mRNA_H-paniculata_contig8292.16313.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig8292.16313.1 vs. uniprot
Match: A0A804I5G0_MUSAM (Protein-serine/threonine phosphatase n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804I5G0_MUSAM) HSP 1 Score: 64.3 bits (155), Expect = 1.740e-9 Identity = 47/137 (34.31%), Postives = 65/137 (47.45%), Query Frame = 2
Query: 83 TARGDGGVCFLPPL--------PRVMREALLDGFCRTEKAFNEFADTHKDNS-GSTAVVAMVCDSWVVIANVGDSSGLFYNENAWVARNGERSVQTKAHNINNPDEKSRVEAAGGT---FENGRLFNKLQPTRTFGN 457
TA G GG + P + R AL GF R + E A K GSTAVVA+V + W+V+AN GDS + ++R G + H + PDE RVEA GG ++ R+ L +R+FG+
Sbjct: 14 TAAGAGGYAYFAVYDGHGGAMGPEMWRRALEAGFARVDAEVMEAARAMKKGMVGSTAVVAVVAEKWIVVANCGDSRAV-------LSRGGVAVPLSIDHKPDRPDELRRVEALGGRILCWDCPRVLGVLSTSRSFGD 143
BLAST of mRNA_H-paniculata_contig8292.16313.1 vs. uniprot
Match: A0A4V6T3Z8_MUSBA (Protein-serine/threonine phosphatase n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4V6T3Z8_MUSBA) HSP 1 Score: 65.1 bits (157), Expect = 2.210e-9 Identity = 45/139 (32.37%), Postives = 66/139 (47.48%), Query Frame = 2
Query: 53 IGQRCWKGNPTARGDGGVCFLPPLPRVMREALLDGFCRTEKAFNEFADTHKDNS-GSTAVVAMVCDSWVVIANVGDSSGLFYNENAWVARNGERSVQTKAHNINNPDEKSRVEAAGGT---FENGRLFNKLQPTRTFGN 457
+ + W+ G+G P + R AL GF R + E A K GSTAVVA+V + W+V+AN GDS + ++R G + H + PDE RVEA GG ++ R+ L +R+FG+
Sbjct: 184 VAEEVWRRRAAGEGEG--------PEMWRRALEAGFARVDAEVMEAARAMKKGMVGSTAVVAVVAEKWIVVANCGDSRAV-------LSRGGVAVPLSVDHKPDRPDELRRVEALGGRILCWDCPRVLGVLSTSRSFGD 307
BLAST of mRNA_H-paniculata_contig8292.16313.1 vs. uniprot
Match: A0A835V149_VANPL (Protein-serine/threonine phosphatase n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835V149_VANPL) HSP 1 Score: 63.9 bits (154), Expect = 5.460e-9 Identity = 38/122 (31.15%), Postives = 65/122 (53.28%), Query Frame = 2
Query: 128 RVMREALLDGFCRTEKAFNEFADTHKDNSGSTAVVAMVCDSWVVIANVGDSS-----GLFYNENAWVARNG--ERSVQTKAHNINNPDEKSRVEAAGGTFENGRLFNKLQPTRTFGNRDVRR 472
+ + A+L+GF RT+++ + + G+TAV V V IAN+GD+ G+ + A N + V T+ H P E++R++ AGGT NGRL +++ +R FG+R ++
Sbjct: 178 KAAKRAILEGFQRTDESLLQESMQGNWQDGATAVCVWVLQQMVFIANIGDAKAILARGVTSDGTQTSANNAGIKAIVLTREHKAIYPQERTRIQKAGGTITNGRLQGRIEVSRAFGDRHFKK 299
BLAST of mRNA_H-paniculata_contig8292.16313.1 vs. uniprot
Match: A0A835QWQ2_VANPL (Protein-serine/threonine phosphatase n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835QWQ2_VANPL) HSP 1 Score: 63.9 bits (154), Expect = 5.500e-9 Identity = 38/122 (31.15%), Postives = 65/122 (53.28%), Query Frame = 2
Query: 128 RVMREALLDGFCRTEKAFNEFADTHKDNSGSTAVVAMVCDSWVVIANVGDSS-----GLFYNENAWVARNG--ERSVQTKAHNINNPDEKSRVEAAGGTFENGRLFNKLQPTRTFGNRDVRR 472
+ + A+L+GF RT+++ + + G+TAV V V IAN+GD+ G+ + A N + V T+ H P E++R++ AGGT NGRL +++ +R FG+R ++
Sbjct: 183 KAAKRAILEGFQRTDESLLQESLQGNWQDGATAVCVWVLQQMVFIANIGDAKAVLARGITSDGTQTSANNAGIKAIVLTREHKAIYPQERTRIQKAGGTITNGRLQGRIEVSRAFGDRHFKK 304
BLAST of mRNA_H-paniculata_contig8292.16313.1 vs. uniprot
Match: A0A835QXZ3_VANPL (Protein-serine/threonine phosphatase n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835QXZ3_VANPL) HSP 1 Score: 63.9 bits (154), Expect = 5.570e-9 Identity = 38/122 (31.15%), Postives = 65/122 (53.28%), Query Frame = 2
Query: 128 RVMREALLDGFCRTEKAFNEFADTHKDNSGSTAVVAMVCDSWVVIANVGDSS-----GLFYNENAWVARNG--ERSVQTKAHNINNPDEKSRVEAAGGTFENGRLFNKLQPTRTFGNRDVRR 472
+ + A+L+GF RT+++ + + G+TAV V V IAN+GD+ G+ + A N + V T+ H P E++R++ AGGT NGRL +++ +R FG+R ++
Sbjct: 221 KAAKRAILEGFQRTDESLLQESLQGNWQDGATAVCVWVLQQMVFIANIGDAKAVLARGITSDGTQTSANNAGIKAIVLTREHKAIYPQERTRIQKAGGTITNGRLQGRIEVSRAFGDRHFKK 342
BLAST of mRNA_H-paniculata_contig8292.16313.1 vs. uniprot
Match: A0A1U7ZNJ3_NELNU (probable protein phosphatase 2C 8 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7ZNJ3_NELNU) HSP 1 Score: 62.8 bits (151), Expect = 1.380e-8 Identity = 41/131 (31.30%), Postives = 67/131 (51.15%), Query Frame = 2
Query: 122 LPRVM------REALLDGFCRTEKAFNEFADTHKDNSGSTAVVAMVCDSWVVIANVGDSSGLFYNE-NAWVARNGERS-------VQTKAHNINNPDEKSRVEAAGGTFENGRLFNKLQPTRTFGNRDVRR 472
LPR + ++A+LDGF RT+++ + + G+TAV V V IAN+GD+ + A +N V T+ H P E++R++ AGG+ NGRL +L+ +R FG+R ++
Sbjct: 173 LPRELMDVKSAKKAILDGFRRTDESLLQESSAGGWQDGATAVCVWVLGQTVFIANIGDAKAVVARSLTADTLQNHSDGASPLKAIVLTREHKAIYPQERARIQKAGGSVSNGRLQGRLEVSRAFGDRQFKK 303
BLAST of mRNA_H-paniculata_contig8292.16313.1 vs. uniprot
Match: A0A7S4EXC5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EXC5_CHRCT) HSP 1 Score: 61.6 bits (148), Expect = 3.250e-8 Identity = 44/125 (35.20%), Postives = 63/125 (50.40%), Query Frame = 2
Query: 128 RVMREALLDGFCRTEKAFNEFADTHKDNSGSTAVVAMVCDSW-------VVIANVGDSSGLFYNENAWVARNGERSVQTKAHNINNPDEKSRVEAAGGTFENG---RLFNKLQPTRTFGNRDVRR 472
R++ +A +GF T+ F +A H G+TAV M+ S +++ANVGDS A V RNG ++ H N PDEK+RVEAAGG R+ L +R FG+ ++R
Sbjct: 149 RLLEDACKEGFTATDNEFIRYAVQHAIPDGTTAVCCMLQSSLGNAQPRRLLVANVGDSRC------AMVKRNGSAVALSRDHKPNRPDEKARVEAAGGHVIFAGCWRVQGDLAVSRAFGDLHLKR 267
BLAST of mRNA_H-paniculata_contig8292.16313.1 vs. uniprot
Match: A0A0M0JU02_9EUKA (Protein phosphatase 2c n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JU02_9EUKA) HSP 1 Score: 59.3 bits (142), Expect = 4.240e-8 Identity = 36/112 (32.14%), Postives = 59/112 (52.68%), Query Frame = 2
Query: 134 MREALLDGFCRTEKAFNEFADTHKDNSGSTAVVAMVCDSWVVIANVGDSSGLFYNENAWVARNGERSVQTKAHNINNPDEKSRVEAAGGTFENGRLFNKLQPTRTFGNRDVR 469
+ +AL + F T+ F + +GSTAVVA+V ++V++AN GDS + + E G + H + PDE R++ AGG +GR+ + L R+ G+RD +
Sbjct: 15 LADALREAFLATDA---HFMRSSSSQAGSTAVVALVTRTYVIVANAGDSRCVLWRE-------GRVLPLSVDHKPDRPDELQRIKDAGGWVAHGRVLHILAVARSLGDRDFK 116
BLAST of mRNA_H-paniculata_contig8292.16313.1 vs. uniprot
Match: A0A804KW63_MUSAM (Protein-serine/threonine phosphatase n=4 Tax=Musaceae TaxID=4637 RepID=A0A804KW63_MUSAM) HSP 1 Score: 61.2 bits (147), Expect = 4.660e-8 Identity = 38/113 (33.63%), Postives = 60/113 (53.10%), Query Frame = 2
Query: 131 VMREALLDGFCRTE-KAFNEFADTHKDNSGSTAVVAMVCDSWVVIANVGDSSGLFYNENAWVARNGERSVQTKAHNINNPDEKSRVEAAGGT---FENGRLFNKLQPTRTFGN 457
+ R AL+ GF R + + E + GSTAVVA+V + W+++AN GDS + ++R G + H + PDE+ RVEA GG ++ R+ L +R+FG+
Sbjct: 162 MWRRALVAGFARVDAEVMGETRQLRQGMVGSTAVVAVVAEKWIIVANCGDSRAV-------LSRGGVAVPLSIDHKPDRPDERGRVEALGGRILCWDCPRVLGVLATSRSFGD 267
BLAST of mRNA_H-paniculata_contig8292.16313.1 vs. uniprot
Match: A7SJS2_NEMVE (Predicted protein n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7SJS2_NEMVE) HSP 1 Score: 60.8 bits (146), Expect = 6.210e-8 Identity = 36/110 (32.73%), Postives = 54/110 (49.09%), Query Frame = 2
Query: 134 MREALLDGFCRTEKAFNEFA--DTHKDNSGSTAVVAMVCDSWVVIANVGDSSGLFYNENAWVARNGERSVQTKAHNINNPDEKSRVEAAGGTFENGRLFNKLQPTRTFGN 457
+R L D F + + + +D SGSTA+ +V + + AN GDS G+ ++ NGE T H NPDEK+R+E AGG+ R+ L +R G+
Sbjct: 101 LRSGLRDAFLELDSTMQKLPKWSSGEDKSGSTAIALLVTPKYYIFANCGDSRGI-------LSHNGEVIYNTVDHKPGNPDEKTRIENAGGSVMIQRVNGALAVSRALGD 203 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8292.16313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8292.16313.1 >prot_H-paniculata_contig8292.16313.1 ID=prot_H-paniculata_contig8292.16313.1|Name=mRNA_H-paniculata_contig8292.16313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp MREALLDGFCRTEKAFNEFADTHKDNSGSTAVVAMVCDSWVVIANVGDSSback to top mRNA from alignment at H-paniculata_contig8292:7146..9230+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8292.16313.1 ID=mRNA_H-paniculata_contig8292.16313.1|Name=mRNA_H-paniculata_contig8292.16313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2085bp|location=Sequence derived from alignment at H-paniculata_contig8292:7146..9230+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8292:7146..9230+ >mRNA_H-paniculata_contig8292.16313.1 ID=mRNA_H-paniculata_contig8292.16313.1|Name=mRNA_H-paniculata_contig8292.16313.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at H-paniculata_contig8292:7146..9230+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |