mRNA_H-paniculata_contig8298.16318.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8298.16318.1 vs. uniprot
Match: A0A7S2SMD1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMD1_9STRA) HSP 1 Score: 100 bits (249), Expect = 4.850e-20 Identity = 55/155 (35.48%), Postives = 82/155 (52.90%), Query Frame = 1
Query: 505 PVLKGVDLVGYWFLDEGEPAVMGSEDFTSTYSGYLFYFSSAKNQELFEANPAQYMPAYGGFCSWAVAMEDG-------WEAYNLGPGPDLDLWSISEDIDNMLHLFRGKSPQAKFNDKYRAMVKKAEYRWNSWFGTFAVGADGAGAPLDTFCFRN 948
PVL+GVD+V Y+FL++G AV GS TS Y GY ++FSS +N+E F+ +P Y P +GGFC++A++ D + Y+ PD L + L+LFRG + F + + E +W SWFG+ G ++T CF
Sbjct: 71 PVLEGVDVVEYFFLEDGRSAVYGSSSVTSVYDGYTYWFSSVENKEKFDQDPDTYSPQFGGFCAFALSGNDPRNSLRRVQQLYSAPVDPDQYLI-----LSGKLYLFRGSEAKYLFLENADVGIVGGEVKWESWFGSACHGF------MNTMCFME 214
BLAST of mRNA_H-paniculata_contig8298.16318.1 vs. uniprot
Match: A0A6C0KGL2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KGL2_9ZZZZ) HSP 1 Score: 88.2 bits (217), Expect = 4.970e-16 Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = 1
Query: 496 SSLPVLKGVDLVGYWFLDE--GEPAVMGSEDFTSTYSGYLFYFSSAKNQELFEANPAQYMPAYGGFCSWAVA----MEDGWEAYNLGPGPDLDLWSISEDIDNMLHLFRGKSPQAKFNDKYRAMVKKAEYRWNSWFGT 891
S PVL G+D++ Y++ D GE G+++ S Y+G+ + F++ +N+ +F++NP QY+P YGG+C+W VA E W LGP + W + + L+ F + KF ++ + RW+SWF T
Sbjct: 50 SDHPVLGGLDIIPYFYNDSYRGE---RGNDNIVSEYNGFNYLFTNIENKNMFDSNPEQYLPQYGGYCAWGVAGEYCPEYPWSVDCLGPSGN---WKHGKVLSQKLYFFLYEEAMEKFMANVDDNIEAGDERWSSWFST 181
BLAST of mRNA_H-paniculata_contig8298.16318.1 vs. uniprot
Match: A0A6C0LQ37_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LQ37_9ZZZZ) HSP 1 Score: 86.7 bits (213), Expect = 1.820e-15 Identity = 44/136 (32.35%), Postives = 75/136 (55.15%), Query Frame = 1
Query: 496 SSLPVLKGVDLVGYWFLDEGEPAVMGSEDFTSTYSGYLFYFSSAKNQELFEANPAQYMPAYGGFCSWAVA----MEDGWEAYNLGPGPDLDLWSISEDIDNMLHLFRGKSPQAKFNDKYRAMVKKAEYRWNSWFGT 891
S PVL G+D++ Y++ D + G+++ STY+G+ + F++ +++ +F+ANP QY+P YGG+C+W VA E W LGP + W+ + L+ F + + KF ++ + RW SWF T
Sbjct: 50 SDHPVLGGLDIIPYFYNDSYK-GTRGNDNIVSTYNGFNYLFTTNEHKIIFDANPEQYLPQYGGYCAWGVAGEYCPEYPWSVDCLGPSGN---WNHGTVLSQKLYFFLYEEAKDKFVANVDDNIEAGDERWLSWFST 181
BLAST of mRNA_H-paniculata_contig8298.16318.1 vs. uniprot
Match: A0A6C0HBZ6_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HBZ6_9ZZZZ) HSP 1 Score: 85.1 bits (209), Expect = 5.520e-15 Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = 1
Query: 508 VLKGVDLVGYWFLDEGEPAVMGSEDFTSTYSGYLFYFSSAKNQELFEANPAQYMPAYGGFCSWAVA----MEDGWEAYNLGPGPDLDLWSISEDIDNMLHLFRGKSPQAKFNDKYRAMVKKAEYRWNSWFGT 891
VL G+D++ Y F +E GS+ STY+G+ + F++ +N+ +F+ANP QY P YGG+C+W VA E W LGP + W + L+ F + + KF ++ + RW +WF T
Sbjct: 52 VLGGLDVIPY-FYNETYKGERGSDTIYSTYNGFNYLFTTVENKAMFDANPEQYQPQYGGYCAWGVAGEFCPEYPWSVECLGPSGN---WQHGTILSEKLYFFLYEEAKEKFMANTEYNIESGDERWLNWFST 179
BLAST of mRNA_H-paniculata_contig8298.16318.1 vs. uniprot
Match: A0A7S3YD23_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD23_HETAK) HSP 1 Score: 87.8 bits (216), Expect = 9.100e-15 Identity = 56/164 (34.15%), Postives = 87/164 (53.05%), Query Frame = 1
Query: 484 CTGNSSLPVLKGVDLVGYWFLDEGEPAVMGSEDFTSTY----SGYLFYFSSAKNQELFEANPAQYMPAYGGFCSWAVAMEDGWEAYN----LGPGPDLDLWSISEDIDNMLHLFRGKSPQAKFNDKYRAMVKKAEYRWNSWF-GTFAVGADGAGAPLDTFCFRN 948
C + PVL GVD+V +F + G +G ++F +T Y F F+SA+N+++FEA P +Y PAYGGF S +++E+ ++ + LGP DL W++ ED L F G++P+ F D+ A V + + W +F G G +T CFR
Sbjct: 93 CCSDPQYPVLGGVDVVSLFFQNPGSLPQLGKDEFHATLPTSTGEYTFLFASAENRDVFEAAPWKYAPAYGGFDSCGISLEERSQSADNRAELGPPVDLSKWAVVED---RLFFFGGQNPRQHFLDEVAA-VAQGDANWQLYFEGGLQDGI------FNTNCFRR 246
BLAST of mRNA_H-paniculata_contig8298.16318.1 vs. uniprot
Match: A0A6C0KM36_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KM36_9ZZZZ) HSP 1 Score: 80.9 bits (198), Expect = 2.310e-13 Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 1
Query: 496 SSLPVLKGVDLVGYWFLDEGEPAVMGSEDFTSTYSGYLFYFSSAKNQELFEANPAQYMPAYGGFCSWAVAMED----GWEAYNLGPGPDLDLWSISEDIDNMLHLFRGKSPQAKFNDKYRAMVKKAEYRWNSWFGTF 894
SS PVL G+D++ Y F ++ G + ++ Y+G+ + FS+ ++ +F+ NP QY+P YGG+C+W +A E W LGP + W + + L+ F + + KF V+ + RW SWF F
Sbjct: 65 SSHPVLGGLDVIPY-FYNDSYVGQRGLDTISTLYNGFTYLFSNDDHKAMFDENPEQYIPQYGGYCAWGIAGEYCPTYPWSDSCLGPSGN---WEHGTVLSDKLYFFLYEEAKEKFMANVIYNVEAGDERWLSWFSDF 197
BLAST of mRNA_H-paniculata_contig8298.16318.1 vs. uniprot
Match: UPI0015A41948 (YHS domain-containing protein n=1 Tax=Parasphingopyxis algicola TaxID=2026624 RepID=UPI0015A41948) HSP 1 Score: 77.4 bits (189), Expect = 1.800e-12 Identity = 53/150 (35.33%), Postives = 77/150 (51.33%), Query Frame = 1
Query: 481 VCTGNSSLPVLKGVDLVGYWFLDEGEPAVMGSEDFTSTYSGYLFYFSSAKNQELFEANPAQYMPAYGGFCSWAVAMEDGWEAYNLGPGPDLDLWSISEDIDNMLHLFRGKSPQAKFNDKYRAMVKKAEYRWNSWFGTFAVGADGAGAPLD 930
V TG+ L G D V Y F +G P G+E+F Y+G ++F+S N E F+A+PA+Y PAYGGFC+WA A D L PG D +++ I +D L+L + Q ++ ++ A+ + FA A GA LD
Sbjct: 44 VYTGSGRNIALSGYDAVSY-FTGDGTPQP-GNEEFAVVYNGVQYHFASQANAETFQADPARYAPAYGGFCAWATARGD------LAPG-DPEVYRI---VDGQLYLNFNGAVQQRWEADIPGFIESADEN----YPRFAADAQ-EGASLD 176
BLAST of mRNA_H-paniculata_contig8298.16318.1 vs. uniprot
Match: A0A840SBE7_9BURK (YHS domain-containing protein n=1 Tax=Inhella inkyongensis TaxID=392593 RepID=A0A840SBE7_9BURK) HSP 1 Score: 75.5 bits (184), Expect = 6.420e-12 Identity = 44/121 (36.36%), Postives = 65/121 (53.72%), Query Frame = 1
Query: 511 LKGVDLVGYWFLDEGEPAVMGSEDFTSTYSGYLFYFSSAKNQELFEANPAQYMPAYGGFCSWAVAMEDGWEAYNLGPGPDLDLWSISEDIDNMLHLFRGKSPQAKFNDKYRAMVKKAEYRW 873
++G D+V Y G P GS DF + + G ++FSSA N+++F ANPA+Y+PA+GGFC+ VA+E + D W + +D LHL K Q K+ + VK A+ W
Sbjct: 48 VQGYDVVAYH--TAGAPT-KGSADFMAKHEGATYHFSSAANRDMFTANPAKYVPAFGGFCAMGVALEKKLDG-------DPTAWKL---VDGKLHLNVNKDVQKKWLEDVPGNVKNAQMTW 155
BLAST of mRNA_H-paniculata_contig8298.16318.1 vs. uniprot
Match: UPI0016279D42 (hypothetical protein n=1 Tax=Teredinibacter franksiae TaxID=2761453 RepID=UPI0016279D42) HSP 1 Score: 74.7 bits (182), Expect = 9.300e-12 Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 1
Query: 493 NSSLPVLKGVDLVGYWFLDEGEPAVMGSEDFTSTYSGYLFYFSSAKNQELFEANPAQYMPAYGGFCSWAVAMEDGWEAYNLGPGPDLDLWSISEDIDNMLHLFRGKSPQAKFNDKYRAMVKKAEYRW 873
+ S +KGVD+V Y+ L EG+ AV+G+++F+ + G + FSS +N+ F ANP Y P YGG+C+++VA + PD W I +D L+L + ++ +K+A+ W
Sbjct: 25 HKSKGAIKGVDVVAYFGLKEGDKAVLGADEFSYLWQGATWKFSSEENKNTFMANPEAYAPQYGGYCAFSVA-----HGFTTSIRPDS--WKI---VDGKLYLNYSRISYLRWRLDSEDKIKEADANW 141
BLAST of mRNA_H-paniculata_contig8298.16318.1 vs. uniprot
Match: A0A1D2X7A2_9GAMM (YHS domain protein n=1 Tax=Endozoicomonas sp. (ex Bugula neritina AB1) TaxID=1868284 RepID=A0A1D2X7A2_9GAMM) HSP 1 Score: 74.3 bits (181), Expect = 1.010e-11 Identity = 45/132 (34.09%), Postives = 68/132 (51.52%), Query Frame = 1
Query: 478 YVCTGNSSLPVLKGVDLVGYWFLDEGEPAVMGSEDFTSTYSGYLFYFSSAKNQELFEANPAQYMPAYGGFCSWAVAMEDGWEAYNLGPGPDLDLWSISEDIDNMLHLFRGKSPQAKFNDKYRAMVKKAEYRW 873
++ TG S + G D V Y+ + AV GS F Y G +YF A++ LF+ +P +YMP YGGFC+WAVA++ PG D + W I +D L+L S Q + + + +K+A+ W
Sbjct: 24 HIYTGWFSNKAVSGYDTVAYFTENR---AVKGSPSFKYEYKGVEWYFVKAEHLALFKVSPEKYMPQYGGFCAWAVAVKK-----QRAPG-DPNYWKI---VDGKLYLNYDSSIQKLWMEDIQGFIKQADKNW 143 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8298.16318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8298.16318.1 >prot_H-paniculata_contig8298.16318.1 ID=prot_H-paniculata_contig8298.16318.1|Name=mRNA_H-paniculata_contig8298.16318.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=260bp MEHNAADDARPEYYQTFSRDMLLHPAKTRQQHGRNQRVWLSSILAAIGLLback to top mRNA from alignment at H-paniculata_contig8298:1833..9459+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8298.16318.1 ID=mRNA_H-paniculata_contig8298.16318.1|Name=mRNA_H-paniculata_contig8298.16318.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7627bp|location=Sequence derived from alignment at H-paniculata_contig8298:1833..9459+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8298:1833..9459+ >mRNA_H-paniculata_contig8298.16318.1 ID=mRNA_H-paniculata_contig8298.16318.1|Name=mRNA_H-paniculata_contig8298.16318.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1560bp|location=Sequence derived from alignment at H-paniculata_contig8298:1833..9459+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |