mRNA_H-paniculata_contig8255.16275.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8255.16275.1
Unique NamemRNA_H-paniculata_contig8255.16275.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig8255.16275.1 vs. uniprot
Match: D8LBF4_ECTSI (Dihydrolipoyl dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBF4_ECTSI)

HSP 1 Score: 881 bits (2277), Expect = 0.000e+0
Identity = 442/502 (88.05%), Postives = 468/502 (93.23%), Query Frame = 3
Query:   60 MTHVALRMRSSPSLVHRFRPISFMGCTRALSASSEPYDVVVVGGGPGGYVAAIKSSQLRLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLFHEAAHNMAAHGISTGDVSINVAKMMENKASKVEGLTGGIEYLCKKYEVDYVKGFGKLGGPNTVNVDLTEGGKQSLETKNILIATGSEVTPLPPVPVDNAQGKIVDSTGALDLKEVPEKLVLIGGGVIGLEMGSVWSRLGSKVTVVEFLDRVCPSMDQEITKAFTRVLKKQGLKFKFKTKVVSSEVTSSGVKLTMEPAAGGDQTTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDSRFRTAVPSIYAIGDCIAGPMLAHKAEEEGIACVETIAGFAGHVNYDAIPGVVYTHPELAEVGKTEEALKEAGVAYNKGVFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1565
            M  + +  R++  LV   R    +GC RALSAS++PYDVVVVGGGPGGYVAAIKSSQL LKTAVVESRGKLGGTCLNVGCIPSKALLHSSHL+HEA HNMA+HGIS GDVS++V KMMENK SKVEGLTGGIEYLCKKY+VDY+KGFGKLGGPNTVNVDLTEGG QSLET+NI+IATGSEVTPLPPVPVDNAQ KIVDSTGAL+LKEVP+ LVLIGGGVIGLEMGSVW+RLGSKVTVVEFLDRVCPSMD EITKAFTRVLKKQGLKFK KTKV SSEVT SGVKLTMEP+ GG  +TM+ADVVLVATGRRPFTANLGCDELGISLDKMGRIEVD  FRTAVPS++AIGDCI+GPMLAHKAEEEGIACVE IAGFAGHVNYDAIPGVVYT+PE+AEVGKTEEALKEAGVAYNKG FPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF
Sbjct:    1 MAQIGVHFRATRQLVGTVRASPLLGCRRALSASADPYDVVVVGGGPGGYVAAIKSSQLGLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLYHEATHNMASHGISVGDVSMDVGKMMENKDSKVEGLTGGIEYLCKKYKVDYIKGFGKLGGPNTVNVDLTEGGLQSLETRNIVIATGSEVTPLPPVPVDNAQQKIVDSTGALELKEVPKSLVLIGGGVIGLEMGSVWARLGSKVTVVEFLDRVCPSMDHEITKAFTRVLKKQGLKFKLKTKVTSSEVTESGVKLTMEPSKGGASSTMEADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDPHFRTAVPSVFAIGDCISGPMLAHKAEEEGIACVEGIAGFAGHVNYDAIPGVVYTYPEVAEVGKTEEALKEAGVAYNKGTFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 502          
BLAST of mRNA_H-paniculata_contig8255.16275.1 vs. uniprot
Match: A0A835YXI3_9STRA (Dihydrolipoyl dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXI3_9STRA)

HSP 1 Score: 760 bits (1963), Expect = 9.440e-271
Identity = 375/472 (79.45%), Postives = 414/472 (87.71%), Query Frame = 3
Query:  150 SASSEPYDVVVVGGGPGGYVAAIKSSQLRLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLFHEAAHNMAAHGISTGDVSINVAKMMENKASKVEGLTGGIEYLCKKYEVDYVKGFGKLGGPNTVNVDLTEGGKQSLETKNILIATGSEVTPLPPVPVDNAQGKIVDSTGALDLKEVPEKLVLIGGGVIGLEMGSVWSRLGSKVTVVEFLDRVCPSMDQEITKAFTRVLKKQGLKFKFKTKVVSSEVTSSGVKLTMEPAAGGDQTTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDSRFRTAVPSIYAIGDCIAGPMLAHKAEEEGIACVETIAGFAGHVNYDAIPGVVYTHPELAEVGKTEEALKEAGVAYNKGVFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1565
            +A+   YDVVVVGGGPGGYVAAIK+SQL LKTA VE+RG+LGGTCLNVGCIPSKALLHSSHL+H+  H+ A HGIS GD+SI+V+KMM NK+  VEGLTGGIEYL KKY+VDY  GFGKL   NTV+VDL  GG  SL+TKNILIATGSEV PLPPVPVDNA GKIVDSTGAL+LKEVP+KL +IGGG IGLEMGSVW+RLGS+VTV+EFLDRVCP+MDQEITK FTRVLKKQG  FK  TKV +SEVT +GVKLT+EP+ GG  TT +ADVVLV+TGRRPFT  LGC ELGI +DK+GRIEVDS FRTAVPS+YA GDCIAGPMLAHKAEEEGIACVE IAGFAGHVNYD IPGVVYTHPE+A VGKTEE LK A V+YNKG FPFSANSRA C G  DG++KIL+DKETDRILG HI+GPNAGE+I E VLAMEYGASSED+ARTCHAHPTLSEALKEACMATYDKPIHF
Sbjct:    3 AAADGEYDVVVVGGGPGGYVAAIKASQLGLKTACVEARGRLGGTCLNVGCIPSKALLHSSHLYHDVKHDAARHGISVGDISIDVSKMMANKSKAVEGLTGGIEYLFKKYKVDYHVGFGKLADANTVSVDLNAGGTTSLKTKNILIATGSEVAPLPPVPVDNAAGKIVDSTGALELKEVPKKLAVIGGGYIGLEMGSVWNRLGSEVTVIEFLDRVCPAMDQEITKNFTRVLKKQGFAFKLNTKVTASEVTDTGVKLTLEPSKGGKATTFEADVVLVSTGRRPFTQGLGCAELGIKMDKIGRIEVDSHFRTAVPSVYAFGDCIAGPMLAHKAEEEGIACVEGIAGFAGHVNYDCIPGVVYTHPEVATVGKTEEELKAANVSYNKGTFPFSANSRARCTGSADGLIKILADKETDRILGVHIMGPNAGELIGEAVLAMEYGASSEDVARTCHAHPTLSEALKEACMATYDKPIHF 474          
BLAST of mRNA_H-paniculata_contig8255.16275.1 vs. uniprot
Match: A0A7S2PJC3_9STRA (Dihydrolipoyl dehydrogenase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PJC3_9STRA)

HSP 1 Score: 697 bits (1799), Expect = 2.180e-245
Identity = 352/488 (72.13%), Postives = 404/488 (82.79%), Query Frame = 3
Query:  123 SFMGCTRALSASSEP----YDVVVVGGGPGGYVAAIKSSQLRLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLFHEAAHNMAAHGIS-TGDVSINVAKMMENKASKVEGLTGGIEYLCKKYEVDYVKGFGKLGGPNTVNVDLTEGGKQSLETKNILIATGSEVTPLPPVPVDNAQGKIVDSTGALDLKEVPEKLVLIGGGVIGLEMGSVWSRLGSKVTVVEFLDRVCPSMDQEITKAFTRVLKKQGLKFKFKTKVVSSEVTSSGVKLTMEPAAGGDQTTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDSRFRTAVPSIYAIGDCIAGPMLAHKAEEEGIACVETIAGFAGHVNYDAIPGVVYTHPELAEVGKTEEALKEAGVAYNKGVFPFSANSRASC--VGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1565
            S  G T +  ++S P    YDVVVVGGGPGGYVAAIK+ Q+ LKTA VE RG LGGTCLNVGCIPSKALL+SSH FH+A H+ A HGI+ +G+V+++VAKM+E KA  V+GLTGGIE+L KK++VDY KG G L GPN V+V L +GGK+SL+TKNI+IATGSEVTPLPPVPVDNA GKIVDSTGALD+ ++P K+ +IGGGVIGLEMGSVWSRLG+ VTV+EF+D +CP+MD+E+TK F   LKKQG KFK KTKVV SEV   GV +T EP+ GGDQ T + DVVLVATGRRP+T  LG + LGI  DK+GRI+VDS FRTAVPSIYAIGDCI GPMLAHKAEEEGIA VETIAGFAGHVNYDAIPGV+YT PE+A VGKTEE LKEA V +NKG FPF ANSRA     G+ +G VKIL+DK TD+ILG HI+GPNAGEMIAE V+ MEYGASSEDIARTCHAHPTLSEA KEACM  YDKPIHF
Sbjct:   16 SSRGGTASFFSTSTPLQDQYDVVVVGGGPGGYVAAIKAGQMGLKTACVEMRGSLGGTCLNVGCIPSKALLNSSHHFHDAKHHFADHGITISGEVTMDVAKMLEAKAKTVQGLTGGIEHLLKKHKVDYFKGKGSLSGPNGVDVTLNDGGKESLDTKNIIIATGSEVTPLPPVPVDNAGGKIVDSTGALDINKIPNKMAVIGGGVIGLEMGSVWSRLGTDVTVIEFMDGLCPAMDKELTKKFQTTLKKQGFKFKLKTKVVKSEVVGDGVAITTEPSKGGDQKTENYDVVLVATGRRPYTDGLGLESLGIQTDKLGRIDVDSHFRTAVPSIYAIGDCIDGPMLAHKAEEEGIAAVETIAGFAGHVNYDAIPGVIYTFPEVASVGKTEEELKEANVQFNKGTFPFQANSRARANGTGNAEGFVKILADKSTDKILGVHIMGPNAGEMIAEGVMGMEYGASSEDIARTCHAHPTLSEAFKEACMDAYDKPIHF 503          
BLAST of mRNA_H-paniculata_contig8255.16275.1 vs. uniprot
Match: A0A7S1UDP3_9STRA (Dihydrolipoyl dehydrogenase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDP3_9STRA)

HSP 1 Score: 699 bits (1805), Expect = 3.030e-245
Identity = 358/521 (68.71%), Postives = 406/521 (77.93%), Query Frame = 3
Query:   12 PFVRQAERVNL*KFDVMTH-VALRMRSSPSLVHRFRPISFMGCTRALSASS---EPYDVVVVGGGPGGYVAAIKSSQLRLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLFHEAAHNMAAHGISTGDVSINVAKMMENKASKVEGLTGGIEYLCKKYEVDYVKGFGKLGGPNTVNVDLTEGGKQSLETKNILIATGSEVTPLPPVPVDNAQGKIVDSTGALDLKEVPEKLVLIGGGVIGLEMGSVWSRLGSKVTVVEFLDRVCPSMDQEITKAFTRVLKKQGLKFKFKTKVVSSEVTSSGVKLTMEPAAGGDQTTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDSRFRTAVPSIYAIGDCIAGPMLAHKAEEEGIACVETIAGFAGHVNYDAIPGVVYTHPELAEVGKTEEALKEAGVAYNKGVFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIH 1562
            P +  A R N  +F+   H   + MR+        R        R  + S    + YD+VVVGGGPGGYV AIK+SQL LKTA VE RG LGGTCLNVGCIPSKALLHSSHL+ EA H+   HGI    V +++  MM NKA+ V GLTGGIEYL KKY VDYVKG+G L    TV+V L EGG Q+L TKNI+IATGSEVTPLPPVPVDNA  KIVDSTGAL+L+ VPEK+V++G GVIGLEMGSVW RLGS+VTVVEFLDR+ P +D+E+ K F  +LKKQG+KFK KTKV SSEVT +GV LTMEP+ GGD  T DADVVLVATGR+PFT NLG + LGI  D++GRIEVD  FRT VP+++AIGD I GPMLAHKAEEEGIACVE IAGFAGHVNYD IPGVVYT PELA VGKTE+ LKEAGV YNKG FPFSANSRA  V   +G +K+L+D ETDRILG HI+GPNAGEMI+E VL MEYGASSEDIARTCHAHPTLSEALKEACMAT+DKPIH
Sbjct:   49 PNLPLARRNNERQFEARQHHTTVTMRALVPATATARRGGVAAAARFFTGSRVVLDEYDLVVVGGGPGGYVGAIKASQLGLKTACVEMRGSLGGTCLNVGCIPSKALLHSSHLYEEALHDFEGHGIKVSGVELDLPAMMANKATAVTGLTGGIEYLFKKYGVDYVKGYGSLSSATTVDVALNEGGSQTLSTKNIMIATGSEVTPLPPVPVDNAGKKIVDSTGALELESVPEKMVVVGAGVIGLEMGSVWRRLGSEVTVVEFLDRITPGIDKEVAKKFQSILKKQGMKFKLKTKVTSSEVTDAGVTLTMEPSKGGDAETFDADVVLVATGRKPFTENLGLENLGIETDRLGRIEVDDHFRTKVPNVFAIGDVIDGPMLAHKAEEEGIACVENIAGFAGHVNYDVIPGVVYTMPELAVVGKTEDELKEAGVKYNKGSFPFSANSRARAVNTPEGFIKVLADAETDRILGVHIIGPNAGEMISEAVLGMEYGASSEDIARTCHAHPTLSEALKEACMATFDKPIH 569          
BLAST of mRNA_H-paniculata_contig8255.16275.1 vs. uniprot
Match: K0RDB2_THAOC (Dihydrolipoyl dehydrogenase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RDB2_THAOC)

HSP 1 Score: 689 bits (1777), Expect = 6.830e-242
Identity = 343/470 (72.98%), Postives = 390/470 (82.98%), Query Frame = 3
Query:  162 EPYDVVVVGGGPGGYVAAIKSSQLRLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLFHEAAHNMAAHGISTGDVSINVAKMMENKASKVEGLTGGIEYLCKKYEVDYVKGFGKLGGPNTVNVDLTEGGKQSLETKNILIATGSEVTPLPPVPVDNAQGKIVDSTGALDLKEVPEKLVLIGGGVIGLEMGSVWSRLGSKVTVVEFLDRVCPSMDQEITKAFTRVLKKQGLKFKFKTKVVSSEVTSSGVKLTMEPAAGGDQTTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDSRFRTAVPSIYAIGDCIAGPMLAHKAEEEGIACVETIAGFAGHVNYDAIPGVVYTHPELAEVGKTEEALKEAGVAYNKGVFPFSANSRA--SCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1565
            + YDVVVVGGGPGGYVAAIK+ Q+ LKTA VE RG LGGTCLNVGCIPSKALL SSH +H+A H  A HGI TGDVS++VAKMM+ KA  V+GLTGGIE+L KK++VDY KG G L GPN V V L +GG +S++ KNI++ATGSEVTPLPPVPVDN  GKIVDSTGALD+ ++P  + +IGGGVIGLEMGSVWSRLG+ VTV+EF+DR+CP+MDQE+TK F   LKKQG KFK KTKV  SEV    V +T EP+ GGD TT + DVVLVATGRRP+T  LG + LGI  DK+GRIEVDS FRTAVPSIYAIGDCI GPMLAHKAEEEGIA VETIAGFAGHVNYDAIPGV+YT PE+A VGKTEE LKEAGV Y KG FPF+ANSRA  +  G+ +G VKIL+DK TD++LG HI+GPNAGEMIAE VL MEYGASSED+ARTCHAHPTLSEA KEACM  +DKPIHF
Sbjct:   44 DQYDVVVVGGGPGGYVAAIKAGQMGLKTACVEMRGTLGGTCLNVGCIPSKALLTSSHHYHDAKHYFAEHGIVTGDVSMDVAKMMDAKAKTVQGLTGGIEHLLKKHKVDYFKGKGSLTGPNGVAVSLNDGGSESIDAKNIILATGSEVTPLPPVPVDNQGGKIVDSTGALDIAKIPSSMAVIGGGVIGLEMGSVWSRLGTDVTVIEFMDRLCPAMDQELTKKFQTTLKKQGFKFKLKTKVTKSEVQGDSVAITTEPSKGGDATTTNYDVVLVATGRRPYTDGLGLENLGIQTDKLGRIEVDSHFRTAVPSIYAIGDCIDGPMLAHKAEEEGIAAVETIAGFAGHVNYDAIPGVIYTFPEVASVGKTEEELKEAGVEYVKGTFPFAANSRARANATGNGEGFVKILADKATDKMLGVHIMGPNAGEMIAEGVLGMEYGASSEDVARTCHAHPTLSEAFKEACMDAHDKPIHF 513          
BLAST of mRNA_H-paniculata_contig8255.16275.1 vs. uniprot
Match: A0A7R9W9U4_9STRA (Dihydrolipoyl dehydrogenase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9U4_9STRA)

HSP 1 Score: 688 bits (1775), Expect = 7.670e-242
Identity = 343/472 (72.67%), Postives = 394/472 (83.47%), Query Frame = 3
Query:  153 ASSEPYDVVVVGGGPGGYVAAIKSSQLRLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLFHEAAHNMAAHGIST-GDVSINVAKMMENKASKVEGLTGGIEYLCKKYEVDYVKGFGKLGGPNTVNVDLTEGGKQSLETKNILIATGSEVTPLPPVPVDNAQGKIVDSTGALDLKEVPEKLVLIGGGVIGLEMGSVWSRLGSKVTVVEFLDRVCPSMDQEITKAFTRVLKKQGLKFKFKTKVVSSEVTSSGVKLTMEPAAGGDQTTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDSRFRTAVPSIYAIGDCIAGPMLAHKAEEEGIACVETIAGFAGHVNYDAIPGVVYTHPELAEVGKTEEALKEAGVAYNKGVFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1565
            A  + YDVVVVGGGPGGYVAAIK+ QL LKTA VE RG LGGTCLNVGCIPSKALL SSH +H+   + A HGI   G+V ++V KM E+KA  V+GLTGGIE+L KK++VDY KG G + GPN V+V L EGG ++L+TKN++IATGSEVTPLPPVPVDN  GKIVDSTGAL++ E+P+ + +IGGGVIGLEMGSVWSRLG++VTVVEF+DR+CP+MDQE+TK F   LKKQG KF+ KTKV+SS V   GV LT E A GG + T   D+VLVATGRRP+T  LG + LGI  DK+GRIEVD  F+TAVPSIYAIGDCI GPMLAHKAEEEGIA +ETIAGFAGHVNYDAIPGV+YT+PE+A VGKTEE LKEAGV+++KG FPF+ANSRA   GD +G VKIL+DKETDRILGAHI+GPNAGEMIAE VL MEYGASSEDIARTCHAHPTLSEA KEACM TYDKPIHF
Sbjct:   26 ALGDQYDVVVVGGGPGGYVAAIKAGQLGLKTACVEMRGTLGGTCLNVGCIPSKALLQSSHHYHDVKTHFADHGIQIDGEVKMDVGKMQESKAGTVKGLTGGIEHLFKKHKVDYFKGKGSISGPNAVSVALNEGGNETLDTKNVVIATGSEVTPLPPVPVDNDGGKIVDSTGALEISEIPKTMAVIGGGVIGLEMGSVWSRLGTEVTVVEFMDRLCPAMDQELTKKFQTTLKKQGFKFQLKTKVMSSVVEGDGVVLTTEAAKGGKEKTEKYDIVLVATGRRPYTDGLGLEALGIQTDKLGRIEVDEHFKTAVPSIYAIGDCIDGPMLAHKAEEEGIAAIETIAGFAGHVNYDAIPGVIYTYPEVASVGKTEEELKEAGVSFSKGSFPFAANSRARANGDTEGFVKILADKETDRILGAHIIGPNAGEMIAEAVLGMEYGASSEDIARTCHAHPTLSEAFKEACMDTYDKPIHF 497          
BLAST of mRNA_H-paniculata_contig8255.16275.1 vs. uniprot
Match: A0A1E7EUM2_9STRA (Dihydrolipoyl dehydrogenase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUM2_9STRA)

HSP 1 Score: 687 bits (1772), Expect = 2.350e-241
Identity = 339/489 (69.33%), Postives = 403/489 (82.41%), Query Frame = 3
Query:  102 VHRFRPISFMGCTRALSASSEPYDVVVVGGGPGGYVAAIKSSQLRLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLFHEAAHNMAAHGIS-TGDVSINVAKMMENKASKVEGLTGGIEYLCKKYEVDYVKGFGKLGGPNTVNVDLTEGGKQSLETKNILIATGSEVTPLPPVPVDNAQGKIVDSTGALDLKEVPEKLVLIGGGVIGLEMGSVWSRLGSKVTVVEFLDRVCPSMDQEITKAFTRVLKKQGLKFKFKTKVVSSEVTSSGVKLTMEPAAGGDQTTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDSRFRTAVPSIYAIGDCIAGPMLAHKAEEEGIACVETIAGFAGHVNYDAIPGVVYTHPELAEVGKTEEALKEAGVAYNKGVFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1565
            + R R  ++   ++  +  ++ YDVV+VGGGPGGYVAAIKS+QL +KTA VE RG+LGGTCLNVGCIPSKALL SSH +H+A H+ A HGI   GD+S+++ KM + K+  VEGLTGGIEYL KKY VDYVKG GK+ GPN V V LT+GG +SL+TKNI+IA+GSEVTPLPPVPVDNA GK+VDSTGAL++  +P+K+ ++GGGVIGLEMGSVWSRLG++VTV+EFLDR+ P  D E+ K F  +LKKQG KF  KTKVV S V   GV LT EP+ GGD      DVVLV+TGRRP+T  LG +++GI  DK+GRIEVDS F+TAVPSI+AIGD I+GPMLAHKAEEEGIACVETIAGFAGHV YDAIPGVVYT+PE+A+VGKTEE LKEAG+AYN G FPF+ANSRA   G  DG VK+L+DKETD+ILG HI+GPNAGEMIAE V+A+EYGASSED+ARTCHAHPTLSEA KEACM TYD+PIHF
Sbjct:   11 LQRNRSTAWRSFSKTTATFADQYDVVIVGGGPGGYVAAIKSAQLGMKTACVEMRGRLGGTCLNVGCIPSKALLQSSHHYHDAKHHFADHGIVFDGDLSMDIDKMQDTKSKTVEGLTGGIEYLLKKYGVDYVKGKGKITGPNGVEVALTDGGSESLDTKNIIIASGSEVTPLPPVPVDNAGGKVVDSTGALEIGTIPKKMAVVGGGVIGLEMGSVWSRLGAEVTVIEFLDRILPMNDTEVAKKFQTILKKQGFKFNLKTKVVKSVVEDDGVVLTTEPSKGGDAKEEKFDVVLVSTGRRPYTEGLGLEDVGIQTDKLGRIEVDSHFKTAVPSIFAIGDAISGPMLAHKAEEEGIACVETIAGFAGHVCYDAIPGVVYTYPEVADVGKTEEELKEAGIAYNVGNFPFAANSRARANGSADGFVKVLADKETDKILGVHIIGPNAGEMIAEAVIAIEYGASSEDMARTCHAHPTLSEAFKEACMDTYDQPIHF 499          
BLAST of mRNA_H-paniculata_contig8255.16275.1 vs. uniprot
Match: A0A7S3H026_9STRA (Dihydrolipoyl dehydrogenase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H026_9STRA)

HSP 1 Score: 686 bits (1769), Expect = 6.010e-241
Identity = 340/483 (70.39%), Postives = 398/483 (82.40%), Query Frame = 3
Query:  117 PISFMGCTRALSASSEPYDVVVVGGGPGGYVAAIKSSQLRLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLFHEAAHNMAAHGISTGDVSINVAKMMENKASKVEGLTGGIEYLCKKYEVDYVKGFGKLGGPNTVNVDLTEGGKQSLETKNILIATGSEVTPLPPVPVDNAQGKIVDSTGALDLKEVPEKLVLIGGGVIGLEMGSVWSRLGSKVTVVEFLDRVCPSMDQEITKAFTRVLKKQGLKFKFKTKVVSSEVTSSGVKLTMEPAAGGDQTTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDSRFRTAVPSIYAIGDCIAGPMLAHKAEEEGIACVETIAGFAGHVNYDAIPGVVYTHPELAEVGKTEEALKEAGVAYNKGVFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1565
            P +++ C  + S + E YDVVVVGGGPGGYVAAIK++QL LKTA VESRG LGGTCLNVGCIPSKALLHS+HL   A  + A HGI+   +  ++ KMM+NK   V+GLTGGIE L KK +V Y+KGFGKL GPN+V+VDLT GG Q++E KNI++A GSEV+PLP   VDNA  +IVDSTGALDL EVP+KLV++GGGVIGLEMGSVW RLGS+VTVVEFLD + P MD+EIT++F ++LKKQG  F   TKV  ++V  +GVKLT+EP+AGG  T +DADVVLV+TGRRPFT N+G + LGI  DK+GRI+VD  F+T VPSI+AIGD I GPMLAHKAEEEGIACVE IAGFAGHVNYDAIPGV+YTHPE+A VG+TEE L +AG+ Y KG FPF ANSRA    D DG+VK+L+DKETD+ILG HI+G NAGEMIAE VLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF
Sbjct:   14 PKNYVKCFSSSSVAGEKYDVVVVGGGPGGYVAAIKAAQLGLKTACVESRGSLGGTCLNVGCIPSKALLHSTHLLEHAQKDFAHHGITVSGIQYDLKKMMDNKNKVVKGLTGGIEMLFKKNKVTYIKGFGKLAGPNSVSVDLTAGGSQTVEAKNIILAVGSEVSPLPTAVVDNAGKRIVDSTGALDLTEVPKKLVVVGGGVIGLEMGSVWRRLGSEVTVVEFLDTITPGMDKEITQSFLKILKKQGFNFMLNTKVTGTKVEGNGVKLTVEPSAGGAATQLDADVVLVSTGRRPFTKNIGLEALGIETDKIGRIKVDHHFQTKVPSIFAIGDAIDGPMLAHKAEEEGIACVENIAGFAGHVNYDAIPGVIYTHPEVASVGQTEEQLIKAGIKYTKGTFPFQANSRARATLDADGLVKVLADKETDKILGMHIIGSNAGEMIAEGVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 496          
BLAST of mRNA_H-paniculata_contig8255.16275.1 vs. uniprot
Match: A0A448Z8U6_9STRA (Dihydrolipoyl dehydrogenase n=4 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z8U6_9STRA)

HSP 1 Score: 685 bits (1767), Expect = 1.400e-240
Identity = 342/491 (69.65%), Postives = 400/491 (81.47%), Query Frame = 3
Query:   96 SLVHRFRPISFMGCTRALSASSEPYDVVVVGGGPGGYVAAIKSSQLRLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLFHEAAHNMAAHGIST-GDVSINVAKMMENKASKVEGLTGGIEYLCKKYEVDYVKGFGKLGGPNTVNVDLTEGGKQSLETKNILIATGSEVTPLPPVPVDNAQGKIVDSTGALDLKEVPEKLVLIGGGVIGLEMGSVWSRLGSKVTVVEFLDRVCPSMDQEITKAFTRVLKKQGLKFKFKTKVVSSEVTSSGVKLTMEPAAGGDQTTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDSRFRTAVPSIYAIGDCIAGPMLAHKAEEEGIACVETIAGFAGHVNYDAIPGVVYTHPELAEVGKTEEALKEAGVAYNKGVFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1565
            S+  R RP +    +   +  ++ YDVVV+GGGPGGYVAAIKS+QL LKTA VE RG+LGGTCLNVGCIPSKALL S+H +H+A H+ A HG+   G++S++V KM + KA  VEGLTGGIEYL KKY V+Y KG G++ GPN V V L EGG +SL+TKNILIATGSEVTPLPPVPVDN  GKIVDSTGAL+++++PEK+ ++GGGVIGLEMGSVW+RLG++VTV+EFLDR+ PS D EI K F   LKKQG KF  KTKV  S V   GV LT EPA GGD      DVVLV+TGRRP+T  LG +++GI  D++GRIEVDS F+TAVPSIYAIGDCI+GPMLAHKAEEEGIA VETIAGFAGHV YDAIPGVVYT+PE+A VGK+EE LKEAG+AYN G FPFSANSRA   G  +G VK+L+DKETD+ILG HI+GPNAGEMIAE V+A+EYGASSED+ARTCHAHPTLSEA KEACM TYDKPIHF
Sbjct:   10 SVFSRTRPTALRSFSNTSATLADQYDVVVIGGGPGGYVAAIKSAQLGLKTACVEMRGRLGGTCLNVGCIPSKALLTSTHHYHDAKHHFADHGVVIDGNISMDVDKMQDTKAKSVEGLTGGIEYLLKKYGVEYHKGKGRITGPNGVEVALNEGGSESLDTKNILIATGSEVTPLPPVPVDNEGGKIVDSTGALEIRKIPEKMAVVGGGVIGLEMGSVWARLGAEVTVIEFLDRILPSNDHEIGKKFQTTLKKQGFKFNLKTKVXKSVVEDDGVVLTTEPAKGGDAKEEKYDVVLVSTGRRPYTEGLGLEDVGIQTDQLGRIEVDSHFKTAVPSIYAIGDCISGPMLAHKAEEEGIAAVETIAGFAGHVCYDAIPGVVYTYPEVANVGKSEEELKEAGIAYNVGNFPFSANSRARANGSSEGFVKVLADKETDQILGVHIIGPNAGEMIAEAVIAIEYGASSEDMARTCHAHPTLSEAFKEACMDTYDKPIHF 500          
BLAST of mRNA_H-paniculata_contig8255.16275.1 vs. uniprot
Match: A0A7R9UB69_9STRA (Dihydrolipoyl dehydrogenase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB69_9STRA)

HSP 1 Score: 685 bits (1767), Expect = 1.800e-240
Identity = 347/497 (69.82%), Postives = 395/497 (79.48%), Query Frame = 3
Query:   90 SPSLVHRFRPISFMGCTRALSA-----SSEPYDVVVVGGGPGGYVAAIKSSQLRLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLFHEAAHNMAAHGISTGDVSINVAKMMENKASKVEGLTGGIEYLCKKYEVDYVKGFGKLGGPNTVNVDLTEGGKQSLETKNILIATGSEVTPLPPVPVDNAQGKIVDSTGALDLKEVPEKLVLIGGGVIGLEMGSVWSRLGSKVTVVEFLDRVCPSMDQEITKAFTRVLKKQGLKFKFKTKVVSSEVTSSGVKLTMEPAAGGDQTTMDADVVLVATGRRPFTANLGCDELGISLDKMGRIEVDSRFRTAVPSIYAIGDCIAGPMLAHKAEEEGIACVETIAGFAGHVNYDAIPGVVYTHPELAEVGKTEEALKEAGVAYNKGVFPFSANSRASCVGDKDGMVKILSDKETDRILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 1565
            SPSLV  F    F   T + S      +++ YD+ V+GGGPGGYVAAIK++QL +KTA VESRG+LGGTCLNVGCIPSKALLHSSHL+ EA H  A HGI    V +++  MM NK   V GLTGGIEYL KKY VDYVKGFG L    TV+V L +GG Q ++TKN++IATGSE TPLPP PVDNA  +IVDSTGAL+L+ VPEK+++IG GVIGLEMGSVW RLG+ VTVVEFLD   P MD EI+K F ++LKKQG+ FK  TKV ++EVTSSGVK+TMEP+ GGD   MD DVVLVATGRRPFT NLG + LGI  D++GRI VD  FRT V  +YAIGD I GPMLAHKAEEEGIA VET+AG+AGHVNYDAIPGV+YT PELA VGKTE+ LKEAGVAYNKG FPF+ANSRA  V   DG +K+LSD  TDRILG HI+GPNAGEMI+E VL MEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF
Sbjct:   11 SPSLVCLFPSFLFACLTFSPSLLLKLPTTDDYDICVIGGGPGGYVAAIKAAQLGMKTACVESRGRLGGTCLNVGCIPSKALLHSSHLYEEANHEFAGHGIKLSGVELDLPTMMANKQDAVVGLTGGIEYLFKKYGVDYVKGFGTLQDSQTVDVSLLDGGNQVVKTKNVVIATGSEPTPLPPAPVDNAGKRIVDSTGALELESVPEKMIVIGAGVIGLEMGSVWRRLGADVTVVEFLDHSTPGMDSEISKKFQQILKKQGVNFKLSTKVTNTEVTSSGVKVTMEPSKGGDAEQMDVDVVLVATGRRPFTNNLGLENLGIETDRLGRIPVDDHFRTKVQGVYAIGDVIDGPMLAHKAEEEGIAVVETLAGYAGHVNYDAIPGVIYTMPELANVGKTEDELKEAGVAYNKGTFPFTANSRARAVKTVDGFIKVLSDASTDRILGVHIIGPNAGEMISEAVLGMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPIHF 507          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8255.16275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBF4_ECTSI0.000e+088.05Dihydrolipoyl dehydrogenase n=2 Tax=Ectocarpus Tax... [more]
A0A835YXI3_9STRA9.440e-27179.45Dihydrolipoyl dehydrogenase n=1 Tax=Tribonema minu... [more]
A0A7S2PJC3_9STRA2.180e-24572.13Dihydrolipoyl dehydrogenase n=1 Tax=Skeletonema ma... [more]
A0A7S1UDP3_9STRA3.030e-24568.71Dihydrolipoyl dehydrogenase n=1 Tax=Phaeomonas par... [more]
K0RDB2_THAOC6.830e-24272.98Dihydrolipoyl dehydrogenase n=1 Tax=Thalassiosira ... [more]
A0A7R9W9U4_9STRA7.670e-24272.67Dihydrolipoyl dehydrogenase n=1 Tax=Pseudictyota d... [more]
A0A1E7EUM2_9STRA2.350e-24169.33Dihydrolipoyl dehydrogenase n=1 Tax=Fragilariopsis... [more]
A0A7S3H026_9STRA6.010e-24170.39Dihydrolipoyl dehydrogenase n=1 Tax=Spumella elong... [more]
A0A448Z8U6_9STRA1.400e-24069.65Dihydrolipoyl dehydrogenase n=4 Tax=Pseudo-nitzsch... [more]
A0A7R9UB69_9STRA1.800e-24069.82Dihydrolipoyl dehydrogenase n=2 Tax=Pinguiococcus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8255contigH-paniculata_contig8255:4081..10452 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score692.6
Seed ortholog evalue1.4e-196
Seed eggNOG ortholog159749.K0RDB2
Preferred nameDLD
KEGG rclassRC00004,RC00022,RC00583,RC02742,RC02833,RC02834
KEGG koko:K00382,ko:K17583
KEGG ReactionR00209,R01221,R01698,R03815,R07618,R08549
KEGG Pathwayko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00009,M00011,M00036,M00307,M00532
Hectar predicted targeting categorymitochondrion
GOsGO:0000003,GO:0000166,GO:0001505,GO:0001669,GO:0003006,GO:0003674,GO:0003824,GO:0004148,GO:0004375,GO:0004591,GO:0004738,GO:0004739,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005773,GO:0005929,GO:0005947,GO:0005960,GO:0005967,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006091,GO:0006099,GO:0006101,GO:0006103,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006508,GO:0006520,GO:0006544,GO:0006546,GO:0006549,GO:0006550,GO:0006551,GO:0006552,GO:0006563,GO:0006564,GO:0006573,GO:0006574,GO:0006629,GO:0006631,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006748,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007369,GO:0007568,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009060,GO:0009063,GO:0009069,GO:0009070,GO:0009071,GO:0009081,GO:0009083,GO:0009106,GO:0009108,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009152,GO:0009161,GO:0009165,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009260,GO:0009295,GO:0009353,GO:0009653,GO:0009790,GO:0009987,GO:0012505,GO:0015980,GO:0016053,GO:0016054,GO:0016310,GO:0016491,GO:0016624,GO:0016638,GO:0016642,GO:0016651,GO:0016667,GO:0016668,GO:0016903,GO:0016999,GO:0017144,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019464,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022900,GO:0022904,GO:0030062,GO:0030141,GO:0030154,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032991,GO:0033218,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0036211,GO:0042133,GO:0042135,GO:0042391,GO:0042645,GO:0042737,GO:0042743,GO:0042773,GO:0042775,GO:0042995,GO:0043159,GO:0043167,GO:0043168,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043544,GO:0043603,GO:0043604,GO:0043648,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0045333,GO:0046034,GO:0046390,GO:0046394,GO:0046395,GO:0046483,GO:0046496,GO:0048037,GO:0048232,GO:0048240,GO:0048468,GO:0048469,GO:0048515,GO:0048598,GO:0048609,GO:0048856,GO:0048869,GO:0050660,GO:0050662,GO:0051068,GO:0051186,GO:0051188,GO:0051287,GO:0051704,GO:0055086,GO:0055114,GO:0061732,GO:0065007,GO:0065008,GO:0070013,GO:0071616,GO:0071704,GO:0072350,GO:0072521,GO:0072522,GO:0072524,GO:0072593,GO:0090407,GO:0097159,GO:0097223,GO:0097708,GO:0098798,GO:0099503,GO:0106077,GO:0120025,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901681,GO:1902494,GO:1990204,GO:1990234
EggNOG free text desc.FAD dependent oxidoreductase
EggNOG OGs2XA5H@2836,COG1249@1,KOG1335@2759
Ec32 ortholog descriptiondihydrolipoamide dehydrogenase
Ec32 orthologEc-27_004160.1
EC1.8.1.4
COG Functional cat.C
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000,ko01009,ko04147
Exons7
Model size2091
Cds size1509
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931036.2781508-UTR-H-paniculata_contig8255:4080..46031622931036.2781508-UTR-H-paniculata_contig8255:4080..4603Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8255 4081..4603 -
1691481560.5979283-UTR-H-paniculata_contig8255:4080..46031691481560.5979283-UTR-H-paniculata_contig8255:4080..4603Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8255 4081..4603 -
1622931036.4102778-UTR-H-paniculata_contig8255:10393..104521622931036.4102778-UTR-H-paniculata_contig8255:10393..10452Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8255 10394..10452 -
1691481560.6935291-UTR-H-paniculata_contig8255:10393..104521691481560.6935291-UTR-H-paniculata_contig8255:10393..10452Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8255 10394..10452 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931036.2907066-CDS-H-paniculata_contig8255:4603..49271622931036.2907066-CDS-H-paniculata_contig8255:4603..4927Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 4604..4927 -
1691481560.6211643-CDS-H-paniculata_contig8255:4603..49271691481560.6211643-CDS-H-paniculata_contig8255:4603..4927Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 4604..4927 -
1622931036.3068693-CDS-H-paniculata_contig8255:5152..55211622931036.3068693-CDS-H-paniculata_contig8255:5152..5521Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 5153..5521 -
1691481560.631976-CDS-H-paniculata_contig8255:5152..55211691481560.631976-CDS-H-paniculata_contig8255:5152..5521Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 5153..5521 -
1622931036.3253028-CDS-H-paniculata_contig8255:5768..59631622931036.3253028-CDS-H-paniculata_contig8255:5768..5963Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 5769..5963 -
1691481560.6421058-CDS-H-paniculata_contig8255:5768..59631691481560.6421058-CDS-H-paniculata_contig8255:5768..5963Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 5769..5963 -
1622931036.3418357-CDS-H-paniculata_contig8255:6227..64281622931036.3418357-CDS-H-paniculata_contig8255:6227..6428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 6228..6428 -
1691481560.6533878-CDS-H-paniculata_contig8255:6227..64281691481560.6533878-CDS-H-paniculata_contig8255:6227..6428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 6228..6428 -
1622931036.3626416-CDS-H-paniculata_contig8255:6826..69941622931036.3626416-CDS-H-paniculata_contig8255:6826..6994Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 6827..6994 -
1691481560.6634443-CDS-H-paniculata_contig8255:6826..69941691481560.6634443-CDS-H-paniculata_contig8255:6826..6994Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 6827..6994 -
1622931036.3811638-CDS-H-paniculata_contig8255:9791..99601622931036.3811638-CDS-H-paniculata_contig8255:9791..9960Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 9792..9960 -
1691481560.6734974-CDS-H-paniculata_contig8255:9791..99601691481560.6734974-CDS-H-paniculata_contig8255:9791..9960Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 9792..9960 -
1622931036.3964026-CDS-H-paniculata_contig8255:10310..103931622931036.3964026-CDS-H-paniculata_contig8255:10310..10393Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 10311..10393 -
1691481560.6832423-CDS-H-paniculata_contig8255:10310..103931691481560.6832423-CDS-H-paniculata_contig8255:10310..10393Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8255 10311..10393 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8255.16275.1prot_H-paniculata_contig8255.16275.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8255 4604..10393 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8255.16275.1

>prot_H-paniculata_contig8255.16275.1 ID=prot_H-paniculata_contig8255.16275.1|Name=mRNA_H-paniculata_contig8255.16275.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=503bp
MTHVALRMRSSPSLVHRFRPISFMGCTRALSASSEPYDVVVVGGGPGGYV
AAIKSSQLRLKTAVVESRGKLGGTCLNVGCIPSKALLHSSHLFHEAAHNM
AAHGISTGDVSINVAKMMENKASKVEGLTGGIEYLCKKYEVDYVKGFGKL
GGPNTVNVDLTEGGKQSLETKNILIATGSEVTPLPPVPVDNAQGKIVDST
GALDLKEVPEKLVLIGGGVIGLEMGSVWSRLGSKVTVVEFLDRVCPSMDQ
EITKAFTRVLKKQGLKFKFKTKVVSSEVTSSGVKLTMEPAAGGDQTTMDA
DVVLVATGRRPFTANLGCDELGISLDKMGRIEVDSRFRTAVPSIYAIGDC
IAGPMLAHKAEEEGIACVETIAGFAGHVNYDAIPGVVYTHPELAEVGKTE
EALKEAGVAYNKGVFPFSANSRASCVGDKDGMVKILSDKETDRILGAHIL
GPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSEALKEACMATYDKPI
HF*
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mRNA from alignment at H-paniculata_contig8255:4081..10452-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8255.16275.1 ID=mRNA_H-paniculata_contig8255.16275.1|Name=mRNA_H-paniculata_contig8255.16275.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6372bp|location=Sequence derived from alignment at H-paniculata_contig8255:4081..10452- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGCTTATTGACCTTTTGTACGCCAAGCCGAGAGAGTTAACCTCTGAAAG TTCGACGTCATGACCCATGTGGCTTTGCGAATGCGTTCATCTCCAAGTTT GGTCCACCGCTTTCGACCCATCTCGTTCATGGGATGCACAAGGCAAGACT CACTCCCAGTAGGGCGTATGCTACTAAATGACCCGCTCCTTGTTACTATG TAGACAATGACGTACTGTACTGTAGTGTCTATTCCCTGACTGTATATGTA CGATGCAGATGGCGAAATCTTCATGGTGAACACCGCCTGTGCGTGTAGGC TAGCGTGTTGATGGTGTCTCTTGAAATCAGCGTTCGTTTTCGTTTCTAGC AATGTACCACGTGAACATGACCGAGCGTCACGCGTTTTCATCTCGCCTAC TAGTGTTTTTTATGTTGATGGAGGATAAAGGAGGATAAAAGTGAAAGTGC GAGTTAGTTCATTTTCAGTATCCTCCGCCTTTTGCACAACAGAGCACTGT CAGCGTCGTCTGAGCCTTACGACGTCGTTGTTGTTGGAGGGGGGCCCGGA GGCTACGTGGCCGCCATCAAGTCCAGCCAACTTAGGCTTAAGACTGCTGT CGTTGAGTCCCGGGGCAAACTAGGTGGAACCTGTCTGAATGTGGGCTGCA TTCCATCCAAGGTGAGACAGATCCCAGTCAGGGTAATAAAGGTAAAGGTT AACTGTTCTGCTTCGTTTGTGAATGTTCAGTTAAAATATTCGAAGTCTAG TTTTTCGCTCGGTTACATATAGAAGCAGACAGCCTTGAAAGTTTCCAACA GCAGCATGTGAGCCTACAGAGATTTTCGATCACTTAAATCACTCAAGTCT GACATGTTTTGGTGACTGCCCATCTTCGCAGCCAGGTCTCTTTTCAGGCC TTAGTTCGTCACTACTTTAATCAATCCAATGAAAAAGGCGTGCTGATCAA TTGCTTTGATTGGTTTCAAAAGGATGTGAATCTGTGTGAATGATGGAACA TGGCAATTGCCATCTCTGGCTACCAAGGGACGGGACAAGTTTATTCACCC ATGACAAACATCAAGTTCAGTCCAGTGAGCTTCTCCAGTTTGGTGGTCGG CGTTGTATACTCCACTGTCAATTATAGTCACTACCGCGAAGGCCCAAAAT GCGCTACAACCTGTGCAGGACTGACTGTTTGCAGACTGGTACTGCAAAAC TAGCGTTGGTACAATGTACTAAATAGTCATCGCACAACGAACAGACAAAC GGTTCTTGCCTGGGGTGCTGTAGTTGTTACGTAGACTCTTTGAACTGATC CTCAATACGGTTCAAATAAACAATACTGCTGACATTCAAAATTTCCCCTC TGCACGAAGCAGTTTATTTTCTCAGATGGGCAAGTAAGTTGATGCGACCC ATATTTTAGTTTGTTTCACCATTATTTATCACTTGGAAGTACGACGCTAT CGATTTCTCCTGGGATGCCACTGTCTTGCTGAGGCTGGCGGCGTTTGTGG TTGCTTTTACTTCCGTCAAATGGCCACACATCGCACACAAAAATATGATG TTGATTACTTCTTTGCGCCAACTCTCAAATCAGAATCAGTGTCGTCGGCG TTTCAAGGTTGAACGTTGGGGATTAAGTGGGCCTAACGACCACCCCAGAA TGTTCCCGAGCGCTTAGTTGAACTTTCTAAACTTTTTTCTGGCTACTTCT TCACGATTTCCTTGGTGGGTTGAAATATCATATCTGAGATTGCAAGACTG CCACATGGTGAGGCTGCAGCAGTCAACAACAAAAACAGAGGTAATGACCA GTACACACCAGACGGATAGTAGATGTAGCAAGAAGGAGAGGCCAGTGGGT AATTACAACTAACGGGAACGTCACCGCATGGTCCTGCAGCGGCCGCGTGC TGCCTCGTCACACCAGTATCGAAATGGAAATTTACAGGTCTCTCTTTTGG CTAGAAGTACGCTGTAAATTAATATCCTGTATGCAGATAGTAAGCAACCG AGAGTGCGGAATGTCTTGTGCTCTTGTTTTGTCTCTGTATTAGTGGTTGC TACTATTTGCTGTGGGTTGGGGAAAACAGAGGTATACGTTCCTGCTCGCA AATACCCAAACACTATTTAACAGGCGATACTCGAGATTGGCGATCAACTT TCTTGTTGGGATTGAAGTACCGTTGAAATTGAATGGAATACTTCAAAATT GGTGCTAGCGAAAGACACTTTCCGAGGAAAGTTCGTCTCCATCTCACTGC CATTTACTCTGTACGATGAATTTGGAAACCTTTTCATACCCTGATTCGCA CGAAAAGTGCCTTTCGTTTGCAGCATTTTCGAAGTATTCCATTCAAATTC AATGGAACCTCAATCCCAACAAGAAAGTTGGTCCCCAATCCCGAGTATCG CTTGTTGCGTCCATTTAATGCCAACAACTCCAGTACAAATGCTGAAACAG GTAGTTGGGTTGGGATCTTCGTAGATACTACCTAGTGTCGTTTGCTTAAT TTATGTTTCAGTACCAGTGAGGGCCACATCTATTGGTTGTTCGGAAGTAT AGGCCTATGGTTTTGCGGATCGCTCGCTACGCCCAAGTTAACATGAAAAT TCACGTCGAAAACGACATCTTCGTGCTAAAATACATTTTTTTGGCAATTG ACACACGTAGTCCAAAGACATGGGGGCTGCTGCTGGGCATGGGGTGATTT TCGCCATGGTGACGACCACTCTCTTATATCTTCGTTGTCGCTGAAGCAAG TGGTGAAACGTACTCAACAGAGTGGATCTCCTATTGGATACGTGCTTATG CCTAGATATTTCGTGACGGGTACGGCACACTACTGTTGTACTGAAGCAGT GGTTACGATCTCACGATCTCATACTGCAATACTGATTGTGACATTTCGTC CTTGACGTTTCTTGGGTGGTGTGCACTCCGCTAGAAGACCAGCAGAGATT CAATTGGCTGTGTAATATCCCGAATGTGTTTGATCGACAGAGGTGTTTCC ATTTCCTTAGTCTTTTTGGCCAGGATTTGGTCCATTCAAATTTTGTGACC GTATCCGTGCTTAAAGGCTCTACAATTTGATTATACTGTATTAACCCCCC TCAGCTCTCCCTCCTCCCGAAGGCGCGTGTTCAGTAGTATCACAACTACG GCGTTCAAAACATGAGTACGCTCCCATACGTAACGTACCAACCCTCATAA TACGTTTGAGATATCCACGAAATTCAGGGAACGCAATAGAAGATCGCTCC ACCTAGCAACACCTTCCGCCGTGACAGGTTGTTGCTGTCAAAGAACTTGC GCTATGTCGTTGATTAGAATGTTAGGGGCAAGAGATGGTGAACATGTGGG TCGCCTCATGTACGTTGTTGGTAAGTCCAACACACACCTATATTACTTCC TTCAAGGTCATAACATTACTGAGCTGTGCTAACACTCCGTTTTTGTTCGT GGTCGCAGGCTTTATTGCATTCGTCGCATTTGTTTCACGAGGCAGCCCAT AACATGGCGGCGCACGGCATCAGCACGGGTGATGTGTCAATAAATGTGGC CAAGATGATGGAAAACAAGGCCTCGAAAGTGGAGGGTCTAACGGGCGGCA TCGAATACCTGTGCAAAAAGTATGAGGTTCGTTATGGGCCGTTTTCGATG GTCGTTTACCAGGAAAGGACTTGCAATCTGATCATTTTATTTCCCCTGTT ATGATGACACGGTGCGTACTGTCATCGTTATGCTGTAGATCGCTATTTCT TCTCAAACTCGCGCCCGAGTCACACTTCGTCAGAGGAAGAAGTGAAGTGT AGTGGTGCAGTACTAGGCACTCGAGCGCCGATTTTTCGCCCACGTTAATA TGACGTGAAAATATCGCAAAAATTCACGTCTCGACTGGAGCAGCGTTGCA AGCTCACTATCCGATATTGATGTTGGCCGGTTGCGCTCTTGATGCGTCAA TGTCGTACATTTGGCTACTTGTTGATATATATGCTGCCTAAGTGAAATTG GCCCCTCCTGGTGCACTTGCTCAGGTTGACTATGTAAAGGGATTCGGCAA GCTTGGCGGACCCAACACGGTCAACGTGGATCTTACTGAGGGTGGCAAGC AGTCCCTGGAGACTAAGAACATCCTAATTGCCACTGGATCTGAGGTAACT CCTCTCCCGCCCGTACCTGTCGACAATGCCCAAGGAAAAATTGTGGACTC AACGGGGGCGCTCGACCTGAAGGAGGTGAACTTTGGAAGGTTTGAAGACG TTCAGAGTCAGCCTTATCACCCACGGTATGGAAGAGATCTTTTTGGTATC CACAGCATAAGGATACAGCTCGTCGCGTCGGTGTTTTACAGCAGTGCTAA GAAAGAACTGCCAGCAACGGGCGATTTCGGCAGTCTTTAGCTTCCACTTG GTGCAAGCATCCTCTGACTGTCACGACCTACGGTATATTTTTTTGTTTCG GACAACTTGAGTCATGTGGCCTACTTGTTTCTATGTCAGGTTCCCGAGAA GTTGGTTCTGATCGGGGGCGGGGTAATCGGATTGGAGATGGGCTCCGTGT GGAGCCGACTTGGCTCCAAGGTAACTGTGGTGGAATTTTTGGACAGAGTT TGTCCTTCAATGGACCAAGAAATAACAAAGGCGTTCACACGAGTCCTCAA GAAGCAGGGGCTCAAGTTCAAATTCAAGACAAAGGTGAGGCGTTGAGGTG CTTGACCCTTTGTTCACATTTATGTGCCACGCTCATTCACCTGTTGGCGA ATTTTTTGTAGACACAATTGAATTGCCAATAATTTGCGGAACTGCGATGC TTGCGATAGCTTGTCGGTGGCGGCTCCCATAGCTTTCTCGGAGAGAATTG AAGATCGCCAACGAGCGTTGGTTGACCACGTGGTGATGACGCGTGGTCGA TGATGGATGATTAAACCAACTATACGCCCAGGTGGTGTCCTCTGAGGTCA CTTCTTCAGGAGTAAAGCTAACTATGGAGCCAGCAGCCGGAGGAGACCAG ACAACGATGGATGCTGATGTTGTATTGGTGGCTACAGGCCGGCGGCCGTT TACAGCCAACCTAGGGTGTGATGAACTTGGCATATCTCTGGACAAGATGG GCCGAATCGAAGTGGACTCACGCTTCCGCACGGCGGTACCATCTATCTAC GCTATCGGCGATTGCATCGCGGGCCCCATGCTGGCCCACAAAGCAGAGGA GGAAGGCATTGCCTGTGTAGAAACTATTGCAGGGTTTGCCGGGCACGTGA ATTACGACGCAATTCCGGGAGTGGTGTACACTCACCCGGAGCTGGCAGAG GTGAGAGCTAGGTACATGTAGTAGTGTGGGTGACAGGACATAAGGTGGTG TTTCGGTGATGCCCAGAATTAACCAAGCAAAGTTGTTTTTATCTTGGGGG TAACTGAAGGCCAGGTATTTGTCCATGGTGGCGCCCCATATAATTCCTCG GCCGTAAATGAAAACTGTACTAACTTTCATGTGAACGAATATGCGGTTTA GACTGAAATTCTTTGTGTGCTCCAGGTTGGCAAAACTGAGGAAGCTTTGA AAGAAGCTGGCGTTGCATACAACAAGGGTGTCTTCCCTTTCTCAGCCAAC AGCCGTGCCTCATGCGTGGGTGACAAGGATGGGATGGTCAAGATTCTTAG CGACAAGGAGACCGACCGTATCCTCGGCGCTCATATCCTTGGACCGAACG CGGGGGAAATGATCGCAGAGGTGGTCCTTGCAATGGAGTACGGGGCCTCC AGTGAAGATATTGCCAGGACATGCCACGCCCACCCCACTCTCAGTGAAGC GCTGAAGGAGGCATGCATGGCAACGTATGACAAGCCAATTCACTTTTAAA TTTTGCGTAATAGAAGTGACGTAAGCTAGACAGCAGTCCTCGGTCGTACC GTATGAGCAATGTCCCGCAGAAGTTAGTATCACATCGCTTCACTAGTTTT TGAGAAAACGCCACAATACTCGACACGCTGTGCTGCCAGTCGAACACTGG GTGGGGGCTTGTGGATTTGTTGTCTCGATGTTCACGGCAGGTTCACTGGT TTTATTTGTTCTTGTACCCACTGGAGTGTTGATGCTGGGTTTTCGGATTT CCTTCTATTATGTGACCAGGCCATCACGCTACAACACATGAGGGGGCACA TTATAAGACGAGCGATGAGTCAATGAATCCCTTCCGCATGCATCGAGTAA AGTGCGCTGTTCTAGGAAATCATTTCCAATCATTTTTTGCCCTTTTTCTT CTTCGAAAGACGAGTGGCCTCTGCCTTTTTTCCAGACTCGTACTGTTCTT GATGGAGGCGTGCCACCTCCGCCTCCTCCATCACTTCCCTGAAAAACCTG TCACCAAGCACGTCATAGAAAT
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Coding sequence (CDS) from alignment at H-paniculata_contig8255:4081..10452-

>mRNA_H-paniculata_contig8255.16275.1 ID=mRNA_H-paniculata_contig8255.16275.1|Name=mRNA_H-paniculata_contig8255.16275.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3018bp|location=Sequence derived from alignment at H-paniculata_contig8255:4081..10452- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACCCATGTGGCTTTGCGAATGCGTTCATCTCCAAGTTTGGTCCACCG
CTTTCGACCCATCTCGTTCATGGGATGCACAAGATGACCCATGTGGCTTT
GCGAATGCGTTCATCTCCAAGTTTGGTCCACCGCTTTCGACCCATCTCGT
TCATGGGATGCACAAGAGCACTGTCAGCGTCGTCTGAGCCTTACGACGTC
GTTGTTGTTGGAGGGGGGCCCGGAGGCTACGTGGCCGCCATCAAGTCCAG
CCAACTTAGGCTTAAGACTGCTGTCGTTGAGTCCCGGGGCAAACTAGGTG
GAACCTGTCTGAATGTGGGCTGCATTCCATCCAAGAGCACTGTCAGCGTC
GTCTGAGCCTTACGACGTCGTTGTTGTTGGAGGGGGGCCCGGAGGCTACG
TGGCCGCCATCAAGTCCAGCCAACTTAGGCTTAAGACTGCTGTCGTTGAG
TCCCGGGGCAAACTAGGTGGAACCTGTCTGAATGTGGGCTGCATTCCATC
CAAGGCTTTATTGCATTCGTCGCATTTGTTTCACGAGGCAGCCCATAACA
TGGCGGCGCACGGCATCAGCACGGGTGATGTGTCAATAAATGTGGCCAAG
ATGATGGAAAACAAGGCCTCGAAAGTGGAGGGTCTAACGGGCGGCATCGA
ATACCTGTGCAAAAAGTATGAGGCTTTATTGCATTCGTCGCATTTGTTTC
ACGAGGCAGCCCATAACATGGCGGCGCACGGCATCAGCACGGGTGATGTG
TCAATAAATGTGGCCAAGATGATGGAAAACAAGGCCTCGAAAGTGGAGGG
TCTAACGGGCGGCATCGAATACCTGTGCAAAAAGTATGAGGTTGACTATG
TAAAGGGATTCGGCAAGCTTGGCGGACCCAACACGGTCAACGTGGATCTT
ACTGAGGGTGGCAAGCAGTCCCTGGAGACTAAGAACATCCTAATTGCCAC
TGGATCTGAGGTAACTCCTCTCCCGCCCGTACCTGTCGACAATGCCCAAG
GAAAAATTGTGGACTCAACGGGGGCGCTCGACCTGAAGGAGGTTGACTAT
GTAAAGGGATTCGGCAAGCTTGGCGGACCCAACACGGTCAACGTGGATCT
TACTGAGGGTGGCAAGCAGTCCCTGGAGACTAAGAACATCCTAATTGCCA
CTGGATCTGAGGTAACTCCTCTCCCGCCCGTACCTGTCGACAATGCCCAA
GGAAAAATTGTGGACTCAACGGGGGCGCTCGACCTGAAGGAGGTTCCCGA
GAAGTTGGTTCTGATCGGGGGCGGGGTAATCGGATTGGAGATGGGCTCCG
TGTGGAGCCGACTTGGCTCCAAGGTAACTGTGGTGGAATTTTTGGACAGA
GTTTGTCCTTCAATGGACCAAGAAATAACAAAGGCGTTCACACGAGTCCT
CAAGAAGCAGGGGCTCAAGTTCAAATTCAAGACAAAGGTTCCCGAGAAGT
TGGTTCTGATCGGGGGCGGGGTAATCGGATTGGAGATGGGCTCCGTGTGG
AGCCGACTTGGCTCCAAGGTAACTGTGGTGGAATTTTTGGACAGAGTTTG
TCCTTCAATGGACCAAGAAATAACAAAGGCGTTCACACGAGTCCTCAAGA
AGCAGGGGCTCAAGTTCAAATTCAAGACAAAGGTGGTGTCCTCTGAGGTC
ACTTCTTCAGGAGTAAAGCTAACTATGGAGCCAGCAGCCGGAGGAGACCA
GACAACGATGGATGCTGATGTTGTATTGGTGGCTACAGGCCGGCGGCCGT
TTACAGCCAACCTAGGGTGTGATGAACTTGGCATATCTCTGGACAAGATG
GGCCGAATCGAAGTGGACTCACGCTTCCGCACGGCGGTACCATCTATCTA
CGCTATCGGCGATTGCATCGCGGGCCCCATGCTGGCCCACAAAGCAGAGG
AGGAAGGCATTGCCTGTGTAGAAACTATTGCAGGGTTTGCCGGGCACGTG
AATTACGACGCAATTCCGGGAGTGGTGTACACTCACCCGGAGCTGGCAGA
GGTGGTGTCCTCTGAGGTCACTTCTTCAGGAGTAAAGCTAACTATGGAGC
CAGCAGCCGGAGGAGACCAGACAACGATGGATGCTGATGTTGTATTGGTG
GCTACAGGCCGGCGGCCGTTTACAGCCAACCTAGGGTGTGATGAACTTGG
CATATCTCTGGACAAGATGGGCCGAATCGAAGTGGACTCACGCTTCCGCA
CGGCGGTACCATCTATCTACGCTATCGGCGATTGCATCGCGGGCCCCATG
CTGGCCCACAAAGCAGAGGAGGAAGGCATTGCCTGTGTAGAAACTATTGC
AGGGTTTGCCGGGCACGTGAATTACGACGCAATTCCGGGAGTGGTGTACA
CTCACCCGGAGCTGGCAGAGGTTGGCAAAACTGAGGAAGCTTTGAAAGAA
GCTGGCGTTGCATACAACAAGGGTGTCTTCCCTTTCTCAGCCAACAGCCG
TGCCTCATGCGTGGGTGACAAGGATGGGATGGTCAAGATTCTTAGCGACA
AGGAGACCGACCGTATCCTCGGCGCTCATATCCTTGGACCGAACGCGGGG
GAAATGATCGCAGAGGTGGTCCTTGCAATGGAGTACGGGGCCTCCAGTGA
AGATATTGCCAGGACATGCCACGCCCACCCCACTCTCAGTGAAGCGCTGA
AGGAGGCATGCATGGCAACGTATGACAAGCCAATTCACTTTTAAGTTGGC
AAAACTGAGGAAGCTTTGAAAGAAGCTGGCGTTGCATACAACAAGGGTGT
CTTCCCTTTCTCAGCCAACAGCCGTGCCTCATGCGTGGGTGACAAGGATG
GGATGGTCAAGATTCTTAGCGACAAGGAGACCGACCGTATCCTCGGCGCT
CATATCCTTGGACCGAACGCGGGGGAAATGATCGCAGAGGTGGTCCTTGC
AATGGAGTACGGGGCCTCCAGTGAAGATATTGCCAGGACATGCCACGCCC
ACCCCACTCTCAGTGAAGCGCTGAAGGAGGCATGCATGGCAACGTATGAC
AAGCCAATTCACTTTTAA
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