCGGGATTAA
GTTTCTCCTCCGATGGGGAATTTTGCCGGGTCCAAGACCCTTTCCCTTCC
CCAATCGTTGTACTTCTTCATGTTAATCTCGAGAATAGGCTAAACAAAAG
CCAAAACTAGATGCAAAGCAAAAACGTCTTACTCCACTTCAGCAGCAACG
TGAAGAAGCATATACCAGACTTCGTGTAACTTTCAATTCTTAATACACGT
TCCCCTAAGTAGGTTGGCTCGCGGACTCTCAAGGCAGTTGTCGCCAACGC
GGGAGGCCATAAAAAGCATTCTTGAGTTCCACACCTGCGCCAATCCGTCA
CACTCGTTCATTTTGTATGTAGAACGTGACAGCTATCAACCCTCTGTACC
CACCGCCTTTCCCCCTTTCTCAGCTGGGTATGGCATGTGTTATATCCCCT
CGTCGCCGGGAAGCTATGACCTTGACATGGTCACATGGCGACCACAGGGG
ACTCTAGCGGATCGACTCTCGGGTGAGAGCATGCACATACACGATGGTGA
TGAACATTGCCGAAATTCACCATTAAAACCCAAGGTCGGTACGTGGACTT
ATTTATTGCTGTTCACGTTTAACTCATGCGCATAGCACTTTCGTTGAAAC
CGCAGACCTAACCATCTGTGTGGCCATTCCGTTGATGCATCATAAGACCT
GTTCCTGAGTTGATAGAGTACGGACAATCATCATGTTTAAAGCAACAGAC
CGATCGTGTTATGTGGGAGCAGATATCTTGCCTTTTTTATCACGATACTG
TGCTTACGGTTGGACTTATTTTTGGAACGCCCACTGGTAAAGCGAGTGCC
ACTCTCGACACGTAAAGCGCAGAAATATTCAAACAGAATATGTGAATTCA
GACGTACTTACAGCTCCGATATCCAGGTAAGTTCATTAAAACGTACTAAT
AATCGTATATGTAAATGTATCATCAGACTTGAACTGAATGGCGGTACTTT
ATTTTTCCAGACTCACTGAAAACAAGAGGTTTCCAAGTCGACTCTAGAAC
AATAGCAACCCTTGATCCCGGTTTCTCGATCTCAACAGCCACGCTACTCG
GAGCTCCGCCGCACCTAACAGAAGTAGGAACTGCCGCGTCCGGAGCGGAC
CGGTTCCCTCTAACAACGGAGACAGCGGGTACGGTGCTATTGCACGTGGA
AGTGTTGACGTCAGGGTTTGTGGAGCGGAACGTGCGGATGGGGACTCCTA
GGGCAGTCACATGCTTGTAGCAGCAGTGATACGCTTTACTGTACAGTTCC
AAAGCACATTTTCGTGCTGCACGGAATATAGGTCTCCTATTACGGTTGCC
AATATACAGAGCTGGTAAAAATTGCGGATAACTCTAGAGTTATGAGTCAT
TTTAACTGACAGGGCGTCACTAATATGACAGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig830:17201..20633-

>mRNA_H-paniculata_contig830.16323.1 ID=mRNA_H-paniculata_contig830.16323.1|Name=mRNA_H-paniculata_contig830.16323.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1116bp|location=Sequence derived from alignment at H-paniculata_contig830:17201..20633- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTGAAGATGCCTGAAGTACATGTGATCGGGGAATTGGCTGGAGCGC
TAGGATTTCCAAGACCTAAACTATACGCTCGCTACGAAATTGTGTTGGAT
ACTGAGCACTGGCATATCATGCAGGGCCATGAGGCGGGGTACACACAGGT
TGACGAAACATCGTACATGTGATCGGGGAATTGGCTGGAGCGCTAGGATT
TCCAAGACCTAAACTATACGCTCGCTACGAAATTGTGTTGGATACTGAGC
ACTGGCATATCATGCAGGGCCATGAGGCGGGGTACACACAGGTTGACGAA
ACATCGGGTGCTGGCAACGCGGTCTGGAATCATCCAATCGATGCACACTT
GGGCACAGAGTCTTTTGAAGGTTGGCCCAAGATGCTGATCGAGGGTGCTG
GCAACGCGGTCTGGAATCATCCAATCGATGCACACTTGGGCACAGAGTCT
TTTGAAGGTTGGCCCAAGATGCTGATCGAGGTTTGGAGCGTTGACGAATG
CGACAGGAGTGAACTAGGTTTGGAGCGTTGACGAATGCGACAGGAGTGAA
CTAGCTGGGTATGGCATGTGTTATATCCCCTCGTCGCCGGGAAGCTATGA
CCTTGACATGGTCACATGGCGACCACAGGGGACTCTAGCGGATCGACTCT
CGGCTGGGTATGGCATGTGTTATATCCCCTCGTCGCCGGGAAGCTATGAC
CTTGACATGGTCACATGGCGACCACAGGGGACTCTAGCGGATCGACTCTC
GGCCACGCTACTCGGAGCTCCGCCGCACCTAACAGAAGTAGGAACTGCCG
CGTCCGGAGCGGACCGGTTCCCTCTAACAACGGAGACAGCGGGTACGGTG
CTATTGCACGTGGAAGTGTTGACGTCAGGGTTTGTGGAGCGGAACGTGCG
GATGGGGACTCCTAGGGCAGTCACATGCTTGTAGCCACGCTACTCGGAGC
TCCGCCGCACCTAACAGAAGTAGGAACTGCCGCGTCCGGAGCGGACCGGT
TCCCTCTAACAACGGAGACAGCGGGTACGGTGCTATTGCACGTGGAAGTG
TTGACGTCAGGGTTTGTGGAGCGGAACGTGCGGATGGGGACTCCTAGGGC
AGTCACATGCTTGTAG
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