mRNA_H-paniculata_contig8188.16207.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: D7FNG2_ECTSI (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG2_ECTSI) HSP 1 Score: 391 bits (1004), Expect = 8.420e-132 Identity = 191/306 (62.42%), Postives = 228/306 (74.51%), Query Frame = 1
Query: 1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFW-EEDKLEQDQAE------------------------------------CTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAPGLRSWDFQTQEAS 807
+DECTPFHV+++YT++SMHRTHRWA+RSLREFID DDG+QALYGI+QGG++PDLR EAV FVN PFFGIAVGGSLGADK TMH VV TM ++RRDRPVHLLGIGGI+DIFHGVRQG+DTFDCV PTRLGRHG ALVKA FW E +LE+++A +G + KKR P PREHV + KG+YR D+R ID+DCGCPTC+ GY+RAY+ HL +AGELLGG+LVSQHNV+FMNELMT+IR A+ EG L EEE KW+APGLR+ DF + A+
Sbjct: 174 LDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSHTMANVRRDRPVHLLGIGGIADIFHGVRQGVDTFDCVHPTRLGRHGGALVKASFWTREQELEEERANQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDVRKKRHPV--VPREHVNLLKGRYREDHRVIDEDCGCPTCRGGYTRAYINHLGRAGELLGGMLVSQHNVFFMNELMTSIRTAIAEGRLAEEEDKWLAPGLRARDFHKRAAA 477
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: Q5ENP0_HETTR (Chloroplast queuine tRNA ribosyl transferase (Fragment) n=1 Tax=Heterocapsa triquetra TaxID=66468 RepID=Q5ENP0_HETTR) HSP 1 Score: 319 bits (817), Expect = 6.520e-107 Identity = 152/256 (59.38%), Postives = 186/256 (72.66%), Query Frame = 1
Query: 1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAP 768
+DECTPFHV++ YT +M R+HRWA+RSL EF HDDG+QALYGI+QGG+ DLR E+VAFVN PFFG A+GGSLGAD+ TMHAVV T R DRP+HLLGIGGI DIFHGVR GIDTFDCV PTRLGRHG ALV+A++W+E++ P+ + REH+ + K ++R D RPID CGC TC++ +SR YL HL++A E LGG L S HNVYF+N +M AIR A+R GTL +EE WV P
Sbjct: 20 LDECTPFHVDKAYTARAMRRSHRWAVRSLTEFAAHDDGTQALYGIIQGGVHEDLRAESVAFVNRQPFFGTAIGGSLGADRATMHAVVGYTAARCRPDRPIHLLGIGGIRDIFHGVRCGIDTFDCVHPTRLGRHGGALVQARYWDEEQ------------------PESRVTREHIHLEKARFRDDIRPIDSTCGCYTCRN-FSRGYLHHLLRAQETLGGTLASLHNVYFVNRMMAAIRVAIRNGTLAQEEAVWVHP 256
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A7R9UGF4_9STRA (tRNA-guanosine(34) queuine transglycosylase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGF4_9STRA) HSP 1 Score: 319 bits (817), Expect = 2.180e-105 Identity = 150/260 (57.69%), Postives = 192/260 (73.85%), Query Frame = 1
Query: 1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAPGLRS 780
+DECTPFHV ++YTE SMHR+HRWALRSL EFI DDGSQALYGI+QGG++ DLR++A +FVN+ PFFG A+GGSLG K TM+ +V ET + +RRDRP+HLLGIG + DIF GVR GIDTFDCV PTR+ RHG ALVKA WEE+ G++ LP REH + + +YR D+RPID C C TC++ +SR Y++HL+KA E L G L++ HN+++MN+LM A+R A+R+GTLDEEEK W+ P S
Sbjct: 117 LDECTPFHVTKDYTEQSMHRSHRWALRSLEEFIRGDDGSQALYGIIQGGVYKDLRRQAASFVNDWPFFGHAIGGSLGDSKTTMYDIVSETASLLRRDRPIHLLGIGSVKDIFAGVRMGIDTFDCVHPTRIARHGGALVKAHHWEEE-----------GALSHDSLP-----REHTNLMRARYRDDDRPIDSSCECYTCQN-FSRGYIRHLLKADESLAGTLLTVHNIHYMNKLMAAVREAIRKGTLDEEEKLWLHPRTSS 359
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A0G4EBX0_VITBC (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EBX0_VITBC) HSP 1 Score: 317 bits (812), Expect = 1.170e-103 Identity = 159/259 (61.39%), Postives = 186/259 (71.81%), Query Frame = 1
Query: 1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHD-DGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAPGL 774
+DECTPF+VE+ YTE+SM R+HRW LRSL+EF D QALYGIVQGG P LR E+ FVN PFFG A+GGSLGAD+ TMH+VV T S+RRDRP+HLLGIGG+ DIFHGVR GIDTFDCV PTRLGRHG ALV+ FW+ D GS G R K +EH+ + K ++ D+RPID CGC TC++ +SRAYL HL+KAGE LGG LVS HNV+FMN LM IR A+R GTLDEE KWV P L
Sbjct: 187 LDECTPFNVEKSYTESSMRRSHRWGLRSLQEFSRLDCQQRQALYGIVQGGTCPSLRDESTHFVNTTPFFGSAIGGSLGADRATMHSVVALTAKSLRRDRPIHLLGIGGVRDIFHGVRHGIDTFDCVHPTRLGRHGGALVRRDFWDTD-----------GSGGGSRSD---KVKEHINLKKSPFKRDSRPIDASCGCYTCRN-FSRAYLHHLLKAGEQLGGTLVSLHNVFFMNRLMRDIRSAIRSGTLDEERSKWVHPAL 430
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A0G4I7T1_9ALVE (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I7T1_9ALVE) HSP 1 Score: 318 bits (814), Expect = 1.260e-102 Identity = 152/265 (57.36%), Postives = 187/265 (70.57%), Query Frame = 1
Query: 1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDG-------SQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAPGL 774
+DECTPF V +EYTE +M R+HRWA RSL EF++ + +QALYGIVQGG++P LRKE+ F N HPFFG+A+GGSLGADK M V T +RRDRP+HLLG+GG+ DIFHGV GIDTFDCV PTRLGRHG ALVK KFWEE + + + +G EH + KG ++ D+RPID +CGC TC++ YSRAYL H K+GEL+GG LV+QHNVYFMNELM +IR A+RE L+EE+ KWV P L
Sbjct: 271 LDECTPFRVTKEYTEGAMKRSHRWAFRSLSEFVNGQEERRRSGRPTQALYGIVQGGVYPSLRKESCEFNNEHPFFGVAIGGSLGADKRMMRKTVAVTCRMLRRDRPIHLLGVGGVRDIFHGVANGIDTFDCVHPTRLGRHGGALVKRKFWEEGLPPTSKGKDSVMKVG-----------EHFNVAKGLFKHDDRPIDSECGCATCRN-YSRAYLHHCFKSGELVGGSLVAQHNVYFMNELMASIRAAIRENRLEEEKAKWVHPDL 523
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A7S4GH72_9EUGL (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GH72_9EUGL) HSP 1 Score: 320 bits (819), Expect = 1.790e-102 Identity = 153/254 (60.24%), Postives = 184/254 (72.44%), Query Frame = 1
Query: 1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWV 762
+DECTPF+V++EYT S R+HRWA+RSL EF+ DDG+QALYGI+QGG +PDLR E++ F N PFFG A+GGSLGADKG MH VV T R DRP+HLLGIGG++DIFHGVR GIDTFDCV PTRLGRHG ALV A +WE++ P + REHV I K ++R D RPID+ CGC TC++ +SR YL HL KA E LGG LV+ HNVY+MN LM AIR A+R GTLDEE++KWV
Sbjct: 370 LDECTPFNVDKEYTAQSTRRSHRWAIRSLDEFVRGDDGTQALYGIIQGGTYPDLRMESIEFTNRQPFFGTAIGGSLGADKGMMHDVVATTAKHCRTDRPIHLLGIGGVTDIFHGVRYGIDTFDCVHPTRLGRHGGALVMAHYWEQED------------------PDARHFREHVHIPKARFRLDTRPIDETCGCYTCRN-FSRGYLHHLFKAKEALGGTLVAIHNVYYMNRLMGAIREAIRNGTLDEEQRKWV 604
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A7S1IB19_9EUGL (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IB19_9EUGL) HSP 1 Score: 305 bits (781), Expect = 6.640e-96 Identity = 145/258 (56.20%), Postives = 188/258 (72.87%), Query Frame = 1
Query: 1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAPGL 774
+DECTPF+V++EYT AS R+HRWA+RSL EFI DDG+QALYGI+QGG++ DLR+E++ F N+ PFFG A+GGSLGA K MH +V T R+DRP+HLLGIGG+ DIF+GVR GIDTFDCV PTRL RHG ALVKAK+W+E+ G G ++ +E + + +R D RPIDK CGC TC++ ++R YL HL+KAGE L G L++ HNVY+MN LM++IR A+++GTLDEEE WV P +
Sbjct: 435 LDECTPFNVDKEYTAASTRRSHRWAVRSLDEFIRTDDGTQALYGIIQGGVYDDLRRESIDFTNSQPFFGTAIGGSLGATKSMMHDIVTYTALRCRQDRPIHLLGIGGVRDIFNGVRAGIDTFDCVHPTRLARHGGALVKAKYWDEE---------APGMEGARK-------KECISLKNASFRRDTRPIDKTCGCYTCQN-FTRGYLHHLIKAGESLVGTLLTVHNVYYMNSLMSSIRLAIQKGTLDEEETVWVHPDI 675
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A836CCU6_9STRA (tRNA-guanine(15) transglycosylase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCU6_9STRA) HSP 1 Score: 297 bits (760), Expect = 3.200e-94 Identity = 154/300 (51.33%), Postives = 194/300 (64.67%), Query Frame = 1
Query: 1 IDECTPFHVEREYTEASMHRTHRWALRSLREFI-DHDDGSQ--ALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLE---QDQAECTTGS-------------------------IGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGT-LDEEEKKWVAPGLRSWDFQTQEA 804
+DECTPFHV++EYT AS R+HRWALRSL EF+ ++G+Q ALYGI+QGG++ DLR E+ AFVN PFFGIAVGGSLGA M+ VV TM +RRDRPVHLLGIGG++DIF+GV GI TFDCV PTRLGRHG ALV+ + W + Q T + + Q PR +++ KGQ+R D RP+D +CGCPTC GYSRAYL H ++AGEL+GG L++QHNV+ MN LM +R A+ GT L++ E W+APGLRS D +A
Sbjct: 204 LDECTPFHVDKEYTAASTRRSHRWALRSLNEFVRTANEGAQQQALYGIIQGGVYRDLRAESAAFVNAQPFFGIAVGGSLGASAADMYRVVDMTMAMVRRDRPVHLLGIGGVADIFNGVSHGIGTFDCVHPTRLGRHGGALVRVRHWPKSACSLAVQSSPPVHTNPRXXXXXXXXXXXXXXXXXXXXXXXXXXSRGGGEGQVPRASIQLAKGQFRGDARPVDAECGCPTCAAGYSRAYLHHCVRAGELVGGALLTQHNVWTMNALMADVRAAIAAGTPLEQVEDHWLAPGLRSADIVAADA 503
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A7S3UNN8_HETAK (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNN8_HETAK) HSP 1 Score: 295 bits (755), Expect = 4.140e-94 Identity = 140/258 (54.26%), Postives = 181/258 (70.16%), Query Frame = 1
Query: 1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWVAPGL 774
+DECT +H+ ++ T SM +HRWALRSL EFI DDGSQALYGI+QGG++ DLR E+ F+N+ PFFG A+GGSLG TMH +VK T +R DRP+HLLGIGGI D+F+GV +GIDTFDCV PTRLGRHG ALV A +W D + + + G P EHV + + ++ D RP+D DC CPTC++ YSRAYL H +KAGE LGGLL+SQHNV+FMN++M IR ++ +G LDE ++ +V L
Sbjct: 235 LDECTAYHIGKDGTAESMRMSHRWALRSLAEFIRGDDGSQALYGIIQGGVYDDLRVESAEFINSQPFFGTAIGGSLGDSSRTMHDIVKFTAGLVREDRPIHLLGIGGIKDVFNGVSEGIDTFDCVHPTRLGRHGGALVAAAWWRADHAPRPTPQQIIKNNG---FP------EHVNVVRAHFKEDPRPLDPDCSCPTCQN-YSRAYLNHCLKAGESLGGLLISQHNVHFMNKMMERIRESIPQGKLDEVKESYVGKAL 482
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Match: A0A1W6N307_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Candidatus Nucleicultrix amoebiphila FS5 TaxID=1414854 RepID=A0A1W6N307_9PROT) HSP 1 Score: 288 bits (736), Expect = 1.410e-92 Identity = 148/254 (58.27%), Postives = 175/254 (68.90%), Query Frame = 1
Query: 1 IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIFPDLRKEAVAFVNNHPFFGIAVGGSLGADKGTMHAVVKETMTSIRRDRPVHLLGIGGISDIFHGVRQGIDTFDCVQPTRLGRHGSALVKAKFWEEDKLEQDQAECTTGSIGKKRLPQRQKPREHVKITKGQYRSDNRPIDKDCGCPTCKDGYSRAYLQHLMKAGELLGGLLVSQHNVYFMNELMTAIRRAVREGTLDEEEKKWV 762
+DECTPFHV++ YTE SMH THRW LRSL EF + G QA+YGIVQGG++PDLRK A AFVN+HPFFGIAVGGSLGA K M VV M I RPVHLLGIGGISDIF+GVR+GIDTFDCV PTRL RHG ALV+ FW L+ D GS G EH+ + +++ D+ PID+ C C TCK +SRAYL HL+KA ELL ++ HNV FMN LM AIR A+ E L+EE+K W+
Sbjct: 169 LDECTPFHVDKSYTEKSMHLTHRWGLRSLEEFKRTNSGQQAIYGIVQGGVYPDLRKIAAAFVNSHPFFGIAVGGSLGATKEQMAEVVNSVMNEISPQRPVHLLGIGGISDIFNGVREGIDTFDCVHPTRLARHGGALVRPDFW----LKND------GSGG-----------EHISLKGSRFKDDDLPIDESCPCSTCKT-FSRAYLHHLIKAQELLVYQALTIHNVTFMNRLMRAIRTAIIENRLEEEQKNWM 400 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8188.16207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8188.16207.1 >prot_H-paniculata_contig8188.16207.1 ID=prot_H-paniculata_contig8188.16207.1|Name=mRNA_H-paniculata_contig8188.16207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=270bp IDECTPFHVEREYTEASMHRTHRWALRSLREFIDHDDGSQALYGIVQGGIback to top mRNA from alignment at H-paniculata_contig8188:181..5394+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8188.16207.1 ID=mRNA_H-paniculata_contig8188.16207.1|Name=mRNA_H-paniculata_contig8188.16207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5214bp|location=Sequence derived from alignment at H-paniculata_contig8188:181..5394+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8188:181..5394+ >mRNA_H-paniculata_contig8188.16207.1 ID=mRNA_H-paniculata_contig8188.16207.1|Name=mRNA_H-paniculata_contig8188.16207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1620bp|location=Sequence derived from alignment at H-paniculata_contig8188:181..5394+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |