mRNA_H-paniculata_contig8150.16174.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8150.16174.1
Unique NamemRNA_H-paniculata_contig8150.16174.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig8150.16174.1 vs. uniprot
Match: D8LDY4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY4_ECTSI)

HSP 1 Score: 570 bits (1469), Expect = 4.450e-183
Identity = 323/459 (70.37%), Postives = 355/459 (77.34%), Query Frame = 1 
Query:    1 RFLYDMFINLDADVSHRLEASTTASFLEIYGEDVYDLLSDGHAPGTKR--MQVLEDKNGVFVSGLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTINLTQSIKDDADPNGDPQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDDRPEKKSGYVPYRQSKLTRLLQDALGGNSQTLFLACVSPAADSINETVAALHYANRARNIKNKVVKNTDGAKEEMRRLRSMAAALQMELVREHFRLGEGGCSITYRQTQRTGEGGGDPEATGGPAGLGLGPNAQAEEILGREDVKAYLKL--AKVTEASRKPQGHGAPLLFGSGCADTDASVASSGVGPYLSPRNNCMLTTPRRVLGDSRGLAGVGGAXXXXXXXNGSSLAXXXXXXXXGGESGEDEGEGFDLDEGLDNDPEEELAVLDQLIEWQRQTGEYGVAAK 1365
            RFLYDMF+NL+ADV+HRLEA+TTASFLEIYGEDVYDLLSDGHAPGTKR  + VLEDK GVFV+GLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTI LTQ++K++ADP G+PQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDDR +KK+ +VPYRQSKLTRLLQDALGGNSQTLF+ACVSPAADS+NETVAALHYANRARNIKN+V+KNTDGAKEE++RLRS AAALQ+ELV EHFRLG GG +      +  GEGGGDPEATGG AGLGL P+AQAEE+LGRE+VK YLK+  A+V +  RK Q  G PLL G G    D  V S G                                        G+  A        GG  G  EGE       L++DPEEELAVLDQLIEWQRQTGEYG AAK
Sbjct:  120 RFLYDMFMNLNADVAHRLEATTTASFLEIYGEDVYDLLSDGHAPGTKRASLPVLEDKTGVFVNGLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTITLTQTLKEEADPEGEPQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDDRSDKKTTHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSLNETVAALHYANRARNIKNRVIKNTDGAKEELKRLRSTAAALQLELVWEHFRLGGGGPNAPMAGAEGGGEGGGDPEATGGAAGLGLSPDAQAEEVLGREEVKNYLKVVKARVADLVRKRQTAGVPLLLGGGKGG-DGGVRSGG----------------------------------------GTEDA--------GGGVGPLEGEE------LEHDPEEELAVLDQLIEWQRQTGEYGDAAK 523
[Close]
BLAST of mRNA_H-paniculata_contig8150.16174.1 vs. uniprot
Match: A0A6H5KAV5_9PHAE (Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAV5_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 1.620e-136
Identity = 215/274 (78.47%), Postives = 232/274 (84.67%), Query Frame = 1 
Query:    1 RFLYDMFINLDADVSHRLEASTTASFLEIYGEDVYDLLSDGHAPGTKRM------------------------------------QVLEDKNGVFVSGLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTINLTQSIKDDADPNGDPQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDDRPEKKSGYVPYRQSKLTRLLQDALGGNSQTLFLACVSPAADSINETVAALHYANRARNIKNKVVKN 714
            RFLYDMF+NL+ADV+HRLEA+TTASFLEIYGEDVYDLLSDGHAPGTKR                                     QVLEDK GVFV+GLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTI LTQ++KD+ADP G+PQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDDR +KK+ +VPYRQSKLTRLLQDALGGNSQTLF+ACVSPAADS+NETVAALHYANRARNIKN+VV++
Sbjct:  120 RFLYDMFMNLNADVAHRLEATTTASFLEIYGEDVYDLLSDGHAPGTKRASLPASVGGEGCDPIVCGGVVKNYSNNNNENNCLAKHQVLEDKTGVFVNGLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTITLTQTLKDEADPEGEPQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDDRSDKKTTHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSLNETVAALHYANRARNIKNRVVRD 393
[Close]
BLAST of mRNA_H-paniculata_contig8150.16174.1 vs. uniprot
Match: A0A4D9D969_9STRA (Kinesin motor domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D969_9STRA)

HSP 1 Score: 285 bits (729), Expect = 1.610e-81
Identity = 182/347 (52.45%), Postives = 225/347 (64.84%), Query Frame = 1 
Query:    1 RFLYDMFINLDADVSHRLE------ASTTASFLEIYGEDVYDLLSDG-HAPGTKRMQVLEDKN-GVFVSGLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTINLTQSIKDDA------DPNG----------DPQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDDR---PEKKSGYVPYRQSKLTRLLQDALGGNSQTLFLACVSPAADSINETVAALHYANRARNIKNKVVKNTDGAKEEMRRLRSMAAALQMELVREHFRLGEGGCSITYRQTQRTGEGGGDPEATGGPAGLGLGPNAQAEEILGREDVKAYLK 960
            RF+ D+F++LD +   R +      A  +ASFLEIYGEDVYDLL D     G   + + ED N GV VSGL  + V   + AL VL +G LNRTTA+TLMN VSSRSHAVFT+ + Q +K D+      D  G          + Q V SKLTFVDLAGSERL RTGAEG+R+REGIQIN GLLALG+V+NAL D+      KK+ +VPYRQSKLTRLLQDALGGNSQTLFLACVSPAA + +ET++ L+YANRARNI+NK VKNTD  KEE+R LR  A  L+ E+VR  F       +        +G+GG +   T  P        +  E ++ R DVKA+L+
Sbjct:  122 RFVDDLFVHLDEEQRQRSQQQQARNAVVSASFLEIYGEDVYDLLDDSADGRGRPSLPIREDANAGVLVSGLKDMVVHSRDEALQVLRKGTLNRTTAATLMNVVSSRSHAVFTVTMQQILKPDSGSGDREDLGGLKDGAEEGEEEGQVVMSKLTFVDLAGSERLKRTGAEGERRREGIQINVGLLALGSVINALADEERLVKGKKAVHVPYRQSKLTRLLQDALGGNSQTLFLACVSPAAINASETLSTLYYANRARNIRNKPVKNTDSTKEELRCLRQTARFLKAEVVRRVFL-----ANPVDEVPVESGQGGTEKRCTS-PVTASKAHTSDVE-LMERSDVKAFLR 461
[Close]
BLAST of mRNA_H-paniculata_contig8150.16174.1 vs. uniprot
Match: A0A7S4J1K6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1K6_9STRA)

HSP 1 Score: 273 bits (698), Expect = 1.920e-77
Identity = 199/485 (41.03%), Postives = 263/485 (54.23%), Query Frame = 1 
Query:    1 RFLYDMFINLDA----------------DVSHRLEASTTASFLEIYGEDVYDLLSDGHAPGTKRMQVLEDKNG-VFVSGLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTINLTQSIKDDADPNGDPQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDDRPEKKSG--YVPYRQSKLTRLLQDALGGNSQTLFLACVSPAADSINETVAALHYANRARNIKNKVVKNTDGAKEEMRRLRSMAAALQMELVREHFRLGEGGCSITYRQTQRT-GEGGGDPEATGGPAGLGLGPNAQAEEILGREDVKAYLKLAKVTEASRKPQGHGAPL--LFGSGC--------ADTDASVASSGVGPYLSPRNNCMLTTPRRVLGDSRGLAGVGGAXXXXXXXNGSSLAXXXXXXXXGGESGEDEGEGFDLDEGLDNDPEEELAVLDQLIEWQRQTGEYGVAAK 1365
            RF+ D+F +L+                 D+ H +    +ASFLE+YGEDV+DLL +      K + + ED NG V V GL   PV   E AL+VL  G L+RTTA+TLMN  SSRSHAVF + L Q+ KD+    G   T +S+ TFVDLAGSER+ +TGAEG+R REGI+IN+GLLALGNV+NAL DD    K G  +VPYRQSKLTRLLQDALGGNSQTLFLACVSP+  + +ET++ LHYANRARNIKN   KN DG   EM+RL ++   LQ ELV+  F L E       R  + T G    D +  G             EE+L R DV+ Y+   K+ + + + +G G P   LF +           ++D S+A+S        R     T+ +R+         V          N + L                          ++ +P+E++A+LDQL+E Q Q  E+  A K
Sbjct:   25 RFMSDIFASLERRKTEDAAKSSGSEEGDDIPHLISFKLSASFLEVYGEDVHDLLDEDR----KALPLREDSNGGVVVVGLKNRPVQSAEDALNVLHVGTLHRTTAATLMNHQSSRSHAVFAVELQQTTKDNG---GVEVTTSSQFTFVDLAGSERMKKTGAEGERAREGIKINEGLLALGNVINALADDERLAKGGRVHVPYRQSKLTRLLQDALGGNSQTLFLACVSPSDTNASETLSTLHYANRARNIKNAPTKNVDGTLLEMQRLNALNHILQCELVKNRFLLPE-----KKRLVKETVGSEKPDHDQIG----------HADEELLKRRDVQEYMD--KIYQIADEKRGSGLPSKNLFTAELHGARKLTEVESDVSMATSSSNAAPITRPGTATTSKKRIY--------VNRTADMTANLNRTELDVSI----------------------MEVNPDEDMAILDQLLELQSQDHEFDKAEK 455
[Close]
BLAST of mRNA_H-paniculata_contig8150.16174.1 vs. uniprot
Match: B8BW53_THAPS (Kinesin-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW53_THAPS)

HSP 1 Score: 250 bits (638), Expect = 6.890e-76
Identity = 141/253 (55.73%), Postives = 181/253 (71.54%), Query Frame = 1 
Query:   52 LEASTTASFLEIYGEDVYDLLSDGHAPGTKRMQVLEDKNG-VFVSGLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTINLTQSIKDDADPNGDPQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDD----RPEKKSGYVPYRQSKLTRLLQDALGGNSQTLFLACVSPAADSINETVAALHYANRARNIKNKVVKNTDGAKEEMRRLRSMAAALQMELVREHF 795
            ++   +A+FLE+YGED++DLL +      K + + ED NG V V GL    V     AL+VL+ G +NRTTA+TLMN  SSRSHAVFT+NL Q ++      G   T TS+ TFVDLAGSER+ +TGAEG+R +EGI+IN+GLLALGNV+NAL D+    R EK   +VPYRQSKLTRLLQDALGGNSQTLFLACVSP+  + +ET++ L YANRARNIKN   +N D    E++RLRS+   L+ EL+++ F
Sbjct:  101 IDFKLSATFLEVYGEDIHDLLDEDR----KSLPIREDSNGEVIVVGLRSTQVSSDVEALNVLNTGTMNRTTAATLMNCTSSRSHAVFTVNLVQVVRG---AEGVDVTTTSRFTFVDLAGSERMKKTGAEGERAKEGIKINEGLLALGNVINALADEERLARGEKV--HVPYRQSKLTRLLQDALGGNSQTLFLACVSPSDTNASETLSTLQYANRARNIKNVPTRNVDATVLELQRLRSLTNVLKCELIKQRF 344
[Close]
BLAST of mRNA_H-paniculata_contig8150.16174.1 vs. uniprot
Match: B8BQ46_THAPS (Kinesin-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQ46_THAPS)

HSP 1 Score: 244 bits (624), Expect = 7.500e-74
Identity = 137/236 (58.05%), Postives = 173/236 (73.31%), Query Frame = 1 
Query:    1 RFLYDMFINLDADVSHRLEASTTASFLEIYGEDVYDLLSDGHAPGTKRMQVLEDKNG-VFVSGLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTINLTQSIKDDADPNGDPQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDDRPEKKSG--YVPYRQSKLTRLLQDALGGNSQTLFLACVSPAADSINETVAALHYANRARNIKN 699
            RF+ D+F  L    S  ++   +ASFLE+YGE ++DLL +      + +++ ED  G VFV GLS VPV+    A+ +L+ G +NRTTA+TLMN  SSRSHAVFTINL Q+ +      G   T TS+LTFVDLAGSER+ +TGAEG+R REGI+IN+GLLALGNV+NALGD+    K    +VPYRQSKLTRLLQDALGGNSQTLFLACVSP+  + +ET++ L YANRARNI+N
Sbjct:  113 RFVADIFTMLGERNSSLVDYKVSASFLEVYGEAIHDLLDEDR----QSLKLREDSKGEVFVVGLSTVPVINDAEAMGILNTGTMNRTTAATLMNCTSSRSHAVFTINLQQTTRGS---EGVDITTTSRLTFVDLAGSERMKKTGAEGERMREGIKINEGLLALGNVINALGDEERLAKGEKVHVPYRQSKLTRLLQDALGGNSQTLFLACVSPSDTNASETISTLQYANRARNIRN 341
[Close]
BLAST of mRNA_H-paniculata_contig8150.16174.1 vs. uniprot
Match: A0A448Z507_9STRA (Kinesin motor domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z507_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.050e-73
Identity = 192/471 (40.76%), Postives = 249/471 (52.87%), Query Frame = 1 
Query:    1 RFLYDMFINLDADVSHR----------LEASTTASFLEIYGEDVYDLLSDGHAPGTKRMQVLED-KNGVFVSGLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTINLTQSIKDDADPNGDPQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDDRPEKKSG--YVPYRQSKLTRLLQDALGGNSQTLFLACVSPAADSINETVAALHYANRARNIKNKVVKNTDGAKEEMRRLRSMAAALQMELVREHFRLGEGGCSITYRQTQRTGEGGGDPEATGGPAGLGLGPNAQAEEILGREDVKAYLK-LAKVTEASRKPQG--HGAPLLFGSGCADTDASVASSGVGPYLSPRNNCMLTTPRRVLGDSRGLAGVGGAXXXXXXXNGSSLAXXXXXXXXGGESGEDEGEGFDLDEGLDNDPEEELAVLDQLIEWQRQTGEYGVAAK 1365
            RF+ D F N+    +            L+ +  ASFLE+YGEDVYDLL          + + ED K G+ V GL+   +     AL+VL +G +NRTTA+TLMN  SSRSHAVFTI ++Q  +     +    T TS+ TFVDLAGSER+ +TGAEG+R REGI+IN+GLLALGNV+NAL DD   KK    +VPYRQSKLTRLLQDALGGNSQTLFLACVSP+  + +ET++ L+YANRARNI+N   KN DGA  E+ RL+++   LQ+ELV+  F  G  G S+      +                         E +L REDV+ Y++ +  V +A   P       PLL        D S  S                T R +   +RG      A       NGSS                   E FD     D +P+EE+A+LD L+E Q+   EY  + K
Sbjct:  117 RFITDFFGNMQRKKAESDKCIEGCPVLLDYTLKASFLEVYGEDVYDLLDSTR----NSLPLREDSKGGIVVVGLTSRSISTTAEALEVLHEGTMNRTTAATLMNHTSSRSHAVFTIQMSQVTRRGNSGDSADMTTTSQFTFVDLAGSERMKKTGAEGERAREGIKINEGLLALGNVINALADDDQVKKDKKVHVPYRQSKLTRLLQDALGGNSQTLFLACVSPSHTNASETLSTLNYANRARNIRNAPTKNVDGASAELNRLQNINRVLQLELVKSRFTAG--GASVASSDIGKI-----------------------DESLLKREDVETYMQQVYDVADAMMSPSKTLRSPPLLI------XDVSSKSP---------------TXRDLSVMNRGGHNDXMANQKSKSHNGSS-------------------EKFDHSILEDINPDEEIAILDYLLELQQHDHEYEKSKK 518
[Close]
BLAST of mRNA_H-paniculata_contig8150.16174.1 vs. uniprot
Match: A0A1V9ZYW5_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYW5_9STRA)

HSP 1 Score: 243 bits (620), Expect = 3.120e-72
Identity = 146/275 (53.09%), Postives = 186/275 (67.64%), Query Frame = 1 
Query:    1 RFLYDMFINLDADVSHRLEASTTASFLEIYGEDVYDLL---SDGHAPGTKRMQVLEDKNGVFVSGLSQV----PVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTINLTQSIKDDADPNG----DPQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDDRPEKKSG--YVPYRQSKLTRLLQDALGGNSQTLFLACVSPAADSINETVAALHYANRARNIKNKVVKNTDGAKEEMRRLRSMAAALQMELVR 786
            R ++++F  + AD     EA  + SFLEIYGED++DLL   ++      + + + +D++GVFV G  +V     V   E AL+ L  G L R T ST MN VSSRSHAVFT+ L Q +K +A  N     D  T  SKLTFVDLAGSERL +T A+GQR +EGIQIN GLLALGNV+NALGD+  +K++   +VPYR SKLTRLLQDALGGNS+TLF+ACVSPA+ +  E++  L YANRARNI+NK VKN D    E+  L +  A LQ ELV+
Sbjct:   46 RMIHELFEKILADD----EAHVSVSFLEIYGEDIHDLLLPLTNSKKALKQTLHLRQDRSGVFVQGAREVFYMVTVRNPEEALEQLRVGCLTRITGSTEMNDVSSRSHAVFTLTLVQKMKREASDNKKGFVDTMTTISKLTFVDLAGSERLKKTMADGQRMKEGIQINVGLLALGNVINALGDESNQKRNDTTFVPYRSSKLTRLLQDALGGNSRTLFVACVSPASSNAAESLNTLQYANRARNIQNKAVKNLDPRSAELTSLHAYIAILQRELVK 316
[Close]
BLAST of mRNA_H-paniculata_contig8150.16174.1 vs. uniprot
Match: A0A7S2M4X3_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M4X3_9STRA)

HSP 1 Score: 247 bits (631), Expect = 3.220e-72
Identity = 165/356 (46.35%), Postives = 212/356 (59.55%), Query Frame = 1 
Query:   43 SHRLEASTTASFLEIYGEDVYDLLSDGHAPGTKRMQVLEDKNGVFVSGLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTINLTQSIKDDADPNGDPQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDD----RPEKKSGYVPYRQSKLTRLLQDALGGNSQTLFLACVSPAADSINETVAALHYANRARNIKNKVVKNTDGAKEEMRRLRSMAAALQMELVREHFRLGEGGCSITYRQTQRTGEGGGDPEATGGPAGLGLGPNAQAEEILGREDVKAYLKLA--KVTEASRKPQGHGAPLLFGSGCADTDASVASSGVGPYLSPRN 1092
            S  ++   +ASFLE+YGED+YDLL D      K  +    +  V V GL    +L    A++VLS G +NRTTASTLMN  SSRSHAVF +NL Q+ +      G   T TS+ TFVDLAGSER+ +TGAEG+R +EGI+IN+GLLALGNV+NAL D+    R EK   +VPYRQ+KLTRLLQDALGGNSQTLFLACVSP+  + +ET++ L YANRARNIKN   +N D    E++RL +M   L+ ELVR+ F            + QRT +  G+                  +E+L REDV AYL L   KV +    P     P L     +D     A + + P ++P N
Sbjct:  156 SSLVDFQVSASFLEVYGEDIYDLLVDESRTPLKLREGTNKE--VVVKGLRNKSILNAAEAMNVLSTGTMNRTTASTLMNRTSSRSHAVFMLNLRQTTRS---AEGVDVTSTSRFTFVDLAGSERMKKTGAEGERAKEGIKINEGLLALGNVINALADEDRIARGEKV--HVPYRQTKLTRLLQDALGGNSQTLFLACVSPSDTNASETLSTLQYANRARNIKNAPTRNVDETAVELQRLHAMNNLLKRELVRQRF----------GPEMQRTNKEIGNIN----------------DELLLREDVAAYLNLVDEKVCDFGNVPN---LPTL----ASDFRPHSAPASIRPVIAPVN 471
[Close]
BLAST of mRNA_H-paniculata_contig8150.16174.1 vs. uniprot
Match: A0A7S2QVI8_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVI8_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.990e-71
Identity = 187/452 (41.37%), Postives = 243/452 (53.76%), Query Frame = 1 
Query:   61 STTASFLEIYGEDVYDLLSDGHAPGTKRMQVLEDKNGVFVSGLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTINLTQ----SIKDDADPNG-DP--------QTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQINQGLLALGNVVNALGDDRPEKK-----SGYVPYRQSKLTRLLQDALGGNSQTLFLACVSPAADSINETVAALHYANRARNIKNKVVKNTDGAKEEMRRLRSMAAALQMELVREHFRLGEGGCSITYRQTQRTGEGGGDPEATGGPAGLGLGPNAQAEEILGREDVKAYLKLAKVTEASRKPQGHG---APLLFGSGCADTDASVASSGVGPYLSPRNNCMLTTPRRVLGDSRGLAGVGGAXXXXXXXNGSSLAXXXXXXXXGGESGEDEGEGFDLDEGLDND-PEEELAVLDQLIEWQRQTGEY 1350
            + TASFLE+YGED++DLL+  H      + + ED NGV V GLS   +   E AL VL +G ++RTTA+TLMN  SSRSHAVFT+ LT+    +I + +DP+  DP        +T  SKLTFVDLAGSER+ +TGAEG R +EGIQIN GLLALGNV+NALGD +         S +VPYRQSKLTRLLQDALGGNSQT+FLACVSP   +I E+++ L YANRARNIKNK +KN D    E+ RL ++   L+MEL+R  F        +  +Q  +                  L   ++ ++   RE+VK YLK  +V E +    G G   A L+FG         VA +   P  S R+            D     G                                     DLD  L N  P+E++A+LDQL+E Q+   +Y
Sbjct:  174 TVTASFLEVYGEDIHDLLALNHN-NPPSLPIREDSNGVTVVGLSSKVIRSAEEALSVLQKGTMHRTTAATLMNKHSSRSHAVFTVTLTKELVTNIPNISDPSAADPTAPGASSTRTTVSKLTFVDLAGSERMKKTGAEGDRMKEGIQINVGLLALGNVINALGDTQVNASVEGSISRHVPYRQSKLTRLLQDALGGNSQTVFLACVSPLESNIGESLSTLKYANRARNIKNKPIKNIDPTVLELGRLEALGHGLRMELLRLKF------FELKGQQIPK----------------FLLTSGSEDDDFFKREEVKTYLK--EVEEKAMSEFGKGLRSAGLMFGKSDGSNFLPVAFNIGQPLDSFRS------------DKLSFKG-------------------------------------DLDAALINSSPDEDMAILDQLLELQQGENDY 551
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8150.16174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDY4_ECTSI4.450e-18370.37Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KAV5_9PHAE1.620e-13678.47Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A4D9D969_9STRA1.610e-8152.45Kinesin motor domain-containing protein n=2 Tax=Mo... [more]
A0A7S4J1K6_9STRA1.920e-7741.03Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
B8BW53_THAPS6.890e-7655.73Kinesin-like protein (Fragment) n=1 Tax=Thalassios... [more]
B8BQ46_THAPS7.500e-7458.05Kinesin-like protein (Fragment) n=1 Tax=Thalassios... [more]
A0A448Z507_9STRA1.050e-7340.76Kinesin motor domain-containing protein n=1 Tax=Ps... [more]
A0A1V9ZYW5_9STRA3.120e-7253.09Kinesin-like protein (Fragment) n=1 Tax=Thraustoth... [more]
A0A7S2M4X3_9STRA3.220e-7246.35Kinesin-like protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2QVI8_9STRA1.990e-7141.37Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8150contigH-paniculata_contig8150:1511..10218 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score560.5
Seed ortholog evalue7.4e-157
Seed eggNOG ortholog2880.D8LDY4
KEGG koko:K10395
Hectar predicted targeting categoryother localisation
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG0244@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-23_003320.1
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Exons10
Model size1368
Cds size1353
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931021.6384113-UTR-H-paniculata_contig8150:1510..15251622931021.6384113-UTR-H-paniculata_contig8150:1510..1525Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8150 1511..1525 +
1691481554.4342022-UTR-H-paniculata_contig8150:1510..15251691481554.4342022-UTR-H-paniculata_contig8150:1510..1525Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8150 1511..1525 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931021.6557279-CDS-H-paniculata_contig8150:1525..16541622931021.6557279-CDS-H-paniculata_contig8150:1525..1654Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 1526..1654 +
1691481554.4495778-CDS-H-paniculata_contig8150:1525..16541691481554.4495778-CDS-H-paniculata_contig8150:1525..1654Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 1526..1654 +
1622931021.6725876-CDS-H-paniculata_contig8150:2905..31271622931021.6725876-CDS-H-paniculata_contig8150:2905..3127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 2906..3127 +
1691481554.4614968-CDS-H-paniculata_contig8150:2905..31271691481554.4614968-CDS-H-paniculata_contig8150:2905..3127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 2906..3127 +
1622931021.7232227-CDS-H-paniculata_contig8150:3974..40791622931021.7232227-CDS-H-paniculata_contig8150:3974..4079Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 3975..4079 +
1691481554.4735842-CDS-H-paniculata_contig8150:3974..40791691481554.4735842-CDS-H-paniculata_contig8150:3974..4079Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 3975..4079 +
1622931021.74913-CDS-H-paniculata_contig8150:4598..47061622931021.74913-CDS-H-paniculata_contig8150:4598..4706Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 4599..4706 +
1691481554.487934-CDS-H-paniculata_contig8150:4598..47061691481554.487934-CDS-H-paniculata_contig8150:4598..4706Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 4599..4706 +
1622931021.7623472-CDS-H-paniculata_contig8150:4842..49681622931021.7623472-CDS-H-paniculata_contig8150:4842..4968Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 4843..4968 +
1691481554.49963-CDS-H-paniculata_contig8150:4842..49681691481554.49963-CDS-H-paniculata_contig8150:4842..4968Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 4843..4968 +
1622931021.780682-CDS-H-paniculata_contig8150:5519..56261622931021.780682-CDS-H-paniculata_contig8150:5519..5626Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 5520..5626 +
1691481554.5105221-CDS-H-paniculata_contig8150:5519..56261691481554.5105221-CDS-H-paniculata_contig8150:5519..5626Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 5520..5626 +
1622931021.7961698-CDS-H-paniculata_contig8150:5915..59611622931021.7961698-CDS-H-paniculata_contig8150:5915..5961Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 5916..5961 +
1691481554.5220194-CDS-H-paniculata_contig8150:5915..59611691481554.5220194-CDS-H-paniculata_contig8150:5915..5961Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 5916..5961 +
1622931021.813409-CDS-H-paniculata_contig8150:6792..68971622931021.813409-CDS-H-paniculata_contig8150:6792..6897Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 6793..6897 +
1691481554.5481615-CDS-H-paniculata_contig8150:6792..68971691481554.5481615-CDS-H-paniculata_contig8150:6792..6897Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 6793..6897 +
1622931021.8252409-CDS-H-paniculata_contig8150:9211..95201622931021.8252409-CDS-H-paniculata_contig8150:9211..9520Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 9212..9520 +
1691481554.5666547-CDS-H-paniculata_contig8150:9211..95201691481554.5666547-CDS-H-paniculata_contig8150:9211..9520Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 9212..9520 +
1622931021.8396275-CDS-H-paniculata_contig8150:10122..102181622931021.8396275-CDS-H-paniculata_contig8150:10122..10218Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 10123..10218 +
1691481554.5802624-CDS-H-paniculata_contig8150:10122..102181691481554.5802624-CDS-H-paniculata_contig8150:10122..10218Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8150 10123..10218 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8150.16174.1prot_H-paniculata_contig8150.16174.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8150 1526..10218 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8150.16174.1

>prot_H-paniculata_contig8150.16174.1 ID=prot_H-paniculata_contig8150.16174.1|Name=mRNA_H-paniculata_contig8150.16174.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=451bp
MFINLDADVSHRLEASTTASFLEIYGEDVYDLLSDGHAPGTKRMQVLEDK
NGVFVSGLSQVPVLGWEAALDVLSQGVLNRTTASTLMNTVSSRSHAVFTI
NLTQSIKDDADPNGDPQTVTSKLTFVDLAGSERLGRTGAEGQRKREGIQI
NQGLLALGNVVNALGDDRPEKKSGYVPYRQSKLTRLLQDALGGNSQTLFL
ACVSPAADSINETVAALHYANRARNIKNKVVKNTDGAKEEMRRLRSMAAA
LQMELVREHFRLGEGGCSITYRQTQRTGEGGGDPEATGGPAGLGLGPNAQ
AEEILGREDVKAYLKLAKVTEASRKPQGHGAPLLFGSGCADTDASVASSG
VGPYLSPRNNCMLTTPRRVLGDSRGLAGVGGAGAAGGAGNGSSLAGGAGT
GRAGGESGEDEGEGFDLDEGLDNDPEEELAVLDQLIEWQRQTGEYGVAAK
*
back to top

mRNA from alignment at H-paniculata_contig8150:1511..10218+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8150.16174.1 ID=mRNA_H-paniculata_contig8150.16174.1|Name=mRNA_H-paniculata_contig8150.16174.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8708bp|location=Sequence derived from alignment at H-paniculata_contig8150:1511..10218+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTTCCTGTACGATATGTTTATCAACTTGGACGCCGACGTGTCGCACCG
CCTGGAGGCGAGCACGACGGCTAGCTTCCTCGAGATTTACGGCGAAGATG
TGTATGATCTCCTTAGCGACGGGCACGCCCCGGGCACCAAGCGCGTGTCG
CTTCAGGCGAGGGAGAATGCGATGGAAATTTTTATGCGATCCCTACTTTT
TTTTTTGTGTGTTGTTTTGGGTTTGTGAGATCGAGACCACAGGGTCCTTA
CCTAAATGAACCACATGAATGTACAATGCCTTTGACATTTTTACAACCTT
CCGCTGTGGAGACACTCGGTCCAGTAGCAGCACAGATAGCATAGTTAGCA
TTGAGTTAGTTGGCTTGGTTTTGCGCTCAAAGACTCGGCCGCAGCACTGG
ATACTTTTATATCGGGTTTATTTACTGCTCCGATATAACTTCCGGCGCCT
CAAAGAGTTTACTCCTAGCGCGCCACTTGATCGTAATCCGTGTGTGGTCG
TTACTCATGTTTGCATTTTTTTTCGAAGATTTTCGATTCATATAGATGTA
CCCCCTCTGTCCAACAAGTTTGTGGAACGTTCTTTCGGCGGATATGGCGC
ACGCACTTTTGAAATGTGTTGACTGATGGTGAGATTGGCTGAAAGCTGGG
ACCCTCAGCATTCACGTAAGCTATGCCGGATGTTGGTCAGATGTGTAGTT
GGGGATTCACCAAGACTCAAAGCTTGGCCTTTTTCTGTATTTCGGTTATT
TTATCGCTAAACCTCTACGGTCAATTGAATCAGATTTTTCAAATTCAGCA
TACTGTTTTTCGGGGTCTACCGCGGTTCACGAGCTGTGAGTGGCATCGAT
CGAAAGTTGGGAGCTTACACGTTCATATGAGCCATGCACTGTTTGCTTGG
ATGTGTATTCGGCTTGAACGGTAGCGTCAAAATTGGGACAGTTTGCTTCA
ATTTCGGCATCGAGTTGCATGCTTCAGCTCAGGACCTACGAAGATCCACT
GATCGCGGACGGGCTTCCTAGAACGTTGAGACTTCGTGCCTTCATATGAA
CCATTTCCATGTTCTGTTTGGAGGCATGGTCGTGGACTTGTGCGAACGCA
ATATGCAGCCATTTGACATTTTTCATTTTGTCGCATGCTTTTTCATACAT
TGTCGCCGTATTTCGCGCGTTTAATGACGGAGAGGCCAATAGTTTACACG
ATCGCCCCAGACCCCGAAACACCAGGGAATCCAACACAAGCAATCGTTTA
TTGGATGCATGTTTCCTACAAAAATTATCTTCCCAATTTCACAGACGTTT
TGGACAGAGGCTCTTGCTGTTGATATCCTAATCGAGTTGCGCGTTAGGGC
TAAAGCGTATGCGTTTCTTTTTCATTCTCCATATCTTTTTGGGAGATGCA
GGTGCTCGAGGACAAGAACGGAGTGTTCGTGAGTGGGCTAAGTCAAGTTC
CCGTACTGGGCTGGGAGGCAGCGCTGGATGTACTCAGCCAGGGCGTCCTC
AACCGAACCACCGCGTCTACCCTGATGAACACGGTCAGCAGTCGCTCCCA
CGCGGTGTTTACCATCAATCTCACCCAGAGTATCAAAGATGACGCTGATC
CAAACGGCGACCCTCAGGTACGTTCGTGTATATGTGCGCGCGTATATGTG
TGTTGATCTCTTCCGCCGTCATGTTCATTGTTCAAACGTTTAGTCAGGCG
TTGGTGCAAGGTATATCGATCGCATTATGAAAAAGGAACCATTCAGGAAT
CGGCGTCGTAACGTCCGAAGAATAGATTTCCCAGCGATCACTGAGGATAA
TGACGAATACATGAGTCAACAGACAGACTGCGTTATCAGCTCAGCTCTGG
ACAGTTGGTAAGGGGATGCCAGGTGCAAAACAAACGGAGTCGTTTCTTTT
TGCTGTTTGTGCCTCTTATCTTGGTCCGAGTGTAGTCGAGCGAAAATGAG
CAAACACGCTACTTGTTTTGTGACGGCCAAGTAATAAACGAGTCCGGCAC
AGCTGATTAAGGGTCAGAGGCTCCTCGAAGCTTGAACGCTAATGTTCTAT
TTATGAGTGCGTTAACTTCAATTTTATTTATAGGGGGTTGGTTGCCTGTT
TTTCGTTTGTCAATCATACCTTGTAGTATTTGGTTTGGTTAAAAAAAAAA
ATGTTTTTGTGTTTGTATTTATTTGGATTAGAGGTATTTTACCGCGTTAT
CGTCATTTGATGAATTTAGGCAGGAAGCGCTTTTTGGCTTTATCTTTGTA
TTTTCTTTTTTTTATTGTTGGGTTTGATGCCTTGATCTATCTGCTCGACG
CGTACTCATAGCTGTGCGTCCACCCAATCTGTCAGTCAGCCGGCTAGGCC
CGTCAGTCAAATCATCATTTTTCCCCCGTGACTCATCCACACGTTCATGT
TACTTGATGATTACTCTTGTATATCCCCTGCGTTTCCATACACCCACACG
CACACGAAACATAGACGGTTACATCGAAACTAACTTTCGTGGATCTTGCT
GGAAGCGAGCGACTCGGCAGGACTGGCGCGGAGGGTCAGCGGAAACGCGA
AGGAATTCAGATTAACCAGGTAGGGCGCTGTGCTGTTGGGTACTCTACTG
TACTGTAGCATGATATTGTGCGATGAACTTGACTATGACGGGTTGGTTCT
AACATGATACGCTTGAATTTGCCGGTCATCCCTCGTGTATCCTATCCTGT
GCTGTACTTCGCTGGGTTAAGTTTACGTGTATAATCCTTGATAGTTTGGA
CCAAACGAAATGTTGATGTTGACACTCGGAATCACACCGCATCACGGAAC
GTCAGATCGCAACACGTCAATTATTTTCTTAGTATCGAGCATCGTGCTAA
AATCAGCCGCACGCTCCATTGCTACCGGCCTCTACCGTTCACCAAATTGT
TCCTGGGCGGATTTCTTCGTCGTCGAAATGCTCGCATTGTCCACCGCGTG
TATCGTATACAGCTTGGATCGCAATTGAATCAGCACACTTGTGGCGTCCC
AGTGTGTCCTCAGAAGACAAGATGGTTGTATTGTTTTTGCCCTCACACGT
GTGTGCTCATGTGCTCGAACACGCTTGCGTTCCTTCAGGGACTGCTGGCT
CTGGGCAACGTGGTGAATGCTCTGGGAGATGACCGGCCCGAAAAGAAGAG
TGGTTATGTACCGTACCGGCAATCGAAACTCACCAGGCTACTGCAGGTAC
TTCCTCTGTGCCATAAGTATAGTCGGTCGATTTTATAGAGGCACTATACT
AATCCCCTATTCAATCGGAGTGGATGATGCCTGATGTGTGTTTCGTTGTT
TGTTTTCACCCTCTCTGCATTCGTACACTCAGGACGCGCTGGGAGGCAAT
TCTCAGACACTGTTCCTGGCGTGCGTGAGTCCCGCGGCAGATTCGATCAA
CGAGACGGTCGCCGCCTTACACTACGCCAATCGCGCGCGCAATATCAAGA
ACAAAGTGGTGAGAGGTTGATGTCAACTAGTGAATCAGATCGCTGGCGCG
TATCTTACGATAGTTTAGATGGATCTACTTGTGGACAGATGTAGAAAACG
ACACCACACGGTAGGCACCGTAGGCCGCAGTTTTGTACCAAGATTTCAGA
TGTTCGAATAGTGTCGGCGTTTTTTGTTCCTTTTTTTTTTTTAGTTAGTT
TCAGGGTTGCCTCGAAAGGACGTCATGAACCGGTTTGCGCCCAGTTATTT
GAGAACTTGCCAGCCATGTGAAAACCAGCCCTGGTATATATACTCAGGTA
TTTGTTGAACAATTTCGGCTATGAGTTATATGGACATGTGCCCATCAAAT
CGAAACCCACACTGGATAAATATACCGCACGTGCAAACTGAAAGTTTACT
CTGACTGGGTAGGTGGGGTAAACATGCAAATACCTTAATTCTACCAATCA
AAGAGTATCAAAGCCGACATCGCCATGCGAATGGTTGATAGTTATAGCTT
CCACCCTATGGTACATTGGGCAGCTGAGCGAGCACACTTTTTTTTTTTTT
TTTATCCAGGTAAAGAACACGGACGGAGCGAAGGAGGAGATGAGGAGACT
ACGCTCCATGGCCGCCGCGCTCCAAATGGAGCTCGTTCGCGAGCATTTCC
GTCTCGGAGAGGGAGGGTGAGGGCATGGATCTGTCGAAGTGTAAAAAATT
GGACCTATTTACCCAAATGTATTTCAGATTTGTGACTACTAGAGCGTCGC
AAATTTTCGATTTTGGAATAGCTTAGTCAAAGGATAGTACAGGAGCGGAC
GGGCCGGCGGGCGAGGGGTGGAGAGCTATAGAGTCGTTATATAGTAAAAC
ATAAGTCAAGAAATGAATCAACAAGTAGCTAAAGATCAAATTATGAAATA
TAGAAACACGATAATAACCGTAAAATGAAAAGGAGATGTATTCAGAATTT
TCAAGATGCTCAATCACTTATCGACAAACTCAACGCACTGGGGAGGGGGG
GGTAATTCCGTGTCGCACCGATCTTCATTTGACTGTAATGTCGGTATTCC
TCTGAAAACAAAAAGAAGTAATGCCCATGTCATTATTGCAGGGATACGAA
GCCGCGTGAAATTGGCAAGAAGTCGAGGACACACAAGCCGAAATATTTGA
CTGTTAGATATGAGTGCTTCCTCTCCTCCTCCATCCCTCCCCCCCCCGCG
CGCCTTCTTTTACAGTTTGCTTTTTCTGATGACAATCACATTACTATCTG
ATGACTAAATACTAAGCACAATATCAACGTGACTAGTGTTTTTATGTGTC
CTAGAATCCCAGACAATCTGACAAACTGTCGTGTCGTTTTCGTTTTTCAG
GTTTCAAAGTATCGCACGTGCTTTCTAATTTGTTTTGTACAGATGGTAAT
CGATACGAATCCCTCCCGCCCTTTTGCTTCGGTGACTATGGGGTATGTAA
CGTCAGCGTGTGATGCACTTGTTGTGTGGAAACAGTCCTGACGTTCGTGA
CGTTCCTTGGCCCTAGTCCCCTGCACAACAACCACTGGCGTTTTGTCACA
TTGTCGGAACAGATTTCCCATCAGCTGCTTTCCGTTGTAAATGATAACCG
GTTCATCAGCTACAGAGTAGAAGCCAAGTGTGCGATTTGCGCTCTGTCCC
AAAACTTGAAAAGCACACCCCGGAGAAGGTTGTGTACCCTAGAGAGGTGG
TCTCTCCTGGGAGCAAGCATCGTCTTCTCGTTTGCAAACTGCTTAGTGGT
ATATACATGTTGATTGCTCAGCTTTCCCCCCTTCTCGTATTTATATATTT
GGGGATTCAGGGTTAGCGCAGAGGCAGCGGAGGGAGATCCGGAGGCCACC
GGCGGACCTGCAGGACTTGGTTTAGGGCCGAACGCTCAAGCAGAGGAAAT
TTTGGGGAGGGAAGATGTCAAGGCTTATCTCAAGTTGGTGCAGGCGAGTT
AGGAGTTTTTGTCGCCATGAGCCTATCGATTGCTGCCTGTGCGCTGTTTT
GGGGATTGCGTGTTTGTTGGTGCCTTGCACTCATGGCGAAATAACGCCTG
CATCAGCCCTAACCTTGAACCCGAATCCGTGGATCGTAGAGTGTGTTGGG
GTTGTAATGCTTTTATTATGGGCAAATGAACTGAACATGGACGTGTATGA
TGTGTATACCTAGCACGTTTGTTTAGGTAATGGGAACGTACGTGTACATG
ATTGTATACTCTGTATATTCCGCGCTTACTGGGCGTGTGATTGATTGGGC
AAAGACACATGTACATCGTGTACCTGATTGTGTCCATTTTTACCCACAGG
ATCTATAAGCTACTCGGTGGCCTTTCAGTGCTTTTCATGGAAGTTGTACC
CGATCCTGCTACTTTACCAGATGGAAGATGGAAGATTTCAGTTTCACTTT
TGCGGACCCCGACTCGGCCTGATTGTGTTCACTTTTACCCAGAGGATGAC
CACCCTGTCACCAACACAATTGGGATTCCGGATTCAGAGAATATTAGCGT
GCGTTGGCAGGAGAGCGTACAGCCGAAGGAGCTGCGTTTGGCAGAGTATT
GAACTTGAACTCCTTGGGGACGGGGTACTTTTTGAGAGATCCTTGAAGAA
TTTCGATCTGATCTGTGTTGAAAATAAGCAGATGTACATCCAGAGAGAGG
AGTACCCAAGAGCAGATCTGGGTGTGCCCAAGAATAGAGGTGGATGGGTT
ACATCCCGAGGTTCTGGTATAACGTATTCTTTGTTAGGAACAGATCTCAG
AGGGCTGCGGCCCGAAAGAGTTGATGCGTTGGCAGATGGAAGACAGTCTT
GCAGTTAAGTTAGGTCGTTGGGTACTTTTAACCTGCTTGTGCCCGAAAAG
TGACAAATTGACAAGGTGAAGTAAATGTATATAAATGTACAGATCTCCCT
CCTCGTCTCGGTTACCCTTTCAAGAAGATAGCCGACGATCTGTAAATATA
TATTTTACTTCGTTTGGTAAGTGAAGGAACGTAGGTTTGACGCGCCACAT
CTCCAGCTTTACGGTGATTCACATGGAGCTTGTAGTATCGATTGAAAGAG
AATTCTGCACAACTTCGACTTAGAGACGACCAAGAATACTAAATATTTTC
GTGAAAATTCGGAACAAGAAAAGAGCCAAAATCACTCACATCTAGGCCAT
TTTTGAAATTTCCGGCCACTTTTTGGAGGCGCAACACAAGCACGCGACCT
TACCACGCCGCAGAGGCAAGGAGTTGCCTCTCGGCAGAAGGTGTGAGCTT
GCAATCGACATCCCGATGTTATTTAAGCCTATTCTCTCGAAAACCCGGCG
GTGAGCCGGCACGACTCTGTGCAAACAAACTATGGTCGCGGCCCAACGTG
TCTGTCTCTTTTTACCTGAAAATGCACATTTTTGGGGTGATACCTGGGCC
ATGTTCTTTTTTTCTTTTTTAGCCACTCTCGCACGCCGTGGACTTGACGG
ATTGCCGTGAAAATTGGAGCCCAACCCAAAAAACGTGAAGAATTTTAAGT
CTGCAAAAAAGACAAAAACACGGACACAATTATTGTCTCACAAATCTATG
TTCCTTTTCTTACTGAACGGACGAGGTATACATATATATATATATATTTC
CCAGCTCAACCTTCTGACGTCTTGATATGAAATGAGAGGAAAAGGTTTAA
CCTTCTGGCCGTGACAACAAATCAGTATTGAGGGTCATGACTCCTGAATA
TAGAAAATGTAGATACTAGGAGCATTTGAGTAATGATAGACTAGAATAAA
GCCACAGGCTACGCCTGTGCAGGTTATGCGTATCCTCGACCCATGGACTC
GGTGTGCTCGCCGTGGGTACTTGCTCAGTGTAGCGAATAGCACGTCTCGT
TGCGAACGCAGTGGCTCGCTACGCTCGCTTGATGATTCGCTTTTCATGAT
ATACTCGAAGGTAACATCGAGAAACTGTTCCGAAATGATGAACAAGACGA
CCACGACTCCTACGCTAGCTACTCTTTTAAGAAACAAGGATACGCAAATT
TTTGTAATTGAATTGATTTTTGTAAATAGAGAACTACCATATCCGCAAAT
ACTGTTGCTACAATACCGTACCTAAACCATTTTTTTGCCAATGCCTGTAG
CTGCGGGACACTCGGCTCTTTTCATGTACGAAATACAACCACCGTAGTAG
CTCCGTGATACTGTACCCTCTCCTCCTCCCGCCCCCTCCCGCCTTTATCT
CGTCTAAATCACTCTTCCATCGCCGCTCGCCATCGCCGCCCAATCAAACA
GGCGAAGGTAACCGAGGCCTCCCGCAAGCCCCAGGGACATGGCGCACCTC
TACTGTTCGGATCCGGTTGCGCCGACACCGACGCCTCCGTCGCATCCTCG
GGGGTAGGGCCTTATCTGTCCCCGCGGAATAACTGCATGCTTACCACCCC
ACGTAGGGTGCTGGGCGATAGTCGAGGGCTGGCCGGGGTAGGTGGGGCGG
GGGCGGCAGGGGGGGCGGGCAATGGGTCGAGTTTGGCTGGGGGGGCGGGG
ACGGGGCGGGCGGGGGGGGAGAGCGGGGAGGATGAAGGGGAAGGCTTTGA
TCTGGATGAGGTGTGTGGGTGCTTGTGTGGAGAGCGCGTGTTGTAGGTTG
ACAAGCCTAGAGGCCTCGCTTGTAGTCCCGTGATGATGGAAGGAGACTAT
ACTACCAGCTAGTGTGACGTAATACCTGTGTAGGGTAACTCCGCTTATTG
ATTCAGGGGATTTTTTTTTTGGGGGGGGATTTTGACCTGTTGAATGCGTT
GTGGGTGCAATACATGAAACGTTAAGCATCACGTGCCATCCGTCATGTGA
CTACATTGACCGTGTGTGTTGTGTTTTCCCGGAACCCAAATCATGAACTT
TTTTCTTTCTTTCTTGGATGTACACGAAGGAAAATAAATCCTCTCACTGC
TCTTTTTGTCTAGATTTTGGTTTATACAATTCAGGTAAGGTGGCGTACTT
GCATTGACTCGTTTTCTTGTCCTTTTGAACCTTTTTTTCTTTTTTTTCTC
TCTTGCTAGCTTGCTCGCTTGCACATTTTTTCAGCTGTGAGACAGATGCA
TCCCGCTGTCTTGCTTTCTTTTTATTTTCCCACACGCATGTATCCATGGA
TATATGATAGCGTGTGTGTATATATATGTGTGTGTACACGCTTGGGATTG
TTACTGGGACAGGGTTTGGATAATGACCCCGAGGAGGAACTGGCGGTGCT
AGACCAGCTCATCGAGTGGCAGCGGCAGACTGGAGAATATGGAGTTGCTG
CCAAGTGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig8150:1511..10218+

>mRNA_H-paniculata_contig8150.16174.1 ID=mRNA_H-paniculata_contig8150.16174.1|Name=mRNA_H-paniculata_contig8150.16174.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2706bp|location=Sequence derived from alignment at H-paniculata_contig8150:1511..10218+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTTATCAACTTGGACGCCGACGTGTCGCACCGCCTGGAGGCGAGCAC
GACGGCTAGCTTCCTCGAGATTTACGGCGAAGATGTGTATGATCTCCTTA
GCGACGGGCACGCCCCGGGCACCAAGCGCATGTTTATCAACTTGGACGCC
GACGTGTCGCACCGCCTGGAGGCGAGCACGACGGCTAGCTTCCTCGAGAT
TTACGGCGAAGATGTGTATGATCTCCTTAGCGACGGGCACGCCCCGGGCA
CCAAGCGCATGCAGGTGCTCGAGGACAAGAACGGAGTGTTCGTGAGTGGG
CTAAGTCAAGTTCCCGTACTGGGCTGGGAGGCAGCGCTGGATGTACTCAG
CCAGGGCGTCCTCAACCGAACCACCGCGTCTACCCTGATGAACACGGTCA
GCAGTCGCTCCCACGCGGTGTTTACCATCAATCTCACCCAGAGTATCAAA
GATGACGCTGATCCAAACGGCGACCCTCAGATGCAGGTGCTCGAGGACAA
GAACGGAGTGTTCGTGAGTGGGCTAAGTCAAGTTCCCGTACTGGGCTGGG
AGGCAGCGCTGGATGTACTCAGCCAGGGCGTCCTCAACCGAACCACCGCG
TCTACCCTGATGAACACGGTCAGCAGTCGCTCCCACGCGGTGTTTACCAT
CAATCTCACCCAGAGTATCAAAGATGACGCTGATCCAAACGGCGACCCTC
AGACGGTTACATCGAAACTAACTTTCGTGGATCTTGCTGGAAGCGAGCGA
CTCGGCAGGACTGGCGCGGAGGGTCAGCGGAAACGCGAAGGAATTCAGAT
TAACCAGACGGTTACATCGAAACTAACTTTCGTGGATCTTGCTGGAAGCG
AGCGACTCGGCAGGACTGGCGCGGAGGGTCAGCGGAAACGCGAAGGAATT
CAGATTAACCAGGGACTGCTGGCTCTGGGCAACGTGGTGAATGCTCTGGG
AGATGACCGGCCCGAAAAGAAGAGTGGTTATGTACCGTACCGGCAATCGA
AACTCACCAGGCTACTGCAGGGACTGCTGGCTCTGGGCAACGTGGTGAAT
GCTCTGGGAGATGACCGGCCCGAAAAGAAGAGTGGTTATGTACCGTACCG
GCAATCGAAACTCACCAGGCTACTGCAGGACGCGCTGGGAGGCAATTCTC
AGACACTGTTCCTGGCGTGCGTGAGTCCCGCGGCAGATTCGATCAACGAG
ACGGTCGCCGCCTTACACTACGCCAATCGCGCGCGCAATATCAAGAACAA
AGTGGACGCGCTGGGAGGCAATTCTCAGACACTGTTCCTGGCGTGCGTGA
GTCCCGCGGCAGATTCGATCAACGAGACGGTCGCCGCCTTACACTACGCC
AATCGCGCGCGCAATATCAAGAACAAAGTGGTAAAGAACACGGACGGAGC
GAAGGAGGAGATGAGGAGACTACGCTCCATGGCCGCCGCGCTCCAAATGG
AGCTCGTTCGCGAGCATTTCCGTCTCGGAGAGGGAGGGTAAAGAACACGG
ACGGAGCGAAGGAGGAGATGAGGAGACTACGCTCCATGGCCGCCGCGCTC
CAAATGGAGCTCGTTCGCGAGCATTTCCGTCTCGGAGAGGGAGGATGCTC
AATCACTTATCGACAAACTCAACGCACTGGGGAGGGGGGGATGCTCAATC
ACTTATCGACAAACTCAACGCACTGGGGAGGGGGGGGGAGATCCGGAGGC
CACCGGCGGACCTGCAGGACTTGGTTTAGGGCCGAACGCTCAAGCAGAGG
AAATTTTGGGGAGGGAAGATGTCAAGGCTTATCTCAAGTTGGGAGATCCG
GAGGCCACCGGCGGACCTGCAGGACTTGGTTTAGGGCCGAACGCTCAAGC
AGAGGAAATTTTGGGGAGGGAAGATGTCAAGGCTTATCTCAAGTTGGCGA
AGGTAACCGAGGCCTCCCGCAAGCCCCAGGGACATGGCGCACCTCTACTG
TTCGGATCCGGTTGCGCCGACACCGACGCCTCCGTCGCATCCTCGGGGGT
AGGGCCTTATCTGTCCCCGCGGAATAACTGCATGCTTACCACCCCACGTA
GGGTGCTGGGCGATAGTCGAGGGCTGGCCGGGGTAGGTGGGGCGGGGGCG
GCAGGGGGGGCGGGCAATGGGTCGAGTTTGGCTGGGGGGGCGGGGACGGG
GCGGGCGGGGGGGGAGAGCGGGGAGGATGAAGGGGAAGGCTTTGATCTGG
ATGAGGCGAAGGTAACCGAGGCCTCCCGCAAGCCCCAGGGACATGGCGCA
CCTCTACTGTTCGGATCCGGTTGCGCCGACACCGACGCCTCCGTCGCATC
CTCGGGGGTAGGGCCTTATCTGTCCCCGCGGAATAACTGCATGCTTACCA
CCCCACGTAGGGTGCTGGGCGATAGTCGAGGGCTGGCCGGGGTAGGTGGG
GCGGGGGCGGCAGGGGGGGCGGGCAATGGGTCGAGTTTGGCTGGGGGGGC
GGGGACGGGGCGGGCGGGGGGGGAGAGCGGGGAGGATGAAGGGGAAGGCT
TTGATCTGGATGAGGGTTTGGATAATGACCCCGAGGAGGAACTGGCGGTG
CTAGACCAGCTCATCGAGTGGCAGCGGCAGACTGGAGAATATGGAGTTGC
TGCCAAGTGAGGTTTGGATAATGACCCCGAGGAGGAACTGGCGGTGCTAG
ACCAGCTCATCGAGTGGCAGCGGCAGACTGGAGAATATGGAGTTGCTGCC
AAGTGA
back to top