mRNA_H-paniculata_contig8153.16175.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig8153.16175.1 vs. uniprot
Match: A0A6H5JTH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH4_9PHAE) HSP 1 Score: 229 bits (584), Expect = 8.980e-70 Identity = 121/259 (46.72%), Postives = 163/259 (62.93%), Query Frame = 3
Query: 57 MASRHKFAGLWFI---------FFLYTGVKAVVNGVAPLRHHVSSPWSRRYHPLSTTRTGGVSDVMMAQGFG----------AKSPKGKGVKSKSRIRAPSQPCACFSGKPYGQCCKPFHDGDKLPEPQELMRARYSAYASVMPEYIMETTHPDHADYGRQDWRQELLTFCKAYRFTGLEVDAPEQDPITPERVYVYFTALMAGADCGRAVSFDEKSVFLLRD-GVWYYKEADKEYEASVELISKRRYQRAARTDKPKG 773
M+SR +W + F + G+ A G+ P + H + WS P S+ + G +++A+GFG ++ K K K++ A S PC CFSG PYG CCKPFHDG+K +P ++MRARY+AYA MP++IM+TTHPDH D+G+ WR +L FC Y+FTGLEV PE+D TP++VYVYFTA+MAGA G AVSFDE+SVF+L D G W Y+ D Y+ SV +ISKR+Y AA+TD+P G
Sbjct: 1 MSSRFALGAVWLLTGVCGRAAAFVVSPGLPAA-PGMQP-QLHPTQRWSGP-GPSSSRQQG---PILLAKGFGDDKGRSKPATKRNKDNKMAKIKTKTPAASAPCPCFSGNPYGDCCKPFHDGEKSAQPVQVMRARYAAYACNMPQFIMKTTHPDHEDFGKPGWRDSILVFCNNYKFTGLEVGQPEEDQDTPDKVYVYFTAMMAGAKVGGAVSFDERSVFVLTDDGEWLYRAPDANYKESVNVISKRKYNAAAKTDRPSG 253
BLAST of mRNA_H-paniculata_contig8153.16175.1 vs. uniprot
Match: D8LLE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE1_ECTSI) HSP 1 Score: 220 bits (560), Expect = 2.520e-67 Identity = 100/165 (60.61%), Postives = 124/165 (75.15%), Query Frame = 3
Query: 282 SRIRAPSQPCACFSGKPYGQCCKPFHDGDKLPEPQELMRARYSAYASVMPEYIMETTHPDHADYGRQDWRQELLTFCKAYRFTGLEVDAPEQDPITPERVYVYFTALMAGADCGRAVSFDEKSVFLLRD-GVWYYKEADKEYEASVELISKRRYQRAARTDKPKG 773
++ A S PC CFSG PYG CCKPFHDG+K P+P ++MRARY+AYA MP++IM+TTHPDH D+ + WR +L FC Y+FTGLEV PE D TP++VYVYFTA+MAGA G AVSFDE+SVFLL D G W Y+ D Y+ SV +ISKR+Y AA+TD+P G
Sbjct: 7 NKTPAASAPCPCFSGNPYGDCCKPFHDGEKSPQPVQVMRARYAAYACNMPQFIMKTTHPDHEDFAKSGWRDSILVFCNNYKFTGLEVGQPEVDQDTPDKVYVYFTAMMAGAKGGGAVSFDERSVFLLTDDGEWLYRAPDANYKESVNVISKRKYNAAAKTDRPSG 171
BLAST of mRNA_H-paniculata_contig8153.16175.1 vs. uniprot
Match: A0A6M1Z103_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1Z103_9BACT) HSP 1 Score: 110 bits (275), Expect = 1.030e-25 Identity = 60/129 (46.51%), Postives = 77/129 (59.69%), Query Frame = 3
Query: 309 CACFSGKPYGQCCKPFHDGDKLPEPQE-LMRARYSAYASVMPEYIMETTHPDHADY--GRQDWRQELLTFCKAYRFTGLEVDAPEQDPITPERVYVYFTALMAGADCGRAVSFDEKSVFLLRDGVWYYK 686
C C SGK Y CC P H ++LPE E LMR+RYSAYA +PEYIM+TTHP++ Y R W+ E+L FCK FTGL++ + E + +V F A + + VSF EKS FL DG W Y+
Sbjct: 3 CPCHSGKSYQACCVPLHRKERLPESAEQLMRSRYSAYALQLPEYIMDTTHPENPTYLEDRSPWQIEILKFCKETTFTGLDILSTEN---RDDEAFVTFFAHLIQNNLD--VSFQEKSRFLKEDGRWLYR 126
BLAST of mRNA_H-paniculata_contig8153.16175.1 vs. uniprot
Match: E6WYY4_NITSE (SEC-C motif domain protein n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) TaxID=749222 RepID=E6WYY4_NITSE) HSP 1 Score: 105 bits (262), Expect = 8.670e-24 Identity = 56/133 (42.11%), Postives = 75/133 (56.39%), Query Frame = 3
Query: 300 SQPCACFSGKPYGQCCKPFHDGDKLPEPQELMRARYSAYASVMPEYIMETTHPDHADYG--RQDWRQELLTFCKAYRFTGLEVDAPEQDPITPERVYVYFTALMAGADCGRAVSFDEKSVFLLRDGVWYYKEA 692
+ PC C SG Y +CC FH G P+ LM++RYSAYA YI+ TTHP++ DY R+ WR+E+L FC+A F GLE+ + I +R V F A ++G EKS+FL+ DG W Y A
Sbjct: 8 NDPCPCGSGVKYKKCCARFHKGALAPDALSLMKSRYSAYAVGDARYIIRTTHPENPDYSEDRKAWREEILNFCRANDFLGLEI--LDFSSIDEKRATVEFVATLSGG------VIREKSLFLMEDGEWLYHSA 132
BLAST of mRNA_H-paniculata_contig8153.16175.1 vs. uniprot
Match: A0A2S9YEV7_9DELT (Uncharacterized protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9YEV7_9DELT) HSP 1 Score: 104 bits (260), Expect = 1.980e-23 Identity = 57/135 (42.22%), Postives = 80/135 (59.26%), Query Frame = 3
Query: 288 IRAPSQPCACFSGKPYGQCCKPFHDGDKLPEPQELMRARYSAYASVMPEYIMETTHPD---HADYGRQDWRQELLTFCKAYRFTGLEVDAPEQDPITPERVYVYFTALMAGADCGRAVSFDEKSVFLLRDGVWYY 683
+R+P+ PC C SG+ + +CC+ H G +P+ LMR+RYSAYA EY+++TT P+ H D R W +E+ F RF LEV E PI +R V F A ++ G+ VSF E+SVF+ RDG W+Y
Sbjct: 1 MRSPNAPCPCGSGRKFKRCCRRLHQGTPAADPEALMRSRYSAYAVGAVEYLLDTTDPEGPQHRD-DRAAWAEEIRRFSTLTRFQKLEVR--EVGPIVDDRAEVLFFAKLSRE--GQDVSFAERSVFVRRDGRWFY 130
BLAST of mRNA_H-paniculata_contig8153.16175.1 vs. uniprot
Match: A0A7W1JMS8_9BACT (Uncharacterized protein n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1JMS8_9BACT) HSP 1 Score: 103 bits (256), Expect = 5.120e-23 Identity = 60/132 (45.45%), Postives = 76/132 (57.58%), Query Frame = 3
Query: 294 APSQPCACFSGKPYGQCCKPFHDGDKLPEPQEL-MRARYSAYASVMPEYIMETTHPDHADYGRQDWRQELLTFCKAYRFTGLEV-DAPEQDPITPERVYVYFTALMAGADCGRAVSFDEKSVFLLRDGVWYY 683
+P C C SGK Y +CCKPFHDG K PE L MR+RY+AY+S +P+YI+ TTHPD+ +QE+L FCK F L++ D E D + YV F A++ G SF EKS F DG W Y
Sbjct: 2 SPKALCPCHSGKSYIECCKPFHDGIKRPENALLLMRSRYAAYSSQLPDYIISTTHPDNVSSLIN--KQEILRFCKNTEFINLKIIDFSEHD----DTAYVTFHAVLK--QNGSDASFTEKSSFKKVDGAWLY 125
BLAST of mRNA_H-paniculata_contig8153.16175.1 vs. uniprot
Match: A0A6M1YID5_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1YID5_9BACT) HSP 1 Score: 98.6 bits (244), Expect = 3.000e-21 Identity = 54/143 (37.76%), Postives = 78/143 (54.55%), Query Frame = 3
Query: 303 QPCACFSGKPYGQCCKPFHDGDKLPEPQELMRARYSAYASVMPEYIMETTHPDHADYGRQ--DWRQELLTFCKAYRFTGLEVDAPEQDPITPERVYVYFTALMAGADCGRAVSFDEKSVFLLRDGVWYYKEADKEYEASVELI 725
Q C C S KPY CCKPFH + P+P +LMR+R+SAYA + YI+ETTH +H D+ + W++E+ FC+A F L++ E I + V F A + G ++ EKS+FL + W Y + VEL+
Sbjct: 3 QKCLCHSNKPYEDCCKPFHLETQYPDPVQLMRSRFSAYALGLVNYIIETTHKEHPDFKKDLDVWKEEIEFFCEATEFVNLKIMEKE---IFQTQANVTFIAYLK--QDGNSIKLFEKSLFLKENERWLY------HSGQVELL 134
BLAST of mRNA_H-paniculata_contig8153.16175.1 vs. uniprot
Match: A0A6M2A2Z5_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M2A2Z5_9BACT) HSP 1 Score: 96.3 bits (238), Expect = 2.010e-20 Identity = 52/128 (40.62%), Postives = 71/128 (55.47%), Query Frame = 3
Query: 309 CACFSGKPYGQCCKPFHDGDKLPEPQ-ELMRARYSAYASVMPEYIMETTHPDHADYG--RQDWRQELLTFCKAYRFTGLEVDAPEQDPITPERVYVYFTALMAGADCGRAVSFDEKSVFLLRDGVWYY 683
C C SG Y +CC+P+H G +LPE +LMR+RYSAYA+ +YI+ETTHP+++ Y R DW++ +L FC F GL++ + T E +F L D VSF E S F W Y
Sbjct: 3 CPCHSGLSYPECCEPYHIGKQLPESALQLMRSRYSAYATKNADYIIETTHPENSSYSANRDDWKESVLFFCNRTSFRGLKIIEVLEG--TQESFVTFFAHLFQNGD---DVSFQETSHFYKVGDRWLY 125
BLAST of mRNA_H-paniculata_contig8153.16175.1 vs. uniprot
Match: A0A7J7IDA3_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDA3_9RHOD) HSP 1 Score: 95.9 bits (237), Expect = 1.030e-19 Identity = 59/155 (38.06%), Postives = 82/155 (52.90%), Query Frame = 3
Query: 240 FGAKSPKGKGVKSKSRIRAPSQ---PCACFSGKPYGQCCKPFHDGDKLP-EPQELMRARYSAYASVMPEYIMETT---HPDHADYGRQDWRQELLTFCKAYRFTGLEVDAPEQDPITPERVYVYFTALMAGADCGRAVSFDEKSVFLLRDGVWYY 683
FG +G G K R P Q PCAC SG+ Y CC P H G ++P E EL+RARYSA+A +P +IM TT +PD+ D + W ++L FC YRF G+E+ ++ +P+ ++ F A + G F E+S F G W Y
Sbjct: 21 FGGFLSRGAGRKRARVDRVPQQSDVPCACGSGRTYQHCCMPVHLGSRVPPEADELLRARYSAFAYRLPAFIMRTTSKTNPDYTDDWNR-WEADILEFCDTYRFPGMEI--LDEKRASPDVCFIQFRANLIYE--GMLGFFIERSRFAKERGRWMY 170
BLAST of mRNA_H-paniculata_contig8153.16175.1 vs. uniprot
Match: A0A7S4NI85_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NI85_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.270e-19 Identity = 67/189 (35.45%), Postives = 94/189 (49.74%), Query Frame = 3
Query: 234 QGFGAKSPKGKGVKSKSRIRAP------SQPCACFSGKPYGQCCKPFHDGDKLPE-PQELMRARYSAYASVMPEYIMETTHPDHADYGRQDWRQELLTFCK---------AYRFTGLEVDAPEQDPITPERVYVYFTALMA------GADCGRAVSFDEKSVFLLRDG---VWYYKEADKEYEASVELI 725
+GFGA P + + R R P SQ C C SG YG+CC+P+H G LP P E++R RYSA+A +P YI++TTHP+ AD WR++ + + K ++ F GLEV E + + +V F + G G+ S E+S FL +DG W Y A E + VE I
Sbjct: 63 KGFGAPPPTYDEIVAGLRTRVPPSDEVESQDCQCGSGSKYGECCRPYHIGSVLPSSPSEVLRTRYSAFAYRLPSYIIQTTHPECAD-----WREDKIGWVKDLDRAGMFDSFEFAGLEVGPEEPGEESADEGFVQFRVRLVTKRSVDGKRAGQETSISERSRFL-KDGEPLCWRY--AGGEVRSDVEGI 243 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8153.16175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8153.16175.1 >prot_H-paniculata_contig8153.16175.1 ID=prot_H-paniculata_contig8153.16175.1|Name=mRNA_H-paniculata_contig8153.16175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bp MASRHKFAGLWFIFFLYTGVKAVVNGVAPLRHHVSSPWSRRYHPLSTTRTback to top mRNA from alignment at H-paniculata_contig8153:773..5365- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8153.16175.1 ID=mRNA_H-paniculata_contig8153.16175.1|Name=mRNA_H-paniculata_contig8153.16175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4593bp|location=Sequence derived from alignment at H-paniculata_contig8153:773..5365- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8153:773..5365- >mRNA_H-paniculata_contig8153.16175.1 ID=mRNA_H-paniculata_contig8153.16175.1|Name=mRNA_H-paniculata_contig8153.16175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1470bp|location=Sequence derived from alignment at H-paniculata_contig8153:773..5365- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |