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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 469 |
| Cds size | 279 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8208.16234.1 >prot_H-paniculata_contig8208.16234.1 ID=prot_H-paniculata_contig8208.16234.1|Name=mRNA_H-paniculata_contig8208.16234.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp
MADNGGRNSPRFAPTAKADLASFVGAPPPLPPPHQSQVQPHNTRQQPQLL
GYPHHNHSPGQQHEQQQQQQQQQQPVPSAPAPQQQQQQQQQQQ back to topmRNA from alignment at H-paniculata_contig8208:6727..10633+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig8208.16234.1 ID=mRNA_H-paniculata_contig8208.16234.1|Name=mRNA_H-paniculata_contig8208.16234.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3907bp|location=Sequence derived from alignment at H-paniculata_contig8208:6727..10633+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCTGTTCCTACTAGGAGAGAGCAACTGGCATTGAGGAAGAAGGAGGGTGA
GTTTATACTGGATAAGATCAGAATAAGGTTGTTTCAGTTGGAGATGAAGG
TCGCAATCAGAGCTCGACACCAAGCGATCTCGGTTAACGGTTGGACTATA
AATGTCACAAGGATCCCCTGAAAAAAGAGTAGGAGTGAACAGAGATCGAA
TAAGGGTCCGTCTGGTTGGGACGAGAAGTGAGGCATCTGTTTGTTGGGTG
GGGGGAAACTTCAGGCGTTTGTGAATCGCTCCATGGTCCTTAGCCTCCTC
TACTTTTTACCCTTGTTTTTCTCAACTTACCTCTTGTACCTCGTTGTTGT
GTCAAATACTGACTGACTGTATTTCTTTGTTTACTTTTCTACACCTCACC
GATATACCTCTACTGTCGGTAAAACACGGATTTGGTTCAGTCCCGATACG
CACGGCTAGCGCTTGGTTAGGCCGTCACCGACTAACAAAGCGGGTAACTC
ATGTATGTATGTGTGTATGTGAATAGCTGTTTGCGAGCTACTCACCCAGC
GTGTTGTACTGTGTGTCGATAGACTTGAAGGGCCCAGGGAAAGAGTATGT
GTACAAGCGTGAAGCAGCAGTTATACAGACGGCTGTATTTTGGGCCTTCT
TATTGGCTAAAGGCATGTCGACACGCTCTCGTGTTTTTTCTCGTTCTCCT
CCTCTTTTGTTCGATTTTGCTCTCTTGTTTGTTGCCAGTCCGCGGGCGGT
AAAGTGCAGAGGTTATGTCGGGAATATCGTTGCGGAAAAGGAAATGATTA
TTGACTACCAAAACTGTACCCATATTGCACTTATTCATTTCTGAAATTCA
AAGTTTCTTGGAAAATAAGAAAAAATGGGGAGGAGGGGATAACAAATGGG
TAAGGTCAACTTTTATGCCGATCGAAATCGAAATTGAAACTCGATCACAG
TCGATGTATCTGGTTTGGCCACAATTTGTACCAAAATTCCGAAGTAGGCT
ATGTTATGTGAGGTCGTGATCGAAATGCAATTCCTTTTCTTTTTTTTAAT
ACAAAGCCATCAGCACAAAGGCAATGCAACGGTGAATAGAAGTCACCTAT
AACGAAGTTGCCACCCATACAAAAGTACGGGCGACGATGAGAATTATTGG
TGCACATTACCGCACACCTTCGACGTTCCGCCACGCCTTCTTAGCACATC
CCACGCCGATGTGTGCATGCAGGTTCCAGTACAGGCAGCAATACAAATGT
TCGAGGTGCAACATCACCGTGCGTAATCAACGCCCTCGGCCCGTCGTCAG
ATAGATGATGAATCAGTGTGCGTGGTAGATTTGAGCCATGTTGTAAGGAG
GTAGCGCCGCCCAGACTACGTACAGCCTTCTCCTCGTGTGATGTAGGCAC
CGGTATGTTGATGGTTCAGTATAAATACAGAGAGCAGGTTATTACGCCAC
ACAAAAACGCGCCTCCTTGTCCATCCAACAGCAATTCGTATCAGTTCGAT
TCGGACATGAAACTTGGACAAAATTCTTACAAGATATGCGGCGATGATGA
CGATGCTGGCGGCGTTAGACCGCCTAGGTCGTTCGAACATTTTAGTGCCA
CAAGGTTGTTATTTCTGCGGTGAACAGCTAAATAGATACATTATAACATG
AAACACACACACACACACACACCGCAAAAGTTGACGTCTGACTCACGCAG
CATTGCAAGCTATAATAACTTCGCCGTATCATTCTCATCCTTAAGCGAGG
TCATTATCCAAATATGTCCCTCCCTGTTGTGTAATTTCGAAAAAGCTCTT
CCTTAAATTTGAGATATATTGTGCTTTTTTTCAAACGCGAAAAGTGTGTT
AATGATATGCTCGAAACCCCGTGGATATTTCGCTGTGCATACCCCGGTCA
CGACATGTACTTGCAGCTGAGAAGCACAAATCGTTGTTGTCTCTGCTTCG
CACGTGTAAGGGATCACCTGTAGTGTCTGTCAGTAGCACCACTATTCAGG
TAATAGTATGCGCACGTCAGCCGTCGTTTGGGTCTAGTTTGGGCGAAAAA
AGACGGAAAGAGACGAAAAAACGCAAAATCTTCACTACAGTATTAGCGTC
AAGCTTACATCGCCAGTGCGCATGATTTCAGTTCCCTAGGCAGATCCTGC
ACATCTATTATCCGGAGTAGACCTAGACACGGGCAATATGGCGGCGACAC
CTCTCCACTGCGGCCGATTGTGGTCCAAGGAGGAGCACGGAAGAGCTTCC
GACCACAATGACGAATTGACCGCAGGGGTGTCGCCTGGAAGCAAGCTACC
CCTTGCCAGGCTCTTAAATTAACACATGCCTGTTGATGGACTGCAGGGCC
GCTACAGAGCACCATACGCTAAGCCATCATTACCAAATCTTCAATCTAGA
GGGACTCAGTGCCGAAAGGGATGAATGAAGTTGTTCGAAACACGTTTTTT
CAACCATAGAAATGAATTTGAGTAGCGCGAAAGGGATTTTGACGAAACAC
TCTAGCAGCAACTATTACAGTCCATCATCGTGACACATGAGTAAAATGGC
TTAACCATCCCACGTCGACACACAAGCAAGAACTGCATTTCTGTAGAATG
ACATATACGACCAAGTGCTTGTGACAGCAACTATCCCACTCTGCGTATTT
TATTAGTGCCGGTACTCCGAGAAATCGATGGGGGGGAGGGGGGGAGGGGG
CAAGGACGGGGGGCGGAGGGCTTCAAATTTTCCGTAGGCACGTTTGTTCG
TTGAGCCCCGTAGTGCTTCCTTCGATTTTCGAGACGCTACCATCAGGCAA
CCTTGCTCGCGCGGTAGCATGTGTGGAGTTGAACTGTTTTGGCTATCGTT
AACGTAGTAACAATAGTCGAGCTATTGTGCACAGTCCGCGTATGTGTCTC
CTTGTGACCACGCAACAAGTTTCCCACAAAGTCCTATCCCAAACCCCCGA
CCCTTTCGCTCGCTAAACTGCAGTCGCAGCAGAATCGAGTCTGACTACAC
ACGACGCGCACGTGAAAGCTAGATCTTGTTTTGTTGCTAAACGCCGATAG
AGTACATAAAGGGCGTGAAAAGGAGGCATTTCGTGGCCTGCTACGCTTAC
TGCTTGTTTTGCGGCGATGGCGGATAACGGCGGCCGCAATTCACCTCGTT
TTGCCCCAACCGCAAAGGTGCGTTCGGATTCGGGAAGATAGTACTGTGTG
CACCTGCAAGAGTTTACAGCAGCGGACCAGTAGACGTGTGCAGAGTACAT
GGTATGGTACAGGGTACAGTTGTGTCCGCTGTGTGATGTATTACATGAAA
CATACGTTGGTGCCGATATATTTTTTTCCTTGTCTTTACGTCCTGTACGT
TTACTCGTATGTATGTATATATGTATGTGGGGGTTTCAGTGCTGTCTTCG
AGGCTAGCTCTACAGTACATGTGGTCGCTCGCTTTCCGGATTTGCCGCAT
TACTATTGTCGTTGTTCGTTTTTGTTGTCAAGGATGGCCTTGCTGCATGG
ATTTATGGTGGGGAGTTGACCTTCTTCGCCCCCCTGGTGTATAAAATGAC
AAGGGTGATGATGCAGCAAGTAGTCCTCGTCCAACAAGAAGTAATGTGAT
TATCAACTTTTGATAGCACAGCAGTTATGACTCACCCCTTTCTTGTGTAT
CCGCTCACGAACGTCACGCGGGGACGCAGGCGGACCTGGCATCGTTTGTA
GGCGCACCACCTCCTCTTCCGCCCCCCCACCAAAGCCAAGTCCAGCCACA
CAACACTCGACAACAGCCGCAGCTCCTTGGATATCCGCATCACAATCACA
GTCCCGGCCAGCAACATGAACAGCAGCAACAGCAACAGCAGCAGCAACAA
CCAGTACCATCAGCACCAGCACCACAACAACAACAACAACAACAACAGCA
GCAGCAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig8208:6727..10633+ >mRNA_H-paniculata_contig8208.16234.1 ID=mRNA_H-paniculata_contig8208.16234.1|Name=mRNA_H-paniculata_contig8208.16234.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=558bp|location=Sequence derived from alignment at H-paniculata_contig8208:6727..10633+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGGATAACGGCGGCCGCAATTCACCTCGTTTTGCCCCAACCGCAAA
GATGGCGGATAACGGCGGCCGCAATTCACCTCGTTTTGCCCCAACCGCAA
AGGCGGACCTGGCATCGTTTGTAGGCGCACCACCTCCTCTTCCGCCCCCC
CACCAAAGCCAAGTCCAGCCACACAACACTCGACAACAGCCGCAGCTCCT
TGGATATCCGCATCACAATCACAGTCCCGGCCAGCAACATGAACAGCAGC
AACAGCAACAGCAGCAGCAACAACCAGTACCATCAGCACCAGCACCACAA
CAACAACAACAACAACAACAGCAGCAGCAAGCGGACCTGGCATCGTTTGT
AGGCGCACCACCTCCTCTTCCGCCCCCCCACCAAAGCCAAGTCCAGCCAC
ACAACACTCGACAACAGCCGCAGCTCCTTGGATATCCGCATCACAATCAC
AGTCCCGGCCAGCAACATGAACAGCAGCAACAGCAACAGCAGCAGCAACA
ACCAGTACCATCAGCACCAGCACCACAACAACAACAACAACAACAACAGC
AGCAGCAA back to top
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