mRNA_H-paniculata_contig8202.16227.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8202.16227.1
Unique NamemRNA_H-paniculata_contig8202.16227.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig8202.16227.1 vs. uniprot
Match: D7G5C3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C3_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 4.260e-111
Identity = 193/311 (62.06%), Postives = 237/311 (76.21%), Query Frame = 2 
Query:   65 EEVQLHRAVKALLKHVKSSSSDGSGKQSLLEDEGQVVLAQLSLHKIPGHISPKPIRIPIPHSMRKQEDCEVCLFVKDDAKKGLKEALEKEPVKGLSKIIKLDKLRTQYKEFKARRELISQYDMFVCDDRILPMLTGVLGKTFLSAKKQPVPIKIFSKGCLLSLGAQIARARDSAFLVRSYGDCWCVKLAHTGMTEAEVSANLMAGIEAVVDKIPNKWKNIKAINIKSTDSVALPVYSNLGDLPPAPAAPQVKVVTDSATAAAGKGEGVEKGDASAKPEADGGQCNKKRKKQPRPLIRQQLKQIKQDLKDEK 997
            +E Q+ RA +ALLKHV SS++   GKQSL+EDEG+VVLAQ+SLHKIPG +  KP+ I IPH +RK+EDC++CL VKD+AK  +KE  EKEPV+GL+KIIKLDKLRTQYK+FK RREL+SQ+D+F+ DDRILPMLT  LGKTFL  KKQPVPIK+  +    S   QIARARDSAFLV S+GDCW VKLA+T MTE +V  NLM G+ AVV+KIP KWKN+KAINIK + SVALPVYSN+GDLPPAP+A +  V       AAG+GEG E    S           + +K++PRPLIRQQL ++K++ K EK
Sbjct:    5 DEAQVRRAARALLKHVNSSAA---GKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKDFKDRRELLSQFDLFLADDRILPMLTKALGKTFLKVKKQPVPIKLERRA---SFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMTGVAAVVEKIPRKWKNVKAINIKCSHSVALPVYSNIGDLPPAPSAKKATVAGKEE--AAGEGEGKEPNSHS-----------QAKKRKPRPLIRQQLNKLKEEAKAEK 296
[Close]
BLAST of mRNA_H-paniculata_contig8202.16227.1 vs. uniprot
Match: A0A7S2CVK6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVK6_9STRA)

HSP 1 Score: 194 bits (492), Expect = 6.480e-52
Identity = 106/234 (45.30%), Postives = 154/234 (65.81%), Query Frame = 2 
Query:   86 AVKALLK-HVKSSSSDGSGKQSLLEDEGQVVLAQLSLHKIPGHISPKPIRIPIPHSMRKQEDCEVCLFVKDDAKKGLKEAL-EKEPVKGLSKIIKLDKLRTQYKEFKARRELISQYDMFVCDDRILPMLTGVLGKTFLSAKKQPVPIKIFSKGCLLSLGAQIARARDSAFLVRSYGDCWCVKLAHTGMTEAEVSANLMAGIEAVVDKIPNKWKNIKAINIKSTDSVALPVYSNL 781
            AVKALL  H K + S+    + L   + + +L Q++L +IPG+ SPKPI++ +PH +    DC++CLF+K + K  +K  L E  PV+GL+KII LDKLRT Y  F  RREL++ YD+F+ D+RILPML   LGKTF S KKQP+P+ +       SL  ++ RARDS  L+   G C  V + +T MT  E+ AN++A   + ++ IP KWKNI+AI +K+ DS++LP+++ L
Sbjct:   66 AVKALLAFHKKKAESE----RKLPGADDERILIQITLQRIPGNSSPKPIQLSVPHPIHGDSDCQMCLFIKKEDKPLVKSLLMEDNPVEGLAKIITLDKLRTSYARFSQRRELLASYDLFLADERILPMLCKALGKTFFSRKKQPIPLCVTRHE---SLPHRVRRARDSTSLIIPSGTCVAVIVGNTNMTPKELVANIVAAASSAIEHIPRKWKNIQAIQVKTADSMSLPIFNKL 292
[Close]
BLAST of mRNA_H-paniculata_contig8202.16227.1 vs. uniprot
Match: A0A7S2SVD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVD8_9STRA)

HSP 1 Score: 181 bits (460), Expect = 5.730e-48
Identity = 114/235 (48.51%), Postives = 149/235 (63.40%), Query Frame = 2 
Query:   83 RAVKALLK-HVKSSSSDGSGKQSLLEDEGQVVLAQLSLHKIPGHISPKPIRIPIPHSMRKQEDCEVCLFVKDDAKKGLKEAL-EKEPVKGLSKIIKLDKLRTQYKEFKARRELISQYDMFVCDDRILPMLTGVLGKTFLSAKKQPVPIKIFSKGCLLSLGAQIARARDSAFLVRSYGDCWCVKLAHTGMTEAEVSANLMAGIEAVVDKIPNKWKNIKAINIKSTDSVALPVYSNL 781
            +A  ALL  H K+ ++ G     LL  E +V +  + L K+P   SPKPIR+P+ H +    DC++CLF+K + K  +KE L E +PV GL K+I LDKLRT Y  F+ RRELIS YD+F+ DDRILPML   LGKTF S KKQPVP++I  +G   +L   I RARDS +LV   G+   V + +T MT  ++  NL+A     VD IP KW N++AI IKS  SVALPV + L
Sbjct:    1 KAFDALLSYHEKAHAAGGD----LLGSEERVHVT-IVLKKVPSKASPKPIRLPLAHPLWSL-DCDMCLFMKTEDKPWVKELLMESKPVPGLKKVITLDKLRTSYARFERRRELISTYDLFLADDRILPMLCKTLGKTFFSRKKQPVPVRI-RRG---ALPQTIQRARDSTYLVLGGGNNVSVCIGNTSMTRKQLVENLLAATNEAVDHIPRKWANVQAIYIKSDSSVALPVLNKL 225
[Close]
BLAST of mRNA_H-paniculata_contig8202.16227.1 vs. uniprot
Match: A0A261XV02_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XV02_9FUNG)

HSP 1 Score: 177 bits (449), Expect = 4.080e-47
Identity = 101/242 (41.74%), Postives = 157/242 (64.88%), Query Frame = 2 
Query:   62 IEEVQLHRAVKALLKHVKSSSSDGSGKQSLLEDEGQVVLAQLSLHKIPGHISPKPIRIPIPHSMRKQEDCEVCLFVKDDAKKGLKEALEKEPVKGLSKIIKLDKLRTQYKEFKARRELISQYDMFVCDDRILPMLTGVLGKTFLSAKKQPVPIKIFSKGCLLSLGAQIARARDSAFLVRSYGDCWCVKLAHTGMTEAEVSANLMAGIEAVVDKIPNKWKNIKAINIKSTDSVALPVYSNLGD 787
            ++E Q H+AV AL+KHV    ++GS K  L E+   V L  ++  KI    + KP RIP+ HS+   +  EVCLF KD  +K  KE LEK+ VK ++K+I + KLR  YK F+A+R+L + YD+F+ DDR++P+L  ++GKTF   KKQP+P+ +       +L A+I RA  S +L  S G C  +K+  T  T  E+  NL+  +  V+DK+P KW+NI++++IK+++S++LP+Y++L D
Sbjct:    5 LDEKQAHKAVAALIKHV----TEGSKKNELFEEASYVWLL-IATKKI-SESNRKPARIPLKHSLY-GKGSEVCLFTKDP-QKDYKELLEKKGVKSVTKVIGVTKLRDNYKPFEAKRQLCNSYDVFLADDRVVPLLPKLIGKTFFDKKKQPIPVNLQRT----NLNAEINRAIGSTYLHPSSGSCLAIKIGTTTNTVQEILDNLLTALPFVIDKVPKKWRNIQSLHIKTSESLSLPIYNSLPD 234
[Close]
BLAST of mRNA_H-paniculata_contig8202.16227.1 vs. uniprot
Match: W7TFQ3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFQ3_9STRA)

HSP 1 Score: 184 bits (467), Expect = 6.490e-47
Identity = 110/259 (42.47%), Postives = 158/259 (61.00%), Query Frame = 2 
Query:   56 SRIEEVQLHRAVKALLKHV---KSSSSDGSGKQSLLEDE-GQVVLAQLSLHKIPGHISPKPIRIPIPHSMR-----KQEDCEVCLFVKDDAKKGLKEALEKEPVKGLSKIIKLDKLRTQYKEFKARRELISQYDMFVCDDRILPMLTGVLGKTFLSAKKQPVPIKIFSKGCLLS--------LGAQIARARDSAFLVRSYGDCWCVKLAHTGMTEAEVSANLMAGIEAVVDKIPNKWKNIKAINIKSTDSVALPVYSNL 781
            SR++  Q  RAV+ALL+H    ++  +    KQ LL  E G  +L Q++L KIP  +SPKP+ + +PH +        ED  VCL VK+  K  ++ AL    + G+ +++ L +LRT YKEF+ RR+L   +D+F+ DDRILP+L   LGKTF S KK PV +K+   G LLS        +G +I  A+    L R++G+C  VK+A T    AE  AN++AGIEA V+  P KWKN+ AI++K++ SVALP+Y  L
Sbjct:   52 SRVDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKL---GGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRL 307
[Close]
BLAST of mRNA_H-paniculata_contig8202.16227.1 vs. uniprot
Match: A0A7S0RBE1_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RBE1_9CHLO)

HSP 1 Score: 173 bits (439), Expect = 1.620e-45
Identity = 97/243 (39.92%), Postives = 148/243 (60.91%), Query Frame = 2 
Query:   59 RIEEVQLHRAVKALLKHVKSSSSDGSGKQSLLEDEGQVVLAQLSLHKIPGHISPKPIRIPIPHSMRKQEDCEVCLFVKD---DAKKGLKEALEKEPVKGLSKIIKLDKLRTQYKEFKARRELISQYDMFVCDDRILPMLTGVLGKTFLSAKKQPVPIKIFSKGCLLSLGAQIARARDSAFLVRSYGDCWCVKLAHTGMTEAEVSANLMAGIEAVVDKIPNKWKNIKAINIKSTDSVALPVYSN 778
            ++ + Q+ +AV ALLKH+   S+ G     L ED+ Q+    ++L + P   S KPIRI IP+ +   E  EVCLFVKD   +  K  KE ++     G++K+I + KL+  Y  F+A+R+L  QYD+F+ DDRILP L  ++GKTF   KKQP+P+ +  K      G QI  A ++ +  +S G C  V++A +   E E+  N+MA  E + D +P KWKN++A+ +K+ +SVALP+YS+
Sbjct:    6 KLSKSQVRKAVAALLKHIAKQSA-GKKNSQLFEDD-QIFNLVVALKRTPDQASNKPIRIEIPNPLHSAEGAEVCLFVKDHKGEGHKAAKERIKSMANSGVAKVIGMSKLKANYFTFEAKRKLCDQYDLFLADDRILPSLPKLIGKTFFKKKKQPIPVDLKKK----DWGLQIKMAVNATYTFQSEGSCMNVRVARSSQEEDEIVDNIMAVAEQLGDVVPRKWKNVQALYLKTNESVALPIYSS 242
[Close]
BLAST of mRNA_H-paniculata_contig8202.16227.1 vs. uniprot
Match: A0A7S1UKI9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKI9_9STRA)

HSP 1 Score: 173 bits (438), Expect = 6.390e-45
Identity = 94/234 (40.17%), Postives = 141/234 (60.26%), Query Frame = 2 
Query:   83 RAVKALLKHVKSSSSDGSGKQSLLEDEGQVVLAQLSLHKIPGHISPKPIRIPIPHSMRK--QEDCEVCLFVKDDAKKGLKEALEKEPVKGLSKIIKLDKLRTQYKEFKARRELISQYDMFVCDDRILPMLTGVLGKTFLSAKKQPVPIKIFSKGCLLSLGAQIARARDSAFLVRSYGDCWCVKLAHTGMTEAEVSANLMAGIEAVVDKIPNKWKNIKAINIKSTDSVALPVYSN 778
            RA  ALL+H+    +   G+ +LL+ E + VL Q +L  +P   S KPIR+ +PH      +    +CL  K ++   +KE     P   + K++ L  LRT+YK ++ RREL++++++FV DDRILPML   LGK F  AKK P+PIKI  KG    +   +A ARDS +L    G C  +++ HTGM    ++ N+ A + A V +IP KW+NI +I++K+  SVALPVY++
Sbjct:   13 RATAALLRHLHEEQAKQRGR-ALLDPEPETVLLQFALKTVPAIASQKPIRLAVPHPFLGFGEGPPRICLICKQESVNAMKELFRAHPDLHVDKVVGLSALRTEYKRYEKRRELMAEFNLFVADDRILPMLAKALGKIFFKAKKHPLPIKINQKGA--KVARDVAAARDSTYLHLVQGPCLALRVGHTGMEADAITENIRAVVPAAVSRIPKKWRNILSIHLKTATSVALPVYAS 243
[Close]
BLAST of mRNA_H-paniculata_contig8202.16227.1 vs. uniprot
Match: A0A5J4XKX2_9CHLO (Ribosomal L1 domain-containing 1-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XKX2_9CHLO)

HSP 1 Score: 171 bits (432), Expect = 1.090e-44
Identity = 92/244 (37.70%), Postives = 157/244 (64.34%), Query Frame = 2 
Query:   62 IEEVQLHRAVKALLKHVKSSSSDGSGKQSLLEDEGQVVLAQLSLHKIPGHI-SPKPIRIPIPHSMRKQEDCEVCLFVKD---DAKKGLKEALEKEPVKGLSKIIKLDKLRTQYKEFKARRELISQYDMFVCDDRILPMLTGVLGKTFLSAKKQPVPIKIFSKGCLLSLGAQIARARDSAFLVRSYGDCWCVKLAHTGMTEAEVSANLMAGIEAVVDKIPNKWKNIKAINIKSTDSVALPVYSNL 781
            +E  Q+ +AV ALLK+V   +S   G + LLEDE + +   ++L K P    +P PI +P+PH +   E+ EVCLFVKD   +  KG K  +++E + G++K+I L KL+ +Y+ F+A+R+L + YD+FV DDR++P L  ++GK+F   KK P+P+ + +K       AQI +A    +L ++ G+C  +++  + M++ + S N++A + + ++ IP KW N++A+++KS +SVALP+Y  L
Sbjct:    9 LEREQVQKAVAALLKYV---ASQKEGSKDLLEDE-EFLYLNIALKKTPQPPKNPSPILLPLPHPIYDAENAEVCLFVKDHKGEGHKGAKLRVKQEKIAGVAKVIGLSKLKGKYEPFEAKRQLCNSYDLFVADDRVVPSLPKLIGKSFFKKKKVPIPVNLEAK----DWSAQIQKALSGTYLNKNGGNCLSIRVGKSSMSQEDCSENIVATVVSALEHIPKKWLNVQALHLKSVNSVALPIYQTL 244
[Close]
BLAST of mRNA_H-paniculata_contig8202.16227.1 vs. uniprot
Match: A0A6G0XX31_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX31_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.860e-44
Identity = 98/240 (40.83%), Postives = 153/240 (63.75%), Query Frame = 2 
Query:   62 IEEVQLHRAVKALLKHVKSSSSDGSGKQSLLEDEGQVVLAQLSLHKIPGHISPKPIRIPIPHSMRKQEDCEVCLFVKDDAKKGLKEALEKEPVKGLSKIIKLDKLRTQYKEFKARRELISQYDMFVCDDRILPMLTGVLGKTFLSAKKQPVPIKIFSKGCLLSLGAQIARARDSAFLVRSYGDCWCVKLAHTGMTEAEVSANLMAGIEAVVDKIPNKWKNIKAINIKSTDSVALPVYSNL 781
            ++  Q+ +AV AL + ++   S  S KQ+L+ED  QV+    + + +P   S KP+ I +P+++R   D EVCLFVKD  K  +K  L+ +P+ GL+K++ + KL+  + +FK +REL + YD+F+ DDRILP L  +LGKTF  AKKQP  + +  K    ++   I R      +  S G C+ VK+AH GM   ++  N++ G + +V+ +P KWKNIK+INIK++DSVALP+Y++L
Sbjct:    5 LDAEQVRKAVVALKQFIQKKKSQNS-KQALVEDN-QVIQIIFTRNTVPAKESLKPVPIALPNNIR--GDGEVCLFVKDSDKDRIKAHLKNDPIPGLTKVMPVKKLKKNFSQFKDKRELKAAYDLFLADDRILPYLKSLLGKTFFDAKKQPTTVNVTGKK---NISDHIRRVLAGTEMFVSPGPCFNVKIAHDGMDTEKIIENIIEGTKNIVEHVPKKWKNIKSINIKTSDSVALPIYNSL 237
[Close]
BLAST of mRNA_H-paniculata_contig8202.16227.1 vs. uniprot
Match: A0A8H7ULE8_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7ULE8_9FUNG)

HSP 1 Score: 167 bits (423), Expect = 2.130e-43
Identity = 96/240 (40.00%), Postives = 151/240 (62.92%), Query Frame = 2 
Query:   62 IEEVQLHRAVKALLKHVKSSSSDGSGKQSLLEDEGQVVLAQLSLHKIPGHISPKPIRIPIPHSMRKQEDCEVCLFVKDDAKKGLKEALEKEPVKGLSKIIKLDKLRTQYKEFKARRELISQYDMFVCDDRILPMLTGVLGKTFLSAKKQPVPIKIFSKGCLLSLGAQIARARDSAFLVRSYGDCWCVKLAHTGMTEAEVSANLMAGIEAVVDKIPNKWKNIKAINIKSTDSVALPVYSNL 781
            +++ Q   AV AL+KHVKS +++      L+EDE  + L  +   KIP      P R+ + +S+  Q D EVCLF KD  K+  KE L  + VK ++K+I + KLR +YK F+A+R+L + Y MF+ DDR++P+L  +LGK F   KKQP+P+ +       +L A+I +A  S ++  + G C  +K+  T ++E  +  N+MA +  V D IP KWKNI++INIK++DS++LP+Y++L
Sbjct:    3 LDDKQTKSAVTALVKHVKSKNAN-----DLIEDESVIWLI-VGTKKIPDTRKAMPKRLNLKYSVL-QSDAEVCLFTKDPQKE-FKELLASKGVKRVNKVIGISKLRDKYKPFEAKRKLCAAYGMFLADDRVIPLLPKLLGKEFFLKKKQPIPVDMKKS----NLKAEIEKALSSTYMHLNGGSCSAIKVGTTALSEQHIFENIMAVVPQVADNIPKKWKNIQSINIKTSDSISLPIYNSL 230
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8202.16227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5C3_ECTSI4.260e-11162.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2CVK6_9STRA6.480e-5245.30Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SVD8_9STRA5.730e-4848.51Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A261XV02_9FUNG4.080e-4741.74Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
W7TFQ3_9STRA6.490e-4742.47Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S0RBE1_9CHLO1.620e-4539.92Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S1UKI9_9STRA6.390e-4540.17Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A5J4XKX2_9CHLO1.090e-4437.70Ribosomal L1 domain-containing 1-like n=1 Tax=Treb... [more]
A0A6G0XX31_9STRA1.860e-4440.83Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8H7ULE8_9FUNG2.130e-4340.00Uncharacterized protein n=1 Tax=Umbelopsis vinacea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8202contigH-paniculata_contig8202:718..5660 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.4
Seed ortholog evalue2.5e-96
Seed eggNOG ortholog2880.D7G5C3
Preferred nameRSL1D1
KEGG koko:K11824,ko:K14775
KEGG Pathwayko04144,ko04721,ko04961,ko05016,map04144,map04721,map04961,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010941,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032879,GO:0032880,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0042981,GO:0043043,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080134,GO:0080135,GO:0090304,GO:0090342,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000772
EggNOG free text desc.regulation of cellular senescence
EggNOG OGsKOG1685@1,KOG1685@2759
Ec32 ortholog descriptionRibosomal protein L1-like
Ec32 orthologEc-14_006980.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko04131,ko04147
Exons2
Model size2209
Cds size1356
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8202.16227.1prot_H-paniculata_contig8202.16227.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8202 1531..5620 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931029.2640228-UTR-H-paniculata_contig8202:717..15301622931029.2640228-UTR-H-paniculata_contig8202:717..1530Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8202 718..1530 -
1691481557.6168528-UTR-H-paniculata_contig8202:717..15301691481557.6168528-UTR-H-paniculata_contig8202:717..1530Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8202 718..1530 -
1622931029.3233087-UTR-H-paniculata_contig8202:5620..56601622931029.3233087-UTR-H-paniculata_contig8202:5620..5660Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8202 5621..5660 -
1691481557.6476204-UTR-H-paniculata_contig8202:5620..56601691481557.6476204-UTR-H-paniculata_contig8202:5620..5660Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8202 5621..5660 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931029.2829902-CDS-H-paniculata_contig8202:1530..25711622931029.2829902-CDS-H-paniculata_contig8202:1530..2571Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8202 1531..2571 -
1691481557.6285434-CDS-H-paniculata_contig8202:1530..25711691481557.6285434-CDS-H-paniculata_contig8202:1530..2571Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8202 1531..2571 -
1622931029.303907-CDS-H-paniculata_contig8202:5305..56201622931029.303907-CDS-H-paniculata_contig8202:5305..5620Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8202 5306..5620 -
1691481557.6379504-CDS-H-paniculata_contig8202:5305..56201691481557.6379504-CDS-H-paniculata_contig8202:5305..5620Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8202 5306..5620 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8202.16227.1

>prot_H-paniculata_contig8202.16227.1 ID=prot_H-paniculata_contig8202.16227.1|Name=mRNA_H-paniculata_contig8202.16227.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=452bp
MPEQQSRIEEVQLHRAVKALLKHVKSSSSDGSGKQSLLEDEGQVVLAQLS
LHKIPGHISPKPIRIPIPHSMRKQEDCEVCLFVKDDAKKGLKEALEKEPV
KGLSKIIKLDKLRTQYKEFKARRELISQYDMFVCDDRILPMLTGVLGKTF
LSAKKQPVPIKIFSKGCLLSLGAQIARARDSAFLVRSYGDCWCVKLAHTG
MTEAEVSANLMAGIEAVVDKIPNKWKNIKAINIKSTDSVALPVYSNLGDL
PPAPAAPQVKVVTDSATAAAGKGEGVEKGDASAKPEADGGQCNKKRKKQP
RPLIRQQLKQIKQDLKDEKEYAGKVGASVGSPPTPAKDAAKQDSRKSKRN
SQKSKQDSRKRYREAADLEKAAPDVETAADALVATGPSAAEGRVAAGTPK
AQKATGGTGEKKKKSPVSSTKAGEKKSGVRGGAGSVGKAKKRRKTVVASS
V*
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mRNA from alignment at H-paniculata_contig8202:718..5660-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8202.16227.1 ID=mRNA_H-paniculata_contig8202.16227.1|Name=mRNA_H-paniculata_contig8202.16227.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4943bp|location=Sequence derived from alignment at H-paniculata_contig8202:718..5660- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCTAACCGACTTCCGCAAAGGTTGAGCTAGGGTATCGCTATGCCGGAGC
AACAGAGCAGAATTGAGGAGGTACAGCTGCACCGCGCCGTTAAGGCTCTT
CTCAAGCACGTGAAAAGCTCTTCCTCTGATGGTAGCGGCAAGCAAAGTCT
GCTGGAGGATGAGGGTCAGGTTGTGTTGGCCCAGCTGTCCTTGCACAAGA
TTCCGGGTCATATTAGCCCTAAGCCCATTCGCATCCCGATACCACACTCT
ATGAGAAAACAAGAGGACTGCGAGGTGTGCCTGTTTGTGAAGGACGATGC
GAAGAAGGGCCTGAAGGAGGCGCTTGAGAAAGAGCCGGTCAAGGGCCTCT
CCAAGGTCAGCAGCCACTGCGTTGTCACTCTGTAGTTCATGATACTGACC
TGACGTGTACTGCACTGTCTGGATATGCTGCACTGTACATTCTGTACTGC
TTAACTAACTTATTGTGTGGTACCGCCTGCTCTCTGTGGAAGTGAATCAC
AGACAGACGGAGCGACAGTTCACTACGATACATCTATTGATTGATAAAAA
TAGGAGTACTGGTAGTAGGTTCCGCTCTGGTAATGCGTATAGTTAGGGTC
CCCTCGAGTGTCTTCGCAGAGAAAACGACGGCGCACTCAGTACGGGTCAG
GGGTGCGGTTAGCCGGGCGATTGCTCTTGTAACTTCAGTATCATGAAACC
TACCCGTACAATCGAACCCTAACCCAACTGAAAATCATTGGTGTTCACTG
ACTATGAAGGTAAATGTGCCGTTTAAGATACACGTAAGGCGTTTCACGCG
CAAATTGATGGTTTGTCATAAAGGCGAGATTAGGAGATTTCATGAGATAT
TGACGGATAAATATTTTAATCAGTTACCATGCAAACTTCGAAAAACGCAA
AAAGGGCTGGAAATTCATGGCAGGAGAGCCAGTGAACTACGACACTTGTG
GCATGAGACCAAACACCCAGATGGCCCTAGACAAATTAAGATACATGTTA
CAAAACAGTCAATTGCACACAATTTGGGACAGGCCAGATCTGGTAATTTG
GCACTAACGTTTCTGGAAGGATGACAGGCACAACCATGAAATGAACAAAA
AAAAAAAACGTCCGAGGATGCAATTCATGTATTCCTCTATTTTCGGAACA
AAAATCGGTGTACCGCGGCTGCATTTAACCTCATCATACTCCACCAAAAC
ACGTTGTTTTGTCGAAAAAAAAGAACAAAAGAGTTCTGTACATGCTATTG
GGAGACGGCATAAAATTGGAGATGGATCGGAGTCAGTTACGATGGCACTC
GAGTCCGTCTTCTCTAAGAAAAATGACGGTTTTTCGTAGTTTCCGCCTTG
CCATCAAAACAACTGCATTAGGTTCTGCAGCCGACATCTCTAGTGAACGG
CGGCGGTGCTTAACTGTGCTGTGCTCTACCAGAAAATCCTTTTATGGAAT
TTTTTGGGGTGTGTTTAGGCCACTTCTTGTGATACTTGGATAATTGAGAA
ACAAAACTAATTGATATTTTCAATTATCCGACTGAAAAATATCCAATTCA
AAATTCGAACCACTTCTTATGGGAAACTATGGTTTTTGAAGGTGTTCCAA
ACTTGGGCAGGCTGTAGCTGATGCGAGGAGAAATGAGTAAAGTTATACCC
TTAGTTTTGAAAAGCGCGTGGAAAACGCCGACCGCGTAGGGAGATCGAAG
CCTTGACTGTCGTCGTGCATGAGTTGACATATGCGTTCTGTCGGTCGATT
CGTGTACGATCGAACGGGTTGTAGGGTTTTGAGACCTGGAAAATTCCTGG
AGGGGAGAGGGATGAGCTCCCCCTAGAGTTCGTTCAATTCGTGGATAATA
ATCAAGTATTCCGGCAGCTTGAAAATGCTGAACTCACGTTCGTTTTGTTT
CACGGTTATTATAATGTTTTCTACAGGACTTTATAGACGCTAATTTGCGT
GTATCTACTTGTACTTTCGACTCGGTCTTGACTCTCTGGTATCTTTTCCA
AACCGTACCACCATATTGCAGAGGCCGTACTACTGGTGAAGATGTCCTTG
GTAGTTAGTGCTATGTGTTATTTGGTGGTGAAGTTCTTGCTCCTGTGTGG
AACGTACTACTAGTTGTCTCATAGATGCTGCATGTTGTTGTTGCTACCAC
GTATCATGTGTGTATGTAGATTTTTTATCACGCTCGAATATCTTCGCGGG
ACCAAGATCAATCCATTCCATTTGTGATCTTGCACGTAGTTGTGCTAGAA
GCAATGGGTCTTCTTCCCCCCCCCTTGCGCGGGGGACATGACTATATTAT
CCTCTATTTATCTAACACTGTACATGTTTTCATGTCGGAGAACGACTCCA
TTGCAACCTTTACGGCGGATTCCAAAGACGAATTCTCAGCGTGAAAATAC
ACTATATCCAACGGGCGTGAATTTTATTTAGCCCATTCTCACCCCCCCAG
TGAACTTTTGAACGTTCCCACCTCGTAATTCCCATCACGAAGCTTGCATA
TTTTTCTCACGTCCCCTATTTTGTTAAATGTTTTCGTGACCGGATACTGT
TGTACTACGGTAGCATTTATCGGAAGATCATATATGTGCTGCTGTGGCAC
CAGTGTGACTTTTCGTCCCGTTGTTTTCGGGGGTTGTGTTGAACATGCGC
TATATAGTCGTTACGGCCCGCTAGACTCTAGTAAAAACTTCCTATTTCAG
ACGAGGGTCGAACGTTGAATGTTTTTTCAAAGAGAACCAATACTAAGAGC
AATAAATATATAGGTATCACTACGGGGTCACAAATTGAGCTAAAATAATA
CCGAGAAATGAGCCTGGAATTCTTATTTATCATGTCTTGGCGATGGACCG
AAAATGCAAACATTCGATTTACAAGTATCTTCAGTGCTGCTAGTTGTGTT
GTCACGCAATTCGCGAGCAGCGCTCACATGGCAACATACACGCACTCTAA
CAACACAACGCCAGGCTAATTTGGAGGAGCGAGAAACGGGCGTGAGATGC
ATGCTACACATCGTGCTCAACCCTGATGACGCTGTCGTGATTTTCATCAC
TTGTGTGGTTTTTACGTCTGTGTTTGTGTAATCGAGCAGATTATCAAGCT
GGATAAGCTACGCACTCAATACAAGGAATTCAAAGCTCGCCGGGAACTTA
TTTCGCAGTACGACATGTTCGTCTGCGACGATCGCATCCTTCCGATGCTC
ACTGGAGTACTCGGAAAGACTTTCTTGAGCGCAAAGAAGCAGCCAGTGCC
GATAAAAATATTCAGCAAGGGATGTCTGCTGTCGCTTGGTGCGCAGATCG
CGCGAGCGAGAGACAGCGCATTCTTGGTGCGCTCCTACGGTGACTGTTGG
TGCGTGAAACTGGCGCATACCGGCATGACGGAGGCAGAGGTGTCGGCTAA
CCTGATGGCCGGAATCGAAGCGGTCGTGGACAAAATTCCAAACAAATGGA
AGAACATCAAGGCAATCAACATCAAATCTACCGACTCGGTGGCATTGCCC
GTGTACAGCAACCTTGGTGATTTGCCTCCGGCGCCTGCGGCGCCTCAAGT
GAAGGTGGTTACGGACAGTGCTACGGCTGCTGCGGGGAAGGGGGAGGGCG
TAGAGAAAGGTGACGCGTCGGCGAAGCCGGAGGCCGATGGGGGGCAGTGC
AACAAGAAGCGCAAAAAGCAACCCCGACCGCTCATCCGACAACAGCTGAA
GCAGATCAAGCAAGACTTGAAAGACGAAAAAGAATATGCAGGCAAGGTTG
GGGCCAGTGTTGGGTCTCCTCCGACGCCAGCGAAGGATGCCGCGAAGCAG
GATTCGCGGAAGAGCAAGCGGAATTCGCAGAAGAGCAAGCAAGATTCGCG
GAAGAGATATCGCGAAGCAGCAGATCTCGAGAAAGCCGCGCCGGATGTAG
AGACTGCCGCAGATGCGCTAGTGGCAACGGGGCCGAGCGCAGCTGAAGGT
CGGGTTGCTGCGGGTACTCCCAAGGCACAAAAGGCGACGGGTGGCACGGG
GGAAAAGAAGAAAAAATCTCCCGTTTCGTCGACGAAAGCGGGAGAAAAGA
AGAGTGGTGTGCGCGGGGGAGCGGGAAGCGTTGGGAAGGCGAAGAAACGG
CGAAAGACTGTGGTCGCGTCAAGTGTTTAGCGCGCCAACGTACTTACGTG
TATTTGATTGTTGATTAAGGTGGCTGGCCTTTTTCCCTCCTTTCCGTTCT
CTGGAGGTTGCTTGATGAGGATATATGTGTAGTCCTGCGCGTGGGATTGA
CAGACTCACCATGAATGTACCGGGCAATCGTCGTATTTGTCGACTGCTGT
ACTGCACTGCCCCCCGCCCTCTTCCTCCCCCCACTGCCCTAAATCCAGGT
TGTTATTAGCAAGCGATTACTGTCGTTGCGTTTCTGCTTGCTTATTCCAA
GCGCGTTTTTCGCGATTTCCGACTCTAATTGACTTGTTCGGTCGTTTAGA
CGAAGGAGGTGATTGTCCGCTAGAGACACATTAGGTTTGCAAGGATATGG
CGATTGATGCGTTGTGTTAGATTATTTATGCCGAGCTTGTATGAGTCATG
TATTGTTGTGTAAATGGTGGGACGTGGGCAGAGGTGCAGCTCGTTGGCTT
GGGGCTGTAGGGGTTGCCGGGTTTTTTTTTCCTCGCGTGAAAGAGATGAG
CGCCAAAAATCTTTTCCCCCTTCAATGTCCTCTCTGGCTGTAATTTGTGA
GCTCGTGAGACTTCAATATACGGCCATGCAATGGATATCAAGGGCTCAAT
GCGGAGGGCATGCAAGTAACTCGGCAATCGGACTGTAACAACTCTTGTTG
CTTGGGCCGGTATTGCCCTGCACCTCCTCTACTGCCCGCATAGTGAGATT
AGGATAACTCAACAAGGCAACATTGCGGTTTTTCTTTCCTTCGAAATACT
CTGTGAAATGGACTCACGATGCCATCGCGTCGTTCTTGCTTGC
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Coding sequence (CDS) from alignment at H-paniculata_contig8202:718..5660-

>mRNA_H-paniculata_contig8202.16227.1 ID=mRNA_H-paniculata_contig8202.16227.1|Name=mRNA_H-paniculata_contig8202.16227.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2712bp|location=Sequence derived from alignment at H-paniculata_contig8202:718..5660- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGGAGCAACAGAGCAGAATTGAGGAGGTACAGCTGCACCGCGCCGT
TAAGGCTCTTCTCAAGCACGTGAAAAGCTCTTCCTCTGATGGTAGCGGCA
AGCAAAGTCTGCTGGAGGATGAGGGTCAGGTTGTGTTGGCCCAGCTGTCC
TTGCACAAGATTCCGGGTCATATTAGCCCTAAGCCCATTCGCATCCCGAT
ACCACACTCTATGAGAAAACAAGAGGACTGCGAGGTGTGCCTGTTTGTGA
AGGACGATGCGAAGAAGGGCCTGAAGGAGGCGCTTGAGAAAGAGCCGGTC
AAGGGCCTCTCCAAGATGCCGGAGCAACAGAGCAGAATTGAGGAGGTACA
GCTGCACCGCGCCGTTAAGGCTCTTCTCAAGCACGTGAAAAGCTCTTCCT
CTGATGGTAGCGGCAAGCAAAGTCTGCTGGAGGATGAGGGTCAGGTTGTG
TTGGCCCAGCTGTCCTTGCACAAGATTCCGGGTCATATTAGCCCTAAGCC
CATTCGCATCCCGATACCACACTCTATGAGAAAACAAGAGGACTGCGAGG
TGTGCCTGTTTGTGAAGGACGATGCGAAGAAGGGCCTGAAGGAGGCGCTT
GAGAAAGAGCCGGTCAAGGGCCTCTCCAAGATTATCAAGCTGGATAAGCT
ACGCACTCAATACAAGGAATTCAAAGCTCGCCGGGAACTTATTTCGCAGT
ACGACATGTTCGTCTGCGACGATCGCATCCTTCCGATGCTCACTGGAGTA
CTCGGAAAGACTTTCTTGAGCGCAAAGAAGCAGCCAGTGCCGATAAAAAT
ATTCAGCAAGGGATGTCTGCTGTCGCTTGGTGCGCAGATCGCGCGAGCGA
GAGACAGCGCATTCTTGGTGCGCTCCTACGGTGACTGTTGGTGCGTGAAA
CTGGCGCATACCGGCATGACGGAGGCAGAGGTGTCGGCTAACCTGATGGC
CGGAATCGAAGCGGTCGTGGACAAAATTCCAAACAAATGGAAGAACATCA
AGGCAATCAACATCAAATCTACCGACTCGGTGGCATTGCCCGTGTACAGC
AACCTTGGTGATTTGCCTCCGGCGCCTGCGGCGCCTCAAGTGAAGGTGGT
TACGGACAGTGCTACGGCTGCTGCGGGGAAGGGGGAGGGCGTAGAGAAAG
GTGACGCGTCGGCGAAGCCGGAGGCCGATGGGGGGCAGTGCAACAAGAAG
CGCAAAAAGCAACCCCGACCGCTCATCCGACAACAGCTGAAGCAGATCAA
GCAAGACTTGAAAGACGAAAAAGAATATGCAGGCAAGGTTGGGGCCAGTG
TTGGGTCTCCTCCGACGCCAGCGAAGGATGCCGCGAAGCAGGATTCGCGG
AAGAGCAAGCGGAATTCGCAGAAGAGCAAGCAAGATTCGCGGAAGAGATA
TCGCGAAGCAGCAGATCTCGAGAAAGCCGCGCCGGATGTAGAGACTGCCG
CAGATGCGCTAGTGGCAACGGGGCCGAGCGCAGCTGAAGGTCGGGTTGCT
GCGGGTACTCCCAAGGCACAAAAGGCGACGGGTGGCACGGGGGAAAAGAA
GAAAAAATCTCCCGTTTCGTCGACGAAAGCGGGAGAAAAGAAGAGTGGTG
TGCGCGGGGGAGCGGGAAGCGTTGGGAAGGCGAAGAAACGGCGAAAGACT
GTGGTCGCGTCAAGTGTTTAGATTATCAAGCTGGATAAGCTACGCACTCA
ATACAAGGAATTCAAAGCTCGCCGGGAACTTATTTCGCAGTACGACATGT
TCGTCTGCGACGATCGCATCCTTCCGATGCTCACTGGAGTACTCGGAAAG
ACTTTCTTGAGCGCAAAGAAGCAGCCAGTGCCGATAAAAATATTCAGCAA
GGGATGTCTGCTGTCGCTTGGTGCGCAGATCGCGCGAGCGAGAGACAGCG
CATTCTTGGTGCGCTCCTACGGTGACTGTTGGTGCGTGAAACTGGCGCAT
ACCGGCATGACGGAGGCAGAGGTGTCGGCTAACCTGATGGCCGGAATCGA
AGCGGTCGTGGACAAAATTCCAAACAAATGGAAGAACATCAAGGCAATCA
ACATCAAATCTACCGACTCGGTGGCATTGCCCGTGTACAGCAACCTTGGT
GATTTGCCTCCGGCGCCTGCGGCGCCTCAAGTGAAGGTGGTTACGGACAG
TGCTACGGCTGCTGCGGGGAAGGGGGAGGGCGTAGAGAAAGGTGACGCGT
CGGCGAAGCCGGAGGCCGATGGGGGGCAGTGCAACAAGAAGCGCAAAAAG
CAACCCCGACCGCTCATCCGACAACAGCTGAAGCAGATCAAGCAAGACTT
GAAAGACGAAAAAGAATATGCAGGCAAGGTTGGGGCCAGTGTTGGGTCTC
CTCCGACGCCAGCGAAGGATGCCGCGAAGCAGGATTCGCGGAAGAGCAAG
CGGAATTCGCAGAAGAGCAAGCAAGATTCGCGGAAGAGATATCGCGAAGC
AGCAGATCTCGAGAAAGCCGCGCCGGATGTAGAGACTGCCGCAGATGCGC
TAGTGGCAACGGGGCCGAGCGCAGCTGAAGGTCGGGTTGCTGCGGGTACT
CCCAAGGCACAAAAGGCGACGGGTGGCACGGGGGAAAAGAAGAAAAAATC
TCCCGTTTCGTCGACGAAAGCGGGAGAAAAGAAGAGTGGTGTGCGCGGGG
GAGCGGGAAGCGTTGGGAAGGCGAAGAAACGGCGAAAGACTGTGGTCGCG
TCAAGTGTTTAG
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