mRNA_H-paniculata_contig8160.16185.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8160.16185.1 vs. uniprot
Match: D7G7A9_ECTSI (Cation efflux protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A9_ECTSI) HSP 1 Score: 474 bits (1221), Expect = 1.580e-161 Identity = 269/364 (73.90%), Postives = 303/364 (83.24%), Query Frame = 1
Query: 34 PLFHGPHGHDDHTHGPELELELPAGGLVDLQVVGAGGATQTVRAVEAAESSTASHGGHSHGGXXXXXXXXXFH-LDVSSLKTRPTLIRLFLATMCVLALPLWRRSSRLEWAALGGVSLFLAAVDMGKFAIRKLRVQVGALYTGWKAHAELA-STTGLDSKSKESAREVDAITWIGAFVNVSLAGFKFFAGIIGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDDDHPYGHGRFEAIGAVIISAMLMGAGYGIGNHSFEALRELASGGVHTTIPTRLAAVAAAVSIITKEALYRASISTAEVGKRQNSQVLIANAWHHRTDAVSSVVALLAIVGSMCGAPALDPIAGLMVAGMVALTGVQV 1119
PLFHG HGHDDH HGP + GL+++ AGGA + ++ ++ ++SHGGHS XXXXXXXXX +D+++LK RPTLIRLFLA+MCVLA+PLWRRSSRLEWAALGGVS+FLAAVDM KFAI KLRVQVG LY+GWKAH++LA S+ + +S E+AREVDAITW GA VNV LA FK FAGI+GHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPD+DHPYGHGRFEA+GA II+ MLMGAGYGIGNHSFE LRE+ S G H IPTRL AVAA+VSII KEAL+RA T +GKR+NSQVLIANAWHHRTDAVSSVVALLAI GSM GAP LDPIAGLMVAGMVALTGVQV
Sbjct: 58 PLFHGGHGHDDHNHGPAQD------GLLNINHSAAGGAGRA-SSLAVGDTFSSSHGGHSXXXXXXXXXXXXXXXVDMATLKKRPTLIRLFLASMCVLAVPLWRRSSRLEWAALGGVSMFLAAVDMSKFAISKLRVQVGQLYSGWKAHSDLATSSQQANIESAEAAREVDAITWAGALVNVGLAAFKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIALMLMGAGYGIGNHSFETLREVISRGEHAAIPTRLTAVAASVSIIAKEALFRA---TNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMSGAPMLDPIAGLMVAGMVALTGVQV 411
BLAST of mRNA_H-paniculata_contig8160.16185.1 vs. uniprot
Match: A0A7S4DFL3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFL3_HETAK) HSP 1 Score: 291 bits (745), Expect = 6.370e-91 Identity = 158/302 (52.32%), Postives = 211/302 (69.87%), Query Frame = 1
Query: 259 VSSLKTRPTLIRLFLATMCVLALPLWRRSSRLEWAALGGVSLFLAAVDMGKFAIRKLRVQVGALYTGWKAHAELASTTGLDSKSKESAREVDAITWIGAFVNVSLAGFKFFAGIIGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDDDHPYGHGRFEAIGAVIISAMLMGAGYGIGNHSFEALRELAS--------------GGVHTTI--PTRLAAVAAAVSIITKEALYRASISTAEVGKRQNSQVLIANAWHHRTDAVSSVVALLAIVGSMCGAPALDPIAGLMVAGMVALTGVQ 1116
+ SL ++ T+ RL LA MC ++LPL RR SR+E A + VSLFL AV+ GK + ++ +Q + W+ H +L K + +E D +TW+G +VN+ L+ FK AGI G SSAM+ADAGHSLSDL+SD VTL++VRL+RLPPD+DHPYGHGRFEA+GA II+ ML+ A YG+GNHS+E+ + GGV T+ PT++A VAA +SI++KE LYR TA+VG+R NSQVLIANAWHHR+DA+SSV+A + I G+M G P LD +AGLMVAGM++LTG+Q
Sbjct: 25 IPSLSSKRTIARLVLAAMCSISLPLMRRQSRVEVAVVCIVSLFLGAVECGKLMLSQVALQFSGVRRAWEEHQQLEDRMPQRLKEDANVKEADRVTWLGVWVNIGLSVFKLVAGIAGRSSAMVADAGHSLSDLISDGVTLYSVRLARLPPDEDHPYGHGRFEAVGAFIIAMMLIAASYGLGNHSYESFLKAIGYMKIPALGIGGNLDGGVPTSELQPTKIALVAAVISIVSKELLYRV---TAKVGERLNSQVLIANAWHHRSDALSSVIAFVGIGGAMMGVPVLDSLAGLMVAGMLSLTGLQ 323
BLAST of mRNA_H-paniculata_contig8160.16185.1 vs. uniprot
Match: A0A7S2RMB7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMB7_9STRA) HSP 1 Score: 275 bits (702), Expect = 1.800e-83 Identity = 159/290 (54.83%), Postives = 199/290 (68.62%), Query Frame = 1
Query: 274 TRPTLIRLFLATMCVLALPLWRRSSRLEWAALGGVSLFLAAVDMGKFAIRKLRVQVGALYTGWKAHAELASTTGLDSKSKESA---REVDAITWIGAFVNVSLAGFKFFAGIIGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDDDHPYGHGRFEAIGAVIISAMLMGAGYGIGNHSFEALRELASGG-----VHTTIPTRLAAVAAAVSIITKEALYRASISTAEVGKRQNSQVLIANAWHHRTDAVSSVVALLAIVGSMCGAPALDPIAGLMVAGMVALTGVQV 1119
T TL+R T +L LP R SRL+ A V FL AV GK + K+R ++ +LY+ + AH + +S E+A + + ITW G FVN++LAGFK AG+ G S+AMIADAGHSLSDLLSD VTLWAVRLSRLPPD DHPYGHGRFEA+GA+ I+A+L +G G H++ +L E + + T+ PT LA AA VSI++KE LYRA TA VG+R NSQVLIANAWHHR+DA SSVVAL+ IVG++ G P LDP+AGL VAGMVA+TG+QV
Sbjct: 81 TAGTLVRSAAVTSILLLLP--PRHSRLKMALSIAVGCFLVAVGSGKSLVLKVRWRLSSLYSSFLAHQTSTGPSATFVESPEAAMSRKAANRITWAGVFVNLALAGFKLAAGVFGQSAAMIADAGHSLSDLLSDGVTLWAVRLSRLPPDSDHPYGHGRFEALGALAIAALLASTAFGFGGHAYHSLTEFSRASAAGMDLATSTPTLLAVAAAVVSILSKEVLYRA---TAVVGQRLNSQVLIANAWHHRSDAFSSVVALVGIVGALLGQPILDPLAGLCVAGMVAITGLQV 365
BLAST of mRNA_H-paniculata_contig8160.16185.1 vs. uniprot
Match: A0A7S2RL19_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL19_9STRA) HSP 1 Score: 244 bits (624), Expect = 1.200e-73 Identity = 130/204 (63.73%), Postives = 157/204 (76.96%), Query Frame = 1
Query: 523 REVDAITWIGAFVNVSLAGFKFFAGIIGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDDDHPYGHGRFEAIGAVIISAMLMGAGYGIGNHSFEALRELASGG-----VHTTIPTRLAAVAAAVSIITKEALYRASISTAEVGKRQNSQVLIANAWHHRTDAVSSVVALLAIVGSMCGAPALDPIAGLMVAGMVALTGVQV 1119
+ + ITW G FVN++LAGFK AG+ G S+AMIADAGHSLSDLLSD VTLWAVRLSRLPPD DHPYGHGRFEA+GA+ I+A+L +G G H++ +L E + + T+ PT LA AA VSI++KE LYRA TA VG+R NSQVLIANAWHHR+DA SSVVAL+ IVG++ G P LDP+AGL VAGMVA+TG+QV
Sbjct: 4 QSANRITWAGVFVNLALAGFKLAAGVFGQSAAMIADAGHSLSDLLSDGVTLWAVRLSRLPPDSDHPYGHGRFEALGALAIAALLASTAFGFGGHAYHSLTEFSRASAAGMDLATSTPTLLAVAAAVVSILSKEVLYRA---TAVVGQRLNSQVLIANAWHHRSDAFSSVVALVGIVGALLGQPILDPLAGLCVAGMVAITGLQV 204
BLAST of mRNA_H-paniculata_contig8160.16185.1 vs. uniprot
Match: A0A7S2V756_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V756_9STRA) HSP 1 Score: 229 bits (583), Expect = 1.400e-67 Identity = 128/245 (52.24%), Postives = 161/245 (65.71%), Query Frame = 1
Query: 514 ESAREVDAITWIGAFVNVSLAGFKFFAGIIGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDDDHPYGHGRFEAIGAVIISAMLMGAGYGIGNHSFEA-LRELASGGVHTTI-------------------------------------------PTRLAAVAAAVSIITKEALYRASISTAEVGKRQNSQVLIANAWHHRTDAVSSVVALLAIVGSMCGAPALDPIAGLMVAGMVALTGVQ 1116
++ +E D +TW+G + N+ LA FK FAGI+G SSAMIADAGHSLSDL+SD VTLWAVR++RLP D DHPYGHGRFEA+GA +IS MLM AGY +GNH++E+ LR L G+ T++ P ++A VAA VSI++KE LYR TA VGK+ NSQVLIANAWHHR+DA+SS VA+ IVG+ G P LDP+AGLMV+ M+ LTG+Q
Sbjct: 4 DAGKESDRVTWLGVWCNIFLAAFKLFAGIVGRSSAMIADAGHSLSDLVSDGVTLWAVRVARLPADADHPYGHGRFEAVGAFVISVMLMSAGYSLGNHAYESFLRALPYSGIPTSLAGWKVGLLSMMGHMGAASASVTGSAXXXXXXXXXXXVEGFAGMPGKIALVAALVSIVSKELLYRV---TARVGKKLNSQVLIANAWHHRSDALSSFVAVGGIVGATMGLPVLDPLAGLMVSAMLTLTGLQ 245
BLAST of mRNA_H-paniculata_contig8160.16185.1 vs. uniprot
Match: W7U980_9STRA (Cation efflux protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U980_9STRA) HSP 1 Score: 211 bits (538), Expect = 1.050e-58 Identity = 130/308 (42.21%), Postives = 179/308 (58.12%), Query Frame = 1
Query: 337 RRSSRLEWAALGGVSLFLAAVDMGKFAIRKLRVQVGALYTGWKAH-------AELASTTGLDSKSK--ESAREVDAITWIGAFVNVSLAGFKFFAGIIGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDDDHPYGHGRFEAIGAVIISAMLMGAGYGIGNHSFE----------------------ALRE--------LASGGVHTT--------IPTRLAAVAAAVSIITKEALYRASISTAEVGKRQNSQVLIANAWHHRTDAVSSVVALLAIVGSMCGAPALDPIAGLMVAGMVALTGVQV 1119
RR S + LG ++ F+ AV+ K + LR + + W+AH +E TG + S+ A E D +TW+G + N+ L K AG++G S+AM+ADAGH+LSDL+SD VTLWAVR+S LPPDDDHPYGHGRFEA+G++ +SA+L+ + I H+++ ALR LA GG P+ LA VAA SI+ KE LY+ TA VG + NSQV++ANAWHHR+DA+SS++AL IV + G ALDPIAG++V M+ LTG+Q+
Sbjct: 201 RRFSGADVGMLGLIATFVLAVESTKSYLNTLRENIAQIAAAWRAHRSLRLLHSERPLATGGPAVSQLAAGAAESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTLALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQI---TASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQI 505
BLAST of mRNA_H-paniculata_contig8160.16185.1 vs. uniprot
Match: A0A7S4B4U6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B4U6_CHRCT) HSP 1 Score: 203 bits (517), Expect = 4.150e-57 Identity = 122/246 (49.59%), Postives = 167/246 (67.89%), Query Frame = 1
Query: 382 LFLAAVDMGKFAIRKLRVQVGALYTGWKAHAELASTTGLDSKSKESAREVDAITWIGAFVNVSLAGFKFFAGIIGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDDDHPYGHGRFEAIGAVIISAMLMGAGYGIGNHSFEALRELASGGVHTTIPTRLAAVAAAVSIITKEALYRASISTAEVGKRQNSQVLIANAWHHRTDAVSSVVALLAIVGSMCGAPALDPIAGLMVAGMVALTGVQV 1119
L + V G +R LR K HA A T G S +AR ITWIGA VN+ L K AG++G+SSAM++DAGHSLSDL+SD +TL +R+S+LPPDDDHPYGHGRFE++G++ I+ +L+ AG+ G +++ALR + + + +A AA SI++KE L+RA TA +G+R NSQ+L+ANAWHHR+DA+SSVVA+L I G+M G P LDPIAGL+VAGMV+ G+++
Sbjct: 104 LVMHCVIFGSSMVRHLR----------KNHA--AKTAGYSDSS--AAR----ITWIGAAVNLFLTFVKLLAGLLGNSSAMLSDAGHSLSDLISDGLTLITLRMSQLPPDDDHPYGHGRFESLGSLGIAGLLLLAGFSFGASAYDALRRPSLKPLGS-----IALFAAVASILSKEILFRA---TARIGRRLNSQMLMANAWHHRSDALSSVVAVLGIAGAMLGLPVLDPIAGLLVAGMVSSMGLRI 323
BLAST of mRNA_H-paniculata_contig8160.16185.1 vs. uniprot
Match: A0A4D9DA93_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA93_9STRA) HSP 1 Score: 199 bits (505), Expect = 7.030e-57 Identity = 125/294 (42.52%), Postives = 168/294 (57.14%), Query Frame = 1
Query: 337 RRSSRLEWAALGGVSLFLAAVDMGKFAIRKLRVQVGALYTGWKAH-------AELASTTGLDSKSK--ESAREVDAITWIGAFVNVSLAGFKFFAGIIGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDDDHPYGHGRFEAIGAVIISAMLMGAGYGIGNHSFE----------------------ALRE--------LASGGVHTT--------IPTRLAAVAAAVSIITKEALYRASISTAEVGKRQNSQVLIANAWHHRTDAVSSVVALLAIVGSMCGAPALDPIAG 1077
RR S + LG ++ F+ AV+ K + LR + + W+AH +E TG + S+ A E D +TW+G + N+ L K AG++G S+AM+ADAGH+LSDL+SD VTLWAVR+S LPPDDDHPYGHGRFEA+G++ +SA+L+ + I H+++ ALR LA GG P+ LA VAA SI+ KE LY+ TA VG + NSQV++ANAWHHR+DA+SSV+AL IV + G ALDPIAG
Sbjct: 67 RRFSGADVGMLGLIATFVLAVESTKSYLNTLRENIAQIAAAWRAHRSLRLLHSERPLATGGPAVSQLAAGAAESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTLALPSLGPLPFSAFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQI---TASVGIKHNSQVVLANAWHHRSDAISSVMALGGIVAARAGLAALDPIAG 357
BLAST of mRNA_H-paniculata_contig8160.16185.1 vs. uniprot
Match: W2ZQI2_PHYPR (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2ZQI2_PHYPR) HSP 1 Score: 201 bits (511), Expect = 1.760e-56 Identity = 112/213 (52.58%), Postives = 149/213 (69.95%), Query Frame = 1
Query: 526 EVDAITWIGAFVNVSLAGFKFFAGIIGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDDDHPYGHGRFEAIGAVIISAMLMGAGYGIGNHSFEALRELASGGVHTTIPT---------------RLAAVAAAVSIITKEALYRASISTAEVGKRQNSQVLIANAWHHRTDAVSSVVALLAIVGSMCGAPALDPIAGLMVAGMVALTGVQV 1119
E IT +G +VNV++A K G+ HSSA+IADA HSLSDLLSD VTLW+V+++RLPPD HPYG+G++EA+G++ + A+L+ G GIG F+AL+E+ +G T++P LAA AA VSI KEALY A++ ++GK+ NS+VLIANAWHHRTDA+SSVVAL IVGSM G P LDP+AG+ VA M+ TG ++
Sbjct: 82 EAMKITRVGMYVNVAMAATKGAVGLAIHSSALIADAAHSLSDLLSDVVTLWSVKVARLPPDPKHPYGYGKYEAVGSLSVGAILVLCGLGIGADGFQALQEILNGAGATSLPEFNLPFLSEIDRSTQWALAAGAAGVSIGAKEALYHATV---KIGKQANSKVLIANAWHHRTDAISSVVALGGIVGSMAGVPLLDPVAGMAVAAMIVKTGGEI 291
BLAST of mRNA_H-paniculata_contig8160.16185.1 vs. uniprot
Match: A0A6A3S4M0_9STRA (ZT_dimer domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3S4M0_9STRA) HSP 1 Score: 199 bits (507), Expect = 6.370e-56 Identity = 115/245 (46.94%), Postives = 158/245 (64.49%), Query Frame = 1
Query: 460 WKAHAELASTTGLDSKSKESAR----------EVDAITWIGAFVNVSLAGFKFFAGIIGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDDDHPYGHGRFEAIGAVIISAMLMGAGYGIGNHSFEALRELASGGVHTTIPT---------------RLAAVAAAVSIITKEALYRASISTAEVGKRQNSQVLIANAWHHRTDAVSSVVALLAIVGSMCGAPALDPIAGLMVAGMVALTGVQV 1119
W+ A +S S+S+E A+ E IT +G +VNV++A K G+ HSSA++ADA HSLSDLLSD VTLW+V+++RLPPD HPYG+G++EA+G++ + A+L+ G GIG + ++E+ +G T +P LAA AA VSI KEALY A++ ++GK+ NS+VLIANAWHHRTDA+SSVVAL IVGSM G P LDP+AG+ VA M+ TG ++
Sbjct: 44 WQQLANFSSEPSGRSQSQEEAKNPALRSSQGDEAMKITRVGMYVNVAMAASKGAVGLAIHSSALVADAAHSLSDLLSDVVTLWSVKVARLPPDPKHPYGYGKYEAVGSLSVGAILVLCGIGIGADGLQVMQEIWNGAAATQLPEFDIPLLSELDRGTQWALAAGAAGVSIAAKEALYHATV---KIGKQANSKVLIANAWHHRTDAISSVVALGGIVGSMFGVPLLDPVAGMAVAAMIVKTGGEI 285 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8160.16185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8160.16185.1 >prot_H-paniculata_contig8160.16185.1 ID=prot_H-paniculata_contig8160.16185.1|Name=mRNA_H-paniculata_contig8160.16185.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=373bp RRRRRGLIGVWPLFHGPHGHDDHTHGPELELELPAGGLVDLQVVGAGGATback to top mRNA from alignment at H-paniculata_contig8160:3601..10585+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8160.16185.1 ID=mRNA_H-paniculata_contig8160.16185.1|Name=mRNA_H-paniculata_contig8160.16185.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6985bp|location=Sequence derived from alignment at H-paniculata_contig8160:3601..10585+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8160:3601..10585+ >mRNA_H-paniculata_contig8160.16185.1 ID=mRNA_H-paniculata_contig8160.16185.1|Name=mRNA_H-paniculata_contig8160.16185.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2238bp|location=Sequence derived from alignment at H-paniculata_contig8160:3601..10585+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |