mRNA_H-paniculata_contig8027.16047.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8027.16047.1 vs. uniprot
Match: A0A2G3DGV1_CAPCH (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3DGV1_CAPCH) HSP 1 Score: 251 bits (641), Expect = 1.190e-80 Identity = 120/176 (68.18%), Postives = 147/176 (83.52%), Query Frame = 1
Query: 43 GKTVEQRYQKKTQLEHILLRPDTYIGSTEKMTQEMWIYDDVTERIIKRPVTYVPGLYKIFDEIIVNAADNKQRDSNMSKLKVSIDAENGSISVWNDGKGIPIQMHREHHMYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADERNGRHYRQVFRNNMQEK 570
GKT+EQ YQKKTQLEHILLRP+TYIGS EK TQ +W++++ + ++ RPVTYVPGLYKIFDEI+VNAADNKQRD M L+V ID E ISV+N+G GIP+++H E +YVPELIFG+LLT SN+DDD+KKTTGGRNG+GAKL NI+STEFV+ETAD + R Y+QVF NNM +K
Sbjct: 21 GKTIEQTYQKKTQLEHILLRPETYIGSVEKHTQTLWVWEN--DAMVHRPVTYVPGLYKIFDEILVNAADNKQRDPKMDALEVVIDPEQNFISVYNNGDGIPVEIHSEEGVYVPELIFGHLLTSSNYDDDEKKTTGGRNGYGAKLTNIFSTEFVIETADGKRQRKYKQVFSNNMGKK 194
BLAST of mRNA_H-paniculata_contig8027.16047.1 vs. uniprot
Match: A0A446WI00_TRITD (DNA topoisomerase 2 n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446WI00_TRITD) HSP 1 Score: 254 bits (649), Expect = 1.320e-80 Identity = 121/189 (64.02%), Postives = 152/189 (80.42%), Query Frame = 1
Query: 4 SRQASNTDGGLDGGKTVEQRYQKKTQLEHILLRPDTYIGSTEKMTQEMWIYDDVTERIIKRPVTYVPGLYKIFDEIIVNAADNKQRDSNMSKLKVSIDAENGSISVWNDGKGIPIQMHREHHMYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADERNGRHYRQVFRNNMQEK 570
S + N+ G GKT+E+ YQKKTQLEHILLRPDTY+GS EK T +W+Y+D ++ RPVTYVPGLYKIFDEI+VNAADNKQRD +M LKV ID E IS++N+G G+P+++H+E +YVPELIFGNLLT SN+DD+++KTTGGRNG+GAKLANI+STEFV+ETAD R + Y+QVF NM +K
Sbjct: 12 SSSSHNSAAGDAAGKTIEEMYQKKTQLEHILLRPDTYVGSIEKHTATLWVYEDGA--MVNRPVTYVPGLYKIFDEILVNAADNKQRDPSMDSLKVDIDVEGCCISIYNNGDGVPVEIHQEEKIYVPELIFGNLLTSSNYDDNERKTTGGRNGYGAKLANIFSTEFVIETADGRRQKRYKQVFSENMGKK 198
BLAST of mRNA_H-paniculata_contig8027.16047.1 vs. uniprot
Match: A0A6A6KZP2_HEVBR (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6KZP2_HEVBR) HSP 1 Score: 248 bits (633), Expect = 2.030e-80 Identity = 117/175 (66.86%), Postives = 145/175 (82.86%), Query Frame = 1
Query: 46 KTVEQRYQKKTQLEHILLRPDTYIGSTEKMTQEMWIYDDVTERIIKRPVTYVPGLYKIFDEIIVNAADNKQRDSNMSKLKVSIDAENGSISVWNDGKGIPIQMHREHHMYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADERNGRHYRQVFRNNMQEK 570
KT+E+ YQKK+QLEHILLRPDTYIGS EK TQ +W+Y+D ++I+ R V YVPGLYKIFDEI+VNAADNKQRD M +KV ID EN ISV+N+G G+P+++H+E +YVPELIFG+LLT SN+DD KKTTGGRNG+GAKL NI+STEFV+ETAD + + Y+QVF NNM +K
Sbjct: 22 KTIEETYQKKSQLEHILLRPDTYIGSIEKHTQNLWVYED--DKIVHRQVNYVPGLYKIFDEILVNAADNKQRDPTMDSMKVVIDVENNFISVYNNGDGVPVEIHKEEGVYVPELIFGHLLTSSNYDDTVKKTTGGRNGYGAKLTNIFSTEFVIETADGKRRKKYKQVFSNNMGKK 194
BLAST of mRNA_H-paniculata_contig8027.16047.1 vs. uniprot
Match: A0A397CXW9_9STRA (DNA topoisomerase 2 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CXW9_9STRA) HSP 1 Score: 264 bits (675), Expect = 3.370e-80 Identity = 124/174 (71.26%), Postives = 145/174 (83.33%), Query Frame = 1
Query: 40 GGKTVEQRYQKKTQLEHILLRPDTYIGSTEKMTQEMWIYDDVTERIIKRPVTYVPGLYKIFDEIIVNAADNKQRDSNMSKLKVSIDAENGSISVWNDGKGIPIQMHREHHMYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADERNGRHYRQVFRNNM 561
GG TVEQ YQKKTQLEHILLRPDTY+GS E Q +W+YDD +++++ VT PGLYKIFDEIIVNA DNKQRDS M LKV+ID+E G ISVWN+G GIP+ MH+EH++YVPELIFG+LLTGSNFDD +KKTTGGRNG+GAKLANI+S EFVVETA G+ YRQVF +NM
Sbjct: 217 GGLTVEQIYQKKTQLEHILLRPDTYVGSIEPAEQTLWVYDDENSKMVQKKVTICPGLYKIFDEIIVNACDNKQRDSTMDTLKVTIDSEKGEISVWNNGNGIPVVMHKEHNVYVPELIFGHLLTGSNFDDKKKKTTGGRNGYGAKLANIFSKEFVVETASREQGKRYRQVFSDNM 390
BLAST of mRNA_H-paniculata_contig8027.16047.1 vs. uniprot
Match: A0A8B8N0L7_9MYRT (DNA topoisomerase 2 n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8N0L7_9MYRT) HSP 1 Score: 254 bits (650), Expect = 4.850e-80 Identity = 120/173 (69.36%), Postives = 145/173 (83.82%), Query Frame = 1
Query: 43 GKTVEQRYQKKTQLEHILLRPDTYIGSTEKMTQEMWIYDDVTERIIKRPVTYVPGLYKIFDEIIVNAADNKQRDSNMSKLKVSIDAENGSISVWNDGKGIPIQMHREHHMYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADERNGRHYRQVFRNNM 561
GKTVE+ YQKK+QLEHILLRPDTYIGS EK TQ +W+YD + ++ RPVTYVPGLYKIFDEI+VNAADNKQRD M +KV+ID E ISV+N+G G+P++MHRE ++YVPELIFG+LLT SN+DD +KTTGGRNG+GAKL NI+STEFV+ETAD +NG Y+QVF NM
Sbjct: 28 GKTVEETYQKKSQLEHILLRPDTYIGSVEKHTQALWVYDG--DEMVHRPVTYVPGLYKIFDEILVNAADNKQRDPRMDSVKVTIDPERNLISVYNNGDGVPVEMHREENVYVPELIFGHLLTSSNYDDTVRKTTGGRNGYGAKLTNIFSTEFVIETADGKNGLKYKQVFSKNM 198
BLAST of mRNA_H-paniculata_contig8027.16047.1 vs. uniprot
Match: A0A067CRT5_SAPPC (DNA topoisomerase 2 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRT5_SAPPC) HSP 1 Score: 268 bits (684), Expect = 1.200e-79 Identity = 123/174 (70.69%), Postives = 151/174 (86.78%), Query Frame = 1
Query: 40 GGKTVEQRYQKKTQLEHILLRPDTYIGSTEKMTQEMWIYDDVTERIIKRPVTYVPGLYKIFDEIIVNAADNKQRDSNMSKLKVSIDAENGSISVWNDGKGIPIQMHREHHMYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADERNGRHYRQVFRNNM 561
GG TVEQ YQKKTQLEHILLRPDTY+GS E +TQ MW++D ++++ + +T PGLYKIFDEIIVNA DNKQRD +M LKV+ + E G+ISVWN+GKGIP+ MH+EH++YVPELIFG+LLTGSNFDD++KKTTGGRNG+GAKLANI+STEFVVETA + +G+ YRQVF+NNM
Sbjct: 34 GGLTVEQIYQKKTQLEHILLRPDTYVGSIEPVTQNMWVFDSEEKKMVNKKITICPGLYKIFDEIIVNACDNKQRDKSMDALKVTFNQETGAISVWNNGKGIPVVMHKEHNVYVPELIFGHLLTGSNFDDNKKKTTGGRNGYGAKLANIFSTEFVVETASKEDGKRYRQVFQNNM 207
BLAST of mRNA_H-paniculata_contig8027.16047.1 vs. uniprot
Match: A0A453PC10_AEGTS (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453PC10_AEGTS) HSP 1 Score: 248 bits (634), Expect = 1.550e-79 Identity = 118/189 (62.43%), Postives = 151/189 (79.89%), Query Frame = 1
Query: 4 SRQASNTDGGLDGGKTVEQRYQKKTQLEHILLRPDTYIGSTEKMTQEMWIYDDVTERIIKRPVTYVPGLYKIFDEIIVNAADNKQRDSNMSKLKVSIDAENGSISVWNDGKGIPIQMHREHHMYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADERNGRHYRQVFRNNMQEK 570
S + N+ G GKT+E+ YQKKTQLEHILLRPDTY+GS + TQ +W+Y+D ++ RPV+YVPGLYKIFDEI+VNAADNKQRD +M LKV ID E IS++N+G G+P+++H+E +YVPELIFG+LLT SN+DD+++KTTGGRNG+GAKLANI+STEFV+ETAD + YRQVF NM +K
Sbjct: 22 SSSSHNSAAGDAAGKTIEEMYQKKTQLEHILLRPDTYVGSVQNHTQTLWVYEDGA--MVNRPVSYVPGLYKIFDEILVNAADNKQRDPSMDSLKVDIDVEGCCISIYNNGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNERKTTGGRNGYGAKLANIFSTEFVIETADGHRLKRYRQVFSENMGKK 208
BLAST of mRNA_H-paniculata_contig8027.16047.1 vs. uniprot
Match: A0A7S2G2M9_9STRA (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G2M9_9STRA) HSP 1 Score: 246 bits (628), Expect = 2.300e-79 Identity = 120/172 (69.77%), Postives = 140/172 (81.40%), Query Frame = 1
Query: 46 KTVEQRYQKKTQLEHILLRPDTYIGSTEKMTQEMWIYDDVTERIIKRPVTYVPGLYKIFDEIIVNAADNKQRDSNMSKLKVSIDAENGSISVWNDGKGIPIQMHREHHMYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADERNGRHYRQVFRNNM 561
KT+EQ YQKKTQLEHILLRPDTYIGS EK+TQ+ W+YD VPGLYKIFDEI+VNAADNKQRDS MS++KV I+ SI VWN+G GIP++MH+E +YVPELIFG+LLTGSNFDDD+KKTTGGRNGFGAKLANI+S EFVVETA + G+ ++QVF NNM
Sbjct: 44 KTIEQIYQKKTQLEHILLRPDTYIGSIEKVTQQQWVYDXXXXXXXXXXXXXVPGLYKIFDEIMVNAADNKQRDSTMSQIKVEINQAANSIKVWNNGHGIPVEMHKEQKIYVPELIFGHLLTGSNFDDDEKKTTGGRNGFGAKLANIFSKEFVVETAAK--GKKFKQVFLNNM 213
BLAST of mRNA_H-paniculata_contig8027.16047.1 vs. uniprot
Match: K3X2K0_GLOUD (DNA topoisomerase 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2K0_GLOUD) HSP 1 Score: 267 bits (682), Expect = 2.400e-79 Identity = 126/188 (67.02%), Postives = 153/188 (81.38%), Query Frame = 1
Query: 34 LDGG---------KTVEQRYQKKTQLEHILLRPDTYIGSTEKMTQEMWIYDDVTERIIKRPVTYVPGLYKIFDEIIVNAADNKQRDSNMSKLKVSIDAENGSISVWNDGKGIPIQMHREHHMYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADERNGRHYRQVFRNNMQEK 570
+DGG +++EQ YQKKTQLEHILLRPDTY+GS E +TQ MW++DD +++ R +TYVPGLYKIFDEIIVNA DNKQRD M LKV IDAENG +SVWN+GKGIP+ MH+EH++YVPELIFG+LLTGSNFDD +KKTTGGRNG+GAKLANI+S EF+VETAD + Y+QVF +NM +K
Sbjct: 72 MDGGNGGEPSPAKQSIEQIYQKKTQLEHILLRPDTYVGSIEPVTQNMWVFDDENKKMEMRKITYVPGLYKIFDEIIVNACDNKQRDKTMDTLKVKIDAENGEVSVWNNGKGIPVVMHKEHNVYVPELIFGHLLTGSNFDDKKKKTTGGRNGYGAKLANIFSNEFIVETADSNTKQRYKQVFESNMGKK 259
BLAST of mRNA_H-paniculata_contig8027.16047.1 vs. uniprot
Match: A0A444FBY6_ENSVE (HATPase_c domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444FBY6_ENSVE) HSP 1 Score: 244 bits (623), Expect = 5.320e-79 Identity = 114/170 (67.06%), Postives = 142/170 (83.53%), Query Frame = 1
Query: 40 GGKTVEQRYQKKTQLEHILLRPDTYIGSTEKMTQEMWIYDDVTERIIKRPVTYVPGLYKIFDEIIVNAADNKQRDSNMSKLKVSIDAENGSISVWNDGKGIPIQMHREHHMYVPELIFGNLLTGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADERNGRHYRQVF 549
G KT+EQ YQKKTQLEHILLRPDTYIGS EK TQ +W+Y++V +I RPVTYVPGLYKIFDEI+VNAADNKQRD +M +KV ID + IS++N+G G+P+++H+E +YVPELIFG+LLT SN+DD+ KKTTGGRNG+GAKL NI+STEF++ETAD R + Y+QV
Sbjct: 70 GKKTIEQIYQKKTQLEHILLRPDTYIGSVEKHTQPLWVYENV--EMIHRPVTYVPGLYKIFDEILVNAADNKQRDPSMDTVKVEIDVDANRISIYNNGDGVPVEIHQEERVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGRRQKKYKQVI 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8027.16047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8027.16047.1 >prot_H-paniculata_contig8027.16047.1 ID=prot_H-paniculata_contig8027.16047.1|Name=mRNA_H-paniculata_contig8027.16047.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp GSRQASNTDGGLDGGKTVEQRYQKKTQLEHILLRPDTYIGSTEKMTQEMWback to top mRNA from alignment at H-paniculata_contig8027:7762..10279+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8027.16047.1 ID=mRNA_H-paniculata_contig8027.16047.1|Name=mRNA_H-paniculata_contig8027.16047.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2518bp|location=Sequence derived from alignment at H-paniculata_contig8027:7762..10279+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8027:7762..10279+ >mRNA_H-paniculata_contig8027.16047.1 ID=mRNA_H-paniculata_contig8027.16047.1|Name=mRNA_H-paniculata_contig8027.16047.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at H-paniculata_contig8027:7762..10279+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |