mRNA_H-paniculata_contig8162.16187.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig8162.16187.1 vs. uniprot
Match: A0A6H5JPC9_9PHAE (CitMHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPC9_9PHAE) HSP 1 Score: 204 bits (520), Expect = 1.850e-57 Identity = 103/165 (62.42%), Postives = 124/165 (75.15%), Query Frame = 1
Query: 166 SGAAVFVAAVVICMFCALIRGWKTPEVVVVLALLTVWNAGIVSNEEALSGFHNPGALVIGALFVVTKAVEQSQVADRAARRILGLRTTSTLGFLRLMALTLCMSAFLNNVPVVALMTPVTLGWARTRGFSTEHFLMPVSFVSALGGIVTTVGGGTNLVIQGLLYE 660
+G A FV V++ +F AL RGW + EVVV L+LL VWNAGI+S EALSGF+NPG L IGALFVV ++E S+VAD+AA+ ILGL TT + GF RL+ MSAF NN P++AL+ PVT WAR RGFS LMP++F A GGI+TTVGGGTNLVIQGLLYE
Sbjct: 15 AGEAAFVGVVLVALFFALCRGWYSSEVVVFLSLLVVWNAGIISTAEALSGFNNPGVLAIGALFVVVASIESSKVADKAAKNILGLTTTFSSGFCRLLLCGASMSAFCNNTPILALLIPVTEDWARARGFSPPVLLMPLAFACAFGGILTTVGGGTNLVIQGLLYE 179
BLAST of mRNA_H-paniculata_contig8162.16187.1 vs. uniprot
Match: A0A6H5JJK1_9PHAE (CitMHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJK1_9PHAE) HSP 1 Score: 181 bits (459), Expect = 4.980e-49 Identity = 89/163 (54.60%), Postives = 116/163 (71.17%), Query Frame = 1
Query: 175 AVFVAAVVICMFCALIRGWKTPEVVVVLALLTVWNAGIVSNEEALSGFHNPGALVIGALFVVTKAVEQSQVADRAARRILGLRTTSTLGFLRLMALTLCMSAFLNNVPVVALMTPVTLGWARTRGFSTEHFLMPVSFVSALGGIVTTVGGGTNLVIQGLLYEE 663
A F+ V+ MF +L G KTPE VV L+ VWN G+V+ EALSGF N G L +GALFVV K VE+SQ+AD+AARR+ GLRT+ G R+M+L +SAFLNN PVVAL+ P+T WAR RGFS FL+P+S+ +GG++T +G TNLV+QGL+ +E
Sbjct: 14 AAFMGVVLTAMFISLFVGLKTPETVVFFCLVLVWNVGLVNTTEALSGFSNAGMLAVGALFVVIKGVEKSQLADKAARRVFGLRTSLEAGLGRMMSLCFVLSAFLNNTPVVALLIPITRDWARARGFSPSIFLIPLSYSCIMGGLLTVIGTSTNLVVQGLVLDE 176
BLAST of mRNA_H-paniculata_contig8162.16187.1 vs. uniprot
Match: A0A6U4YV43_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4YV43_HEMAN) HSP 1 Score: 166 bits (420), Expect = 2.550e-47 Identity = 79/160 (49.38%), Postives = 111/160 (69.38%), Query Frame = 1
Query: 181 FVAAVVICMFCALIRGWKTPEVVVVLALLTVWNAGIVSNEEALSGFHNPGALVIGALFVVTKAVEQSQVADRAARRILGLRTTSTLGFLRLMALTLCMSAFLNNVPVVALMTPVTLGWARTRGFSTEHFLMPVSFVSALGGIVTTVGGGTNLVIQGLLYE 660
FV AVV +F L+ +KTPE+ AL+ +WN GI+S+++A SGF N G L +G LFVV +AVE+SQ+A + A+ + G++T G LRL + +S FLNN PVVAL+TP+T WAR RGFS FL+P+S+ + +GG++TTVG TNLV+ GL +
Sbjct: 13 FVCAVVFFLFLGLVTSFKTPEITAFSALVVLWNVGIISSQQATSGFTNSGVLSVGVLFVVIQAVERSQIATKMAKHVFGMQTGVRYGLLRLCSFCFLISGFLNNTPVVALLTPITRDWARARGFSPSTFLIPLSYSTIMGGLLTTVGTSTNLVVSGLAED 172
BLAST of mRNA_H-paniculata_contig8162.16187.1 vs. uniprot
Match: A0A6H5L425_9PHAE (CitMHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L425_9PHAE) HSP 1 Score: 148 bits (373), Expect = 2.010e-37 Identity = 72/125 (57.60%), Postives = 93/125 (74.40%), Query Frame = 1
Query: 286 IVSNEEALSGFHNPGALVIGALFVVTKAVEQSQVADRAARRILGLRTTSTLGFLRLMALTLCMSAFLNNVPVVALMTPVTLGWARTRGFSTEHFLMPVSFVSALGGIVTTVGGGTNLVIQGLLYE 660
+VS +EALSGF+NPG L +G+LFVV K VE+S++ADRAA+ + GLRT T G LRLM L +SAFLNN PVVA++ P+T WA TRGF+ LMP+S+ GG+VT +G TNLV+QGL+ E
Sbjct: 1 MVSTQEALSGFNNPGVLAVGSLFVVIKGVERSRLADRAAKHVFGLRTGFTAGLLRLMGLAFLLSAFLNNTPVVAMLIPITKDWAVTRGFNPALLLMPLSYACIFGGLVTIIGTSTNLVVQGLVIE 125
BLAST of mRNA_H-paniculata_contig8162.16187.1 vs. uniprot
Match: L1IRC1_GUITC (CitMHS domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IRC1_GUITC) HSP 1 Score: 142 bits (358), Expect = 1.480e-35 Identity = 68/130 (52.31%), Postives = 92/130 (70.77%), Query Frame = 1
Query: 262 LLTVWNAGIVSNEEALSGFHNPGALVIGALFVVTKAVEQSQVADRAARRILGLRTTSTLGFLRLMALTLCMSAFLNNVPVVALMTPVTLGWARTRGFSTEHFLMPVSFVSALGGIVTTVGGGTNLVIQGL 651
+ VWNAG+++ +EALSGF N G L +G LFVV +A+E+SQ+A AA+ + G+RT G RL + +SAFLNN PVVAL+TP+T WARTRGF FL+P+SF + LGG++T +G TNLV+ L
Sbjct: 1 MCVVWNAGVITTKEALSGFSNSGMLAVGVLFVVVQAIERSQLAPWAAKHVFGMRTGIRSGLFRLCTMCFFLSAFLNNTPVVALLTPITRDWARTRGFPPSLFLIPLSFSTILGGLLTIIGTSTNLVVAAL 130
BLAST of mRNA_H-paniculata_contig8162.16187.1 vs. uniprot
Match: L1JME9_GUITC (CitMHS domain-containing protein n=3 Tax=Geminigeraceae TaxID=589343 RepID=L1JME9_GUITC) HSP 1 Score: 138 bits (347), Expect = 4.640e-34 Identity = 66/130 (50.77%), Postives = 91/130 (70.00%), Query Frame = 1
Query: 271 VWNAGIVSNEEALSGFHNPGALVIGALFVVTKAVEQSQVADRAARRILGLRTTSTLGFLRLMALTLCMSAFLNNVPVVALMTPVTLGWARTRGFSTEHFLMPVSFVSALGGIVTTVGGGTNLVIQGLLYE 660
+WN+GI++ +EAL+GF N G L IG LFVV +A+E++Q+A AAR + G++T G RL L +SAFLNN PVVAL+TP+T WAR RGF FL+P+SF + LGG++T +G TNLV+ L +
Sbjct: 4 IWNSGIITTQEALAGFSNSGVLAIGVLFVVVQAIERTQLAPWAARNVFGMKTGIRSGLFRLCTLCFVISAFLNNTPVVALLTPITRDWARMRGFPPSLFLIPLSFSTILGGLLTIIGTSTNLVVVALAED 133
BLAST of mRNA_H-paniculata_contig8162.16187.1 vs. uniprot
Match: A0A812JPQ4_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812JPQ4_9DINO) HSP 1 Score: 135 bits (340), Expect = 4.430e-33 Identity = 69/160 (43.12%), Postives = 103/160 (64.38%), Query Frame = 1
Query: 184 VAAVVICMFCALIRGWKTPEVVVVLALLTVWNAGIVSNEEALSGFHNPGALVIGALFVVTKAVEQSQVADRAARRILGLRTTSTLGFLRLMALTLCMSAFLNNVPVVALMTPVTLGWARTRGFSTEHFLMPVSFVSALGGIVTTVGGGTNLVIQGLLYEE 663
V A+++ L +PE V++ AL+ +WN GIVS +AL GF N G + IGALF+V +AV++S+V D AARRILG + + + LR+ L +S F NN P+V L P+ WART + FL+P+S+ S +GG++TT+G TNL++ GLL ++
Sbjct: 14 VLAMILVTLVLLFLEVGSPEQVMLGALVVLWNMGIVSTADALDGFSNTGLISIGALFIVMQAVDKSRVVDYAARRILGAQISDRVVLLRICFLVFSLSGFCNNTPLVVLFMPIVRDWARTHQRAPSTFLIPLSYSSIMGGMLTTIGTSTNLLVNGLLEKQ 173
BLAST of mRNA_H-paniculata_contig8162.16187.1 vs. uniprot
Match: A0A812ND10_SYMMI (Hypothetical protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812ND10_SYMMI) HSP 1 Score: 134 bits (337), Expect = 1.360e-32 Identity = 68/160 (42.50%), Postives = 103/160 (64.38%), Query Frame = 1
Query: 184 VAAVVICMFCALIRGWKTPEVVVVLALLTVWNAGIVSNEEALSGFHNPGALVIGALFVVTKAVEQSQVADRAARRILGLRTTSTLGFLRLMALTLCMSAFLNNVPVVALMTPVTLGWARTRGFSTEHFLMPVSFVSALGGIVTTVGGGTNLVIQGLLYEE 663
V A+++ L +PE V++ AL+ +WN GIVS +AL GF N G + IGALF+V +AV++S+V D AARRILG + + + LR+ L +S F NN P+V L P+ WART + FL+P+S+ + +GG++TT+G TNL++ GLL ++
Sbjct: 14 VLAMILVTLVLLFLEVGSPEQVMLGALVVLWNMGIVSTADALDGFSNTGLMSIGALFIVMQAVDKSRVVDYAARRILGAQISDRVVLLRICFLVFSLSGFCNNTPLVVLFMPIVRDWARTHQRAPSTFLIPLSYSAIMGGMLTTIGTSTNLLVNGLLEKQ 173
BLAST of mRNA_H-paniculata_contig8162.16187.1 vs. uniprot
Match: A0A7S4UG35_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UG35_9DINO) HSP 1 Score: 134 bits (337), Expect = 1.380e-32 Identity = 62/141 (43.97%), Postives = 95/141 (67.38%), Query Frame = 1
Query: 238 PEVVVVLALLTVWNAGIVSNEEALSGFHNPGALVIGALFVVTKAVEQSQVADRAARRILGLRTTSTLGFLRLMALTLCMSAFLNNVPVVALMTPVTLGWARTRGFSTEHFLMPVSFVSALGGIVTTVGGGTNLVIQGLLYE 660
P+ V+ AL+ VW+ G+V+ ++A +GF N L IG+LF+V +AV++S+V DR R +LG +TT RL + +S FLNN P+VAL+ P+ WARTR F+ FL+P+S+ + +GG++T +G TNLV+ GLL +
Sbjct: 26 PDQVMFAALVVVWHLGLVTTQQAFAGFSNSSLLTIGSLFIVARAVDRSKVVDRITRGLLGQKTTERGAVFRLCLAGMALSGFLNNTPLVALLMPIVRDWARTRRFAASKFLLPLSYSTIMGGLLTVIGSSTNLVVNGLLEQ 166
BLAST of mRNA_H-paniculata_contig8162.16187.1 vs. uniprot
Match: A0A813AJF1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AJF1_9DINO) HSP 1 Score: 134 bits (337), Expect = 1.410e-32 Identity = 68/160 (42.50%), Postives = 103/160 (64.38%), Query Frame = 1
Query: 184 VAAVVICMFCALIRGWKTPEVVVVLALLTVWNAGIVSNEEALSGFHNPGALVIGALFVVTKAVEQSQVADRAARRILGLRTTSTLGFLRLMALTLCMSAFLNNVPVVALMTPVTLGWARTRGFSTEHFLMPVSFVSALGGIVTTVGGGTNLVIQGLLYEE 663
V A+++ L +PE V++ AL+ +WN GIVS +AL GF N G + IGALF+V +AV++S+V D AARRILG + + + LR+ L +S F NN P+V L P+ WART + FL+P+S+ + +GG++TT+G TNL++ GLL ++
Sbjct: 14 VLAMILVTLVLLFLEVGSPEQVMLGALVVLWNMGIVSTADALDGFSNTGLMSIGALFIVMQAVDKSRVVDYAARRILGAQISDRVVLLRICFLVFSLSGFCNNTPLVVLFMPIVRDWARTHQRAPSTFLIPLSYSAIMGGMLTTIGTSTNLLVNGLLEKQ 173 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8162.16187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8162.16187.1 >prot_H-paniculata_contig8162.16187.1 ID=prot_H-paniculata_contig8162.16187.1|Name=mRNA_H-paniculata_contig8162.16187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=179bp MKKVLERTSEALIWGSSVRSSSRYLHVLRLDTGLEDTRSRGGSRPADGLEback to top mRNA from alignment at H-paniculata_contig8162:7671..9986+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8162.16187.1 ID=mRNA_H-paniculata_contig8162.16187.1|Name=mRNA_H-paniculata_contig8162.16187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2316bp|location=Sequence derived from alignment at H-paniculata_contig8162:7671..9986+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8162:7671..9986+ >mRNA_H-paniculata_contig8162.16187.1 ID=mRNA_H-paniculata_contig8162.16187.1|Name=mRNA_H-paniculata_contig8162.16187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1074bp|location=Sequence derived from alignment at H-paniculata_contig8162:7671..9986+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |