mRNA_H-paniculata_contig8254.16273.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8254.16273.1 vs. uniprot
Match: D7FWX3_ECTSI (Axonemal 1-beta dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX3_ECTSI) HSP 1 Score: 286 bits (731), Expect = 2.200e-86 Identity = 141/160 (88.12%), Postives = 151/160 (94.38%), Query Frame = 1
Query: 1 AEQTPKPFSIKDIKNTLASRSDPDPMKTVLLQEAERYNSLLLGVARQLADLKKAVKGLVVVTPELEDISQALLQGKVPQSWSKCYPSLKPLGSWMRDLIVRADQIREWALTAMPKVFWLPGMTYPSGFLTALLQTSARKNGIAIDTLSWEFSVMGQDTSA 480
+EQ PK F+IK+IK+ LASRSDPDPMKTVLLQE+ERYNSLL GVARQLADLKKAVKGLVVVTPELEDISQALLQGKVP SWSKCYPSLKPLG+WMRDLI RA+ IR+WA+ AMPKVFWLP MTYPSGFLTALLQTSARKNGIAIDTLSWEFSV+GQDTSA
Sbjct: 4474 SEQVPKAFNIKEIKSILASRSDPDPMKTVLLQESERYNSLLHGVARQLADLKKAVKGLVVVTPELEDISQALLQGKVPTSWSKCYPSLKPLGAWMRDLIQRAEHIRDWAMVAMPKVFWLPCMTYPSGFLTALLQTSARKNGIAIDTLSWEFSVLGQDTSA 4633
BLAST of mRNA_H-paniculata_contig8254.16273.1 vs. uniprot
Match: A0A7S1CJP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJP2_9STRA) HSP 1 Score: 216 bits (549), Expect = 3.210e-63 Identity = 99/156 (63.46%), Postives = 123/156 (78.85%), Query Frame = 1
Query: 13 PKPFSIKDIKNTLASRSDPDPMKTVLLQEAERYNSLLLGVARQLADLKKAVKGLVVVTPELEDISQALLQGKVPQSWSKCYPSLKPLGSWMRDLIVRADQIREWALTAMPKVFWLPGMTYPSGFLTALLQTSARKNGIAIDTLSWEFSVMGQDTSA 480
P+ F ++++ + R+DPDP+KTVL QE ERYN LL +AR L DL++ +KGLVV+TPELE++ ALL GKVP+ W+ CYPSLKPLG+WMRDL+ R Q+R W AMPKVFWL G TYP+GFLTALLQTSARKNG+AIDTLSW+F V+ QD A
Sbjct: 488 PEAFDFEEVQKVMEGRADPDPLKTVLFQEIERYNRLLRLLARSLRDLQRGIKGLVVITPELEEVFDALLVGKVPEGWAFCYPSLKPLGTWMRDLVERVLQMRSWVEEAMPKVFWLSGFTYPTGFLTALLQTSARKNGVAIDTLSWDFPVLQQDEGA 643
BLAST of mRNA_H-paniculata_contig8254.16273.1 vs. uniprot
Match: A0A813A0F5_9DINO (DHC10 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A0F5_9DINO) HSP 1 Score: 208 bits (529), Expect = 1.580e-60 Identity = 95/150 (63.33%), Postives = 119/150 (79.33%), Query Frame = 1
Query: 13 PKPFSIKDIKNTLASRSDPDPMKTVLLQEAERYNSLLLGVARQLADLKKAVKGLVVVTPELEDISQALLQGKVPQSWSKCYPSLKPLGSWMRDLIVRADQIREWALTAMPKVFWLPGMTYPSGFLTALLQTSARKNGIAIDTLSWEFSVM 462
P+PF ++ + N +A RSDP+P+KTVL QE +RYN LL + L DL++ ++GLVV+TPELE I +LL G VP++WS CYPSLKPLGSWMRDL +R Q+++W +PKVFWL G TYP+GFLTALLQTSARKNGIAID+LSWEF VM
Sbjct: 449 PQPFDLEQVHNIMAGRSDPEPLKTVLFQEVDRYNKLLKKMRSTLIDLQRGIQGLVVITPELEGIFASLLNGSVPKAWSFCYPSLKPLGSWMRDLQLRVQQMQQWVEVELPKVFWLSGFTYPTGFLTALLQTSARKNGIAIDSLSWEFPVM 598
BLAST of mRNA_H-paniculata_contig8254.16273.1 vs. uniprot
Match: A0A7S1XUA6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUA6_9STRA) HSP 1 Score: 209 bits (533), Expect = 6.860e-60 Identity = 97/159 (61.01%), Postives = 121/159 (76.10%), Query Frame = 1
Query: 4 EQTPKPFSIKDIKNTLASRSDPDPMKTVLLQEAERYNSLLLGVARQLADLKKAVKGLVVVTPELEDISQALLQGKVPQSWSKCYPSLKPLGSWMRDLIVRADQIREWALTAMPKVFWLPGMTYPSGFLTALLQTSARKNGIAIDTLSWEFSVMGQDTSA 480
EQ P+ F+ + ++ LA+R+DPDP+KTVL+QE +RYN LL + L DL+ A +GLVV+TP LED+ A L+ KVP W KCYPSLKPLG+W+RDL VR Q+ WA +P VFWLPG TYP+GFLTALLQTSARKNGIAIDTLSWEF ++ Q+ A
Sbjct: 781 EQVPETFNERKVRQDLAARTDPDPLKTVLMQEIDRYNKLLFTMLSSLKDLQLAARGLVVMTPALEDVMNAFLEFKVPAMWGKCYPSLKPLGTWIRDLGVRTGQLHTWAGKGVPSVFWLPGFTYPTGFLTALLQTSARKNGIAIDTLSWEFPIVNQEAGA 939
BLAST of mRNA_H-paniculata_contig8254.16273.1 vs. uniprot
Match: A0A067BUJ1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BUJ1_SAPPC) HSP 1 Score: 201 bits (511), Expect = 8.810e-57 Identity = 94/155 (60.65%), Postives = 120/155 (77.42%), Query Frame = 1
Query: 4 EQTPKPFSIKDIKNTLASRSDPDPMKTVLLQEAERYNSLLLGVARQLADLKKAVKGLVVVTPELEDISQALLQGKVPQSWSKCYPSLKPLGSWMRDLIVRADQIREWALTAMPKVFWLPGMTYPSGFLTALLQTSARKNGIAIDTLSWEFSVMGQ 468
E+ P PF + +K L++RSDPD +KTVL+QE ERYN LL + L L+K ++GLVV+TPELE +SQALL G VP++WS CYPSLKPLG+W +L R Q+R WA TAMP VFWL G TYP+GFLTALLQT+ARKNG++ID+L+WEF ++ Q
Sbjct: 4214 EKVPDPFDLATVKLNLSARSDPDALKTVLVQELERYNKLLSTIKSSLIALEKGLQGLVVITPELEGVSQALLLGAVPKAWSFCYPSLKPLGAWTTELEQRVAQMRHWANTAMPVVFWLAGFTYPTGFLTALLQTAARKNGVSIDSLNWEFLIVNQ 4368
BLAST of mRNA_H-paniculata_contig8254.16273.1 vs. uniprot
Match: T0Q894_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q894_SAPDV) HSP 1 Score: 201 bits (511), Expect = 8.810e-57 Identity = 94/155 (60.65%), Postives = 120/155 (77.42%), Query Frame = 1
Query: 4 EQTPKPFSIKDIKNTLASRSDPDPMKTVLLQEAERYNSLLLGVARQLADLKKAVKGLVVVTPELEDISQALLQGKVPQSWSKCYPSLKPLGSWMRDLIVRADQIREWALTAMPKVFWLPGMTYPSGFLTALLQTSARKNGIAIDTLSWEFSVMGQ 468
E+ P PF + +K L++RSDPD +KTVL+QE ERYN LL + L L+K ++GLVV+TPELE +SQALL G VP++WS CYPSLKPLG+W +L R Q+R WA TAMP VFWL G TYP+GFLTALLQT+ARKNG++ID+L+WEF ++ Q
Sbjct: 4241 EKVPDPFDLPTVKLNLSARSDPDALKTVLVQELERYNKLLSTIKSSLIALEKGLQGLVVITPELEGVSQALLLGAVPKAWSFCYPSLKPLGAWTAELEQRVAQMRHWAHTAMPVVFWLAGFTYPTGFLTALLQTAARKNGVSIDSLNWEFLIVNQ 4395
BLAST of mRNA_H-paniculata_contig8254.16273.1 vs. uniprot
Match: F0YMC7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMC7_AURAN) HSP 1 Score: 199 bits (506), Expect = 4.060e-56 Identity = 103/179 (57.54%), Postives = 127/179 (70.95%), Query Frame = 1
Query: 4 EQTPKPFSIKDIKNTLASRSDPDPMKTV---------LLQEAERYNSLLLGVARQLADLKKAVKGLVVVTPELEDISQALLQGK----------VPQSWSKCYPSLKPLGSWMRDLIVRADQIREWALTAMPKVFWLPGMTYPSGFLTALLQTSARKNGIAIDTLSWEFSVMGQDTSAP 483
EQ P F +K ++ T+ R+DP+PMKTV L QE +RYN+LLL + L DL+ V+GLVVVTPELED+ +ALL+ K VP +WSKCYPSLKPL SW+RDL+ R D ++ W A+P+ FWLPG TYP+GFLTALLQTSARKNGIAIDTLSWEF V+ +TSAP
Sbjct: 1997 EQVPPIFELKAVRKTMDPRADPEPMKTVIGRSRLQHVLYQEVDRYNNLLLMLHHSLKDLELGVQGLVVVTPELEDVMEALLEFKAGFLVASAFIVPGAWSKCYPSLKPLSSWIRDLVSRVDALQRWIDEALPRCFWLPGFTYPTGFLTALLQTSARKNGIAIDTLSWEFPVV--NTSAP 2173
BLAST of mRNA_H-paniculata_contig8254.16273.1 vs. uniprot
Match: A0A482RMM2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RMM2_9ARCH) HSP 1 Score: 189 bits (481), Expect = 1.200e-55 Identity = 88/150 (58.67%), Postives = 114/150 (76.00%), Query Frame = 1
Query: 13 PKPFSIKDIKNTLASRSDPDPMKTVLLQEAERYNSLLLGVARQLADLKKAVKGLVVVTPELEDISQALLQGKVPQSWSKCYPSLKPLGSWMRDLIVRADQIREWALTAMPKVFWLPGMTYPSGFLTALLQTSARKNGIAIDTLSWEFSVM 462
P+ F ++ ++ ++A+RSDP+P+K V+ QE ERYN+LL + R L L+K ++G VV+TPELE I ALL G+VP +W+ CYPSLKPLG W RDL R Q+R+W MPKVFWL G TYP+GFLTALLQTSARKNG+ IDTL +E+ VM
Sbjct: 175 PESFDMEAVRTSMATRSDPEPLKVVVFQEVERYNALLDVMRRTLVALQKGIQGTVVITPELEQIFSALLLGRVPAAWAFCYPSLKPLGLWFRDLQARIQQLRKWVTHEMPKVFWLSGFTYPTGFLTALLQTSARKNGLPIDTLEFEYVVM 324
BLAST of mRNA_H-paniculata_contig8254.16273.1 vs. uniprot
Match: A0A1V9YWN4_9STRA (Dynein heavy chain n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YWN4_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.240e-55 Identity = 90/155 (58.06%), Postives = 118/155 (76.13%), Query Frame = 1
Query: 4 EQTPKPFSIKDIKNTLASRSDPDPMKTVLLQEAERYNSLLLGVARQLADLKKAVKGLVVVTPELEDISQALLQGKVPQSWSKCYPSLKPLGSWMRDLIVRADQIREWALTAMPKVFWLPGMTYPSGFLTALLQTSARKNGIAIDTLSWEFSVMGQ 468
++ P F + +K +++RSDPD +KTVL+QE ERYN LL + L L+K ++GLVV+TPELE I QA+L G VP++WS CYPSLKPLGSW +L R DQ+R WA +MP VFWL G TYP+GFLTALLQT+ARKNG++ID+L+WEF ++ Q
Sbjct: 372 DKVPDTFDLALVKLNISTRSDPDALKTVLVQELERYNKLLSTIKSSLVALEKGIQGLVVITPELEAIYQAMLIGAVPKAWSFCYPSLKPLGSWTMELEQRVDQMRHWANNSMPVVFWLSGFTYPTGFLTALLQTAARKNGVSIDSLNWEFLIINQ 526
BLAST of mRNA_H-paniculata_contig8254.16273.1 vs. uniprot
Match: A0A662YJI7_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJI7_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.130e-55 Identity = 90/159 (56.60%), Postives = 115/159 (72.33%), Query Frame = 1
Query: 4 EQTPKPFSIKDIKNTLASRSDPDPMKTVLLQEAERYNSLLLGVARQLADLKKAVKGLVVVTPELEDISQALLQGKVPQSWSKCYPSLKPLGSWMRDLIVRADQIREWALTAMPKVFWLPGMTYPSGFLTALLQTSARKNGIAIDTLSWEFSVMGQDTSA 480
E P F + IK L++R++PD +KTVLLQE ERYN LL + + L+K ++G VV+TPELE + ALL G VP +W CYPSLKPLG W +DL +R +Q+ WAL A P VFWL G TYP+GFLTALLQT+ARKNG+AID+L+WEF V+ Q +A
Sbjct: 166 EAVPDVFDLPSIKLGLSARAEPDALKTVLLQELERYNKLLATINSSVRALEKGIQGSVVITPELEAVYNALLLGAVPTAWGFCYPSLKPLGPWTQDLKLRCEQMTRWALHAQPAVFWLAGFTYPTGFLTALLQTAARKNGLAIDSLNWEFLVLSQPENA 324 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8254.16273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8254.16273.1 >prot_H-paniculata_contig8254.16273.1 ID=prot_H-paniculata_contig8254.16273.1|Name=mRNA_H-paniculata_contig8254.16273.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp AEQTPKPFSIKDIKNTLASRSDPDPMKTVLLQEAERYNSLLLGVARQLADback to top mRNA from alignment at H-paniculata_contig8254:7832..9838+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8254.16273.1 ID=mRNA_H-paniculata_contig8254.16273.1|Name=mRNA_H-paniculata_contig8254.16273.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2007bp|location=Sequence derived from alignment at H-paniculata_contig8254:7832..9838+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8254:7832..9838+ >mRNA_H-paniculata_contig8254.16273.1 ID=mRNA_H-paniculata_contig8254.16273.1|Name=mRNA_H-paniculata_contig8254.16273.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=972bp|location=Sequence derived from alignment at H-paniculata_contig8254:7832..9838+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |