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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 938 |
| Cds size | 729 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8164.16189.1 >prot_H-paniculata_contig8164.16189.1 ID=prot_H-paniculata_contig8164.16189.1|Name=mRNA_H-paniculata_contig8164.16189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=243bp
MTRSACTAIGAVVGALSLVSHSGSGTGLRGRHYDNERSGILTQTQQQQQL
QQEQQQQSGRGLRSDGRVGGVSGGDRGRSGYDERGGRSRLRGGGNDRWNG
TSRWRFSGNSDHKQVFCNSIGCPVDHISIEDAQYVKCEGGECTKDQCCRT
MCSSFPCQDGYNVIPEADKVECDKEHCSKEQCCEKDSGDSRHEFVKHGSE
GETKPLSEKKMCSDFACSSDSIPVVDSQTLKCNDGTCDQHQCC back to topmRNA from alignment at H-paniculata_contig8164:8060..10434+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig8164.16189.1 ID=mRNA_H-paniculata_contig8164.16189.1|Name=mRNA_H-paniculata_contig8164.16189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2375bp|location=Sequence derived from alignment at H-paniculata_contig8164:8060..10434+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACCGATCGTCACAATTCCCACATCTAGCAGCTCTAGTTTTTTACCTGTT
TCTCACATCGGCTACAAAATTTTAGTGTGAACTGGCAAGCGTTCGGGTTT
CATCACCGTGACCTCAAACCGTATCTTTGCGCAAATACGCCTAGAGAACG
TTACACCTGGTACATAGCTAGCCGCATTGAAGGACAGCAAGCGAGGACGC
CATCACCATGACGCGAAGCGCTTGTACCGCGATTGGAGCTGTGGTGGGGG
CACTCTCTTTGGTGTCTCACAGTGGCTCTGGTACCGGACTACGAGGACGT
CACTATGACAATGAGCGATCCGGAATCTTGACGCAAACACAGCAGCAACA
GCAGCTACAGCAGGAACAGCAGCAGCAGTCTGGACGCGGGTTGCGCAGTG
ATGGTCGTGTTGGCGGCGTCAGCGGTGGAGACCGAGGACGCTCGGGATAT
GATGAGCGGGGTGGAAGGTCGAGACTGCGCGGCGGCGGTAACGACAGGTG
GAATGGAACATCGAGATGGAGATTTTCTGGTAACTCTGATCACAAACAGG
TACGAAGGGTGTGACATCGGTAGCCGCTGGAATTCCAAGTTGTTGCAGAT
CATGGCTACAGTAAATAAGTTAGTGTTAATCTTATTTTATGCACAGCTGC
AACTCGCCTGGACAGCCGCATGCTAATCTCGCCGAAACATGCGTACTTCC
ATACAACACGCACATGCAGGCTGAGGCCTCTAAATAACAAACTCTAACTG
TGAATGAATGCTGTAGGCGTAGCGCATGTAACGGGACGGGATAGCTCCTT
TAAAACATCACAGGGTTCTTTTAGAACATCGTAGGCTTCTTGAAAAAAAT
CACAGGCTTCTTGTGAGCGCTAAAACTGTTAACCGACTCCACCCATCCTC
TTTAGAATTTAGTTGGGATTACCTGCAAAGGAGGAGACACATCTTAGCTA
CAAACATTTGTAGTTGGTGTTGTAGGATAGTAGCGGCGTTCCAAGTGAGC
GAGTCTGATTATCTGCTTCCTGGTTTTTGTCTGAGCGTTCATGTATCGCA
ATCATTTAATTAGGAAATTGTCCGAAAGTTCTCTCTGTAATTCATGTACA
GCAATCATTTGAGTCGGACAATTTCTGATTAATTGCAAATGGTTCCACTG
GATGAACTCGGAGGCAAAGTCGATATCGGAAATTGTAAATCAGACTCGCT
CGTATAGAACTTACCTCACCTGTGTCAACATTTTAGCCCCCCTTGCACTC
GCTTCCACATGTGATAAACCGCACACGATACACTTACAGTAAGTACACTT
GCTTCAAGGGAGAACACACACTACTTGCTCGCTGAGATGGTTTCCTACCT
GAGCCTGCCTACAGATATACATTTACCCCAACAACGCCCCAACACACCCA
TATCTCTCCATCTCATCAGGTATTCTGCAACTCGATCGGTTGCCCAGTTG
ATCACATCTCTATTGAAGACGCACAGTACGTTAAGTGCGAGGGGGGCGAG
TGCACCAAGGACCAGTGTTGCCGGACGATGTGCTCGTCTTTCCCTTGCCA
AGATGGATATAATGTCATCCCCGAAGCCGACAAAGTTGAATGCGACAAAG
AACACTGCTCGAAAGAGCAATGCTGCGAGAAAGGTGAGGTTGCATCCGGG
AATCTAGTGGATAAAATAATAGGTCTCTCTCTCTACTGACACCTGCCAGG
ACGGGGATATGGGTAGTGCATGTTTTTTCCACATTTTTTTGTATTCCATT
TCGGTCTATCGCCGAAAGGGCGAACCAAGGGGTCACACAGAAAGCAGACT
AATACAACGCTTGTTCCTCGCCTCTTATAGCACCTCTGTGTGTGTACTCT
AGGCAAGTGCTACTGTGACAGATGCGCTTGCTTCAACCTCATATTTGGAC
GTCTGAAGTACTTTTGTCTATTCGGCAGGTGGTGCAAGAAAATAAATCAA
ATCGATGTTGGTATGATTCTCACCTCTGCTGTGTCGCACTTTGTAGGTGA
AAGGATGCGATGAAGGTGATGAAGGTGACCAATAATTCTAGGTGCGCTGT
AAGTTCGGCGTGTGGGTGGTGAATGTATCAGGCCGAGAGTCTGAAGGTGA
TCGTTGGCCGTACTATTCCTGATCGCATCGAAATGCGTTAGCCTAAACAA
AACTCTGTGCAATCGGTCGCTGGCAAAATGATTCCATCACCTCGTTTCTC
AGATTCTGGCGACTCTCGTCACGAGTTCGTCAAACACGGGTCCGAAGGTG
AAACCAAGCCGCTGAGTGAGAAGAAGATGTGCTCGGATTTTGCGTGCTCT
TCGGACTCCATCCCCGTGGTCGACTCCCAAACACTCAAGTGTAACGATGG
CACGTGCGATCAGCATCAGTGCTGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig8164:8060..10434+ >mRNA_H-paniculata_contig8164.16189.1 ID=mRNA_H-paniculata_contig8164.16189.1|Name=mRNA_H-paniculata_contig8164.16189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1458bp|location=Sequence derived from alignment at H-paniculata_contig8164:8060..10434+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGCGAAGCGCTTGTACCGCGATTGGAGCTGTGGTGGGGGCACTCTC
TTTGGTGTCTCACAGTGGCTCTGGTACCGGACTACGAGGACGTCACTATG
ACAATGAGCGATCCGGAATCTTGACGCAAACACAGCAGCAACAGCAGCTA
CAGCAGGAACAGCAGCAGCAGTCTGGACGCGGGTTGCGCAGTGATGGTCG
TGTTGGCGGCGTCAGCGGTGGAGACCGAGGACGCTCGGGATATGATGAGC
GGGGTGGAAGGTCGAGACTGCGCGGCGGCGGTAACGACAGGTGGAATGGA
ACATCGAGATGGAGATTTTCTGGTAACTCTGATCACAAACAGATGACGCG
AAGCGCTTGTACCGCGATTGGAGCTGTGGTGGGGGCACTCTCTTTGGTGT
CTCACAGTGGCTCTGGTACCGGACTACGAGGACGTCACTATGACAATGAG
CGATCCGGAATCTTGACGCAAACACAGCAGCAACAGCAGCTACAGCAGGA
ACAGCAGCAGCAGTCTGGACGCGGGTTGCGCAGTGATGGTCGTGTTGGCG
GCGTCAGCGGTGGAGACCGAGGACGCTCGGGATATGATGAGCGGGGTGGA
AGGTCGAGACTGCGCGGCGGCGGTAACGACAGGTGGAATGGAACATCGAG
ATGGAGATTTTCTGGTAACTCTGATCACAAACAGGTATTCTGCAACTCGA
TCGGTTGCCCAGTTGATCACATCTCTATTGAAGACGCACAGTACGTTAAG
TGCGAGGGGGGCGAGTGCACCAAGGACCAGTGTTGCCGGACGATGTGCTC
GTCTTTCCCTTGCCAAGATGGATATAATGTCATCCCCGAAGCCGACAAAG
TTGAATGCGACAAAGAACACTGCTCGAAAGAGCAATGCTGCGAGAAAGGT
ATTCTGCAACTCGATCGGTTGCCCAGTTGATCACATCTCTATTGAAGACG
CACAGTACGTTAAGTGCGAGGGGGGCGAGTGCACCAAGGACCAGTGTTGC
CGGACGATGTGCTCGTCTTTCCCTTGCCAAGATGGATATAATGTCATCCC
CGAAGCCGACAAAGTTGAATGCGACAAAGAACACTGCTCGAAAGAGCAAT
GCTGCGAGAAAGATTCTGGCGACTCTCGTCACGAGTTCGTCAAACACGGG
TCCGAAGGTGAAACCAAGCCGCTGAGTGAGAAGAAGATGTGCTCGGATTT
TGCGTGCTCTTCGGACTCCATCCCCGTGGTCGACTCCCAAACACTCAAGT
GTAACGATGGCACGTGCGATCAGCATCAGTGCTGCATTCTGGCGACTCTC
GTCACGAGTTCGTCAAACACGGGTCCGAAGGTGAAACCAAGCCGCTGAGT
GAGAAGAAGATGTGCTCGGATTTTGCGTGCTCTTCGGACTCCATCCCCGT
GGTCGACTCCCAAACACTCAAGTGTAACGATGGCACGTGCGATCAGCATC
AGTGCTGC back to top
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