mRNA_H-paniculata_contig8188.16207.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8188.16207.1
Unique NamemRNA_H-paniculata_contig8188.16207.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: D7FNG2_ECTSI (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG2_ECTSI)

HSP 1 Score: 391 bits (1004), Expect = 8.420e-132
Identity = 191/306 (62.42%), Postives = 228/306 (74.51%), Query Frame = 1
Query:    1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFW-EEDKLEQDQAE------------------------------------CTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAPGLRSWDFQTQEAS 807
            +DECTPFHV+++YT++SMHRTHRWA+RSLREFID DDG+QALYGI+QGG++PDLR EAV FVN  PFFGIAVGGSLGADK TMH VV  TM ++RRDRPVHLLGIGGI+DIFHGVRQG+DTFDCV PTRLGRHG ALVKA FW  E +LE+++A                                       +G + KKR P    PREHV + KG+YR D+R ID+DCGCPTC+ GY+RAY+ HL +AGELLGG+LVSQHNV+FMNELMT+IR A+ EG L EEE KW+APGLR+ DF  + A+
Sbjct:  174 LDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSHTMANVRRDRPVHLLGIGGIADIFHGVRQGVDTFDCVHPTRLGRHGGALVKASFWTREQELEEERANQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDVRKKRHPV--VPREHVNLLKGRYREDHRVIDEDCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGRLAEEEDKWLAPGLRARDFHKRAAA 477          
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: Q5ENP0_HETTR (Chloroplast queuine tRNA ribosyl transferase (Fragment) n=1 Tax=Heterocapsa triquetra TaxID=66468 RepID=Q5ENP0_HETTR)

HSP 1 Score: 319 bits (817), Expect = 6.520e-107
Identity = 152/256 (59.38%), Postives = 186/256 (72.66%), Query Frame = 1
Query:    1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAP 768
            +DECTPFHV++ YT  +M R+HRWA+RSL EF  HDDG+QALYGI+QGG+  DLR E+VAFVN  PFFG A+GGSLGAD+ TMHAVV  T    R DRP+HLLGIGGI DIFHGVR GIDTFDCV PTRLGRHG ALV+A++W+E++                  P+ +  REH+ + K ++R D RPID  CGC TC++ +SR YL HL++A E LGG L S HNVYF+N +M AIR A+R GTL +EE  WV P
Sbjct:   20 LDECTPFHVDKAYTARAMRRSHRWAVRSLTEFAAHDDGTQALYGIIQGGVHEDLRAESVAFVNRQPFFGTAIGGSLGADRATMHAVVGYTAARCRPDRPIHLLGIGGIRDIFHGVRCGIDTFDCVHPTRLGRHGGALVQARYWDEEQ------------------PESRVTREHIHLEKARFRDDIRPIDSTCGCYTCRN-FSRGYLHHLLRAQETLGGTLASLHNVYFVNRMMAAIRVAIRNGTLAQEEAVWVHP 256          
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A7R9UGF4_9STRA (tRNA-guanosine(34) queuine transglycosylase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGF4_9STRA)

HSP 1 Score: 319 bits (817), Expect = 2.180e-105
Identity = 150/260 (57.69%), Postives = 192/260 (73.85%), Query Frame = 1
Query:    1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAPGLRS 780
            +DECTPFHV ++YTE SMHR+HRWALRSL EFI  DDGSQALYGI+QGG++ DLR++A +FVN+ PFFG A+GGSLG  K TM+ +V ET + +RRDRP+HLLGIG + DIF GVR GIDTFDCV PTR+ RHG ALVKA  WEE+           G++    LP     REH  + + +YR D+RPID  C C TC++ +SR Y++HL+KA E L G L++ HN+++MN+LM A+R A+R+GTLDEEEK W+ P   S
Sbjct:  117 LDECTPFHVTKDYTEQSMHRSHRWALRSLEEFIRGDDGSQALYGIIQGGVYKDLRRQAASFVNDWPFFGHAIGGSLGDSKTTMYDIVSETASLLRRDRPIHLLGIGSVKDIFAGVRMGIDTFDCVHPTRIARHGGALVKAHHWEEE-----------GALSHDSLP-----REHTNLMRARYRDDDRPIDSSCECYTCQN-FSRGYIRHLLKADESLAGTLLTVHNIHYMNKLMAAVREAIRKGTLDEEEKLWLHPRTSS 359          
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A0G4EBX0_VITBC (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EBX0_VITBC)

HSP 1 Score: 317 bits (812), Expect = 1.170e-103
Identity = 159/259 (61.39%), Postives = 186/259 (71.81%), Query Frame = 1
Query:    1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHD-DGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAPGL 774
            +DECTPF+VE+ YTE+SM R+HRW LRSL+EF   D    QALYGIVQGG  P LR E+  FVN  PFFG A+GGSLGAD+ TMH+VV  T  S+RRDRP+HLLGIGG+ DIFHGVR GIDTFDCV PTRLGRHG ALV+  FW+ D           GS G  R     K +EH+ + K  ++ D+RPID  CGC TC++ +SRAYL HL+KAGE LGG LVS HNV+FMN LM  IR A+R GTLDEE  KWV P L
Sbjct:  187 LDECTPFNVEKSYTESSMRRSHRWGLRSLQEFSRLDCQQRQALYGIVQGGTCPSLRDESTHFVNTTPFFGSAIGGSLGADRATMHSVVALTAKSLRRDRPIHLLGIGGVRDIFHGVRHGIDTFDCVHPTRLGRHGGALVRRDFWDTD-----------GSGGGSRSD---KVKEHINLKKSPFKRDSRPIDASCGCYTCRN-FSRAYLHHLLKAGEQLGGTLVSLHNVFFMNRLMRDIRSAIRSGTLDEERSKWVHPAL 430          
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A0G4I7T1_9ALVE (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I7T1_9ALVE)

HSP 1 Score: 318 bits (814), Expect = 1.260e-102
Identity = 152/265 (57.36%), Postives = 187/265 (70.57%), Query Frame = 1
Query:    1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDG-------SQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAPGL 774
            +DECTPF V +EYTE +M R+HRWA RSL EF++  +        +QALYGIVQGG++P LRKE+  F N HPFFG+A+GGSLGADK  M   V  T   +RRDRP+HLLG+GG+ DIFHGV  GIDTFDCV PTRLGRHG ALVK KFWEE      + + +   +G           EH  + KG ++ D+RPID +CGC TC++ YSRAYL H  K+GEL+GG LV+QHNVYFMNELM +IR A+RE  L+EE+ KWV P L
Sbjct:  271 LDECTPFRVTKEYTEGAMKRSHRWAFRSLSEFVNGQEERRRSGRPTQALYGIVQGGVYPSLRKESCEFNNEHPFFGVAIGGSLGADKRMMRKTVAVTCRMLRRDRPIHLLGVGGVRDIFHGVANGIDTFDCVHPTRLGRHGGALVKRKFWEEGLPPTSKGKDSVMKVG-----------EHFNVAKGLFKHDDRPIDSECGCATCRN-YSRAYLHHCFKSGELVGGSLVAQHNVYFMNELMASIRAAIRENRLEEEKAKWVHPDL 523          
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A7S4GH72_9EUGL (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GH72_9EUGL)

HSP 1 Score: 320 bits (819), Expect = 1.790e-102
Identity = 153/254 (60.24%), Postives = 184/254 (72.44%), Query Frame = 1
Query:    1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWV 762
            +DECTPF+V++EYT  S  R+HRWA+RSL EF+  DDG+QALYGI+QGG +PDLR E++ F N  PFFG A+GGSLGADKG MH VV  T    R DRP+HLLGIGG++DIFHGVR GIDTFDCV PTRLGRHG ALV A +WE++                   P  +  REHV I K ++R D RPID+ CGC TC++ +SR YL HL KA E LGG LV+ HNVY+MN LM AIR A+R GTLDEE++KWV
Sbjct:  370 LDECTPFNVDKEYTAQSTRRSHRWAIRSLDEFVRGDDGTQALYGIIQGGTYPDLRMESIEFTNRQPFFGTAIGGSLGADKGMMHDVVATTAKHCRTDRPIHLLGIGGVTDIFHGVRYGIDTFDCVHPTRLGRHGGALVMAHYWEQED------------------PDARHFREHVHIPKARFRLDTRPIDETCGCYTCRN-FSRGYLHHLFKAKEALGGTLVAIHNVYYMNRLMGAIREAIRNGTLDEEQRKWV 604          
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A7S1IB19_9EUGL (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IB19_9EUGL)

HSP 1 Score: 305 bits (781), Expect = 6.640e-96
Identity = 145/258 (56.20%), Postives = 188/258 (72.87%), Query Frame = 1
Query:    1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAPGL 774
            +DECTPF+V++EYT AS  R+HRWA+RSL EFI  DDG+QALYGI+QGG++ DLR+E++ F N+ PFFG A+GGSLGA K  MH +V  T    R+DRP+HLLGIGG+ DIF+GVR GIDTFDCV PTRL RHG ALVKAK+W+E+           G  G ++       +E + +    +R D RPIDK CGC TC++ ++R YL HL+KAGE L G L++ HNVY+MN LM++IR A+++GTLDEEE  WV P +
Sbjct:  435 LDECTPFNVDKEYTAASTRRSHRWAVRSLDEFIRTDDGTQALYGIIQGGVYDDLRRESIDFTNSQPFFGTAIGGSLGATKSMMHDIVTYTALRCRQDRPIHLLGIGGVRDIFNGVRAGIDTFDCVHPTRLARHGGALVKAKYWDEE---------APGMEGARK-------KECISLKNASFRRDTRPIDKTCGCYTCQN-FTRGYLHHLIKAGESLVGTLLTVHNVYYMNSLMSSIRLAIQKGTLDEEETVWVHPDI 675          
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A836CCU6_9STRA (tRNA-guanine(15) transglycosylase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCU6_9STRA)

HSP 1 Score: 297 bits (760), Expect = 3.200e-94
Identity = 154/300 (51.33%), Postives = 194/300 (64.67%), Query Frame = 1
Query:    1 IDECTPFHVEREYTEASMHRTHRWALRSLREFI-DHDDGSQ--ALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLE---QDQAECTTGS-------------------------IGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGT-LDEEEKKWVAPGLRSWDFQTQEA 804
            +DECTPFHV++EYT AS  R+HRWALRSL EF+   ++G+Q  ALYGI+QGG++ DLR E+ AFVN  PFFGIAVGGSLGA    M+ VV  TM  +RRDRPVHLLGIGG++DIF+GV  GI TFDCV PTRLGRHG ALV+ + W +       Q      T                              +   + Q PR  +++ KGQ+R D RP+D +CGCPTC  GYSRAYL H ++AGEL+GG L++QHNV+ MN LM  +R A+  GT L++ E  W+APGLRS D    +A
Sbjct:  204 LDECTPFHVDKEYTAASTRRSHRWALRSLNEFVRTANEGAQQQALYGIIQGGVYRDLRAESAAFVNAQPFFGIAVGGSLGASAADMYRVVDMTMAMVRRDRPVHLLGIGGVADIFNGVSHGIGTFDCVHPTRLGRHGGALVRVRHWPKSACSLAVQSSPPVHTNPRXXXXXXXXXXXXXXXXXXXXXXXXXXSRGGGEGQVPRASIQLAKGQFRGDARPVDAECGCPTCAAGYSRAYLHHCVRAGELVGGALLTQHNVWTMNALMADVRAAIAAGTPLEQVEDHWLAPGLRSADIVAADA 503          
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A7S3UNN8_HETAK (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNN8_HETAK)

HSP 1 Score: 295 bits (755), Expect = 4.140e-94
Identity = 140/258 (54.26%), Postives = 181/258 (70.16%), Query Frame = 1
Query:    1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAPGL 774
            +DECT +H+ ++ T  SM  +HRWALRSL EFI  DDGSQALYGI+QGG++ DLR E+  F+N+ PFFG A+GGSLG    TMH +VK T   +R DRP+HLLGIGGI D+F+GV +GIDTFDCV PTRLGRHG ALV A +W  D   +   +    + G    P      EHV + +  ++ D RP+D DC CPTC++ YSRAYL H +KAGE LGGLL+SQHNV+FMN++M  IR ++ +G LDE ++ +V   L
Sbjct:  235 LDECTAYHIGKDGTAESMRMSHRWALRSLAEFIRGDDGSQALYGIIQGGVYDDLRVESAEFINSQPFFGTAIGGSLGDSSRTMHDIVKFTAGLVREDRPIHLLGIGGIKDVFNGVSEGIDTFDCVHPTRLGRHGGALVAAAWWRADHAPRPTPQQIIKNNG---FP------EHVNVVRAHFKEDPRPLDPDCSCPTCQN-YSRAYLNHCLKAGESLGGLLISQHNVHFMNKMMERIRESIPQGKLDEVKESYVGKAL 482          
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A1W6N307_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Candidatus Nucleicultrix amoebiphila FS5 TaxID=1414854 RepID=A0A1W6N307_9PROT)

HSP 1 Score: 288 bits (736), Expect = 1.410e-92
Identity = 148/254 (58.27%), Postives = 175/254 (68.90%), Query Frame = 1
Query:    1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWV 762
            +DECTPFHV++ YTE SMH THRW LRSL EF   + G QA+YGIVQGG++PDLRK A AFVN+HPFFGIAVGGSLGA K  M  VV   M  I   RPVHLLGIGGISDIF+GVR+GIDTFDCV PTRL RHG ALV+  FW    L+ D      GS G           EH+ +   +++ D+ PID+ C C TCK  +SRAYL HL+KA ELL    ++ HNV FMN LM AIR A+ E  L+EE+K W+
Sbjct:  169 LDECTPFHVDKSYTEKSMHLTHRWGLRSLEEFKRTNSGQQAIYGIVQGGVYPDLRKIAAAFVNSHPFFGIAVGGSLGATKEQMAEVVNSVMNEISPQRPVHLLGIGGISDIFNGVREGIDTFDCVHPTRLARHGGALVRPDFW----LKND------GSGG-----------EHISLKGSRFKDDDLPIDESCPCSTCKT-FSRAYLHHLIKAQELLVYQALTIHNVTFMNRLMRAIRTAIIENRLEEEQKNWM 400          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNG2_ECTSI8.420e-13262.42Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
Q5ENP0_HETTR6.520e-10759.38Chloroplast queuine tRNA ribosyl transferase (Frag... [more]
A0A7R9UGF4_9STRA2.180e-10557.69tRNA-guanosine(34) queuine transglycosylase n=1 Ta... [more]
A0A0G4EBX0_VITBC1.170e-10361.39Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A0G4I7T1_9ALVE1.260e-10257.36Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A7S4GH72_9EUGL1.790e-10260.24Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A7S1IB19_9EUGL6.640e-9656.20Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A836CCU6_9STRA3.200e-9451.33tRNA-guanine(15) transglycosylase-like protein n=1... [more]
A0A7S3UNN8_HETAK4.140e-9454.26Queuine tRNA-ribosyltransferase catalytic subunit ... [more]
A0A1W6N307_9PROT1.410e-9258.27Queuine tRNA-ribosyltransferase n=1 Tax=Candidatus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8188contigH-paniculata_contig8188:181..5394 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score392.5
Seed ortholog evalue1.6e-106
Seed eggNOG ortholog2880.D7FNG2
KEGG rclassRC00063
KEGG koko:K00773
KEGG ReactionR03789,R10209
Hectar predicted targeting categoryother localisation
EggNOG free text desc.tRNA-guanine transglycosylation
EggNOG OGsCOG0343@1,KOG3908@2759
EC2.4.2.29
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons5
Model size811
Cds size810
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8188.16207.1prot_H-paniculata_contig8188.16207.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8188 181..5393 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931025.734831-CDS-H-paniculata_contig8188:180..3031622931025.734831-CDS-H-paniculata_contig8188:180..303Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8188 181..303 +
1691481555.9812331-CDS-H-paniculata_contig8188:180..3031691481555.9812331-CDS-H-paniculata_contig8188:180..303Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8188 181..303 +
1622931025.750002-CDS-H-paniculata_contig8188:720..8371622931025.750002-CDS-H-paniculata_contig8188:720..837Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8188 721..837 +
1691481555.9910123-CDS-H-paniculata_contig8188:720..8371691481555.9910123-CDS-H-paniculata_contig8188:720..837Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8188 721..837 +
1622931025.7866719-CDS-H-paniculata_contig8188:1650..17521622931025.7866719-CDS-H-paniculata_contig8188:1650..1752Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8188 1651..1752 +
1691481555.9986567-CDS-H-paniculata_contig8188:1650..17521691481555.9986567-CDS-H-paniculata_contig8188:1650..1752Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8188 1651..1752 +
1622931025.8484027-CDS-H-paniculata_contig8188:2571..28311622931025.8484027-CDS-H-paniculata_contig8188:2571..2831Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8188 2572..2831 +
1691481556.006623-CDS-H-paniculata_contig8188:2571..28311691481556.006623-CDS-H-paniculata_contig8188:2571..2831Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8188 2572..2831 +
1622931025.866333-CDS-H-paniculata_contig8188:5185..53931622931025.866333-CDS-H-paniculata_contig8188:5185..5393Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8188 5186..5393 +
1691481556.0144198-CDS-H-paniculata_contig8188:5185..53931691481556.0144198-CDS-H-paniculata_contig8188:5185..5393Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8188 5186..5393 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8188.16207.1

>prot_H-paniculata_contig8188.16207.1 ID=prot_H-paniculata_contig8188.16207.1|Name=mRNA_H-paniculata_contig8188.16207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=270bp
IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGI
FPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPV
HLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQ
DQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKD
GYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEE
KKWVAPGLRSWDFQTQEASA
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mRNA from alignment at H-paniculata_contig8188:181..5394+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8188.16207.1 ID=mRNA_H-paniculata_contig8188.16207.1|Name=mRNA_H-paniculata_contig8188.16207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5214bp|location=Sequence derived from alignment at H-paniculata_contig8188:181..5394+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATAGACGAGTGTACGCCATTTCACGTAGAGCGGGAGTACACGGAGGCGTC CATGCACAGAACGCACCGCTGGGCTTTGCGCAGCCTCCGAGAGTTTATCG ACCATGACGACGGCTCGCAAGCGGTGAGACAGACCACTAAGTGCGTCGTG TGTGTGTCTGCTATGTGGGGGATTTCGTCAACGGAATTCGGAAATTGCAG GGAGAGAGAGAGAGAGAAAAAAAAAAAGAGAGAAAGAGAGAAAGAGAGAA AGAGAGCACTTGACCGCGAAACATTCGAATTTCTTTTCGACAACGTTTTG CTGCTCTGGATACTGTTGGAGCCCGCCCGGCCCGCGCGCATTTAGCGTGT TGAGTTACTATTTATTAAGTCGGTTAGTCATCGCTGGTATTTAGCTCAAG TATCCGAATGAAATTTTTTCCCGCCTGTTGACTGTCTTGTTATCGTGTTT CCTACGCCTCCACGCTCGCAGTGTGTTTTCCCCCCCCGCTGCCCAAATTC CATGCGCCGACGACTACGTGTACGTTTCTATCTGTGTCAGCTGTATGGTA TTGTGCAGGGAGGGATTTTCCCCGACTTGCGAAAAGAGGCGGTGGCTTTT GTCAACAATCACCCCTTCTTTGGGATAGCTGTTGGGGGAAGTCTTGGGGC AGACAAGGTAGGTGCAGAGGCGCGCGAGTGGGGGAGGTGCAGGTACGCGG GGGGGGGGGGAGGGCATTGCCAAAACGGTAGCGGAGAAAGATGATACAAT TTTACTTGTTGCCGTTCACGCGGGGCTGGCGTTATATCAACTCTATTTTC TCTCTTCCTTTTTTTCCCTTCTTTGCTACTCTGGTATTAATATCCATCCA CACTTGCTTTCATATTTTTATAGGTGGCGCAGTGCTAGCTGTCCTGGCAA ATGATCCGCTCGTTTTTGTACTCGGCTTTTTTTACTCAAACTCCCAGCGC GCCGGCGCCATTTACTTGAGACCTTTACGGCGGGAGCCATTGTTCAGAGC TCTCGCTCTGTCTCTCTTTCTCTTTCTCTATCTCTATGTATACATGAATA AAGCATATCAAGCTTTCAACCATGGCGCGCCAGCGGTTAAGGAACTTTGT ACCGCTGCTACCCCCACCCTTGCCCGGCCCCCGTTGGCGATCTGTGCCGC TTTGACTTCACATCGCGCGGTACCGACATTGACCAACAACAAGCCCGCTC GAAGATTACCGATGTTCATCTCCCCGACCGCACCTCCTTAGTCTAAGCCT GAGGTACGGCTAACGCGAGCCACGCACGATTACCTACCCCGTCGAGACCT TGTGGTCGATAATGGTTTGTTGCATATGTAGACTAGTAGCTAGGAAATGC GAAACATTAGCTTTAGGACCTGCCTTCCTCCGGTCATCCCTTTCCATTCA CCCTTTATTTTTCGCTAGTATTTGATTCTCTGCTGCCTGATTTTGCTGCC TCTTGATTGCTGTGCTCTAGGGGACAATGCACGCGGTGGTGAAGGAAACG ATGACAAGCATCCGGCGGGACCGTCCAGTCCATCTTCTGGGCATTGGTGG AATCTCCGACATTTTTCACGGGGTACGTGAGCATGGGACCGGGCAAATGT AGGGGTGTGGCAATGGTTACAGCGGGAGGCCAGGCATCCTTACGTATCGA GTTTGCGTGTTATTGTTTGTGGCGGTAGTGGTGGGGCATGCCATGCTGTA TTTGTTTTAGGGAAAATGTGGATCTGAGGATAGAGATGGTTAGAGTGGTA TCCTTTCCAAAACGGGTCAAATTATCGTACGTAGTTTTACTATTTGCGTT GGTATCTTCCTTCTTTACATTGAACTGTGAAATATTACCCTTTTTCTGTG GTCTCGTAGTGCGTGATGTCACAACGCTGAACCGAATAATTCATTTTTTT CTTATACCGTAGTCCTCTCTCTTTCCTTCTCCCCCCCCCTCCCCCGCGGA GAATGCTCCCTATATGAAAAAGGGAGAGAGATCTCTATGAAAAGATTTAG GGAAAATCGAAGAATGCGATAGAGAGGACTTTGAATCCTAGAATTGAAAA ATAAGACTATAGCGGTTCTAGGAGACAGAAATGTGCCTGACACCCGTGTT GCAGCCCATATGAAACGGACAAAAATCCCAACCGCAAAATACGGCTTCCT ATTGAAACGGGGGAAGGGGACGTAACTTTGGGGCTCATCCAGAGGACCTC CAAAATGGATTCGCACGTTTGGCATCATGTTGTCGCGTCGCCTGATGCCC CTATAGCTCGCCGAGCAAGGGGCGTGCACCAGAGAGACGTGGGGAGGTCG TGTGGTCAATAGTCTAGCAACTACAACATGCAGAACATGACCACGCTTTC CTCCCACCCTCTCTCTCTTCGGCGTTTGTTTGTGTTTACAGGTTCGTCAG GGAATCGATACATTCGACTGCGTCCAACCGACCAGGCTCGGGAGACACGG CAGTGCCTTAGTGAAGGCCAAGTTTTGGGAGGAGGATAAGTTGGAACAAG ACCAAGCGGAATGTACCACCGGAAGCATAGGCAAGAAAAGACTGCCACAG CGCCAGAAACCGCGGGAACACGTAAAAATTACCAAGGGTCAGTATCGCAG CGACAACAGGCCTATCGACAAGGATTGCGGGTGTCCGACGTGCAAGGACG GGTAAGTGGTGGACGACACCCAGAGGTATACATGATTACGTCATATGGTA TACAAGGTGCAAGAGGGGTAGATGGGTGCCTTTGGGGAGATGAAGGGGGG GGGGGGGGGAAGCATTCCCCTACGCTTGTGCAAAGGGCTTGCTAGCTTGC AGTGGTAGTGCACGATGAGCGAAGCAGCAGACGGCAACTAGCCTGTTGCG GCTTTTCAATGTCTTGTTGAATGTGGCTATGTAGTTGCTGCTCGCGCGTG TACTCATGTTTTGTTTAGTTCTATCTCATTTTCGGTATTTTTTTTTTTAA TAGCTTTGTGTCTTATTTTGCAAATAGCCTCAGTGTTTGTTTACTCGGCT CCATTTGTTTATGAATTGGGTTCGATGCCGACCTGCTGTACTCTGAGGAC ATCACCATGTGAGGCAAAGCATGTTATCTTTCGTTAGTGTGGATAAAAAA AAGTGCAGCGCGTCTACAAGTACACACAAATACACCCAGTCCGTGTCGCG TGGCCAGTCGGGGTTCTTCGATTGCCTCTTTTTTGGCCAGGTAGATGAGT CATGTGTTCATACTATATGCTAATCGCTCAGCACGTTTTTTTTTTGTTTT TTTTTTAAACCCCGGAAGGCTGAGGTAAAAACCTTTTCCGCTGCTTCCAC ATCCAGGTATTAATCTCTCAGCACGTTCAAACGTTTCACCCCCCGGATAG TATGAATAAAGCATCCGTAATGGTTAGGGGCCTGTAATATTCGTTTAGGG TGAAGATGATTAGGCTCTAAGAAATCTCCCGGAAAAGAAAGGCAATTTGC AGTTTTGTTCTCCAGGCAAACGCGCCACTAAGGACTCATCTGCATGTATT CTACCCGACAACTGGCCAACTAAGGATCCATATCACCCCCCGATTGAACA CGAATACTTCGAGCATTCGCGACAAATACCCAACAGTGTCCGCCAGAGGA TTCAGCATGGGCACGTTTATTCTCTGTGCCCCGGACCATCTACGACAACT CCAAATACTTGTTGGACGGATAAATAGGGTATCAACCCTTGATTATCCAC CATATGAAACGCAGGCAAGTACTTTTCATTTTCGTCGCGAATCCTCGAAA AATTCGCGTTTGTCGGGGGGACGATCCATTTGCAGTTATTTTCATCCAGG CGAATGCCCTACTACGGAACCAGTTGCATATATTCAACTCGACAAGCGCC CCGCCGAGGATCCATTTGCAGTTGTATTCATCCAGACGAATGCCCCACTA CGGAACCATTTGCATGTATTCAACTAGACAGATGTCTCACGAAGGATTCC ATTGTAGCTGTTTTCCCCCGGACGGATGCTCCATTACGGAATCATTTCCA GCTGCCCCCGCCCCCCACCCCTATAAATACCGATGATACAATCAGTGCAC GTCTAATACAGTGCTTGTCCGACGTGTCGGATGATACAGAGTACATTAAA TGCACTAGGTGTGGTAGTAATCGCGGGATAATGGAGAAATTTCGACTATA CTGTCCAGCATTTCGGATGGTGCAGATCCTACAGAGTACATTGAATACTC TATTGACTACTGCTTTGTTACTGTTGTTCACTCGTGTCTTGCATTCGCAT TTGTCCGGGGGTTGAAACGTTTCACCTTCTGGACGAATTAGTACGAATAC TTGGAGAATCCGCGAAGAGAACGTAAAAACGTACTCGCCTGAAGGTTCAA CATGAGCACATTTGTTTTTACATGTGCCCCGGACCGTGTACGATTGCTCC GAATAATGCTAAAACGAATAAATAGGGGGTCGGTACTTTATTCCGTGTGT TTGTACATGCTAAAACTCAGGCGAATACTTTTCAATTGATCGTCGCGAAT GCTTCAGATATGTTTTCATATTTGTCCGGGGGGGGGTGGTGTTTTCGTCT GCATTGCAGTATCAATCTTTTGTTACGCTTATACTGTTACCAAAGGGGCC GTAAAAGACCTGCTGAATAGCAAGTAGCCGTCAGGAAGGTCAGCGTTAAG ATGACATGAAAAAACAGTAGAGCGACAGTATGTACGGCAATAAACCCAGG GACTTTGTATCTCTCAGTTCCGACGCCGATGCCCCCCCCTATAATTACTA TACTAGAGAGTGGATTTAGCCATGATTATAGGCTGAATAACTTGATCATG AACCGCATCTGTGAAACACGTTCTTGTTGTGAAACTACTTTATAATGGTG CAGGGAGCTCATTATATGGATCAATATTTTGACCCGGGTTCCGGGGTTAG CATGTGCCTGTTTGTGGTGCGTCAGCTTGTGTATATTCTGTCAAAGACAC GTATCCCCTCCCTGCCCTTCTCACATATCCACCACACCTACCCCGGCACA TACAGCTATTCGAGGGCTTACCTCCAGCACTTGATGAAGGCGGGCGAGCT ACTGGGGGGACTGCTGGTATCGCAGCACAACGTTTACTTCATGAACGAGC TCATGACGGCGATACGCCGTGCCGTAAGGGAGGGCACATTAGACGAAGAG GAGAAAAAATGGGTGGCCCCTGGACTGCGCTCGTGGGATTTCCAGACTCA GGAGGCGTCGGCGC
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Coding sequence (CDS) from alignment at H-paniculata_contig8188:181..5394+

>mRNA_H-paniculata_contig8188.16207.1 ID=mRNA_H-paniculata_contig8188.16207.1|Name=mRNA_H-paniculata_contig8188.16207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1620bp|location=Sequence derived from alignment at H-paniculata_contig8188:181..5394+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATAGACGAGTGTACGCCATTTCACGTAGAGCGGGAGTACACGGAGGCGTC
CATGCACAGAACGCACCGCTGGGCTTTGCGCAGCCTCCGAGAGTTTATCG
ACCATGACGACGGCTCGCAAGCGATAGACGAGTGTACGCCATTTCACGTA
GAGCGGGAGTACACGGAGGCGTCCATGCACAGAACGCACCGCTGGGCTTT
GCGCAGCCTCCGAGAGTTTATCGACCATGACGACGGCTCGCAAGCGCTGT
ATGGTATTGTGCAGGGAGGGATTTTCCCCGACTTGCGAAAAGAGGCGGTG
GCTTTTGTCAACAATCACCCCTTCTTTGGGATAGCTGTTGGGGGAAGTCT
TGGGGCAGACAAGCTGTATGGTATTGTGCAGGGAGGGATTTTCCCCGACT
TGCGAAAAGAGGCGGTGGCTTTTGTCAACAATCACCCCTTCTTTGGGATA
GCTGTTGGGGGAAGTCTTGGGGCAGACAAGGGGACAATGCACGCGGTGGT
GAAGGAAACGATGACAAGCATCCGGCGGGACCGTCCAGTCCATCTTCTGG
GCATTGGTGGAATCTCCGACATTTTTCACGGGGGGACAATGCACGCGGTG
GTGAAGGAAACGATGACAAGCATCCGGCGGGACCGTCCAGTCCATCTTCT
GGGCATTGGTGGAATCTCCGACATTTTTCACGGGGTTCGTCAGGGAATCG
ATACATTCGACTGCGTCCAACCGACCAGGCTCGGGAGACACGGCAGTGCC
TTAGTGAAGGCCAAGTTTTGGGAGGAGGATAAGTTGGAACAAGACCAAGC
GGAATGTACCACCGGAAGCATAGGCAAGAAAAGACTGCCACAGCGCCAGA
AACCGCGGGAACACGTAAAAATTACCAAGGGTCAGTATCGCAGCGACAAC
AGGCCTATCGACAAGGATTGCGGGTGTCCGACGTGCAAGGACGGGTTCGT
CAGGGAATCGATACATTCGACTGCGTCCAACCGACCAGGCTCGGGAGACA
CGGCAGTGCCTTAGTGAAGGCCAAGTTTTGGGAGGAGGATAAGTTGGAAC
AAGACCAAGCGGAATGTACCACCGGAAGCATAGGCAAGAAAAGACTGCCA
CAGCGCCAGAAACCGCGGGAACACGTAAAAATTACCAAGGGTCAGTATCG
CAGCGACAACAGGCCTATCGACAAGGATTGCGGGTGTCCGACGTGCAAGG
ACGGCTATTCGAGGGCTTACCTCCAGCACTTGATGAAGGCGGGCGAGCTA
CTGGGGGGACTGCTGGTATCGCAGCACAACGTTTACTTCATGAACGAGCT
CATGACGGCGATACGCCGTGCCGTAAGGGAGGGCACATTAGACGAAGAGG
AGAAAAAATGGGTGGCCCCTGGACTGCGCTCGTGGGATTTCCAGACTCAG
GAGGCGTCGGCGCTATTCGAGGGCTTACCTCCAGCACTTGATGAAGGCGG
GCGAGCTACTGGGGGGACTGCTGGTATCGCAGCACAACGTTTACTTCATG
AACGAGCTCATGACGGCGATACGCCGTGCCGTAAGGGAGGGCACATTAGA
CGAAGAGGAGAAAAAATGGGTGGCCCCTGGACTGCGCTCGTGGGATTTCC
AGACTCAGGAGGCGTCGGCG
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