mRNA_H-paniculata_contig828.16303.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig828.16303.1 vs. uniprot
Match: D7FSF6_ECTSI (Diphthine--ammonia ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF6_ECTSI) HSP 1 Score: 295 bits (756), Expect = 4.210e-87 Identity = 160/322 (49.69%), Postives = 212/322 (65.84%), Query Frame = 3
Query: 891 LQDIEDAHQAACDAGVPRYSDPSTGYKVFTRDAHEKRSFCCGNVCRHCPFGHVDVIPEYRPAGSVPKTALFAQFRKRRKAKLTVGSAWKSFEDEEP-PRDVLLWSGGKNSLLALRALQNGRKLTGEDCKITLLTTYDGASGNVPFQDATVANVMAQAKREGLDILTVPINDSVTATLGGSDPLEASSHHYASTVLAALKPLRVRSLAFGDARSQASRNRREKAFYERPFPPKYPCRFPIFGVPEDRLFARLWAE--DGITIKVSHVAVGDPGNGCGAEGLAVGDVLDQTLLACLPRKGAGVFFLSERREVHTHVHYHEDVGN 1847
L+DIE+AH AAC+AGV Y+DP+TGYKVFT+ +HEKR FCCGN CRHCPFGH++V PE+R AGSVPKT + AQ RK+RK+KLTVG WK+F D+ R VL WSGGK+S L LRALQ ++ +ITLLTT+DG +G +PFQD + +V+ QA+ EG+D+L VP+ GGS P + Y+ T+ AALKPLRV++LAFGD Q ++ R+ F YPC FP+F VP + L +RLW E G+T+KVS V+ G EG++VGDV + + LP V + E E HTHV+++ G+
Sbjct: 14 LRDIEEAHTAACNAGVAHYADPATGYKVFTQASHEKRGFCCGNACRHCPFGHLEVNPEWRLAGSVPKTVMLAQHRKQRKSKLTVGEGWKAFTDDGGGERTVLFWSGGKDSFLTLRALQKRKREERGSERITLLTTFDGKTGKIPFQDTKITDVLEQARHEGVDLLAVPLG-------GGSGPFPDA---YSVTLKAALKPLRVKALAFGDLHLQELKSWRQDVFSG-----AYPCEFPLFEVPYEELLSRLWEEIAAGVTLKVSSVSTDHKG----LEGISVGDVYCEAFVKRLPDI---VDAMGENGEFHTHVYHNRGKGD 313
BLAST of mRNA_H-paniculata_contig828.16303.1 vs. uniprot
Match: A0A835YXG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXG3_9STRA) HSP 1 Score: 184 bits (467), Expect = 5.990e-48 Identity = 129/314 (41.08%), Postives = 160/314 (50.96%), Query Frame = 3
Query: 894 QDIEDAHQAACDAGVPRYSDPSTGYKVFTRDAHEKRSFCCGNVCRHCPFGHVDVI-PEYRPAGSVPKTALFAQFRKRRKAKLTVGSAWKSFEDEEPPRDVLLWSGGKNSLLALRALQNGRKLTGEDCKITLLTTYDGASGNVPFQDATVANVMAQAKREGLDILTVPINDSVTATLGGSDPLEASSHHYASTVLAALKPL--RVRSLAFGDARSQASRNRREKAFYERPFPPKYPCRFPIFGVPEDRLFARLWAE-DGITIKVSHVAVGDPGNGCGAEGLAVGDVLDQTLLACLPRKGAGVFFLSERREVHTHV 1823
+DIEDAH+AACDAG YSDP+TGY VFT H KR FCCGN CRHCPF H +V P R G L P +VL WSGGK+S L LRALQ ++ ++ L+TT D SG V FQ+ + +VM QAK +D+L VP+ +T G+ P Y V+AAL+P R+R+L FGD R RE F + YPCRFP+F P L ARLWAE + TI V+ AV D G L +G D + LP+ GV + E E HTHV
Sbjct: 7 RDIEDAHKAACDAGEMAYSDPATGYTVFTELQHIKRGFCCGNGCRHCPFLHQNVEDPALRKNGPTKTVLLNDGSDASXXXXXXXXXXXXXSARGGGPLNVLFWSGGKDSFLTLRALQAEQRDDPGAPEVMLITTCDAVSGTVAFQNTNIRDVMDQAKALQVDLLAVPLKGGEAST--GAGP-------YVDAVMAALEPFKQRIRALCFGDLHLVDIRAWREATFTD-----TYPCRFPLFNTPYAELKARLWAEAERGTISVTVSAVRDDLLEQGP--LRIGAQYDAAFVGALPQ---GVDEMGENGEFHTHV 301
BLAST of mRNA_H-paniculata_contig828.16303.1 vs. uniprot
Match: A0A2T7UGM1_9BURK (Uncharacterized protein n=1 Tax=Limnohabitans planktonicus II-D5 TaxID=1293045 RepID=A0A2T7UGM1_9BURK) HSP 1 Score: 128 bits (322), Expect = 5.110e-29 Identity = 101/319 (31.66%), Postives = 142/319 (44.51%), Query Frame = 3
Query: 900 IEDAHQAACDAGVPRYSDPSTGYKVFTRDAHEKRSFCCGNVCRHCPFGHVDVI-PEYRPAGSVPKTALFAQFRKRRKAKLTVGSAWKSFEDEEPPRDVLLWSGGKNSLLALRALQNGRKLTGEDCKITLLTTYDGASGNVPFQDATVANVMAQAKREGLDILTVPINDSVTATLGGSDPLEASSHHYASTVLAALKPL------RVRSLAFGDARSQASRNRREKAFYERPFPPKYPCRFPIFGVPEDRLFARLWAED---GITIKVS-HVAVGDPGNGCGAEGLAVGDVLDQTLLACLPRKGAGVFFLSERREVHTHV 1823
+ H+ AC+ G Y DP+TGY+VFT A K+ CCGN CRHCP+GH+ V P + P S+ K + + ED + DVL WSGGK+S L L L RK + LLTT+D + VP Q+ + +++ QA + + VP++ V Y V A L L R+ + FGD Q RN R KA+ P+Y P+FG P L LW +++ +S + + D L +G D+TL+ L R AGV + E E HT V
Sbjct: 4 VHTLHRLACEQGADTYCDPATGYRVFTEHALFKKGDCCGNACRHCPYGHIKVSKPGHEP--SIKKPVVLGR---------------DLIEDAQDGLDVLFWSGGKDSFLCLSCLLEKRK------NVALLTTFDTVTNRVPIQNIPIKDIVHQAAYLEVPVCLVPLSPDV---------------RYQDAVSAGLLTLEEQLGSRINRICFGDLHLQDLRNWRVKAW------PQYEVFTPLFGQPYAALLELLWKSIHRYDVSVHLSTELHLPDAV-------LPIGTPYDKTLVERLQR--AGVDVMLELGEGHTRV 269
BLAST of mRNA_H-paniculata_contig828.16303.1 vs. uniprot
Match: A0A358DN45_9DELT (Diphthami_syn_2 domain-containing protein n=2 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A358DN45_9DELT) HSP 1 Score: 124 bits (311), Expect = 1.020e-27 Identity = 102/313 (32.59%), Postives = 138/313 (44.09%), Query Frame = 3
Query: 903 EDAHQAACDAGVPRYSDPSTGYKVFTRDAHEKRSFCCGNVCRHCPFGHVDVIPEYRPAGSVPKTALFAQFRKRRKAKLTVGSAWKSFEDEEPPRDVLLWSGGKNSLLALRALQNGRKLTGEDCKITLLTTYDGASGNVPFQDATVANVMAQAKREGLDILTVPINDSVTATLGGSDPLEASSHHYASTVLAALKPLRVRS----LAFGDARSQASRNRREKAFYERPFPPKYPCRFPIFGVPEDRLFARLWAEDGITIKVSHVAVGDPGNGCGAEGLAVGDVLDQTLLACLPRKGAGVFFLSERREVHTHVHY 1829
E H AC G YSDP TGY VFT A E+R CCG CRHCP+GH +V P+ R + W + P D+L WSGGK+S L LRAL+ R+ T LLTT+DG S V Q+ V + Q KR G + VP+ Y VL ++ L+ R+ L FGD R RE AF P P++G+P + L L + ++ AV D C A+ ++VGD+ ++ L+A LP KG F E E H+ + +
Sbjct: 6 EKLHLKACSQGALTYSDPRTGYPVFTALALERRGDCCGCGCRHCPYGHQEVTPDERA--------------------MLHRDPWIEGDLPTGPVDLLFWSGGKDSYLTLRALE--REATNPT---VLLTTFDGRSEQVAHQEVLVQEIRHQRKRLGCAQVLVPLFPGTG---------------YMDRVLLGIQTLQFRTPVARLVFGDLHLDHVRTWREDAFSACSDIASIPIHLPLWGIPYEELLNDL---ESAPVQARVSAVAD--ETC-AQVISVGDLFNRDLIARLP-KGTDAF--GENGEFHSCIEF 269
BLAST of mRNA_H-paniculata_contig828.16303.1 vs. uniprot
Match: A0A7R9TNL1_9VIRI (Diphthine--ammonia ligase (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TNL1_9VIRI) HSP 1 Score: 123 bits (309), Expect = 2.150e-26 Identity = 110/317 (34.70%), Postives = 148/317 (46.69%), Query Frame = 3
Query: 897 DIED---AHQAACDAGVPRYSDPSTGYKVFTRDAHEKRSFCCGNVCRHCPFGHVDVIPEYRPAGSVPKTALFAQFRKRRKAKLTVGSAWKSFEDEEPPRDVLLWSGGKNSLLALRAL-QNGRKLTGEDCKITLLTTYDGASGNVPFQDATVANVMAQAKREGLDILTVPINDSVTATLGGSDPLEASSHHYASTVLAALKPLR------VRSLAFGDARSQASRNRREKAFYERPFPPKYPCRFPIFGVPEDRLFARLWAEDGITIKVSHVAVGDPGNGCGAEGLAVGDVLDQTLLACLPRKGAGVFFLSERREVHT 1817
DIED H+ AC AG Y DP TGY V TR HE R CCG+ CRHCP+ H +V + AG + + A R G+ + E +L+WSGGK+S LALRAL ++GR L ++ LLTT+D AS + Q+ +A+V QA GL +L VP++ GG+ Y ST+ +AL R VR +A GD + RE+AF P +P G D L + L A + ++ AV D G+AVGD+ + L R G F E E HT
Sbjct: 103 DIEDWHALHERACAAGELTYVDPETGYSVMTRLKHEARGRCCGSGCRHCPYDHANVKDK---AGRIQQPAFLTPVRDSEGD----GAGGRC---EGGGTTLLMWSGGKDSFLALRALVRSGRPLH----QLALLTTFDAASRRIAHQEVPIADVERQAAHLGLPLLGVPLHR------GGN---------YTSTLASALSLARRRLPGGVRDIACGDLHLVHIKQWREEAFGRLGVPLIFPVWSDEAGANYDELASDLEASG---VPCTYSAVAD--KKMADAGVAVGDLYCARVRQTLVRAGLDAF--GENGEAHT 383
BLAST of mRNA_H-paniculata_contig828.16303.1 vs. uniprot
Match: A0A1Y2C0D4_9FUNG (Diphthine--ammonia ligase (Fragment) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C0D4_9FUNG) HSP 1 Score: 123 bits (309), Expect = 2.350e-26 Identity = 95/276 (34.42%), Postives = 134/276 (48.55%), Query Frame = 3
Query: 876 KNSNALQDIEDAHQAACDAGVPRYSDPSTGYKVFTRDAHEKRSFCCGNVCRHCPFGHVDVIPEYRPAGSVPKTALFAQFRKRRKAKL----------TVGSAWKSFEDEEPPRD---VLLWSGGKNSLLALRAL-QNGRKLTGEDCKITLLTTYDGASGNVPFQDATVANVMAQAKREGLDILTVPI-----NDSVTATLGGSDPLEASSHHYASTVLAALKPLRVRSLAFGDARSQASRNRREKAFYERPFPPKYPCRFPIFGVP-EDRLFARLW 1643
K N +IE+AH AAC A Y DP+TGY V T +++ CCGN CRHCP+GH V R + K+ +F + +K L T+ + S + E D VL WSGGK+S L L L QN G I LLTT+D + VP Q+ ++ ++ AQ+ L +L VP N++ T+ +D LE S ++ L + K ++ L FGD + R RE +F YPCRFP+F + + L RLW
Sbjct: 58 KKRNFDVEIEEAHTAACAAKQQMYDDPATGYSVMTAWYLKEKQECCGNACRHCPYGHSRVKDSTRRKNKI-KSPVFLKPSATKKGTLDSIRNSTTITTLPDSRFSSKQEFESADGLIVLFWSGGKDSFLTLSTLLQNA----GPKASIVLLTTFDAETSKVPIQNISIGDISAQSSCLNLPLLLVPRGADSKNETYIKTI--TDALEQLSREMSA--LDSSKSSTIQYLVFGDLFLEDIRAWRESSFSN-----LYPCRFPLFELDFQKNLMPRLW 319
BLAST of mRNA_H-paniculata_contig828.16303.1 vs. uniprot
Match: A0A8J5X349_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X349_DIALT) HSP 1 Score: 117 bits (293), Expect = 7.010e-25 Identity = 84/223 (37.67%), Postives = 110/223 (49.33%), Query Frame = 3
Query: 888 ALQDIEDAHQAACDAGVPRYSDPSTGYKVFTRDAHEKRSFCCGNVCRHCPFGHVDVIPEYRPAGSVPKTALFAQFRKRRKAKLTVGSAWKSFEDEEPPRDVLLWSGGKNSLLALRALQNGRKLT--GEDCKITLLTTYDGASGNVPFQDATVANVMAQAKREGLDILTVPINDSVTATLGGSDPLEASSHHYASTVLAALKPLRVRSLAFGDARSQASRNRRE 1550
AL D+E+ H+AAC AG Y DP TG VFTR AH +R CCGN CRHCP+GHV V + ++ L S + E+ DVL +SGGK+S LALR Q G + L+TT+ G G V Q V + AQA+ +D+L VP++ G SD A +H A VLAA + R + FGD ++ R RE
Sbjct: 2 ALVDVEELHEAACAAGRRGYCDPRTGLTVFTRVAHLQRGRCCGNGCRHCPYGHVLVTDASKRTNAIDAPRLLR------------ASPPSALEES----DVLFFSGGKDSYLALRRHQRVLATLDGGAPRGLVLVTTFSGTDGIVGHQQVPVRWIAAQARAMRIDLLVVPLD-------GRSDYPAAVAH--ALQVLAAEHGVHARRVVFGDLHVESIRAWRE 199
BLAST of mRNA_H-paniculata_contig828.16303.1 vs. uniprot
Match: A0A5D6YFB2_9STRA (Diphthine--ammonia ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFB2_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.010e-24 Identity = 99/273 (36.26%), Postives = 127/273 (46.52%), Query Frame = 3
Query: 858 DSASCGKNSNALQDIEDAHQAACDAGVPRYSDPSTGYKVFTRDAHEKRSFCCGNVCRHCPFGHVDVIPEYRPAGSVPKTALFAQFRKRRKAKLTVGSA----------WKSFEDEE----------PPRD--VLLWSGGKNSLLALRALQNGRKLTGEDC-KITLLTTYDGASGNVPFQDATVANVMAQAKREGLDILTVPINDSVTATLGGSDPLEASSHHYASTVLAALKPLRVRS-------LAFGDARSQASRNRREKAF---YERPFP 1577
DSA G S AL +IE+ H+ AC Y+DP+TGY V T E+R CCGN CRHCP+GH +V R V A ++RR +VG A W +E PPRD VL WSGGK+S LAL L + + ++ LLTT D + VP Q+ V V+AQA+ L + V + LG + YAS V AAL+ L ++ LAFGD R RE+AF YE FP
Sbjct: 346 DSADSGVLSPALVEIEELHRIACAKQEAMYTDPATGYSVLTAHFLEQRQTCCGNCCRHCPYGHANVKDASRRTNVVAHDVFLAPPKRRRVKVPSVGGAAGESPGGALLWPEGYEEPIGGDSSTTAAPPRDLVVLFWSGGKDSFLALSHLYESYARSSKRMPQVVLLTTIDPGTNTVPVQNIDVQTVVAQAQALELPLYLVAVG------LGAA---------YASKVDAALQQLPAKAKRAAIDTLAFGDLHLADIRGWREQAFAGRYELAFP 603
BLAST of mRNA_H-paniculata_contig828.16303.1 vs. uniprot
Match: UPI001C0B1111 (DUF5522 domain-containing protein n=1 Tax=Polynucleobacter sp. 15G-AUS-farblos TaxID=2689094 RepID=UPI001C0B1111) HSP 1 Score: 114 bits (285), Expect = 3.140e-24 Identity = 75/249 (30.12%), Postives = 117/249 (46.99%), Query Frame = 3
Query: 897 DIEDAHQAACDAGVPRYSDPSTGYKVFTRDAHEKRSFCCGNVCRHCPFGHVDVIPEYRPAGSVPKTALFAQFRKRRKAKLTVGSAWKSFEDEEPPRDVLLWSGGKNSLLALRALQNGRKLTGEDCKITLLTTYDGASGNVPFQDATVANVMAQAKREGLDILTVPINDSVTATLGGSDPLEASSHHYASTVLAALKPLRVRSLAFGDARSQASRNRREKAFYERPFPPKYPCRFPIFGVPEDRLFARLW 1643
DI++ H+AAC AG Y DP++GY+V T A ++ CCGN CRHCP+GH++V ++ K ++ G ++ ++ DVL WSGGK+S LAL L K K+ LLT++ + V QD + N+ QA+ L + VP++ + + L+ S + + L FGD Q+ R R + P+Y P+F VP ++L + LW
Sbjct: 4 DIDELHRAACAAGRDTYIDPASGYQVLTSKALLRKGSCCGNSCRHCPYGHINVGDP-----NLTKQSM-------------AGPVLMNWSGKDQNIDVLFWSGGKDSFLALDHLIQENK------KVILLTSFGALTSRVSIQDIHIKNIAKQAEFFKLALCLVPLSPNTDYKASIQEALDLISTQTGA---------HIERLVFGDLHLQSIRQWRVDTW------PQYLIYTPLFDVPYEKLLSNLW 213
BLAST of mRNA_H-paniculata_contig828.16303.1 vs. uniprot
Match: UPI0012EB1739 (DUF5522 domain-containing protein n=1 Tax=Novosphingopyxis baekryungensis TaxID=279369 RepID=UPI0012EB1739) HSP 1 Score: 114 bits (284), Expect = 4.550e-24 Identity = 103/305 (33.77%), Postives = 132/305 (43.28%), Query Frame = 3
Query: 912 HQAACDAGVPRYSDPSTGYKVFTRDAHEKRSFCCGNVCRHCPFGHVDVIPEYRPAGSVPKTALFAQFRKRRKAKLTVGSAWKSFEDEEPPRDVLLWSGGKNSLLALRALQNGRKLTGEDCKITLLTTYDGASGNVPFQDATVANVMAQAKREGLDILTVPINDSVTATLGGSDPLEASSHHYASTVLAALKPLR-VRSLAFGDARSQASRNRREKAFYERPFPPKYPCRFPIFGVPEDRLFARLWAEDGITIKVSHVAVGDPGNGCGAEGLAVGDVLDQTLLACLPRKGAGVFFLSERREVHTHV 1823
H+AAC G Y+DP TGY VFTR +R CCG CRHCPF H D + A + + A +R A +T +L WSGGK+S LALRALQ I LLTT+D S + Q+ + V+ QA + ++ VP++ G+D Y + AAL + + L FGD R RE+AF P FP++ D L L A G T VS VA +AVGDV D L A LP A V E E HT +
Sbjct: 12 HEAACARGDFTYNDPDTGYVVFTRLGLLQRERCCGAGCRHCPFDH-DAVKLAARAQKIQQAAWLTDAPERTDAAVT----------------LLFWSGGKDSYLALRALQREGH-----ANIVLLTTFDAHSRTIAHQEFAIDVVVEQAAHLDVPLIGVPLHP-------GAD--------YVEQIAAALDLVPDCQRLCFGDLHLAHIRAWREQAFAHHPRTADLDLVFPLWNADYDMLLTDLHAS-GATSIVSAVAPD-------LSQIAVGDVFDAKLQARLP---AHVDPFGENGEFHTRI 268 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig828.16303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig828.16303.1 >prot_H-paniculata_contig828.16303.1 ID=prot_H-paniculata_contig828.16303.1|Name=mRNA_H-paniculata_contig828.16303.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=480bp MPLRSVVSLSANIFHRASTYFVSRLSSTFRADTRFGSCSASETTRGHQKQback to top mRNA from alignment at H-paniculata_contig828:23566..30289+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig828.16303.1 ID=mRNA_H-paniculata_contig828.16303.1|Name=mRNA_H-paniculata_contig828.16303.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6724bp|location=Sequence derived from alignment at H-paniculata_contig828:23566..30289+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig828:23566..30289+ >mRNA_H-paniculata_contig828.16303.1 ID=mRNA_H-paniculata_contig828.16303.1|Name=mRNA_H-paniculata_contig828.16303.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2880bp|location=Sequence derived from alignment at H-paniculata_contig828:23566..30289+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |