mRNA_H-paniculata_contig8164.16188.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8164.16188.1 vs. uniprot
Match: D8LDW9_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDW9_ECTSI) HSP 1 Score: 247 bits (630), Expect = 6.840e-79 Identity = 117/132 (88.64%), Postives = 126/132 (95.45%), Query Frame = 3
Query: 3 YYDGTIFHRVIKDFMVQGGDPTGTGRGGESCYGGKFEDEIRRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRVSSGMKVVRRMGMVAVNSEDKPMQDMRIIRAKPVVLAPGDHEPAGDQ 398
YYD TIFHRVIKDFMVQGGDPTGTGRGGES +GGKFEDEIRRDLKHTGAGVVSMAN+GPNTNGSQFF+TLGPTPWLDGKHTI GR+SSGMKVVRRMGMVAVNSEDKP+QDMRI+RAKP+VLAPG+ P G+Q
Sbjct: 42 YYDNTIFHRVIKDFMVQGGDPTGTGRGGESSFGGKFEDEIRRDLKHTGAGVVSMANSGPNTNGSQFFVTLGPTPWLDGKHTILGRISSGMKVVRRMGMVAVNSEDKPLQDMRIVRAKPLVLAPGEDGP-GEQ 172
BLAST of mRNA_H-paniculata_contig8164.16188.1 vs. uniprot
Match: A0A835XTW7_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XTW7_9CHLO) HSP 1 Score: 210 bits (534), Expect = 1.360e-64 Identity = 94/119 (78.99%), Postives = 108/119 (90.76%), Query Frame = 3
Query: 3 YYDGTIFHRVIKDFMVQGGDPTGTGRGGESCYGGKFEDEIRRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRVSSGMKVVRRMGMVAVNSEDKPMQDMRIIRAKPV 359
YYDGTIFHR+I DFM QGGDPTGTGRGGES YGGKFEDEI R+LKHTGAG++SMANAGPNTNGSQFF+TL P PWLDGKHTIFGRV+SGM+VV+R+G V N+ D+PM D+RI+RA+PV
Sbjct: 39 YYDGTIFHRIIPDFMAQGGDPTGTGRGGESIYGGKFEDEITRELKHTGAGILSMANAGPNTNGSQFFVTLAPAPWLDGKHTIFGRVTSGMQVVKRLGSVQTNNMDRPMTDVRIVRARPV 157
BLAST of mRNA_H-paniculata_contig8164.16188.1 vs. uniprot
Match: W7U6L7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6L7_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.140e-63 Identity = 93/123 (75.61%), Postives = 108/123 (87.80%), Query Frame = 3
Query: 3 YYDGTIFHRVIKDFMVQGGDPTGTGRGGESCYGGKFEDEIRRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRVSSGMKVVRRMGMVAVNSEDKPMQDMRIIRAKPVVLAP 371
YY+GTIFHR+IKDFM+QGGDPTGTGRGGES YGGKFEDEI RDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGR+S GM +V+++G+V D+P+ D+R+ +A P+ P
Sbjct: 76 YYNGTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKATPLTGPP 198
BLAST of mRNA_H-paniculata_contig8164.16188.1 vs. uniprot
Match: A0A061QI50_9CHLO (Peptidyl-prolyl cis-trans isomerase (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QI50_9CHLO) HSP 1 Score: 207 bits (526), Expect = 6.020e-63 Identity = 91/118 (77.12%), Postives = 108/118 (91.53%), Query Frame = 3
Query: 3 YYDGTIFHRVIKDFMVQGGDPTGTGRGGESCYGGKFEDEIRRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRVSSGMKVVRRMGMVAVNSEDKPMQDMRIIRAKP 356
YYDGT+FHR+IKDFMVQGGDPTGTGRGGES YGGKFEDEI RDLKHTGAG++SMAN+GPNTNGSQFFLTL PTPWLDGKHTIFGRV+ GM +++RMG VA ++ D+P+Q ++I+ A+P
Sbjct: 70 YYDGTVFHRIIKDFMVQGGDPTGTGRGGESVYGGKFEDEITRDLKHTGAGILSMANSGPNTNGSQFFLTLAPTPWLDGKHTIFGRVADGMSILKRMGNVATDANDRPVQIVKILSARP 187
BLAST of mRNA_H-paniculata_contig8164.16188.1 vs. uniprot
Match: A8JGI0_CHLRE (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8JGI0_CHLRE) HSP 1 Score: 205 bits (521), Expect = 1.240e-62 Identity = 90/119 (75.63%), Postives = 109/119 (91.60%), Query Frame = 3
Query: 3 YYDGTIFHRVIKDFMVQGGDPTGTGRGGESCYGGKFEDEIRRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRVSSGMKVVRRMGMVAVNSEDKPMQDMRIIRAKPV 359
YYDGTIFHR+I+DFM QGGDPTGTGRGGES YGGKFEDEI RDLKHTGAG++SMAN+GPNTNGSQFF+TL PTPWLDGKHTIFGRV+SGM V++R+G V ++ D+P+ ++++IRA+PV
Sbjct: 39 YYDGTIFHRIIRDFMCQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVTSGMAVIKRLGNVQTDNLDRPVTEVKVIRARPV 157
BLAST of mRNA_H-paniculata_contig8164.16188.1 vs. uniprot
Match: A0A835Z3Y0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Y0_9STRA) HSP 1 Score: 204 bits (520), Expect = 2.600e-62 Identity = 90/119 (75.63%), Postives = 109/119 (91.60%), Query Frame = 3
Query: 3 YYDGTIFHRVIKDFMVQGGDPTGTGRGGESCYGGKFEDEIRRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRVSSGMKVVRRMGMVAVNSEDKPMQDMRIIRAKPV 359
YY+ T+FHR+I++FMVQGGDPTGTGRGG+S YG KFEDEI R+LKHTGAGVVSMANAGPNTNGSQFF+TL PTPWLDGKHTI GR+S GM VV+RMGMVAV+ +D+P+Q+++I+RA P+
Sbjct: 43 YYNNTVFHRIIRNFMVQGGDPTGTGRGGQSIYGAKFEDEITRELKHTGAGVVSMANAGPNTNGSQFFITLAPTPWLDGKHTILGRISEGMAVVQRMGMVAVDGQDRPLQELKILRATPL 161
BLAST of mRNA_H-paniculata_contig8164.16188.1 vs. uniprot
Match: A0A8K0LW68_9PEZI (Cyclophilin-like domain-containing protein n=1 Tax=Chaetomium sp. MPI-SDFR-AT-0129 TaxID=2823209 RepID=A0A8K0LW68_9PEZI) HSP 1 Score: 204 bits (519), Expect = 2.930e-62 Identity = 92/116 (79.31%), Postives = 105/116 (90.52%), Query Frame = 3
Query: 3 YYDGTIFHRVIKDFMVQGGDPTGTGRGGESCYGGKFEDEIRRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRVSSGMKVVRRMGMVAVNSEDKPMQDMRIIRA 350
YYDGTIFHR+IKDFMVQGGDPTGTGRGG S YG KFEDEIR DLKHTGAG++SMANAGPNTNGSQFFLTL PTPWLDGKHTIFGRV G++V++RMG+V V+ ED+P ++RI+RA
Sbjct: 38 YYDGTIFHRIIKDFMVQGGDPTGTGRGGSSIYGEKFEDEIRDDLKHTGAGILSMANAGPNTNGSQFFLTLAPTPWLDGKHTIFGRVKKGIRVLQRMGLVPVDGEDRPKTEVRIVRA 153
BLAST of mRNA_H-paniculata_contig8164.16188.1 vs. uniprot
Match: A0A175W9V1_9PEZI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Madurella mycetomatis TaxID=100816 RepID=A0A175W9V1_9PEZI) HSP 1 Score: 204 bits (518), Expect = 4.150e-62 Identity = 91/116 (78.45%), Postives = 105/116 (90.52%), Query Frame = 3
Query: 3 YYDGTIFHRVIKDFMVQGGDPTGTGRGGESCYGGKFEDEIRRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRVSSGMKVVRRMGMVAVNSEDKPMQDMRIIRA 350
YYDGTIFHR+IKDFM+QGGDPTGTGRGG S YG KFEDEIR DLKHTGAG++SMANAGPNTNGSQFF+TL PTPWLDGKHTIFGRV G+KVV+RMG+V V+ ED+P +++II+A
Sbjct: 38 YYDGTIFHRIIKDFMIQGGDPTGTGRGGSSIYGDKFEDEIRPDLKHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVKKGIKVVQRMGLVPVDGEDRPKTEVKIIKA 153
BLAST of mRNA_H-paniculata_contig8164.16188.1 vs. uniprot
Match: A0A0D2JJK8_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JJK8_9CHLO) HSP 1 Score: 203 bits (516), Expect = 5.090e-62 Identity = 90/119 (75.63%), Postives = 106/119 (89.08%), Query Frame = 3
Query: 3 YYDGTIFHRVIKDFMVQGGDPTGTGRGGESCYGGKFEDEIRRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRVSSGMKVVRRMGMVAVNSEDKPMQDMRIIRAKPV 359
YYDGTIFHR+I+DFM+QGGDPTGTGRGGES YG KFEDEI R+LKHTGAG++SMANAGPNTNGSQFF+TLGPTPWLDGKHTIFGRV GM V++R+G V ++ DKP D++I+RA+ V
Sbjct: 28 YYDGTIFHRIIRDFMIQGGDPTGTGRGGESIYGSKFEDEITRELKHTGAGILSMANAGPNTNGSQFFITLGPTPWLDGKHTIFGRVCGGMGVIKRLGNVQTDATDKPTTDVKILRARSV 146
BLAST of mRNA_H-paniculata_contig8164.16188.1 vs. uniprot
Match: A0A250XLK5_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XLK5_9CHLO) HSP 1 Score: 203 bits (516), Expect = 7.060e-62 Identity = 88/119 (73.95%), Postives = 108/119 (90.76%), Query Frame = 3
Query: 3 YYDGTIFHRVIKDFMVQGGDPTGTGRGGESCYGGKFEDEIRRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRVSSGMKVVRRMGMVAVNSEDKPMQDMRIIRAKPV 359
YYDGT+FHR+I+DFM+QGGDPTGTGRGGES YG FEDEI R+LKHTGAG++SMANAGPNTNGSQFF+TL PTPWLDGKHTIFGRVSSGM V++R+G V ++ D+P+ +++I+RA+PV
Sbjct: 39 YYDGTVFHRIIRDFMIQGGDPTGTGRGGESIYGSVFEDEITRELKHTGAGILSMANAGPNTNGSQFFVTLAPTPWLDGKHTIFGRVSSGMDVIKRLGNVQTDANDRPVTEVKIVRARPV 157 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8164.16188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8164.16188.1 >prot_H-paniculata_contig8164.16188.1 ID=prot_H-paniculata_contig8164.16188.1|Name=mRNA_H-paniculata_contig8164.16188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp MVQGGDPTGTGRGGESCYGGKFEDEIRRDLKHTGAGVVSMANAGPNTNGSback to top mRNA from alignment at H-paniculata_contig8164:811..3599+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8164.16188.1 ID=mRNA_H-paniculata_contig8164.16188.1|Name=mRNA_H-paniculata_contig8164.16188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2789bp|location=Sequence derived from alignment at H-paniculata_contig8164:811..3599+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8164:811..3599+ >mRNA_H-paniculata_contig8164.16188.1 ID=mRNA_H-paniculata_contig8164.16188.1|Name=mRNA_H-paniculata_contig8164.16188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=714bp|location=Sequence derived from alignment at H-paniculata_contig8164:811..3599+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |