mRNA_H-paniculata_contig8168.16192.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8168.16192.1
Unique NamemRNA_H-paniculata_contig8168.16192.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig8168.16192.1 vs. uniprot
Match: A0A835ZGF0_9STRA (Putative GOT1-membrane protein required for ER to Golgi transport n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGF0_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.520e-55
Identity = 96/139 (69.06%), Postives = 116/139 (83.45%), Query Frame = 2 
Query:  242 MSDNRKIGTGLLALGGIFLFLGVMFFFDAGLLAIGDVLFLSGITMTIGTRRTFVFFFKRRQLRGNLFFFGGIALVFFNRPFFGMILQVVGFLNLFGPFIPIAVQAMRQVPLLGNFLSLPLVSTMVDKLAGSTSRGRRAP 658
            + DN+K+GTGLL LG +FLF+GV+ FFDA LLA+GDVLFL+GITMTIG RRTFVFFFKR+QLRGNLFFFGGI LV     F GMILQV+GFLNLFGPFIPIAV AMR +P++G+ L+LP++S +VD++AGS     R P
Sbjct:    3 LDDNKKMGTGLLILGFVFLFMGVILFFDANLLALGDVLFLTGITMTIGARRTFVFFFKRKQLRGNLFFFGGILLVLVRWAFVGMILQVLGFLNLFGPFIPIAVAAMRTLPVIGDILALPVISPLVDRIAGSQQNTDRRP 141
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BLAST of mRNA_H-paniculata_contig8168.16192.1 vs. uniprot
Match: A0A6H5JZM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZM1_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 3.380e-53
Identity = 98/141 (69.50%), Postives = 110/141 (78.01%), Query Frame = 2 
Query:  239 MMSDNRKIGTGLLALGGIFLFLGVMFFFDAGLLAIGDVLFLSGITMTIGTRRTFVFFFKRRQLRGNLFFFGGIALVFFNRPFFGMILQVVGFLNLFGPFIPIAVQAMRQVPLLGNFLSLPLVSTMVDKLAGSTSRGRRAPV 661
            M+SDNR+IG GLLALGGIFL LGVM  FD G             TMTIGTRRTFVFFFKR+Q RGNL FFGG+ LVF N    GM  QVVGFLNLFGPFIPIAVQA+R  P++GN L+LP+VS++VDKLAGS+SRGRRAPV
Sbjct:    1 MVSDNRQIGMGLLALGGIFLLLGVMMLFDPGXXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQARGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRGTPVVGNLLNLPVVSSLVDKLAGSSSRGRRAPV 141
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BLAST of mRNA_H-paniculata_contig8168.16192.1 vs. uniprot
Match: G4TM97_SERID (Probable GOT1-Membrane protein required for ER to Golgi transport n=2 Tax=Serendipita TaxID=358905 RepID=G4TM97_SERID)

HSP 1 Score: 154 bits (389), Expect = 9.760e-42
Identity = 70/131 (53.44%), Postives = 101/131 (77.10%), Query Frame = 2 
Query:  242 MSDNRKIGTGLLALGGIFLFLGVMFFFDAGLLAIGDVLFLSGITMTIGTRRTFVFFFKRRQLRGNLFFFGGIALVFFNRPFFGMILQVVGFLNLFGPFIPIAVQAMRQVPLLGNFLSLPLVSTMVDKLAGS 634
            ++D +KIG GL + G  F+FLGVM FFD GLLA+G++LF+SG+T+ IG ++TF FF ++ +LRG + FFGGI LVFF RPF GMI++  GFLNLFG F P+ +  +RQ+P++GNFL++P +    D++AG+
Sbjct:    3 LTDAQKIGVGLTSFGAFFMFLGVMLFFDGGLLALGNILFVSGLTLIIGPQKTFYFFARKNKLRGTICFFGGILLVFFKRPFIGMIVETFGFLNLFGDFFPVILSFLRQLPVIGNFLNMPYIKAAADRMAGT 133
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BLAST of mRNA_H-paniculata_contig8168.16192.1 vs. uniprot
Match: A0A067CE71_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CE71_SAPPC)

HSP 1 Score: 153 bits (387), Expect = 1.980e-41
Identity = 82/136 (60.29%), Postives = 98/136 (72.06%), Query Frame = 2 
Query:  239 MMSDNRKIGTGLLALGGIFLFLGVMFFFDAGLLAIGDVLFLSGITMTIGTRRTFVFFFKRRQLRGNLFFFGGIALVFFNRPFFGMILQVVGFLNLFGPFIPIAVQAMRQVPLLGNFLSLPLVSTMVDKLAGSTSRG 646
            MM DNRKIGT LL +G +FLFLGVM FFDA LLAIGDVLFLSG+ MTIG  RT  FF ++ + RG + F GGI LV    P  GM +Q  GFLNLFG F P+AV  +RQ P+LG  L+LP++  +VDKLAG+  RG
Sbjct:    1 MMDDNRKIGTLLLGVGFLFLFLGVMLFFDAALLAIGDVLFLSGLAMTIGLSRTIKFFTRKDRWRGIVCFLGGIFLVMIRYPIIGMCVQSFGFLNLFGSFFPVAVAFLRQTPVLGTVLNLPVIGDIVDKLAGAQKRG 136
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BLAST of mRNA_H-paniculata_contig8168.16192.1 vs. uniprot
Match: H3G8V1_PHYRM (Uncharacterized protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3G8V1_PHYRM)

HSP 1 Score: 151 bits (381), Expect = 1.490e-40
Identity = 78/136 (57.35%), Postives = 99/136 (72.79%), Query Frame = 2 
Query:  239 MMSDNRKIGTGLLALGGIFLFLGVMFFFDAGLLAIGDVLFLSGITMTIGTRRTFVFFFKRRQLRGNLFFFGGIALVFFNRPFFGMILQVVGFLNLFGPFIPIAVQAMRQVPLLGNFLSLPLVSTMVDKLAGSTSRG 646
            M+ DNRKIGT LL LG  FL LGV+ FFDA +LA+GDVLFLSG+ +TIG  RT  FF ++ + RG + F GGI LV    P  GMI+Q  GFLNLFG F P+AV  +RQ P++GN L+LP++S +VD+LAG+  RG
Sbjct:    1 MLDDNRKIGTLLLGLGFAFLLLGVLMFFDAAMLALGDVLFLSGVALTIGLSRTVRFFTRKERWRGIVCFLGGILLVMLRYPMIGMIIQSFGFLNLFGSFFPVAVAFLRQTPVIGNVLNLPVISDIVDRLAGAQKRG 136
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BLAST of mRNA_H-paniculata_contig8168.16192.1 vs. uniprot
Match: A0A5D6XZN9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZN9_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.090e-40
Identity = 80/136 (58.82%), Postives = 98/136 (72.06%), Query Frame = 2 
Query:  239 MMSDNRKIGTGLLALGGIFLFLGVMFFFDAGLLAIGDVLFLSGITMTIGTRRTFVFFFKRRQLRGNLFFFGGIALVFFNRPFFGMILQVVGFLNLFGPFIPIAVQAMRQVPLLGNFLSLPLVSTMVDKLAGSTSRG 646
            M+ DNRKIGT LL +G  FL LGV+ FFDA LLA+GDVLFL G+ +TIG  RT  FF +R + RG + F GGI LV    P  GM LQ  GFLNLFG F P+AV  +RQ P++GN LSLP++S +VD+LAGS+ RG
Sbjct:    1 MLDDNRKIGTLLLGVGFAFLLLGVLLFFDAALLALGDVLFLCGLALTIGLSRTVRFFTRRERWRGIVCFLGGILLVLLRFPIIGMALQSFGFLNLFGSFFPVAVAFLRQTPVVGNVLSLPVISDVVDRLAGSSKRG 136
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BLAST of mRNA_H-paniculata_contig8168.16192.1 vs. uniprot
Match: A0A1Q3DZK0_LENED (Got1-domain-containing protein n=2 Tax=Omphalotaceae TaxID=72117 RepID=A0A1Q3DZK0_LENED)

HSP 1 Score: 150 bits (378), Expect = 3.970e-40
Identity = 71/131 (54.20%), Postives = 97/131 (74.05%), Query Frame = 2 
Query:  242 MSDNRKIGTGLLALGGIFLFLGVMFFFDAGLLAIGDVLFLSGITMTIGTRRTFVFFFKRRQLRGNLFFFGGIALVFFNRPFFGMILQVVGFLNLFGPFIPIAVQAMRQVPLLGNFLSLPLVSTMVDKLAGS 634
            ++D +KIG  L   G +F+ LGVM FFD  LLA+G++LF+SG+T+ IG R+TF FF +R +LRG + F GGI +VFF  PFFGMI++  GFLNLFG F P+ +  MRQ+P +G  LSLP + T+VDK++GS
Sbjct:    3 LTDGQKIGVALTTFGALFMLLGVMLFFDGALLALGNILFVSGLTLIIGPRKTFYFFARREKLRGTICFIGGILMVFFKWPFFGMIIETFGFLNLFGDFFPVVITFMRQLPFIGTVLSLPGIRTVVDKISGS 133
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BLAST of mRNA_H-paniculata_contig8168.16192.1 vs. uniprot
Match: K3X7C2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7C2_GLOUD)

HSP 1 Score: 150 bits (378), Expect = 4.090e-40
Identity = 76/136 (55.88%), Postives = 100/136 (73.53%), Query Frame = 2 
Query:  239 MMSDNRKIGTGLLALGGIFLFLGVMFFFDAGLLAIGDVLFLSGITMTIGTRRTFVFFFKRRQLRGNLFFFGGIALVFFNRPFFGMILQVVGFLNLFGPFIPIAVQAMRQVPLLGNFLSLPLVSTMVDKLAGSTSRG 646
            M+ DNRKIGT LL +G +F+ LGV+ FFDA LLA+GDVLFL G+ +TIG  RT  FF ++ + RG + F GGI LV    P  GMI+Q  GFLNLFG F P+AV  +RQ P++G+ L+LP++S +VD+LAGS+ RG
Sbjct:    1 MLDDNRKIGTLLLGIGFVFIMLGVLLFFDAALLALGDVLFLCGLALTIGLTRTIRFFTRKERWRGIVCFLGGIVLVMLRYPIIGMIIQSFGFLNLFGSFFPVAVAFLRQTPVVGSVLNLPVISDVVDRLAGSSKRG 136
[Close]
BLAST of mRNA_H-paniculata_contig8168.16192.1 vs. uniprot
Match: A0A485LD29_9STRA (Aste57867_19031 protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A485LD29_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.220e-40
Identity = 79/133 (59.40%), Postives = 96/133 (72.18%), Query Frame = 2 
Query:  248 DNRKIGTGLLALGGIFLFLGVMFFFDAGLLAIGDVLFLSGITMTIGTRRTFVFFFKRRQLRGNLFFFGGIALVFFNRPFFGMILQVVGFLNLFGPFIPIAVQAMRQVPLLGNFLSLPLVSTMVDKLAGSTSRG 646
            DNRKIGT LL LG +FLFLGVM FFD+ LLAIGDVLFLSG+ +TIG  RT  FF +  + RG + F GGI LV F  P  GM +Q  GFLNLFG F P+AV  +RQ P++G  L+LP++  +VDKLAG+  RG
Sbjct:    5 DNRKIGTLLLGLGFLFLFLGVMLFFDSALLAIGDVLFLSGLALTIGLTRTIKFFTRPERWRGIVCFLGGIVLVMFRYPIIGMCVQTFGFLNLFGSFFPVAVAFLRQTPVIGPVLNLPVIGDVVDKLAGAQKRG 137
[Close]
BLAST of mRNA_H-paniculata_contig8168.16192.1 vs. uniprot
Match: A0A5M3MUF3_CONPW (Got1-domain-containing protein n=2 Tax=Boletales TaxID=68889 RepID=A0A5M3MUF3_CONPW)

HSP 1 Score: 149 bits (377), Expect = 5.560e-40
Identity = 71/131 (54.20%), Postives = 99/131 (75.57%), Query Frame = 2 
Query:  242 MSDNRKIGTGLLALGGIFLFLGVMFFFDAGLLAIGDVLFLSGITMTIGTRRTFVFFFKRRQLRGNLFFFGGIALVFFNRPFFGMILQVVGFLNLFGPFIPIAVQAMRQVPLLGNFLSLPLVSTMVDKLAGS 634
            +SD +KIG  L   G +F+FLGVM FFDA LLA+G++LF+SG+T+ IG ++TF FF +++++RG + F GGI LVF   PF GMI++  GFLNLFG F P+ +  MRQ+P +G FLSLP + T+VD+L+GS
Sbjct:    3 LSDGQKIGVALTTFGVLFMFLGVMLFFDAALLALGNMLFVSGLTLIIGPQKTFYFFARKQKMRGTICFIGGILLVFLKYPFIGMIVETFGFLNLFGDFFPVVITFMRQLPFIGTFLSLPYIRTVVDRLSGS 133
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8168.16192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZGF0_9STRA1.520e-5569.06Putative GOT1-membrane protein required for ER to ... [more]
A0A6H5JZM1_9PHAE3.380e-5369.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
G4TM97_SERID9.760e-4253.44Probable GOT1-Membrane protein required for ER to ... [more]
A0A067CE71_SAPPC1.980e-4160.29Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]
H3G8V1_PHYRM1.490e-4057.35Uncharacterized protein n=23 Tax=Peronosporaceae T... [more]
A0A5D6XZN9_9STRA2.090e-4058.82Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1Q3DZK0_LENED3.970e-4054.20Got1-domain-containing protein n=2 Tax=Omphalotace... [more]
K3X7C2_GLOUD4.090e-4055.88Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A485LD29_9STRA4.220e-4059.40Aste57867_19031 protein n=9 Tax=Aphanomyces TaxID=... [more]
A0A5M3MUF3_CONPW5.560e-4054.20Got1-domain-containing protein n=2 Tax=Boletales T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8168contigH-paniculata_contig8168:1605..5434 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score151.0
Seed ortholog evalue4.2e-34
Seed eggNOG ortholog112098.XP_008611152.1
Preferred nameGOLT1A
KEGG rclassRC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799,ko:K14396
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00980,ko00982,ko00983,ko01524,ko03015,ko05164,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map03015,map05164,map05200,map05204,map05225,map05418
Hectar predicted targeting categorysignal anchor
GOsGO:0000003,GO:0000137,GO:0000139,GO:0001664,GO:0001890,GO:0001893,GO:0001932,GO:0001934,GO:0002791,GO:0002793,GO:0003006,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005794,GO:0005795,GO:0005798,GO:0005802,GO:0005886,GO:0006810,GO:0006873,GO:0006874,GO:0006875,GO:0006886,GO:0006888,GO:0006892,GO:0006895,GO:0007154,GO:0007165,GO:0007186,GO:0007200,GO:0007204,GO:0007275,GO:0007565,GO:0008104,GO:0008150,GO:0008285,GO:0009888,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010817,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016192,GO:0016197,GO:0016324,GO:0016482,GO:0019220,GO:0019222,GO:0019725,GO:0022414,GO:0022602,GO:0023051,GO:0023052,GO:0023056,GO:0030003,GO:0030134,GO:0030135,GO:0031090,GO:0031224,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031410,GO:0031773,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0031985,GO:0032268,GO:0032270,GO:0032276,GO:0032278,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0033036,GO:0033684,GO:0033686,GO:0034613,GO:0036477,GO:0042127,GO:0042147,GO:0042325,GO:0042327,GO:0042592,GO:0042698,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043408,GO:0043410,GO:0044057,GO:0044060,GO:0044297,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0044706,GO:0045177,GO:0045184,GO:0045937,GO:0046697,GO:0046883,GO:0046887,GO:0046907,GO:0048193,GO:0048511,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050804,GO:0050806,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051480,GO:0051482,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060112,GO:0060123,GO:0060124,GO:0060135,GO:0060255,GO:0061458,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071705,GO:0071855,GO:0071944,GO:0072503,GO:0072507,GO:0080090,GO:0090087,GO:0090276,GO:0090277,GO:0097458,GO:0097708,GO:0098588,GO:0098590,GO:0098771,GO:0098791,GO:0099177,GO:0120025,GO:1902531,GO:1902533,GO:1903530,GO:1903532
EggNOG free text desc.vesicle-mediated transport
EggNOG OGsCOG0284@1,KOG1743@2759
Ec32 ortholog descriptionVesicle transport protein, Got1/SFT2-like
Ec32 orthologEc-11_000530.1
EC2.5.1.18
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03019
Exons3
Model size1380
Cds size426
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8168.16192.1prot_H-paniculata_contig8168.16192.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8168 2321..5196 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931023.771136-UTR-H-paniculata_contig8168:1604..23201622931023.771136-UTR-H-paniculata_contig8168:1604..2320Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8168 1605..2320 -
1691481555.3760295-UTR-H-paniculata_contig8168:1604..23201691481555.3760295-UTR-H-paniculata_contig8168:1604..2320Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8168 1605..2320 -
1622931023.8540323-UTR-H-paniculata_contig8168:5196..54341622931023.8540323-UTR-H-paniculata_contig8168:5196..5434Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8168 5197..5434 -
1691481555.4202087-UTR-H-paniculata_contig8168:5196..54341691481555.4202087-UTR-H-paniculata_contig8168:5196..5434Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8168 5197..5434 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931023.8061876-CDS-H-paniculata_contig8168:2320..24821622931023.8061876-CDS-H-paniculata_contig8168:2320..2482Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8168 2321..2482 -
1691481555.3884778-CDS-H-paniculata_contig8168:2320..24821691481555.3884778-CDS-H-paniculata_contig8168:2320..2482Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8168 2321..2482 -
1622931023.818559-CDS-H-paniculata_contig8168:3305..34631622931023.818559-CDS-H-paniculata_contig8168:3305..3463Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8168 3306..3463 -
1691481555.3991306-CDS-H-paniculata_contig8168:3305..34631691481555.3991306-CDS-H-paniculata_contig8168:3305..3463Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8168 3306..3463 -
1622931023.8350406-CDS-H-paniculata_contig8168:5090..51961622931023.8350406-CDS-H-paniculata_contig8168:5090..5196Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8168 5091..5196 -
1691481555.4122655-CDS-H-paniculata_contig8168:5090..51961691481555.4122655-CDS-H-paniculata_contig8168:5090..5196Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8168 5091..5196 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8168.16192.1

>prot_H-paniculata_contig8168.16192.1 ID=prot_H-paniculata_contig8168.16192.1|Name=mRNA_H-paniculata_contig8168.16192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp
MMSDNRKIGTGLLALGGIFLFLGVMFFFDAGLLAIGDVLFLSGITMTIGT
RRTFVFFFKRRQLRGNLFFFGGIALVFFNRPFFGMILQVVGFLNLFGPFI
PIAVQAMRQVPLLGNFLSLPLVSTMVDKLAGSTSRGRRAPV*
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mRNA from alignment at H-paniculata_contig8168:1605..5434-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8168.16192.1 ID=mRNA_H-paniculata_contig8168.16192.1|Name=mRNA_H-paniculata_contig8168.16192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3830bp|location=Sequence derived from alignment at H-paniculata_contig8168:1605..5434- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGCACAATTGCTGATTGTACGACACAGCGAGAGAAAGGCAGACAGGAGG
GGCAGCACAGACATTGTGAACAGAGAATATCACAAGCACGAGCTTCTCCG
GTACAAAGTCGCGATTGAAGATTAGTGTCGGACTCTGGCTTCGAAGTTTT
GTTAATAGGGTCTTCTATCAACTGTGTGGAGAGGGCCTTGTTGTGTTGGT
TTTGCTGTGTGGTATCGCAGACAGAGCGAGGGGGAGCCATGATGTCCGAC
AACAGGAAAATAGGAACAGGATTACTGGCGCTAGGGGGTATCTTCTTGTT
TCTAGGCGTCATGTTCTTCTTCGACGCGGGGCTGCTGGCAATCGGTACGG
TTGATTTTGCGCTGTCGTTTTGCTGGAAACTGGATTAAAAAGAATATAAC
GGTTTTCGATGTATTATAACAACTGACAATTGTAGAGGGCACGAGGCACA
GTAGAGCAGTAGTAGCTGCGGTGTAGACAGAAGCATGGCATGTACGACAT
CTTGACACATGCAGTAAACAAGGTATTACGCAAATTTGCGTACGAGCCAC
ACCATTCTTGACAACGTGTTCGTTGGAATTCGATCCGAAACTGAAAAATC
AGTTCATGAAGTGGATCGTACCACACCACAGACTAGTACAGGCAGTAAAG
ACGCTGATTAGCTCCAAACTTGACTAAATACTTGACTGTTTGCTAGTTTT
GTTCAGTACAGTTTACGGTTCGCGCACGTTTTACTTATAAGGCGGCCCTG
ACAAGTGATGCATGGATTGGTGGCGAGGTGGTGATAACTGTGGAGATTTC
ATTAAGCTGATCAGAGTCAATACGCCGTCGGTATCGTTCGTCAAACTGAC
GTGTTGTTCACAATTCGACTCAAAGCTGCAGAATACTGTATACTGTGTAT
TCAAGTACAATGGTCTGCATCTTTTCTCTATACGAAACCCTGATAGCTGA
AGTAGTAATCTCCGATCTTCAATTTCAACGATTTCGCTCGCTCTCGTATA
CTATGACGATTTCCCGACCATTTGTGATGGTCACAGTTAACCCACACTGA
TACCGTCACCGCAAAATTGGCTAGTGCCTGCTGGTAAGGCTGAAGGGTGT
AATAAATCGTTAGCGCCAGTTTCCATATAATCTATAGCCCCTATCTAATG
ACTATAGCTCTTGAGAAAAAGAGGAAAACGATGTCTATGGCATCATCACG
AGGCCAAGGAGCTGCCGCTGTCCAAACAGACAGCCCAGTACAAACAGTGA
ATACGGCCTGGACAAGTAGTTGGCATGGTTCATGGTTCTGCCCACGACAG
CTGCAGCGCTCGACATTTGTTATTAGGTGCCTTTTTTGTTCTGAAACAGC
CTAATGCGGTACTAAAAGTTATTGAGATGTATCAAATAATCTTGGTTTTT
ATTTTTGTCATTTAGTGAATGCGATACCGTAATTTTTTCAATACAACGAA
CAGAACGAGTCCGATGCCCGTGCCAAACCGTATGAACATGAAGTGTTGAC
TCAACAAGGAACCAACAAAGTCCCTAACAAACTGTAAGTATACGTCATTC
GACACAGTACGTAAACCCAAAACAGATCAAACGCGCGCGAATTGCCAATT
ATATGAACGCCCGACTGAATACAACACTGTGGAGTTGGCTAGCAATGCTG
CACGAACCAGACGTAAACTTTTGCGGTATTTTTTACGGGAGGGGTTATAT
TCAACGTGTATAATTAAGATGTTACAATTTTTCAGCAATTTTTTTTTTTG
ACAATGATGAAGCCTCAAGATGAGTTGTCGAGAAAACTGCTTCCCTCGAC
GAGTAGTATACGGTTGTACTCTACGAGTAAACTCCGGTCCTGAAGGTTAC
CCCCTTTTCTTCGATTTTCCGAGCGCCTTACAGTCGAGAAGTTCTCACCC
CTCTTCCCCCACCGCCTCTTGTGTATGCCGGATACTCGTGAATGATTTTG
TGACGGTGCTGCGGACAACAGGCGACGTGTTATTTCTTTCGGGCATAACG
ATGACGATTGGAACCCGACGAACGTTCGTGTTTTTCTTCAAGAGGAGGCA
ATTGCGGGGTAATTTATTCTTTTTTGGTGGAATCGCGCTGGTGTTCTTCA
ACCGGCCCTTCTTCGGAATGATTCTACAGGTCAGAGTTTTGAGTCGGAAA
TATCACGAATCTCAAGATAAGCATGTAGATGGCTGCTTTTCGATGCCTAT
GTTTCGGCACCGAAACGACAGGTAGGCTACCCCGATAGTTATCATCAATA
CGATCAATTCCATTGGACTTGAGCACGGCGTGTACCATACCCTCTTAGCA
CTGTGGAGAAAGCGAGCAAAACTTTTGACGAATTGGGTAGGTCGCTCTTT
TGACTTGGTCACACCAAACCAACGACGTAGCCAGTTTTGCGGTGCCTCTG
ATACGATCGGTGTGTGCTATTCATGTATTTTGAGTACGCTTTAGCCTCTT
CAATTATGTATCTGGTCATGGCTTACCCCATAGGTGTGTTTATGGTTGGA
GGGTAGCGGGATTGTGGGTTTGCCACTTAAATCAGATGCCAGGTTATATG
CGCGGAATTCAGCCAAGGTGTTGGATCCCCAGATCAACTCATCCACAAAA
AGCGATGGATACGGCATTGTCATTCCAGGTACATCAGCAGGCAGCTCTTT
GAAGCATTCGAAAAATTATGAGATATTGCGGGCACGTACTGTCGAACCAA
TTTCTTGATAATCATGGGAGCAAACCACATTGTAGCACGCATTTTCGGAA
GCATTCGGTATGACCCTCTTGATATTTGGCCAACAGAAATGGACACCACT
CGTACTGTGGCCACAAACGGCAACGAACACCTCATGGTGTGCATGATGTG
TTAAAAACGATATCTGCCTCCCCCCCGACCCCGCCCCCGCCGATGCTGAT
GCCCGCCCTTGCCTCTGACCTGGTGTACATACATATACCTATCTCACTAC
AGGTGGTGGGGTTTCTCAATCTGTTCGGGCCGTTCATCCCGATCGCAGTT
CAAGCAATGCGACAAGTTCCTTTGTTGGGTAATTTCCTCAGCCTTCCTTT
AGTGTCGACAATGGTGGACAAGTTGGCTGGGTCAACTAGCCGGGGGCGGC
GAGCTCCGGTGTAAATGACCTAGAAATAGGCTGCGCGTTCGCATATAGTA
GTAGTGTACTGCTGATGATATTTGCATGCCATTACAACGGGCGCGGTTAG
ATTCGAGTGTTGGGGGGGGGTTCAGTAGCCAAGGTAAATATTAGATAACA
CGTAAAAAAACGCAGCACAAGTTAATCTGGTGCAGCGTTGTATGTCAACT
TGGTAGTATTGCTTTTGGCCGATATGACATTGCAATAGTTCACACTTCTG
TTATTGTTCCCTATATATATATTTATACATATATATATATATATATATAT
ATGTATATGGCGGTTACATTTTGTCGTCGTAGCCGTCGCTGTTACAAGTT
GGTAAATTTGCGGATAAAGTACTGGATTGTAGCGTTCACTCTGTGCTTGT
CTTGTTTTTGTTCCTGTCTGTACGTAGTAGGGGAATGATGGCGAGTGGCG
CAGGCTGTATCCAGTGCCCATAGCGGACGATGTCGGGTTTTACTCGTATG
TTGGATGTAGTTCTTGCCGTCACTCTGTAACATGAACAACTGAAATGGGC
GCCCAAAACTATCGGTACTGTCTCAAAGCAACGCGGATCATCGTTAATTT
CAAGAACCCATGAAGAGAGGGGGTTGAGATGCTATTGGGGGCGTCATATC
CCATCAGTGAATACGTGAAGGTGATACTGGTTGTCGTTGCGCACTGATTC
TTTCATTCCGTACTCCAAGTATCTTCTGAC
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Coding sequence (CDS) from alignment at H-paniculata_contig8168:1605..5434-

>mRNA_H-paniculata_contig8168.16192.1 ID=mRNA_H-paniculata_contig8168.16192.1|Name=mRNA_H-paniculata_contig8168.16192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at H-paniculata_contig8168:1605..5434- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGTCCGACAACAGGAAAATAGGAACAGGATTACTGGCGCTAGGGGG
TATCTTCTTGTTTCTAGGCGTCATGTTCTTCTTCGACGCGGGGCTGCTGG
CAATCGATGATGTCCGACAACAGGAAAATAGGAACAGGATTACTGGCGCT
AGGGGGTATCTTCTTGTTTCTAGGCGTCATGTTCTTCTTCGACGCGGGGC
TGCTGGCAATCGGCGACGTGTTATTTCTTTCGGGCATAACGATGACGATT
GGAACCCGACGAACGTTCGTGTTTTTCTTCAAGAGGAGGCAATTGCGGGG
TAATTTATTCTTTTTTGGTGGAATCGCGCTGGTGTTCTTCAACCGGCCCT
TCTTCGGAATGATTCTACAGGCGACGTGTTATTTCTTTCGGGCATAACGA
TGACGATTGGAACCCGACGAACGTTCGTGTTTTTCTTCAAGAGGAGGCAA
TTGCGGGGTAATTTATTCTTTTTTGGTGGAATCGCGCTGGTGTTCTTCAA
CCGGCCCTTCTTCGGAATGATTCTACAGGTGGTGGGGTTTCTCAATCTGT
TCGGGCCGTTCATCCCGATCGCAGTTCAAGCAATGCGACAAGTTCCTTTG
TTGGGTAATTTCCTCAGCCTTCCTTTAGTGTCGACAATGGTGGACAAGTT
GGCTGGGTCAACTAGCCGGGGGCGGCGAGCTCCGGTGTAAGTGGTGGGGT
TTCTCAATCTGTTCGGGCCGTTCATCCCGATCGCAGTTCAAGCAATGCGA
CAAGTTCCTTTGTTGGGTAATTTCCTCAGCCTTCCTTTAGTGTCGACAAT
GGTGGACAAGTTGGCTGGGTCAACTAGCCGGGGGCGGCGAGCTCCGGTGT
AA
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