mRNA_H-paniculata_contig8236.16255.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8236.16255.1 vs. uniprot
Match: D7FQX4_ECTSI (ATP-binding cassette, sub-family D, member 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX4_ECTSI) HSP 1 Score: 599 bits (1544), Expect = 1.630e-187 Identity = 450/1112 (40.47%), Postives = 557/1112 (50.09%), Query Frame = 1
Query: 1 QVLWRSLIVVTTIAALKAIRKVSKECCALVWRQGLVSYLHECYIRGIIPYVLSSTEAGRGRISGGN-GHGKRXXXXXXXXXXXXXXXXXXXXXXXXXDNPDQRVTADAAALTTAFADVVHATLIVPCLVVYYTWYLVGFFGWTAPVACYMYFILASAVNWSLVKRVVPAVYEQEKAEGRFRYDHAWLRTHSESVAFYGVEAVEGRERERLGKSFDEVVTSSWAVIRRHVPLYLFTQFFDYLGSIINYAAVGGAIVYLSKADGMSSSEISALVARGSYSCLYLINAFSQGLKASKAASRVGGSAGRVAELFRATGFSDEDARMLSPWSTSGTPKVAAFRSRISSSHWNDDPIAGHVGETTQTRRATGNKHRRIKATTAMPKPAGGMVWSFWFRWLWRR-TTSTGASSGTDQRLPRGEGERLYGSIDYDDIHNHHGRSILEEQLEDEEC---GYEHGEYFPPG-SCNPGHAEERTREESVPNVVSEVAAQFLAPGEDNTEHSSEC-VLAGHSPAGSGPRGPIAAG------------------------ADGGADDGDGDDDGWLLRLSGFTVRQPEHQRKDPGFDAQGDETAGERYPLATGEGAFVCVYEAAREVKGARGWGG------GADVVV-----DTTCMPVYLLCGRGGTSKLQRTG---LNSG--RFGRHDTDSLVNKLDLVVRKGEYLLVTGSSGCGKTSFIRSVAGIWEVPNGTIELGPVLRPKRRTLVGGGEMGHRWRSHNSRATPHRKSAKQEVMFLPQQPYCFRGTLLEQVTYPSQPDQALIPKAIAILEDLGLSHLLRLSKGRQGSLYRSPLVSLAGFSTDGVAFGGQNSPAGGAGAGDGGLHSMHIGAGGDGLARDAESSATNALLPACEEP--GDGGNGGSHGTGGSRSGTN----------------DSVLAVAVSPSSS----GRNTAAVGTNRG--------------------------------------------DAEEAGLAF-SPSAAAAAVICPTGAGERSRDWASILSPGEQQRLGIARILYHQPTLAFLDESTGAVSEATEDRVYRLMRAAGITVVAVGHRASLRELHDRVLSFAGPPGGQWDLSEL 2994
QVLWRSL+VVT +AALKA R ++KE CALVWRQ LV +LH Y+RG +PYVLS+ EAGR + G + G+ DNPDQRVTADA AL AFA V+H TL+ P LV +YTWYLVG FGW APVACY+YFI+ASA+NW++VK VVPAVY ++KAEG FRYDHAWLRTHSESV F GV AVEGRER+RLG+SF+ VVT+ W VIRRHVPLYLFTQFFDYLGSI+NYAAVGGAI+YLSKA+GM +EI+ALVARGS+SCLYLI+AFS+ L+AS+AASR+GGSA RVAEL RATG SD DAR PWST P V R ++ RR + + + W R WRR T+ + + + G G H R +DEEC G+ G+Y PP G AE R+ + VA + G +SE V G G G +A+ ADGG + +GDD GWLLR+ G+TV QPE Q GD+ + E +G+ A V A G GG G D VV +T P GRG S +RT L +G + G ++V +L L VR+G +L+TG SGCGKTS +R++AG+WE GT+EL P + R G G R R + V+F+PQ+PYCFRGTL EQVTYP++ DQA IL LGLSHL L G + G H++ A G L+ D +++ A P G G GG HG S D V S + G VG + + E G + S A + R RDWASILS GEQQRLGIAR+LYH+P LAFLDE+ AV+E E Y LMRAAG+TVVA+GHR SLR LH+RVL+ G P G W++SE+
Sbjct: 162 QVLWRSLLVVTVVAALKAGRDLAKEACALVWRQRLVLFLHSWYLRGKMPYVLSTGEAGRDKRGGASFGNVGAPGRVDGGCTRGGGNGVAAGGESPLIDNPDQRVTADAEALVAAFATVLHETLVAPGLVAFYTWYLVGMFGWVAPVACYVYFIVASAINWAVVKTVVPAVYWKDKAEGTFRYDHAWLRTHSESVVFCGVGAVEGRERDRLGESFNAVVTAWWEVIRRHVPLYLFTQFFDYLGSIVNYAAVGGAILYLSKAEGMGEAEIAALVARGSFSCLYLIDAFSKALRASEAASRMGGSARRVAELLRATGLSDSDARAFGPWSTE--PSV---RRPSRNNXXXXXXXXXXXXXXXXXXXXXXXXXRRARGARGARSSSNALTAVVWSRLGWRRFLTAVKKEADKEDEMEVGRG---------------HKRGRDARDADDEECPREGHHSGDYTPPVVGTGGGEAEGRS--------LLAVAGGTSSGGHPAGRSASEDGVFVGDRECSRG-SGYVASALSAXXXXXXXXXXXXXXDEGREDEADGGGGEREGDDPGWLLRVEGYTVAQPEQQL------GLGDDCSSEEDD-DSGDDADVTDPREEAVDGDANGSGGDDTRGVGVDRVVSPKDGETLASPGAGRGGRGSRSNNRRTARGTLAAGAEQHGSRGAGAIVRELSLTVRRGHNVLITGPSGCGKTSLLRTIAGLWEAAAGTVELCPRVEACLRAHEERGTTGRR------RPVAGDREVGGGVLFVPQRPYCFRGTLFEQVTYPARGDQASPATVKRILSALGLSHLFSLGNGXXXXXXXACTEQRXXXXXXGSTG-----------------HALD--ASGSTLSGDTRRRLSSSSWTASAAPRAGAGAFGGPHGFDDRSSSRQAXXXXXXXXXGSIRIKDDVXXXXXXESITSPLIGDEAETVGFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSHVREGETTGRSTRSGGAVGRRIKRGLPPARRRRDWASILSIGEQQRLGIARVLYHRPALAFLDEAMSAVTEEAERDAYGLMRAAGVTVVAIGHRTSLRSLHERVLALRGAPDGTWEISEM 1212
BLAST of mRNA_H-paniculata_contig8236.16255.1 vs. uniprot
Match: A0A6H5KC31_9PHAE (ABC transporter domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC31_9PHAE) HSP 1 Score: 431 bits (1108), Expect = 4.380e-128 Identity = 366/961 (38.09%), Postives = 455/961 (47.35%), Query Frame = 1
Query: 472 NWSLVKRVVPAVYEQEKAEGRFRYDHAWLRTHSESVAFYGVEAVEGRERERLGKSFDEVVTSSWAVIRRHVPLYLFTQFFDYLGSIINYAAVGGAIVYLSKADGMSSSEISALVARGSYSCLYLINAFSQGLKASKAASRVGGSAGRVAELFRATGFSDEDARMLSPWSTSGTPKVAA-FRSRISSSHWNDDPIAGHVGETTQT---------------RRATGNKHRRIKATTAMPKPAGGMVWSF--WFRWLWRRTTSTGASSGTDQRLPRGEGERLYGSIDYDDIHNHHGRSILEEQLEDEEC----GYEHGEYFPPG-SCNPGHAEERTREESVPNVVS-------EVAAQFLAPGEDNTEHSSECVLAGHSPAGSGPRGPIAAGADGGADDGDGDDDGWLLRLSGFTVRQPEHQRKDPGFDAQGDETAGERYPLATGEGAFVCVYEAAREVKGARGWGGGAD---VVVDTTCMPV---YLLC------GRGGTSKLQRTG---LNSG--RFGRHDTDSLVNKLDLVVRKGEYLLVTGSSGCGKTSFIRSVAGIWEVPNGTIELGPVLRPKRRTLVGGGEMGHRWRSHNSRATPHRKSAKQEVMFLPQQPYCFRGTLLEQVTYPSQPDQALIPKAIAILEDLGLSHLLRLSKGRQGSLYRSPLVSLAGFSTDGVAFGGQNSPAGGAGAGDG---------GLHSMHIGAGGDGLARD-------------------------------------AESSATNALLPACEEPGDGGNGGSHGTGGSR------------SGTN---------------DSVLAVAVSPSSSGRNTAAVGTNRGDAEEAGLAFSPSAAAAAVICPTGAGERSRDWASILSPGEQQRLGIARILYHQPTLAFLDESTGAVSEATEDRVYRLMRAAGITVVAVGHRASLRELHDRVLSFAGPPGGQWDLSEL 2994
+W++VK VVPAVY ++KAEG FRYDHAWLRTHSESV F GV AVEGRER+RLG+SFD VV + W +IRRHVPLYLFTQFFDYLGSI+NYAAVGGAI+YLSKA+GM +EI+ALVARGS+SCLYLI+AFS+ L+AS+AASR+GGSA RVAEL RA G SD DAR PWST P+V FR+ R A G A +A+ VWS W R+L A D + RG + R +DEEC + G+Y PP G AEER+ S + ++ G+ S V + S G A ADGG + GDD WLLR+ G+TV QPE Q GD+ + E + E E A V G GG + V VD P L C GRG S RT L +G + G ++V +L L VR+G +L+TG SGCGKTS +R++AG+WE GT+EL P + R G G R + A V+F+PQ+PYCFRGTL EQVTYP++ DQA IL LGLSHL L G + + G +G A +GD + GAG G E S T+ L+ E + S GG +GT S + A + S R+ AVG R + GL P A R R+WASILS GEQQRLGIAR+LYH+P LAFLDE+ AV+E E YRLMRAAG+TVVA+GHR SLR LH+RVL+ G P G+W++SE+
Sbjct: 23 SWAVVKTVVPAVYRKDKAEGTFRYDHAWLRTHSESVVFCGVGAVEGRERDRLGESFDVVVAAWWELIRRHVPLYLFTQFFDYLGSIVNYAAVGGAILYLSKAEGMGEAEIAALVARGSFSCLYLIDAFSKVLRASEAASRMGGSARRVAELLRAAGLSDSDARAFGPWSTE--PRVRRPFRNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGARGGARSSSNALSAV-------VWSRLGWIRFL--AAAKKEADKEDDMEVGRG-----------------YKRGRDARDADDEECPREGNHSGGDYTPPVVGTGGGEAEERSLLAVAGGTSSGGHPAGRSASEDGVSVGDHECSSGSGYVASALSLVALSDEGREGA-ADGGGGERVGDDPDWLLRVEGYTVAQPEQQL------GLGDDCSSEEDDDSGDEANGTDPREEA--VDGDANGSGGDNTRGVGVDRVVSPEDGKALPCPGEGGGGRGRRSNNPRTACGTLAAGAEQHGSRGAGAIVRELSLTVRRGCNVLITGPSGCGKTSLLRTIAGLWEAAAGTVELCPRVEACLRAHEERGTTGR------GRTVAGDREAGGGVLFVPQRPYCFRGTLFEQVTYPARGDQASPATVKRILSALGLSHLSSLGNGXXXXXXXXXCTEQTNGGSSAGSTGHALGASGNAFSGDARRCPSPSWTASAASRAGAGAFGSPHGFDDRSSSRQVRXXXXXXXXXXXXXXXXXXXXXXXXXXXEESITSPLIGEEPETAETAGFSSSSAGGGDFPTPSEGSKERGAGTRWLSDTRQSSHXXXXXXSHVREAETTGRSARSGGAVGRKR----KRGL---PPA------------RRRRNWASILSIGEQQRLGIARVLYHRPALAFLDEAMSAVTEEAERDAYRLMRAAGVTVVAIGHRTSLRSLHERVLALRGAPDGRWEISEM 921
BLAST of mRNA_H-paniculata_contig8236.16255.1 vs. uniprot
Match: A0A836CDC0_9STRA (ABC transporter transmembrane region 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDC0_9STRA) HSP 1 Score: 310 bits (794), Expect = 7.790e-86 Identity = 300/1009 (29.73%), Postives = 380/1009 (37.66%), Query Frame = 1
Query: 4 VLWRSLIVVTTIAALKAIRKVSKECCALVWRQGLVSYLHECYIRGIIPYVLSSTEAGRGRISGGNGHGKRXXXXXXXXXXXXXXXXXXXXXXXXXDNPDQRVTADAAALTTAFADVVHATLIVPCLVVYYTWYLVGFFGWTAPVACYMYFILASAVNWSLVKRVVPAVYEQEKAEGRFRYDHAWLRTHSESVAFYGVEAVEGRERERLGKSFDEVVTSSWAVIRRHVPLYLFTQFFDYLGSIINYAAVGGAIVYLSKADGMSSSEISALVARGSYSCLYLINAFSQGLKASKAASRVGGSAGRVAELFRATGFSDEDARMLSPWSTSGTPKVAAFRSRISSSHWNDDPIAGHVGETTQTRRATGNKHRRIKATTAMPKPAGGMVWSFWFRWLWRRTTSTGASSGTDQRLPRGEGERLYGSIDYDDIHNHHGRSILEEQLEDEECGYEHGEYFPPGSCNPGHAEERTREESVPNVVSEVAAQFLAPGEDNTEHSSECVLAGHSPAGSGPRGPIAAGADGGADDGDGDDDGWLLRLSGFTVRQPEHQRKDPGFDAQGDETAGERYPLATGEGAFVCVYEAAREVKGARGWGGGADVVVDTTCMPVYLLCGRGGTSKLQRTGLNSGRFGRHDTDSLVNKLDLVVRKGEYLLVTGSSGCGKTSFIRSVAGIWEVPNGTIE----LGPVLRPKRRTLVGG--GEMGHRWRSHNSRATPHRKSAKQEVMFLPQQPYCFRGTLLEQVTYPSQPDQALIPKAIA------ILEDLGLSHLLRLSKGRQGSLYRSPLVSLAGFSTDGVAFGGQNSPAGGAGAGDGGLHSMHIGAGGDGLARDAESSATNALLPACEEPGDGGNGGSHGTGGSRSGTNDSVLAVAVSPSSSGRNTAAVGTNRGDAEEAGLAFSPSAAAAAVICPTGAGERSRDWASILSPGEQQRLGIARILYHQPTLAFLDESTGAVSEATEDRVYRLMRAAGITVVAVGHRASLRELHDRVLSFAGPPGGQWDLSEL 2994
VLWRS++VV + L+A R + E CAL WR LV YLH Y+RG +PY L T AG XXXXXXXXXXXXXXX DNPDQR+ +DAAALTTA +V+ TL+VP L+ YYTWY+ FGW AP ACY YF LA A+N +++RVVP VYE E+ EG FRY HAWLR ++E+VAFYG A ER RLG F+ V + W V+ H+PLY QFFDY+GSI+NYAAVG +I YL+KA S +EIS+L+ARGSYSCLY+INAFS GL AS + + V SAGRV EL GF+ + LSP+ P++ D P A +E+ A LL L TV +P +AG A G+ A+ R GT +L+ L L V +GE++L+ G+SGCGKTS +R VAG+WE GT+ G + GG G+ G + + +MFLPQ+PY F GTL +QV YP + A + A IL+ L LSHLLR G AG ER DW ++LSPGE QRL +AR LYH+P L LDE+T A+ E E +RAAG T+V+ GHRA+LR H R L AG G W +++L
Sbjct: 199 VLWRSMLVVAVVGTLRACRDFACEACALQWRCNLVRYLHAHYLRGTVPYQL--TRAGX---------------------XXXXXXXXXXXXXXXVDNPDQRIVSDAAALTTAMGEVIQKTLVVPGLLAYYTWYVAALFGWVAPAACYAYFALAGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDARWRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELLCGAGFTAAASAKLSPYDR---PEL-------------DIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------XXDEAAXXXXXXXXXXXXA----------------------------------------------LLTLRNVTVARP---------------SAG---GCAGGDSAWF-----------------------------------RNGTEXXXXXXXXXX-------GNLITDLSLSVAEGEHVLICGASGCGKTSLLRVVAGLWEPRGGTVRHCGSSGXXXXXXAQNWSGGARGDGGGEYEC-------------ERIMFLPQKPYTFVGTLADQVVYPREWRDAAVACAAGRARVADILQQLRLSHLLRYG----GXXXXXXXXXSAGL----------------------------------------------------------------------------------------------------------------------------ERVADWPNVLSPGEAQRLALARALYHRPRLLLLDEATSALGEDAEADAMARLRAAGATLVSAGHRATLRRFHARALVLAGDAAGSWGVADL 840
BLAST of mRNA_H-paniculata_contig8236.16255.1 vs. uniprot
Match: A0A6H5KJY9_9PHAE (ABC transmembrane type-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY9_9PHAE) HSP 1 Score: 161 bits (408), Expect = 7.320e-40 Identity = 87/158 (55.06%), Postives = 102/158 (64.56%), Query Frame = 1
Query: 4 VLWRSLIVVTTIAALKAIRKVSKECCALVWRQGLVSYLHECYIRGIIPYVLSSTEAGRGRISGGNGHGKRXXXXXXXXXXXXXXXXXXXXXXXXXDNPDQRVTADAAALTTAFADVVHATLIVPCLVVYYTWYLVGFFGWTAPVACYMYFILASAVNW 477
VLWRSL+VVT +AALKA R ++KE CALVWRQ LV +LH Y+RG +PYVLS+ EAGR + G DNPDQRVTADA AL AFA V+H TL+ P LV +YTWYLV FGW APVACY+YFI+ASA+NW
Sbjct: 180 VLWRSLLVVTVVAALKAGRDLAKEACALVWRQRLVLFLHSWYLRGKMPYVLSTGEAGRDK------RGAASFGVDGGGTRGGGDGVAAGGDSMLIDNPDQRVTADAEALVAAFATVLHETLVAPGLVAFYTWYLVSMFGWVAPVACYVYFIVASAINW 331
BLAST of mRNA_H-paniculata_contig8236.16255.1 vs. uniprot
Match: A0A673LY69_9TELE (ATP-binding cassette sub-family D member 4-like n=2 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673LY69_9TELE) HSP 1 Score: 125 bits (314), Expect = 1.630e-26 Identity = 83/278 (29.86%), Postives = 129/278 (46.40%), Query Frame = 1
Query: 91 WRQGLVSYLHECYIRGIIPYVLSSTEAGRGRISGGNGHGKRXXXXXXXXXXXXXXXXXXXXXXXXXDNPDQRVTADAAALTTAFADVVHATLIVPCLVVYYTWYLVGFFGWTAPVACYMYFILASAVNWSLVKRVVPAVYEQEKAEGRFRYDHAWLRTHSESVAFYGVEAVEGRERERLGKSFDEVVTSSWAVIRRHVPLYLFTQFFDYLGSIINYAAVGGAIVYLSKADGMSSSEISALVARGSYSCLYLINAFSQGLKASKAASRVGGSAGRVAEL 924
WR+ L LH Y G + Y L+ DNPDQR++ D L + + LI P V YYT+ GW V+ + YF++ S +N L+ +V + EQEK EG FR+ H +R ++ES AFY V E R + ++++ +++ + + LY+ FDYLGSI++Y + I + DG++ E+SALV++ ++ C+YLIN F+Q + S S V G R+ EL
Sbjct: 74 WRKSLTEELHSTYFNGHVYYTLN-------------------------------------VLCKDIDNPDQRISQDVERLCKQMSTMASRLLISPFTVTYYTYQCFNSAGWIGFVSIFGYFVVGSIINKILIGPIVSMLVEQEKLEGDFRFKHMQIRVNAESAAFYRAGKV---EHMRTDRRLQMLLSTQRSLMNKELWLYIGVNTFDYLGSILSYILIAIPI-FAGDYDGLTPGELSALVSKNAFVCIYLINCFTQLIDLSTTVSDVAGYTHRIGEL 310
BLAST of mRNA_H-paniculata_contig8236.16255.1 vs. uniprot
Match: A0A673M1R2_9TELE (ATP-binding cassette sub-family D member 4-like n=4 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673M1R2_9TELE) HSP 1 Score: 125 bits (314), Expect = 1.860e-26 Identity = 83/278 (29.86%), Postives = 129/278 (46.40%), Query Frame = 1
Query: 91 WRQGLVSYLHECYIRGIIPYVLSSTEAGRGRISGGNGHGKRXXXXXXXXXXXXXXXXXXXXXXXXXDNPDQRVTADAAALTTAFADVVHATLIVPCLVVYYTWYLVGFFGWTAPVACYMYFILASAVNWSLVKRVVPAVYEQEKAEGRFRYDHAWLRTHSESVAFYGVEAVEGRERERLGKSFDEVVTSSWAVIRRHVPLYLFTQFFDYLGSIINYAAVGGAIVYLSKADGMSSSEISALVARGSYSCLYLINAFSQGLKASKAASRVGGSAGRVAEL 924
WR+ L LH Y G + Y L+ DNPDQR++ D L + + LI P V YYT+ GW V+ + YF++ S +N L+ +V + EQEK EG FR+ H +R ++ES AFY V E R + ++++ +++ + + LY+ FDYLGSI++Y + I + DG++ E+SALV++ ++ C+YLIN F+Q + S S V G R+ EL
Sbjct: 62 WRKSLTEELHSTYFNGHVYYTLN-------------------------------------VLCKDIDNPDQRISQDVERLCKQMSTMASRLLISPFTVTYYTYQCFNSAGWIGFVSIFGYFVVGSIINKILIGPIVSMLVEQEKLEGDFRFKHMQIRVNAESAAFYRAGKV---EHMRTDRRLQMLLSTQRSLMNKELWLYIGVNTFDYLGSILSYILIAIPI-FAGDYDGLTPGELSALVSKNAFVCIYLINCFTQLIDLSTTVSDVAGYTHRIGEL 298
BLAST of mRNA_H-paniculata_contig8236.16255.1 vs. uniprot
Match: A0A3P8W4A5_CYNSE (ATP binding cassette subfamily D member 4 n=3 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8W4A5_CYNSE) HSP 1 Score: 127 bits (319), Expect = 2.510e-26 Identity = 80/279 (28.67%), Postives = 129/279 (46.24%), Query Frame = 1
Query: 91 WRQGLVSYLHECYIRGIIPYVLSSTEAGRGRISGGNGHGKRXXXXXXXXXXXXXXXXXXXXXXXXXDNPDQRVTADAAALTTAFADVVHATLIVPCLVVYYTWYLVGFFGWTAPVACYMYFILASAVNWSLVKRVVPAVYEQEKAEGRFRYDHAWLRTHSESVAFYGVEAVEGRERERLGKSFDEVVTSSWAVIRRHVPLYLFTQFFDYLGSIINYAAVGGAIVYLSKADGMSSSEISALVARGSYSCLYLINAFSQGLKASKAASRVGGSAGRVAELF 927
WR+ L LH Y +G + Y L+ DNPDQR++ DA L + + ++ P + YYT++ GW PV+ + YF++ + N L+ +V ++EQEK EG FR+ H +R ++ES AFY V E R + ++ + +I + + LY+ FDYLG ++Y + I + DG+S E+SAL+++ ++ C+YLIN F+Q + S S V G R+ EL
Sbjct: 125 WRKTLTESLHTAYFQGRVYYTLNVLRE-------------------------------------DIDNPDQRISQDAERLCKQMSSMASRLIVSPFTLTYYTYHCYYSTGWIGPVSIFGYFLIGTIANKILMGPIVSTLFEQEKLEGDFRFKHMQIRVNAESAAFYRAGKV---EHMRTNRRLQALLQTQTTLINKELWLYIGVNMFDYLGGFLSYVIIAIPI-FTGVYDGLSPGELSALISKNAFVCIYLINGFTQIIDLSTTLSDVAGYTHRIGELI 362
BLAST of mRNA_H-paniculata_contig8236.16255.1 vs. uniprot
Match: A0A8D3BS93_SCOMX (ABC transmembrane type-1 domain-containing protein n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3BS93_SCOMX) HSP 1 Score: 125 bits (314), Expect = 3.460e-26 Identity = 80/278 (28.78%), Postives = 131/278 (47.12%), Query Frame = 1
Query: 91 WRQGLVSYLHECYIRGIIPYVLSSTEAGRGRISGGNGHGKRXXXXXXXXXXXXXXXXXXXXXXXXXDNPDQRVTADAAALTTAFADVVHATLIVPCLVVYYTWYLVGFFGWTAPVACYMYFILASAVNWSLVKRVVPAVYEQEKAEGRFRYDHAWLRTHSESVAFYGVEAVEGRERERLGKSFDEVVTSSWAVIRRHVPLYLFTQFFDYLGSIINYAAVGGAIVYLSKADGMSSSEISALVARGSYSCLYLINAFSQGLKASKAASRVGGSAGRVAEL 924
WR+ L LH Y +G + Y L+ DNPDQR++ DA L + + ++ P + YYT++ + GW PV+ + YF++ + N L+ +V ++EQEK EG FR+ H +R ++ES AFY V E R + ++ + ++I + + LY+ FDYLG ++Y + I + DG+S E+SAL+++ ++ C+YLIN F+Q + S S V G RV E+
Sbjct: 71 WRKTLTESLHTAYFQGRVYYTLNVLRK-------------------------------------DIDNPDQRISQDAERLCKQMSTMASRLIVSPFTLTYYTYHCLHSTGWIGPVSIFGYFVVGTIANKILMGPIVATLFEQEKLEGDFRFKHMQIRVNAESAAFYRAGKV---EHMRTNRRLQALLQTQTSLINKELWLYIGVNTFDYLGGFLSYIIIAIPI-FTGIYDGLSPGELSALISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTHRVDEM 307
BLAST of mRNA_H-paniculata_contig8236.16255.1 vs. uniprot
Match: A0A672LE88_SINGR (ATP binding cassette subfamily D member 4 n=17 Tax=Cyprinoidei TaxID=30727 RepID=A0A672LE88_SINGR) HSP 1 Score: 126 bits (317), Expect = 3.950e-26 Identity = 83/278 (29.86%), Postives = 130/278 (46.76%), Query Frame = 1
Query: 91 WRQGLVSYLHECYIRGIIPYVLSSTEAGRGRISGGNGHGKRXXXXXXXXXXXXXXXXXXXXXXXXXDNPDQRVTADAAALTTAFADVVHATLIVPCLVVYYTWYLVGFFGWTAPVACYMYFILASAVNWSLVKRVVPAVYEQEKAEGRFRYDHAWLRTHSESVAFYGVEAVEGRERERLGKSFDEVVTSSWAVIRRHVPLYLFTQFFDYLGSIINYAAVGGAIVYLSKADGMSSSEISALVARGSYSCLYLINAFSQGLKASKAASRVGGSAGRVAEL 924
WR+ L LH Y +G + Y L+ DNPDQR++ D L + + LI P V YYT+ GW V+ + YF++ S +N L+ +V + EQEK EG FR+ H +R ++ES AFY V E R + ++++ +++ + + LY+ FDYLGSI++Y + I + DG++ E+SALV++ ++ C+YLIN F+Q + S S V G R+ EL
Sbjct: 117 WRKSLTEELHSTYFKGRVYYTLN-------------------------------------VLCKDIDNPDQRISQDVERLCKQMSTMASRLLISPFTVTYYTYQCFNSAGWIGFVSIFGYFVVGSIINKILIGPIVSMLVEQEKLEGDFRFKHMQIRVNAESAAFYRAGKV---EHMRTNRRLQMLLSTQRSLMNKELWLYVGVNTFDYLGSILSYIVIAIPI-FAGDYDGLTPGELSALVSKNAFVCIYLINCFTQLIDLSTTVSDVAGYTHRIGEL 353
BLAST of mRNA_H-paniculata_contig8236.16255.1 vs. uniprot
Match: A0A671KLT6_9TELE (ATP-binding cassette sub-family D member 4-like n=5 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671KLT6_9TELE) HSP 1 Score: 126 bits (317), Expect = 3.980e-26 Identity = 83/278 (29.86%), Postives = 130/278 (46.76%), Query Frame = 1
Query: 91 WRQGLVSYLHECYIRGIIPYVLSSTEAGRGRISGGNGHGKRXXXXXXXXXXXXXXXXXXXXXXXXXDNPDQRVTADAAALTTAFADVVHATLIVPCLVVYYTWYLVGFFGWTAPVACYMYFILASAVNWSLVKRVVPAVYEQEKAEGRFRYDHAWLRTHSESVAFYGVEAVEGRERERLGKSFDEVVTSSWAVIRRHVPLYLFTQFFDYLGSIINYAAVGGAIVYLSKADGMSSSEISALVARGSYSCLYLINAFSQGLKASKAASRVGGSAGRVAEL 924
WR+ L LH Y +G + Y L+ DNPDQR++ D L + + LI P V YYT+ GW V+ + YF++ S +N L+ +V + EQEK EG FR+ H +R ++ES AFY V E R + ++++ +++ + + LY+ FDYLGSI++Y + I + DG++ E+SALV++ ++ C+YLIN F+Q + S S V G R+ EL
Sbjct: 110 WRKSLTEELHSTYFKGRVYYTLN-------------------------------------VLCKDIDNPDQRISQDVERLCKQMSTMASRLLISPFTVTYYTYQCFNSAGWIGFVSIFGYFVVGSIINKILIGPIVSMLVEQEKLEGDFRFKHMQIRVNAESAAFYRAGKV---EHMRTDRRLQMLLSTQRSLMNKELWLYIGVNTFDYLGSILSYIVIAIPI-FAGDYDGLTPGELSALVSKNAFVCIYLINCFTQLIDLSTTVSDVAGYTHRIGEL 346 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8236.16255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8236.16255.1 >prot_H-paniculata_contig8236.16255.1 ID=prot_H-paniculata_contig8236.16255.1|Name=mRNA_H-paniculata_contig8236.16255.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=851bp MYFILASAVNWSLVKRVVPAVYEQEKAEGRFRYDHAWLRTHSESVAFYGVback to top mRNA from alignment at H-paniculata_contig8236:2..9774- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8236.16255.1 ID=mRNA_H-paniculata_contig8236.16255.1|Name=mRNA_H-paniculata_contig8236.16255.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9773bp|location=Sequence derived from alignment at H-paniculata_contig8236:2..9774- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8236:2..9774- >mRNA_H-paniculata_contig8236.16255.1 ID=mRNA_H-paniculata_contig8236.16255.1|Name=mRNA_H-paniculata_contig8236.16255.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5106bp|location=Sequence derived from alignment at H-paniculata_contig8236:2..9774- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |