mRNA_H-paniculata_contig8260.16281.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8260.16281.1
Unique NamemRNA_H-paniculata_contig8260.16281.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig8260.16281.1 vs. uniprot
Match: D7FJQ4_ECTSI (Enoyl coenzyme A hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ4_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 3.470e-65
Identity = 113/179 (63.13%), Postives = 139/179 (77.65%), Query Frame = 3 
Query:    3 VAINRPTKANSMNSTFFLELKECVDKLAVDPDCRVIIICGSGNMFSAGLDLDEHADVFREMTGASDSSGEKSGGTSFGSHKDSARTTTANMRFITRMQESLGSLQSCPKPVISAVHSGCIGAGVDLVCASDVRLATSDAWFSIKEVDIGLCADLGTLQRLQKLIGNDSLVRELVFTARR 539
            V INRP KAN+MN++FF EL+EC D LA+DP C  +++CGSG +FS+GLDL+EHA  F EMT  + + G+ +        +D AR +    RF++ MQ+SL SL  CPKPVI AVHS CIG GVDLVCA+D+RLA+SDAWFSIKEVDIGLCADLGTLQRL KLIG++SL RELVFTAR+
Sbjct:    3 VEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFSSGLDLEEHAQTFMEMTTPAPA-GDVT--------RDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARK 172
[Close]
BLAST of mRNA_H-paniculata_contig8260.16281.1 vs. uniprot
Match: A0A834NSQ7_VESPE (Uncharacterized protein n=2 Tax=Vespula TaxID=7451 RepID=A0A834NSQ7_VESPE)

HSP 1 Score: 186 bits (472), Expect = 3.290e-50
Identity = 90/179 (50.28%), Postives = 123/179 (68.72%), Query Frame = 3 
Query:    3 VAINRPTKANSMNSTFFLELKECVDKLAVDPDCRVIIICGSGNMFSAGLDLDEHADVFREMTGASDSSGEKSGGTSFGSHKDSARTTTANMRFITRMQESLGSLQSCPKPVISAVHSGCIGAGVDLVCASDVRLATSDAWFSIKEVDIGLCADLGTLQRLQKLIGNDSLVRELVFTARR 539
            V +NRP K N+MN   + E+K+C D L+V+PDCRVII+   G MF  GLDL ++ D+F++++                 H+D AR        I + Q S+ S++ C KPVI+AVHS CIG+GVD++CA+D+R  +SDAWF IKEVDIG+ AD+GTLQR  K+IG+DSLVRELV+TAR+
Sbjct:   49 VQLNRPEKRNAMNGKMWEEIKQCFDDLSVEPDCRVIILSAIGKMFCVGLDLQDNLDIFQKLS----------------EHEDVARKCKILESVIRKYQNSMTSIEKCAKPVIAAVHSACIGSGVDMICAADIRYCSSDAWFQIKEVDIGMAADVGTLQRFPKIIGSDSLVRELVYTARK 211
[Close]
BLAST of mRNA_H-paniculata_contig8260.16281.1 vs. uniprot
Match: A0A2C9JJ31_BIOGL (Uncharacterized protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JJ31_BIOGL)

HSP 1 Score: 184 bits (468), Expect = 1.370e-49
Identity = 92/179 (51.40%), Postives = 126/179 (70.39%), Query Frame = 3 
Query:    3 VAINRPTKANSMNSTFFLELKECVDKLAVDPDCRVIIICGSGNMFSAGLDLDEHADVFREMTGASDSSGEKSGGTSFGSHKDSARTTTANMRFITRMQESLGSLQSCPKPVISAVHSGCIGAGVDLVCASDVRLATSDAWFSIKEVDIGLCADLGTLQRLQKLIGNDSLVRELVFTARR 539
            V +NRP K N+MN+TF+ ++  C  KL+VDPDCRVI++ G+G MF+AGLDL E+ ++F+ +  +SDS             +DS+R +   ++ I  +QES   ++ CPKPVI+AVH+GCIG G+D++   D+R  T DAWF IKEVDIGL ADLGTLQR  K+IGNDSL REL +T R+
Sbjct:   53 VELNRPDKRNAMNTTFWKDIYNCFTKLSVDPDCRVIVLSGAGKMFTAGLDLYEN-EIFKSLL-SSDS-------------QDSSRKSFKILKGIQELQESFNVIEKCPKPVIAAVHNGCIGGGIDMIACCDMRYCTQDAWFQIKEVDIGLAADLGTLQRFPKIIGNDSLYRELAYTGRK 216
[Close]
BLAST of mRNA_H-paniculata_contig8260.16281.1 vs. uniprot
Match: A0A6P8I096_ACTTE (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I096_ACTTE)

HSP 1 Score: 184 bits (468), Expect = 1.900e-49
Identity = 92/179 (51.40%), Postives = 119/179 (66.48%), Query Frame = 3 
Query:    3 VAINRPTKANSMNSTFFLELKECVDKLAVDPDCRVIIICGSGNMFSAGLDLDEHADVFREMTGASDSSGEKSGGTSFGSHKDSARTTTANMRFITRMQESLGSLQSCPKPVISAVHSGCIGAGVDLVCASDVRLATSDAWFSIKEVDIGLCADLGTLQRLQKLIGNDSLVRELVFTARR 539
            V +NRP K N+MN  F+ E+ EC +K+  D DCR +++ G+G +F+AGLDL + A VF +                   + D+AR      + I   QES   ++ CPKPVI+A+HS CIG GVDLVCA D+RL +SDAWF IKEVDIGL AD+GTLQRL K++GNDSLVREL +TARR
Sbjct:   65 VELNRPEKRNAMNQAFWREMVECFNKITNDSDCRXVVVTGAGKIFTAGLDLMDMAGVFMQAGPE---------------NADAARKAAELRKIILSYQESFSVIEKCPKPVIAAIHSACIGGGVDLVCACDIRLCSSDAWFQIKEVDIGLAADVGTLQRLPKIVGNDSLVRELSYTARR 228
[Close]
BLAST of mRNA_H-paniculata_contig8260.16281.1 vs. uniprot
Match: UPI0016070FE6 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like isoform X1 n=5 Tax=Vespa TaxID=7443 RepID=UPI0016070FE6)

HSP 1 Score: 183 bits (465), Expect = 3.280e-49
Identity = 87/182 (47.80%), Postives = 126/182 (69.23%), Query Frame = 3 
Query:    3 VAINRPTKANSMNSTFFLELKECVDKLAVDPDCRVIIICGSGNMFSAGLDLDEHADVFREMTGASDSSGEKSGGTSFGSHKDSARTTTANMRFITRMQESLGSLQSCPKPVISAVHSGCIGAGVDLVCASDVRLATSDAWFSIKEVDIGLCADLGTLQRLQKLIGNDSLVRELVFTARR*AA 548
            V +NRP K N+MN   + E+K+C D L+++PDCRVII+   G MF  GLDL ++ +++++++                 H+D AR        I + Q+S+ S++ C KPVI++VHS CIG+GVD++CA+D+R  +SDAWF IKEVDIG+ AD+GTLQR  K+IG+DSLVRELV+TAR+ +A
Sbjct:   49 VQLNRPEKRNAMNGKMWEEIKQCFDDLSIEPDCRVIILSAIGKMFCVGLDLQDNINIYQKLS----------------EHEDVARKCKVLEFMIKKYQDSISSIEKCAKPVIASVHSACIGSGVDMICAADIRYCSSDAWFQIKEVDIGMAADVGTLQRFPKIIGSDSLVRELVYTARKFSA 214
[Close]
BLAST of mRNA_H-paniculata_contig8260.16281.1 vs. uniprot
Match: A0A2C9JJ34_BIOGL (Uncharacterized protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JJ34_BIOGL)

HSP 1 Score: 184 bits (468), Expect = 1.680e-48
Identity = 92/179 (51.40%), Postives = 126/179 (70.39%), Query Frame = 3 
Query:    3 VAINRPTKANSMNSTFFLELKECVDKLAVDPDCRVIIICGSGNMFSAGLDLDEHADVFREMTGASDSSGEKSGGTSFGSHKDSARTTTANMRFITRMQESLGSLQSCPKPVISAVHSGCIGAGVDLVCASDVRLATSDAWFSIKEVDIGLCADLGTLQRLQKLIGNDSLVRELVFTARR 539
            V +NRP K N+MN+TF+ ++  C  KL+VDPDCRVI++ G+G MF+AGLDL E+ ++F+ +  +SDS             +DS+R +   ++ I  +QES   ++ CPKPVI+AVH+GCIG G+D++   D+R  T DAWF IKEVDIGL ADLGTLQR  K+IGNDSL REL +T R+
Sbjct:  151 VELNRPDKRNAMNTTFWKDIYNCFTKLSVDPDCRVIVLSGAGKMFTAGLDLYEN-EIFKSLL-SSDS-------------QDSSRKSFKILKGIQELQESFNVIEKCPKPVIAAVHNGCIGGGIDMIACCDMRYCTQDAWFQIKEVDIGLAADLGTLQRFPKIIGNDSLYRELAYTGRK 314
[Close]
BLAST of mRNA_H-paniculata_contig8260.16281.1 vs. uniprot
Match: UPI0001CB95FD (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB95FD)

HSP 1 Score: 181 bits (458), Expect = 3.750e-48
Identity = 88/183 (48.09%), Postives = 122/183 (66.67%), Query Frame = 3 
Query:    3 VAINRPTKANSMNSTFFLELKECVDKLAVDPDCRVIIICGSGNMFSAGLDLDEHADVFREMTGASDSSGEKSGGTSFGSHKDSARTTTANMRFITRMQESLGSLQSCPKPVISAVHSGCIGAGVDLVCASDVRLATSDAWFSIKEVDIGLCADLGTLQRLQKLIGNDSLVRELVFTARR*AAL 551
            V +NRP K N+MN  F+ E+ EC + +A DP+CR++I+ G+G  F++GLD+ +HADV   M G  D S                R     ++FI + QE+   ++ C KPVI+A+H+ C+G GVD++ A D+RL T DAWF IKEV++GL AD+GTLQRL K++GNDSLVREL +TARR  AL
Sbjct:   55 VELNRPKKLNAMNKAFWREMVECFNGIAQDPNCRIVILTGAGRAFTSGLDVMDHADVLMSMDGEDDVS----------------RKAFKFIQFIKKYQETFTVIEKCRKPVIAAIHNACVGGGVDMITACDIRLCTEDAWFQIKEVELGLAADVGTLQRLPKIVGNDSLVRELAYTARRFQAL 221
[Close]
BLAST of mRNA_H-paniculata_contig8260.16281.1 vs. uniprot
Match: A0A2J7RLD2_9NEOP (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RLD2_9NEOP)

HSP 1 Score: 177 bits (450), Expect = 5.140e-47
Identity = 89/179 (49.72%), Postives = 122/179 (68.16%), Query Frame = 3 
Query:    3 VAINRPTKANSMNSTFFLELKECVDKLAVDPDCRVIIICGSGNMFSAGLDLDEHADVFREMTGASDSSGEKSGGTSFGSHKDSARTTTANMRFITRMQESLGSLQSCPKPVISAVHSGCIGAGVDLVCASDVRLATSDAWFSIKEVDIGLCADLGTLQRLQKLIGNDSLVRELVFTARR 539
            V +NRP K N+M++T ++E+ +C  +L  DPDCRVI++ G+G +FSAG+DL + A +                GT  G H+D AR        I   Q+++ SL+ CPKPVISAVH+ CIG  VDL+ A+D+R  T+DAWF +KEVD GL AD+GTLQRL ++IG++SLVRELVFTAR+
Sbjct:   54 VELNRPKKLNAMHNTMWIEIGKCFTELGNDPDCRVIVLSGAGKVFSAGIDLADAAQL----------------GTKLGEHEDVARRCKILHDTIKLYQDAMTSLEKCPKPVISAVHNACIGGAVDLITAADIRYCTNDAWFQVKEVDTGLAADVGTLQRLPRVIGSESLVRELVFTARK 216
[Close]
BLAST of mRNA_H-paniculata_contig8260.16281.1 vs. uniprot
Match: UPI00109BEF07 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BEF07)

HSP 1 Score: 177 bits (448), Expect = 9.620e-47
Identity = 84/179 (46.93%), Postives = 118/179 (65.92%), Query Frame = 3 
Query:    3 VAINRPTKANSMNSTFFLELKECVDKLAVDPDCRVIIICGSGNMFSAGLDLDEHADVFREMTGASDSSGEKSGGTSFGSHKDSARTTTANMRFITRMQESLGSLQSCPKPVISAVHSGCIGAGVDLVCASDVRLATSDAWFSIKEVDIGLCADLGTLQRLQKLIGNDSLVRELVFTARR 539
            V +NRP K N+MN  F+ E++EC  K++ D DCR +++ G+G +F+AGLDL E A V  + TG                 +D +R        + + QES   +  C KPVI+A+HS C+G GVD++CA D+RL ++DAWF +KEV++GL AD+GTLQRL K+IGN+SLVREL +TARR
Sbjct:   53 VELNRPEKRNAMNQVFWREMRECFSKISSDADCRAVVLTGAGKIFTAGLDLMEMAGVLMQSTGGD---------------QDISRKAAKLRDVVLQYQESFTVIDKCSKPVIAAIHSACVGGGVDMICACDIRLCSADAWFQVKEVELGLAADVGTLQRLPKIIGNESLVRELCYTARR 216
[Close]
BLAST of mRNA_H-paniculata_contig8260.16281.1 vs. uniprot
Match: UPI0003F07BA5 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F07BA5)

HSP 1 Score: 176 bits (445), Expect = 1.090e-46
Identity = 88/180 (48.89%), Postives = 117/180 (65.00%), Query Frame = 3 
Query:    3 VAINRPTKANSMNSTFFLELKECVDKLAVDPDCRVIIICGSGNMFSAGLDL-DEHADVFREMTGASDSSGEKSGGTSFGSHKDSARTTTANMRFITRMQESLGSLQSCPKPVISAVHSGCIGAGVDLVCASDVRLATSDAWFSIKEVDIGLCADLGTLQRLQKLIGNDSLVRELVFTARR 539
            V +NRP K N+MN  F+ E+  C + +A DP+CRV+I+ G+G +F+AGLDL D     F ++                   KD AR        I ++QES   ++ C KPVI+A+H+GC+G GVD+V A D+RL T DAWF +KEVDIG+ AD+GTLQRL K+IGNDSL RELV+TARR
Sbjct:   24 VELNRPHKLNAMNDVFWREISTCFNGIAEDPNCRVVIVTGAGRLFTAGLDLTDSQILAFTDV------------------QKDVARRAMQVFDVIKKLQESFSFIEKCRKPVIAAIHNGCVGGGVDMVAACDIRLCTEDAWFQVKEVDIGVAADVGTLQRLPKIIGNDSLARELVYTARR 185
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8260.16281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJQ4_ECTSI3.470e-6563.13Enoyl coenzyme A hydratase n=1 Tax=Ectocarpus sili... [more]
A0A834NSQ7_VESPE3.290e-5050.28Uncharacterized protein n=2 Tax=Vespula TaxID=7451... [more]
A0A2C9JJ31_BIOGL1.370e-4951.40Uncharacterized protein n=2 Tax=Biomphalaria glabr... [more]
A0A6P8I096_ACTTE1.900e-4951.40delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
UPI0016070FE63.280e-4947.80delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A2C9JJ34_BIOGL1.680e-4851.40Uncharacterized protein n=2 Tax=Biomphalaria glabr... [more]
UPI0001CB95FD3.750e-4848.09delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A2J7RLD2_9NEOP5.140e-4749.72Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
UPI00109BEF079.620e-4746.93delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
UPI0003F07BA51.090e-4648.89delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8260contigH-paniculata_contig8260:5091..8827 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score214.2
Seed ortholog evalue4.8e-53
Seed eggNOG ortholog2880.D7FJQ4
Preferred nameECH1
KEGG koko:K12663
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0016042,GO:0016043,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0031907,GO:0031974,GO:0032787,GO:0033036,GO:0033365,GO:0034440,GO:0034613,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051750,GO:0055114,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:1901575
EggNOG free text desc.delta3,5-delta2,4-dienoyl-CoA isomerase activity
EggNOG OGsKOG1681@1,KOG1681@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size1934
Cds size507
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8260.16281.1prot_H-paniculata_contig8260.16281.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8260 6483..8792 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931037.169863-UTR-H-paniculata_contig8260:5090..64821622931037.169863-UTR-H-paniculata_contig8260:5090..6482Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8260 5091..6482 -
1691481560.9526467-UTR-H-paniculata_contig8260:5090..64821691481560.9526467-UTR-H-paniculata_contig8260:5090..6482Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8260 5091..6482 -
1622931037.2585814-UTR-H-paniculata_contig8260:8792..88271622931037.2585814-UTR-H-paniculata_contig8260:8792..8827Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8260 8793..8827 -
1691481561.0040126-UTR-H-paniculata_contig8260:8792..88271691481561.0040126-UTR-H-paniculata_contig8260:8792..8827Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8260 8793..8827 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931037.1883125-CDS-H-paniculata_contig8260:6482..65871622931037.1883125-CDS-H-paniculata_contig8260:6482..6587Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8260 6483..6587 -
1691481560.9653578-CDS-H-paniculata_contig8260:6482..65871691481560.9653578-CDS-H-paniculata_contig8260:6482..6587Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8260 6483..6587 -
1622931037.2017887-CDS-H-paniculata_contig8260:7683..78011622931037.2017887-CDS-H-paniculata_contig8260:7683..7801Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8260 7684..7801 -
1691481560.975734-CDS-H-paniculata_contig8260:7683..78011691481560.975734-CDS-H-paniculata_contig8260:7683..7801Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8260 7684..7801 -
1622931037.220817-CDS-H-paniculata_contig8260:8251..84441622931037.220817-CDS-H-paniculata_contig8260:8251..8444Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8260 8252..8444 -
1691481560.9850855-CDS-H-paniculata_contig8260:8251..84441691481560.9850855-CDS-H-paniculata_contig8260:8251..8444Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8260 8252..8444 -
1622931037.2386081-CDS-H-paniculata_contig8260:8701..87921622931037.2386081-CDS-H-paniculata_contig8260:8701..8792Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8260 8702..8792 -
1691481560.9947438-CDS-H-paniculata_contig8260:8701..87921691481560.9947438-CDS-H-paniculata_contig8260:8701..8792Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8260 8702..8792 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8260.16281.1

>prot_H-paniculata_contig8260.16281.1 ID=prot_H-paniculata_contig8260.16281.1|Name=mRNA_H-paniculata_contig8260.16281.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bp
MNSTFFLELKECVDKLAVDPDCRVIIICGSGNMFSAGLDLDEHADVFREM
TGASDSSGEKSGGTSFGSHKDSARTTTANMRFITRMQESLGSLQSCPKPV
ISAVHSGCIGAGVDLVCASDVRLATSDAWFSIKEVDIGLCADLGTLQRLQ
KLIGNDSLVRELVFTARR*
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mRNA from alignment at H-paniculata_contig8260:5091..8827-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8260.16281.1 ID=mRNA_H-paniculata_contig8260.16281.1|Name=mRNA_H-paniculata_contig8260.16281.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3737bp|location=Sequence derived from alignment at H-paniculata_contig8260:5091..8827- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTCGCGATCAACAGACCCACCAAGGCCAACAGCATGAATTCCACGTTC
TTCTTGGAGCTGAAAGAGTGTGTCGACAAGCTTGCCGTCGATCCCGACTG
CCGCGTGATCATCATATGTGGATCAGGTACTGGTGTTCGCGTTTTGTGAC
TTATGACTTGTGACTTTTGTTTGTGCCTATGTCTTCAGCTGTTATTTTTC
CCTTTAATTTATGTCTGTATTCACTTACCCCACGAATAAACCAAGTATCT
ACTTGGGTGGGTTTGTCAGCACACCAAATGCCAAGGTGAGGAGGAATTGA
CATGGCCGGGAACGTGTGCTAGAGGTTACGTCATGTGGTAAAGATATTGC
CTTCTCAAGGAACTTACCCCCCTCCGTGAACAGGTAACATGTTTTCAGCT
GGACTCGACCTCGATGAACACGCCGACGTTTTTCGCGAGATGACGGGAGC
AAGTGATAGTAGCGGCGAAAAAAGCGGCGGGACTAGTTTCGGTTCGCACA
AGGACTCAGCCCGCACGACGACGGCGAACATGCGTTTCATCACCAGGATG
CAGGAGAGCCTGGGCTCCCTACAATCGTGAGCTGTTGGCTAGGTACAGTA
CGGTCATGTGGCTCTCGTAGCATAACTCCTAAAATACACTAGAGGCTCGG
GTATATTATTTTGGATTTTTGGTGGGTAATTTGTAGAGTTACGTACGTCC
TGTCCCATCCCGTCCCTTGGTGTCCACAAGCAGGTGAGAGACCTTTAGTG
GGATGTTGCGATAGAGTTTGTGAAATTAACGAGGGTGGTTATGTTGCAGT
ATGGCAGGGTCCTACTCGATTGACCAGGCCTTCGTATTACCCACCGTATC
TCTGAGTTATCAGGCATGCATGTGTACTGCATGTGTAGTCTCACTTCGTT
GAAAGAAAGTTGCACACCGCACGCCTCAACAATTTTGTCACGAATATTTT
TCCGCTTATGTTTCAACAATTCTCACATCCCAATCCGTCCCGTTGTGCGA
AATATTGCCGTGTTTTCCCCCCCAAGATGCCCAAAGCCAGTTATTTCGGC
GGTACACTCGGGGTGCATAGGTGCAGGGGTGGACCTTGTATGTGCTTCGG
ACGTTCGGCTGGCAACATCGGATGCTTGGTTTTCCATTAAGGAGGCGAGC
ATTTTTATTATCGGTCCTTTTTGTTGTGTTGTATACTGTTGATATCTTGG
TTTCTTTTACATTTTTCTGTTTTTCACGTGCACAAAAAATAAACGATTTC
CTTCACGTTTTTGACCTCCGTCCACGAGTATGGCATGAAAAACATGACTA
TAACCCCCTCTCCCCCCCCTTTCTTTTGGAGTTCTATTTTAGCTGTAGAT
ATATGCTTGGAGACGGCCTAAATTTGTGGCATTTAACGGAAGCTGGTACG
TTTGGAGCAGCGTTAGCTTTAGCGAGTGGTGATGCAAACAAAAAAGCACT
CATTCCATGCGCATAGATACCCGGAGCAATGGAACATGACAATCATTACG
CTGAAGACGATGCGCACAAGTGCATTTTGGATCTATTTTCCCCGACCATC
AAAGCATCCGACACACATTTTAGATACTGTGGAGATGCGATTGCCTGTCC
GTTTAGAAGGCCCTCCGTGTTCATGGTAGTTACTCGTCCTGCAATTGTAT
GGGCCGAATCTTGTTTCCCGTGAAGCTATCGGCTCCTGCGGACGCCTAGA
GTGGACCCCTCGCCCCCATGCGTACTTGGAGTATCTGATGAATCAATTCG
CTGTAGCCTAGCTCCATTTCCAATGACGGCTGAAGCGATATAATAATACT
CGACTGACTGATCAGTTCTATACGGAGCTTACTTATTTATTCATGTACGC
AGCTATTTGCCTGCTCTCGCTCAAGACTAAATCCTAGATAGTAAGGGCCC
GGTATGCACAAAAAACGATCCTTTTTGGGCGCGAGATATGCTCACCGTAT
GGCTATCTAAAGCGGATGGAGCAATCTGTAGACGTGCTCGTATTGTCATT
TTTTGTCGACAGGTTTTGAGGGAAAATGTCTGCCGGCCGATACAAGGTCC
GGTTCCGAAGCGGCTGAAGGCCCAAGCTCTGTCCGCGATGAATGGATAAA
TAACTGACTACAGTGCTGCACGATGAGCGCGTTGAGTTTTTGCTCTTGGC
GATGGATCCTTTTTTCACCTTGTTTTTTTATAGTATACTGTTATATACCA
TAGTATTTTTTCGGGGGTGCTGGACTTTGCTATTTCTCAGGTAGATATCG
GCCTGTGCGCTGACCTGGGGACGTTGCAACGGCTGCAGAAGCTGATCGGA
AACGATTCTCTAGTTCGGGAACTCGTCTTCACGGCGAGAAGGTGAGCGGC
GTTGTTCTACTATTCTAACTAGAGTAGTCTCGAGCGAAAAACCTATTTTT
ACCACTTGGTCGTATACCCGCCCCCACAAATCGATTTTTTGCTGATATCT
ACGTGTGTTTGCTTGTTTTCGTTTTTGGTATACCTCTGTGTTGTCCTCTT
GAGTATGCATGGTGCGGTGCGCTTAAGCCTCCCCATTATTCGGGGAGATG
GGATCTCTCTACTTTGCTGTACTTAGCTGCACTCCAATGTGCCCCGTTGC
GGGGCAGTCTCCCCTACGTGCAGGGCGTCAAGAATGCGATGAACCGGCGG
GATGCTTTATGAACCACACCCTAATTACTACCGTAGCAGTTGCGTCAATA
CGCGCCGCAAGAAAACTTGAATAAGAGATGCTCAGAAAATGTTTCGAACC
GATGATGTAGTTTCACCGAGATATCGTGCTCTGACTGTGAAACCTGCACC
GGTATAGGCACAGATAAATACACCGTGCTGGTATCAACGACACGACTTTT
AAAGGAAAGCTTCCGTCATCTCTTTCTGTCGTTGTTCAGTCAACCCCGGT
GCTTCGTTTCCCGCCTACCCTTATCCTATCCTATTACATTTGGCTTGCGT
CGTTTTTTTGGTTTTTTTTCGTTGGACAGATTTTCTGCTGCTGAGGCGTT
GGCGGCTGGATTCTTGAGCACTACTCTTCACAGCAAGTAGGATGCCAAGA
AGATGACTATTGATTGTATGCTTCGTTCGTCGTGTCTTTCGTTGGTTGTT
TACTTTCTGTCTGTTTGTTTGTTTGTTCATGGCCGATTTATTTTGTACGC
TTTTTTCACAGTGCCTGTGGTACCTCCGTCCCATAAATGAAATAAGGTAC
TTGTGGTTGTCGGAACACCTGAAAAAAAGGTAACCCGATTGTTTCTGTTG
GTTGTTATTTAATAATCCCGAAAAAAAATCAAAATTTCGAGTGAGTTCCG
TTGACATTCAAAGATGTACTGCGCACATCGGAAGAGGAAGAATTTTTTTG
GCGAAATCCCTTCATTTTTTTTTATTTTTTTCTTGTTTTTTTCTTTTTCG
TGTTGTGAATAGTCACGTGCTCGGGCGTAATTTTGGTTGGTTAACGATAT
GGTGTTTGTTTGCTGGGGCGCTCCGAAATGACAATTACTGTGTTTTTGGG
GGTCCTTCTTGATTACAAACGGGACGTGACTACCACGTGATGACATGTTA
TGGTGACGAAAAGACGTTCCTCCGTTCCCCCAAAAAATAACGCTTCTTCA
CAGGGAGGAGCTATTGGATCACGCTCACCAGCTGGGGTCCCAGATGGCCT
CGCGTAGTCCAGTGGCCATACAAGGAAGCAAGGTTAATCTCAATTACGGA
AGGGACTACCCCACGGCCCAAGCTCTGCAGTATCAGG
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Coding sequence (CDS) from alignment at H-paniculata_contig8260:5091..8827-

>mRNA_H-paniculata_contig8260.16281.1 ID=mRNA_H-paniculata_contig8260.16281.1|Name=mRNA_H-paniculata_contig8260.16281.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1014bp|location=Sequence derived from alignment at H-paniculata_contig8260:5091..8827- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAATTCCACGTTCTTCTTGGAGCTGAAAGAGTGTGTCGACAAGCTTGC
CGTCGATCCCGACTGCCGCGTGATCATCATATGTGGATCAGATGAATTCC
ACGTTCTTCTTGGAGCTGAAAGAGTGTGTCGACAAGCTTGCCGTCGATCC
CGACTGCCGCGTGATCATCATATGTGGATCAGGTAACATGTTTTCAGCTG
GACTCGACCTCGATGAACACGCCGACGTTTTTCGCGAGATGACGGGAGCA
AGTGATAGTAGCGGCGAAAAAAGCGGCGGGACTAGTTTCGGTTCGCACAA
GGACTCAGCCCGCACGACGACGGCGAACATGCGTTTCATCACCAGGATGC
AGGAGAGCCTGGGCTCCCTACAATCGTAACATGTTTTCAGCTGGACTCGA
CCTCGATGAACACGCCGACGTTTTTCGCGAGATGACGGGAGCAAGTGATA
GTAGCGGCGAAAAAAGCGGCGGGACTAGTTTCGGTTCGCACAAGGACTCA
GCCCGCACGACGACGGCGAACATGCGTTTCATCACCAGGATGCAGGAGAG
CCTGGGCTCCCTACAATCATGCCCAAAGCCAGTTATTTCGGCGGTACACT
CGGGGTGCATAGGTGCAGGGGTGGACCTTGTATGTGCTTCGGACGTTCGG
CTGGCAACATCGGATGCTTGGTTTTCCATTAAGGAGATGCCCAAAGCCAG
TTATTTCGGCGGTACACTCGGGGTGCATAGGTGCAGGGGTGGACCTTGTA
TGTGCTTCGGACGTTCGGCTGGCAACATCGGATGCTTGGTTTTCCATTAA
GGAGGTAGATATCGGCCTGTGCGCTGACCTGGGGACGTTGCAACGGCTGC
AGAAGCTGATCGGAAACGATTCTCTAGTTCGGGAACTCGTCTTCACGGCG
AGAAGGTGAGTAGATATCGGCCTGTGCGCTGACCTGGGGACGTTGCAACG
GCTGCAGAAGCTGATCGGAAACGATTCTCTAGTTCGGGAACTCGTCTTCA
CGGCGAGAAGGTGA
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