mRNA_H-paniculata_contig8081.16091.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8081.16091.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 319 bits (818), Expect = 2.770e-108 Identity = 164/220 (74.55%), Postives = 183/220 (83.18%), Query Frame = 1
Query: 1 MKTSFCAAAG-AVAAGLVASSAHAM-VATAQQEITAFNPEDFVFPLGGPEPDNIDASGFQSRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPRATEMLYVIKGEHLRVAFVEENEGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCEPATYLSALNNEDPGVVTITTRFFDLPSEAIQASLNFDDPTLKALIESLPEAPALARRQCLQRCGLPSDDD 654
MKTSFC+AAG VAAG ++S+A A V TAQQ+IT FNPEDFVF LGGPEPD GFQ R A + QIPAL+GQG+AM L NL+ C INLPH HPRATEM YVI GEHLRVAFVEEN GEGAVVNDL QGDVTF+PQGLIHY+QNL CEP T+L+ALNN+DPG VTITTRFF+LPSEAIQASLNF+DP L+ LIESLP+APA ARRQCL+RCGL D
Sbjct: 1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPD-APVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLADGGD 219
BLAST of mRNA_H-paniculata_contig8081.16091.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE) HSP 1 Score: 314 bits (804), Expect = 4.760e-106 Identity = 158/214 (73.83%), Postives = 183/214 (85.51%), Query Frame = 1
Query: 1 MKTSFCAAAG-AVAAGLVASSAHAMVATAQQEITAFNPEDFVFPLGGPEPDNIDASGFQSRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPRATEMLYVIKGEHLRVAFVEENEGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCEPATYLSALNNEDPGVVTITTRFFDLPSEAIQASLNFDDPTLKALIESLPEAPALARRQCLQRCGL 639
MKTSFCAAAG +AAGL+++ V T QQ+IT +NPEDFVF LGGPEPD + GFQ R A VNQ+PAL+GQG++M L NL+PCAINLPH HPRATEM+YVIKGE LRVAFVEEN GEGAVVNDL QGDV F+PQGLIHYQQNLDCEPAT+L+ALNNEDPG +TITTRFF+LP EAIQAS+NF++P L+ LIESLP+APA AR+QCLQRC +
Sbjct: 1 MKTSFCAAAGFVIAAGLMSAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDAL-VDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRM 213
BLAST of mRNA_H-paniculata_contig8081.16091.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA) HSP 1 Score: 154 bits (389), Expect = 1.660e-43 Identity = 80/183 (43.72%), Postives = 110/183 (60.11%), Query Frame = 1
Query: 103 FNPEDFVFPLGGPEPD---NIDASGFQSRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPRATEMLYVIKGEHLRVAFVEENEGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCEPATYLSALNNEDPGVVTITTRFFDLPSEAIQASLNFDDPTLKALIESLPEAPALARRQCLQRCGLP 642
F+ EDFVF E + D +G S+ AN+N P ++ +A F + PC INLPH HPR TE Y+I+GE L V FV E+ V+ND+ TF+PQGL+HYQQN+ CEPA ++S L++ DPG++ I LP EAI A+ + D+ + + LP+ PA R +CL RCGLP
Sbjct: 22 FDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEGE-LTVGFVMESGR--TVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAAAVAGLPEEAIAAAFDEDEAFVAQMRMGLPKVPARGRAECLVRCGLP 201
BLAST of mRNA_H-paniculata_contig8081.16091.1 vs. uniprot
Match: A0A0L0FR85_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR85_9EUKA) HSP 1 Score: 155 bits (392), Expect = 5.530e-43 Identity = 78/184 (42.39%), Postives = 114/184 (61.96%), Query Frame = 1
Query: 103 FNPEDFVFPLGGPEPDNIDASGFQSRVANVN--QIPALEGQGVAMVLFNLEPCAINLPHEHPRATEMLYVIKGEHLRVAFVEENEGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCEPATYLSALNNEDPGVVTITTRFFDLPSEAIQASLNFDDPTLKALIESLPEAPALARRQCLQRCGLPSD 648
F+ EDFVF +D+ G + VN + P ++ G++ F++ PC INLPH HPRATE LY+I+G+ + + FV + ++NDL + VTF+P+G +HYQQN++CE A ++S L+NEDPGV+ +++ LP EA+ A+ N D + L LPE PA AR +CL RCGL D
Sbjct: 105 FDNEDFVFDFTDSNKVTVDSLGLGGNIQPVNLEEFPIMQLAGMSYSRFSIGPCGINLPHVHPRATESLYMIEGQ-VTLGFVSTEDR--LIMNDLEKDQVTFFPKGHLHYQQNMNCENAEFISILDNEDPGVLVVSSALLSLPDEALTATFNEDQALIAQLRLGLPEGPARARSECLARCGLDMD 285
BLAST of mRNA_H-paniculata_contig8081.16091.1 vs. uniprot
Match: A0A0L0FUE8_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FUE8_9EUKA) HSP 1 Score: 153 bits (386), Expect = 5.080e-42 Identity = 78/179 (43.58%), Postives = 108/179 (60.34%), Query Frame = 1
Query: 103 FNPEDFVFPLGGPEPDNIDASGFQSRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPRATEMLYVIKGEHLRVAFVEENEGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCEPATYLSALNNEDPGVVTITTRFFDLPSEAIQASLNFDDPTLKALIESLPEAPALARRQCLQRCGL 639
F+ EDFV +P G S+ AN N +P ++ +A F + PC INLPH HPR TE +Y+I+G L V FV EG ++ND+ TF+PQGL+HYQQN+ CEPA ++S LN+ DPG++ I +LPSEA++A+ + D + L LP PA R +CL+RCGL
Sbjct: 119 FDAEDFVIDFA-TQPLESTGLGGTSQPANRNNVPVIQASNMAQTRFRIAPCGINLPHVHPRGTESVYIIEGA-LTVGFV--TEGGRLILNDVKTDQSTFFPQGLLHYQQNMACEPAGFISILNSSDPGLLVIPAALAELPSEALEATFDEDAAFVNQLRIGLPAGPARGRAECLRRCGL 293
BLAST of mRNA_H-paniculata_contig8081.16091.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC) HSP 1 Score: 147 bits (372), Expect = 1.130e-39 Identity = 79/179 (44.13%), Postives = 109/179 (60.89%), Query Frame = 1
Query: 115 DFVFPLGGPEPDNIDASGFQSRV--ANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPRATEMLYVIKGEHLRVAFVEENEGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCEPATYLSALNNEDPGVVTITTRFFDLPSEAIQASLNFDDPTLKALIESLPEAPALA--RRQCLQRCGL 639
DF+F + D +G V A+V+Q PAL G G++ L +L PC+IN PH HPRATE++Y+IKG + V F EEN G V ND+ +GD F+P LIH+Q N CEPA +++ LN++D GV TI FF LP + + +L D+ + L E LP PAL R +C ++CGL
Sbjct: 144 DFIFDFNTARAE-ADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKGR-VSVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319
BLAST of mRNA_H-paniculata_contig8081.16091.1 vs. uniprot
Match: A0A836CNU2_9STRA (RmlC-like cupin domain-containing protein n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU2_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.410e-38 Identity = 80/184 (43.48%), Postives = 105/184 (57.07%), Query Frame = 1
Query: 115 DFVFPLGGPEPDNIDASGFQSRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPRATEMLYVIKG--EHLRVAFVEENEGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCEPATYLSALNNEDPGVVTITTRFF------DLPSEAIQASLNFDDPTLKALIESLPEAPALARRQCLQRCGLP 642
DF F L G + + G ++ + Q+P+L G+ VAMV LEPC INLPH HPRATE+LYV+ E + AFVEEN G + N + G+ F+PQGL H Q N+ C PAT ++AL ++D GV TITT D E + A+L L LI P+ PA+ +C QRCGLP
Sbjct: 60 DFKFDLDGSKATTGNGGG-SAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTIVTGEAAFFPQGLTHVQVNMGCTPATMIAALGSDDFGVQTITTTALKGLAGADGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGLP 241
BLAST of mRNA_H-paniculata_contig8081.16091.1 vs. uniprot
Match: A0A814L9M3_ADIRI (Hypothetical protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A814L9M3_ADIRI) HSP 1 Score: 142 bits (358), Expect = 2.470e-38 Identity = 74/180 (41.11%), Postives = 110/180 (61.11%), Query Frame = 1
Query: 106 NPEDFVFPLGGPEPDNIDASGFQSRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPRATEMLYVIKGEHLRVAFVEENEGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCEPATYLSALNNEDPGVVTITTRFFD-LPSEAIQASLN-FDDPTLKALIESLPEAPALARRQCLQRCGL 639
NP DF+F +G ++ A + P L G GVAM L L PC INLPH HPRATE+ Y + G H +V F +EN G ++N++ + V +P+G IH++QNL+CEPAT+++A N+EDPGV+TI +F LP+ I A+L + T++ + ++ P+L +C +RCGL
Sbjct: 73 NPSDFIFDFNNATTGVSRGTGGRTVSATASNFPGLIGHGVAMTLGFLGPCGINLPHTHPRATEINYSVDG-HFQVGFYQEN-GAAFIMNEIQKNQVAVFPKGAIHFEQNLNCEPATFVAAFNSEDPGVLTIANAYFGALPATVIGANLGGLNITTIEDIRMNIQGNPSLGIEECRRRCGL 250
BLAST of mRNA_H-paniculata_contig8081.16091.1 vs. uniprot
Match: A0A835YZF9_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA) HSP 1 Score: 140 bits (352), Expect = 3.720e-38 Identity = 79/184 (42.93%), Postives = 105/184 (57.07%), Query Frame = 1
Query: 115 DFVFPLGGPEPDNIDASGFQSRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPRATEMLYVIKG--EHLRVAFVEENEGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCEPATYLSALNNEDPGVVTITTRFFDLPS------EAIQASLNFDDPTLKALIESLPEAPALARRQCLQRCGLP 642
DF F L G + G ++ + Q+P+L G+ VAMV LEPC INLPH HPRATE+LYV+ E + AFVEEN G + N + G+ F+PQGL H Q N+ C PAT ++AL ++D GV TITT + + E + A+L L LI P+ PA+ +C QRCGLP
Sbjct: 9 DFKFDLAGSTATAGNGGG-SAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTVVAGEAAFFPQGLTHMQVNMGCTPATMIAALGSDDFGVQTITTTALEGLAGAEGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGLP 190
BLAST of mRNA_H-paniculata_contig8081.16091.1 vs. uniprot
Match: A0A433DF28_9FUNG (RmlC-like cupin n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DF28_9FUNG) HSP 1 Score: 140 bits (354), Expect = 6.210e-38 Identity = 76/189 (40.21%), Postives = 115/189 (60.85%), Query Frame = 1
Query: 79 TAQQEITAFNPEDFVFPLGGPEPDNIDASGFQSRVANVNQIPALEGQGVAMVLFNLEPCAINLPHEHPRATEMLYVIKGEHLRVAFVEENEGEGAVVNDLYQGDVTFYPQGLIHYQQNLDCEPATYLSALNNEDPGVVTITTRFFD-LPSEAIQASLN-FDDPTLKALIESLPEAPALARRQCLQRCGL 639
T Q ++ + +DFVF + G ++ A PAL G +AM + + PC+INLPH HPRATE+ ++ +G+ F EEN G +VN L++G+VT +P G IH++QNL+CEPA +++A N+EDPGV TI + F LP++ + ASL +K L + LP+ PA+ ++C +RCGL
Sbjct: 47 TETQRLSLLDNKDFVFNFLTSKTGVSMGDGGRTVAATAANFPALIGHNIAMTVGFIGPCSINLPHIHPRATEINFIAQGK-FEAGFFEEN-GARFIVNTLHKGEVTVFPMGAIHFEQNLNCEPAVFVAAFNSEDPGVSTIGSNFIGGLPADIVSASLRGLSIEQVKELTKYLPKNPAIGIQECRKRCGL 233 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8081.16091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8081.16091.1 >prot_H-paniculata_contig8081.16091.1 ID=prot_H-paniculata_contig8081.16091.1|Name=mRNA_H-paniculata_contig8081.16091.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=223bp MKTSFCAAAGAVAAGLVASSAHAMVATAQQEITAFNPEDFVFPLGGPEPDback to top mRNA from alignment at H-paniculata_contig8081:1035..3129+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8081.16091.1 ID=mRNA_H-paniculata_contig8081.16091.1|Name=mRNA_H-paniculata_contig8081.16091.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2095bp|location=Sequence derived from alignment at H-paniculata_contig8081:1035..3129+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8081:1035..3129+ >mRNA_H-paniculata_contig8081.16091.1 ID=mRNA_H-paniculata_contig8081.16091.1|Name=mRNA_H-paniculata_contig8081.16091.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1338bp|location=Sequence derived from alignment at H-paniculata_contig8081:1035..3129+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |