mRNA_H-paniculata_contig8111.16134.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8111.16134.1 vs. uniprot
Match: D7FUT2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUT2_ECTSI) HSP 1 Score: 175 bits (443), Expect = 2.530e-53 Identity = 99/119 (83.19%), Postives = 100/119 (84.03%), Query Frame = 1
Query: 1 QVNKSMEGVVKGMGSALKAMDVERISKTMDNFEQQFEDMDVRAGYMENAMSDSTAMSTPQEQVDDLIQMVADEAGLELGEQLDDAGPVSNKVPAKPVAAPAETNGE-DELANRLAALRK 354
QVNKSME MDVERISKTMD+FEQQFEDMDVRAGYMENAM DSTAMSTPQEQVD LIQMVADEAGLELGEQLDDAGPVSNKVPAKP AAPA GE DELANRLAALRK
Sbjct: 90 QVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALRK 208
BLAST of mRNA_H-paniculata_contig8111.16134.1 vs. uniprot
Match: A0A836CEV0_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEV0_9STRA) HSP 1 Score: 139 bits (349), Expect = 3.950e-39 Identity = 81/118 (68.64%), Postives = 90/118 (76.27%), Query Frame = 1
Query: 1 QVNKSMEGVVKGMGSALKAMDVERISKTMDNFEQQFEDMDVRAGYMENAMSDSTAMSTPQEQVDDLIQMVADEAGLELGEQLDDAGPVSNKVPAKPVAAPAETNGEDELANRLAALRK 354
Q+NKSMEGVVKGM SAL +MDVERIS TMD FE+QFEDMDV AGYMEN+M +TAMSTP +QVD+LIQMVADE GLE+G +LDDAG V VPA E D LA RLA LRK
Sbjct: 90 QMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPAAQQQPAQEV---DALAQRLADLRK 204
BLAST of mRNA_H-paniculata_contig8111.16134.1 vs. uniprot
Match: A0A836C887_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C887_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.030e-38 Identity = 82/119 (68.91%), Postives = 91/119 (76.47%), Query Frame = 1
Query: 1 QVNKSMEGVVKGMGSALKAMDVERISKTMDNFEQQFEDMDVRAGYMENAMSDSTAMSTPQEQVDDLIQMVADEAGLELGEQLDDAGPVSNKVP-AKPVAAPAETNGEDELANRLAALRK 354
QV+KSM+GVVKGM ALK MDVERISKTMD FE+QFEDMDV AGYMEN+M +TAMSTP +QVD LIQMVADE GLE+ QLDDAG V VP A P AA D+L+ RLA LRK
Sbjct: 90 QVDKSMQGVVKGMRKALKTMDVERISKTMDQFEKQFEDMDVVAGYMENSMGATTAMSTPADQVDQLIQMVADEHGLEVASQLDDAGKVGAAVPQAGPAAA-------DDLSQRLADLRK 201
BLAST of mRNA_H-paniculata_contig8111.16134.1 vs. uniprot
Match: A0A7S2H0C6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0C6_9STRA) HSP 1 Score: 132 bits (331), Expect = 3.870e-36 Identity = 77/117 (65.81%), Postives = 92/117 (78.63%), Query Frame = 1
Query: 1 QVNKSMEGVVKGMGSALKAMDVERISKTMDNFEQQFEDMDVRAGYMENAMSDSTAMSTPQEQVDDLIQMVADEAGLELGEQLDDAGPVSNKVPAKPVAAPAETNGEDELANRLAALR 351
Q++ +M GVV+GMGSALK+MDVE+IS TM +FEQQFEDMDVRAGYME+AM+ STA +TPQE VD LI+MVADE L LG LDDAG V N+ P + A E+ G+D LA RLAALR
Sbjct: 112 QISTAMSGVVQGMGSALKSMDVEKISATMTDFEQQFEDMDVRAGYMEDAMNSSTASATPQEDVDGLIKMVADENNLALGSALDDAGAVGNEAP-QAKADEKESQGDD-LAARLAALR 226
BLAST of mRNA_H-paniculata_contig8111.16134.1 vs. uniprot
Match: A0A8K1CUU3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUU3_PYTOL) HSP 1 Score: 130 bits (326), Expect = 1.280e-35 Identity = 71/118 (60.17%), Postives = 92/118 (77.97%), Query Frame = 1
Query: 1 QVNKSMEGVVKGMGSALKAMDVERISKTMDNFEQQFEDMDVRAGYMENAMSDSTAMSTPQEQVDDLIQMVADEAGLELGEQLDDAGPVSNKVPAKPVAAPAETNGEDELANRLAALRK 354
Q+ ++M GVVKGM + + +M+VE+IS+TMD FEQQFED+DVRA YME AMS+ T+M+TP +QVDDLIQMVADE GL++ QLD AG V ++P AA AE +D+L+ RLAALRK
Sbjct: 93 QLKQNMSGVVKGMDTVMASMNVEKISRTMDQFEQQFEDLDVRAAYMEGAMSNGTSMTTPVDQVDDLIQMVADENGLKVAGQLDSAGMVGTELPT---AAAAEKKSQDDLSMRLAALRK 207
BLAST of mRNA_H-paniculata_contig8111.16134.1 vs. uniprot
Match: A0A7S3JWC9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWC9_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.310e-34 Identity = 72/117 (61.54%), Postives = 92/117 (78.63%), Query Frame = 1
Query: 4 VNKSMEGVVKGMGSALKAMDVERISKTMDNFEQQFEDMDVRAGYMENAMSDSTAMSTPQEQVDDLIQMVADEAGLELGEQLDDAGPVSNKVPAKPVAAPAETNGEDELANRLAALRK 354
++K+M VVKGM SALK+MDVE+ISKTMD FE+QFEDMDVRAGYMEN+M+ STA +TP++QVD LI VADE L+L LDDAG VS KVP + ++ G+++LA+RL ALR+
Sbjct: 91 MSKAMGNVVKGMSSALKSMDVEKISKTMDAFEKQFEDMDVRAGYMENSMNASTASATPEDQVDSLISEVADEHQLDLSFALDDAGAVSTKVPQEQ----KQSEGKEDLASRLDALRR 203
BLAST of mRNA_H-paniculata_contig8111.16134.1 vs. uniprot
Match: A0A7S2WTG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTG4_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.910e-34 Identity = 76/122 (62.30%), Postives = 89/122 (72.95%), Query Frame = 1
Query: 1 QVNKSMEGVVKGMGSALKAMDVERISKTMDNFEQQFEDMDVRAGYMENAMSDSTAMSTPQEQVDDLIQMVADEAGLELGEQLDDAGPVSNKVPAKPVAAPAETNG-----EDELANRLAALR 351
Q+NK+M GVV+GMGSALK+MDVE+IS TM NFEQQFEDMDVRAGYME AM+ ST+ +TPQE VD LI++VADE LELG +DA A P A PAE +D+LA RLAALR
Sbjct: 90 QINKAMVGVVQGMGSALKSMDVEKISATMTNFEQQFEDMDVRAGYMEGAMNSSTSSATPQEDVDSLIKIVADENQLELGAAFEDA--------AVPTAKPAEAEQTEAAPQDDLAARLAALR 203
BLAST of mRNA_H-paniculata_contig8111.16134.1 vs. uniprot
Match: A0A7S0C3P8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3P8_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.160e-34 Identity = 68/117 (58.12%), Postives = 86/117 (73.50%), Query Frame = 1
Query: 1 QVNKSMEGVVKGMGSALKAMDVERISKTMDNFEQQFEDMDVRAGYMENAMSDSTAMSTPQEQVDDLIQMVADEAGLELGEQLDDAGPVSNKVPAKPVAAPAETNGEDELANRLAALR 351
QV SM+GVVKGM L+AMDVE+IS TMD FEQQFED+DV++GYME+AM+ +TA STP +QVD+L++MVADE L+LGE+ AGP+S K P PA+ +D L RL LR
Sbjct: 20 QVTASMKGVVKGMSKGLQAMDVEKISNTMDTFEQQFEDLDVKSGYMEDAMNATTATSTPADQVDELVKMVADENNLDLGEEFAQAGPLSKKKPQVVEEEPAKAPEKDNLQARLNNLR 136
BLAST of mRNA_H-paniculata_contig8111.16134.1 vs. uniprot
Match: K3WSW3_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSW3_GLOUD) HSP 1 Score: 122 bits (307), Expect = 1.050e-32 Identity = 67/118 (56.78%), Postives = 90/118 (76.27%), Query Frame = 1
Query: 4 VNKSMEGVVKGMGSALKAMDVERISKTMDNFEQQFEDMDVRAGYMENAMSDSTAMSTPQEQVDDLIQMVADEAGLELGEQLDDAGPVSNKVPAKPVA-APAETNGEDELANRLAALRK 354
+ K+M GVVKGM + + +M+VE+IS+TMD FE+ FEDMDVRA YME AM++ T++STP +QVDDLIQMVADE GL++ QLD AG V ++P+ + A E +D+L+ RLAALRK
Sbjct: 94 LKKNMNGVVKGMDTVMASMNVEKISQTMDQFEKHFEDMDVRAAYMEGAMNNGTSLSTPADQVDDLIQMVADENGLKIAGQLDSAGLVGTELPSAATSDAVKEKKSQDDLSMRLAALRK 211
BLAST of mRNA_H-paniculata_contig8111.16134.1 vs. uniprot
Match: W4FS35_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=W4FS35_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.370e-32 Identity = 70/117 (59.83%), Postives = 85/117 (72.65%), Query Frame = 1
Query: 4 VNKSMEGVVKGMGSALKAMDVERISKTMDNFEQQFEDMDVRAGYMENAMSDSTAMSTPQEQVDDLIQMVADEAGLELGEQLDDAGPVSNKVPAKPVAAPAETNGEDELANRLAALRK 354
+ +M GVVKGM + +M+VE+ISKTMD FE+QFED+DVRA YME AM+ +TA +TP +QVDDLIQMVADE GL + QLD AG V + V VAAPA D+L RLAALRK
Sbjct: 94 LKSNMSGVVKGMNVVMDSMNVEKISKTMDQFERQFEDLDVRAAYMEGAMNSTTAGATPADQVDDLIQMVADENGLVIAGQLDSAGAVGSHVS---VAAPAAAQATDDLTARLAALRK 207 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8111.16134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8111.16134.1 >prot_H-paniculata_contig8111.16134.1 ID=prot_H-paniculata_contig8111.16134.1|Name=mRNA_H-paniculata_contig8111.16134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp MEGVVKGMGSALKAMDVERISKTMDNFEQQFEDMDVRAGYMENAMSDSTAback to top mRNA from alignment at H-paniculata_contig8111:9799..10155- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8111.16134.1 ID=mRNA_H-paniculata_contig8111.16134.1|Name=mRNA_H-paniculata_contig8111.16134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=357bp|location=Sequence derived from alignment at H-paniculata_contig8111:9799..10155- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8111:9799..10155- >mRNA_H-paniculata_contig8111.16134.1 ID=mRNA_H-paniculata_contig8111.16134.1|Name=mRNA_H-paniculata_contig8111.16134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at H-paniculata_contig8111:9799..10155- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |