mRNA_H-paniculata_contig8271.16292.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8271.16292.1 vs. uniprot
Match: UPI001E1BC9B8 (uncharacterized protein LOC116934501 n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BC9B8) HSP 1 Score: 73.2 bits (178), Expect = 2.840e-13 Identity = 31/71 (43.66%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 34 EEAQETRGFLYREAVGALMWAAMMTGPDVAYVVCTVTKFCENPRMAYKKAVETILQYVLSTADLGITYGSQ 246
++++ RG+ +REAVGAL++ A+ T PD+AY VC + KFC+NP + KA++ I Y+ +T + GI G Q
Sbjct: 1120 QQSEGERGYSFREAVGALLYIALQTRPDLAYAVCRIAKFCQNPMNEHWKALDQIFGYLKATKEYGIWVGGQ 1190
BLAST of mRNA_H-paniculata_contig8271.16292.1 vs. uniprot
Match: UPI001C9BC1AB (secreted RxLR effector protein 161-like n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9BC1AB) HSP 1 Score: 71.6 bits (174), Expect = 3.440e-13 Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 1 PLSKENGPRTQEEAQETRGFLYREAVGALMWAAMMTGPDVAYVVCTVTKFCENPRMAYKKAVETILQYVLSTADLGITY 237
PLS E P EE + YREAVG LM+AA++T PD+ Y V V++F NP + KAV+ IL+Y+ T +GI Y
Sbjct: 16 PLSNEQSPVNDEEKVSMQEMPYREAVGCLMFAAILTRPDIMYAVSQVSRFLNNPGKEHWKAVKRILRYIQGTKYMGIKY 94
BLAST of mRNA_H-paniculata_contig8271.16292.1 vs. uniprot
Match: A0A284S2Y9_ARMOS (Uncharacterized protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284S2Y9_ARMOS) HSP 1 Score: 71.2 bits (173), Expect = 1.350e-12 Identity = 30/79 (37.97%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 4 LSKENGPRTQEEAQETRGFLYREAVGALMWAAMMTGPDVAYVVCTVTKFCENPRMAYKKAVETILQYVLSTADLGITYG 240
+S+E P T + + R YRE +G L+W + T PD+A+ VC +++F +NP + A + +LQY+ T LG+TYG
Sbjct: 1193 ISREQCPNTPSDVADMRDVPYRELIGGLIWLSTATRPDLAFTVCVLSRFLDNPGRPHWNAAKRVLQYLKGTRTLGLTYG 1271
BLAST of mRNA_H-paniculata_contig8271.16292.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI) HSP 1 Score: 70.9 bits (172), Expect = 1.840e-12 Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 4 LSKENGPRTQEEAQETRGFLYREAVGALMWAAMMTGPDVAYVVCTVTKFCENPRMAYKKAVETILQYVLSTADLGITYGSQ 246
LSK P + E R YREA+GALM+AA+ T PD+A+ V T+ +F +NP + AV+ I +Y+L T L + YG Q
Sbjct: 1077 LSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPHWDAVKRIFRYLLGTRTLSLIYGGQ 1157
BLAST of mRNA_H-paniculata_contig8271.16292.1 vs. uniprot
Match: W4JU83_HETIT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=3 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4JU83_HETIT) HSP 1 Score: 68.6 bits (166), Expect = 3.070e-12 Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 1
Query: 4 LSKENGPRTQE-EAQETRGFLYREAVGALMWAAMMTGPDVAYVVCTVTKFCENPRMAYKKAVETILQYVLSTADLGITYG 240
LS E PR E +E R + Y VGALM+AA+ T PD+AY V T+ ++ NP M + A + +L+YV T DL +TYG
Sbjct: 119 LSNEQSPRLYSAEWEEMRKYPYAALVGALMYAALATRPDLAYTVNTLAQYMSNPGMEHWHAAKRVLRYVKGTLDLALTYG 198
BLAST of mRNA_H-paniculata_contig8271.16292.1 vs. uniprot
Match: Q45W65_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W65_PHACR) HSP 1 Score: 69.3 bits (168), Expect = 6.440e-12 Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 4 LSKENGPRTQEEAQETRGFLYREAVGALMWAAMMTGPDVAYVVCTVTKFCENPRMAYKKAVETILQYVLSTADLGITYG 240
LSKE+ P T E E R YR+A+GALM+AA+ T PD+AY V + +F ENP M + A+ + Y+ T DL + G
Sbjct: 1273 LSKEDCPSTAAEVAEMRHKPYRQALGALMYAAIATRPDIAYAVNQLARFAENPGMKHWNALRRVYAYLKGTRDLSLVLG 1351
BLAST of mRNA_H-paniculata_contig8271.16292.1 vs. uniprot
Match: UPI001E1BC78C (secreted RxLR effector protein 161-like n=2 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BC78C) HSP 1 Score: 67.4 bits (163), Expect = 1.370e-11 Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 22 PRTQEEAQETRGFLYREAVGALMWAAMMTGPDVAYVVCTVTKFCENPRMAYKKAVETILQYVLSTADLGITYG 240
P+++ E + YREAVGAL++ A+MT PD+ Y V V+K+C+NP ++ AV I Y+ TAD GI G
Sbjct: 23 PKSEGEMTTASPYPYREAVGALLYVALMTRPDICYAVGQVSKYCQNPDPSHWDAVVQIFAYLKGTADYGIWLG 95
BLAST of mRNA_H-paniculata_contig8271.16292.1 vs. uniprot
Match: A0A0J7KAJ4_LASNI (Rna-dependent dna polymerase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KAJ4_LASNI) HSP 1 Score: 65.9 bits (159), Expect = 2.120e-11 Identity = 28/66 (42.42%), Postives = 46/66 (69.70%), Query Frame = 1
Query: 43 QETRGFLYREAVGALMWAAMMTGPDVAYVVCTVTKFCENPRMAYKKAVETILQYVLSTADLGITYG 240
++ R LYR+ VG+LM+ A++T PD+AY V T++KF ++P + A + +L+Y+ T D+GI YG
Sbjct: 23 EDPRNVLYRQLVGSLMYLAVVTRPDLAYTVATLSKFLDSPTDEHWNAGKRVLRYLAGTTDIGIMYG 88
BLAST of mRNA_H-paniculata_contig8271.16292.1 vs. uniprot
Match: A0A8H6Y342_9AGAR (Transcription factor n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6Y342_9AGAR) HSP 1 Score: 66.6 bits (161), Expect = 3.660e-11 Identity = 31/80 (38.75%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 4 LSKENGPRTQEEAQETRGFLYREAVGALMWAAMMTGPDVAYVVCTVTKFCENPRMAYKKAVETILQYVLSTADLGITYGS 243
L+ E+ P++ + + YREAVG+LMWAA+ T PD+A+VV ++K+ NP + +AV+ + +Y+ T D +TYG+
Sbjct: 57 LTTEHCPKSIRDIAAMKRIPYREAVGSLMWAAVGTRPDIAFVVGVLSKYLNNPGPTHWEAVKRVFRYLQGTKDWRLTYGA 136
BLAST of mRNA_H-paniculata_contig8271.16292.1 vs. uniprot
Match: A0A0J7K988_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K988_LASNI) HSP 1 Score: 66.6 bits (161), Expect = 5.700e-11 Identity = 30/58 (51.72%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 64 YREAVGALMWAAMMTGPDVAYVVCTVTKFCENPRMAYKKAVETILQYVLSTADLGITY 237
YREAVG+LM+AA+++ PD+ + V V+KF NP + +AV+TIL+YV +T D+GI Y
Sbjct: 1019 YREAVGSLMFAAVVSRPDIMFAVANVSKFLSNPSREHWQAVKTILRYVKNTLDVGIEY 1076 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8271.16292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8271.16292.1 >prot_H-paniculata_contig8271.16292.1 ID=prot_H-paniculata_contig8271.16292.1|Name=mRNA_H-paniculata_contig8271.16292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp PLSKENGPRTQEEAQETRGFLYREAVGALMWAAMMTGPDVAYVVCTVTKFback to top mRNA from alignment at H-paniculata_contig8271:9863..10108- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8271.16292.1 ID=mRNA_H-paniculata_contig8271.16292.1|Name=mRNA_H-paniculata_contig8271.16292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=246bp|location=Sequence derived from alignment at H-paniculata_contig8271:9863..10108- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8271:9863..10108- >mRNA_H-paniculata_contig8271.16292.1 ID=mRNA_H-paniculata_contig8271.16292.1|Name=mRNA_H-paniculata_contig8271.16292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=492bp|location=Sequence derived from alignment at H-paniculata_contig8271:9863..10108- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |