mRNA_H-paniculata_contig8022.16045.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8022.16045.1
Unique NamemRNA_H-paniculata_contig8022.16045.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: D8LTZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ1_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 5.190e-102
Identity = 184/246 (74.80%), Postives = 201/246 (81.71%), Query Frame = 1
Query:  604 LLVRHYLIHETGA*KLTMKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAY-GQPASLPVEPSLVPESTGPTGVDEFGLPVAPTPAEPTAQR 1338
            L V    +H +   + TMKRVFGKKKE  PAPSLSEAGGRVDERV   XXXXX LD EL+KYRNALKKAKG TATNIKKRAM+TLKRKKMYE QRDQMAGQQFNIEQT FAIDSIKDTATTVAAMKDA K LK ++KKI+IN VE+M DDM       +EIN++MGRSYNV DELDEDDL+AELACLDDEL+ L+ LEED  P+Y  QPASLP EPSLVPESTGPTGVDEFGLPV P PA P  +R
Sbjct:   58 LFVGTLSLHPSRGRRSTMKRVFGKKKEKGPAPSLSEAGGRVDERVAKIXXXXXGLDQELVKYRNALKKAKGPTATNIKKRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXXNEINDIMGRSYNVGDELDEDDLDAELACLDDELDALEGLEEDTGPSYVAQPASLPQEPSLVPESTGPTGVDEFGLPVNPAPARPAQER 303          
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A7S2FVB6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVB6_9STRA)

HSP 1 Score: 246 bits (627), Expect = 7.520e-75
Identity = 144/247 (58.30%), Postives = 169/247 (68.42%), Query Frame = 1
Query:  601 PLLVRHYLIH---ETGA*KLTMKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAYGQPASLPVEPSLVPESTGPT-------GVDEFGLPVAP 1311
            P LVR  L H        +  M R+FGKKK+  P PSL++A GR+D RV         LD EL KY+  LKKAKG TA NIK+RAM+TLKRKKMYEQQRDQMAGQ FNIEQTSFAIDSIKDT TTVAAMKDA K LK E KK+NI+ +E+              IN++MGR+Y +PDE+DE DL+AELACL+DELEGL++ E +A P+Y QPA +PVEPS VP             GVD FGLPVAP
Sbjct:    6 PELVRLVLAHLRRRASDLRAEMNRIFGKKKDVAPPPSLTDASGRIDSRVQAMDEKIAKLDLELRKYKEQLKKAKGPTAANIKRRAMETLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTTVAAMKDAAKTLKAETKKLNIDQIEDTQXXXXXXXXXXXXINDMMGRAYGMPDEVDEADLDAELACLEDELEGLEEGETEAAPSYLQPAGMPVEPSAVPAGAPAADAAAEADGVDAFGLPVAP 252          
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A7S2AMY1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMY1_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.450e-74
Identity = 147/227 (64.76%), Postives = 169/227 (74.45%), Query Frame = 1
Query:  655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAYGQPASLPVEPSLVPESTGPT--------GVDEFGLPVAP 1311
            M R+FGKKK T PAPSLS+A GR+D+RV   XXXXXX              AKG TA NIK+RAMDTLKRKKMYEQQRDQMAGQ FNIEQTSFAIDSIKDT TTVAAMK A   LK E KK+NI+ +E+  DD+ D+MEDM+EINE+MGRSY VPDE+DE+DL+AELACLDDELEG++  EE A  +Y  PA LPVEPS  P    P+        G+D+FGLPVAP
Sbjct:    1 MNRIFGKKKPTAPAPSLSDASGRIDQRVSAVXXXXXXXXXXXXXXXXXXXXAKGPTAANIKRRAMDTLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTTVAAMKVAASTLKAETKKLNIDSIEDTQDDLGDMMEDMNEINEMMGRSYGVPDEMDEEDLDAELACLDDELEGIEAGEE-AEASYLGPAGLPVEPSAEPAGANPSAALPADGGGMDDFGLPVAP 226          
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A835ZMU4_9STRA (Snf7 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMU4_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.910e-58
Identity = 116/204 (56.86%), Postives = 144/204 (70.59%), Query Frame = 1
Query:  655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELAC------------LDDELEGLDDLEEDATPAYGQPA 1230
            M R+FGKKK+T PAPSLS+AG RVDER          LD ELL++++AL KAKG  A NIK+RAM+TLKRKKMYE QRDQ+AGQQFNIEQT+F IDSIKDT TTV AMK A K +K E KK+NI+++E+  DD+      M+EIN++MGRSYNV DE+DE DL+AELAC            +DD+  G+      A P+Y  P+
Sbjct:    1 MNRIFGKKKDTGPAPSLSDAGARVDERTRNLDEKIKVLDQELLRHKHALAKAKGQAAVNIKRRAMETLKRKKMYEAQRDQLAGQQFNIEQTNFTIDSIKDTQTTVQAMKGANKQIKSEFKKMNISEIEDTIDDLAXXXXXMNEINDIMGRSYNVGDEIDEADLDAELACXXXXXXXXXELGIDDDAGGITATAGTARPSYLAPS 204          
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A812Y1R2_SYMMI (CHMP5 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y1R2_SYMMI)

HSP 1 Score: 196 bits (497), Expect = 6.270e-56
Identity = 115/228 (50.44%), Postives = 152/228 (66.67%), Query Frame = 1
Query:  655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDAT---PAYGQP--------ASLPVEPSLVPESTGPTGVDEFGLPV 1305
            M R+FGKKKE  P P L E    ++ RV          D EL  Y+  + KAKG     I++RA++ LKRKKMYEQQRDQ+ GQ FN++Q +FA+++IKDT TTVAAMKDA K LK E  KI++N++E++ DD+ D+ EDM+EI+E +GRSY  PD +DEDDLEAELACL DE +  ++L E+ +   P+Y  P        A LPV     P++  P+GVDEFGLPV
Sbjct:    1 MHRLFGKKKEVAPPPDLGETSKGLNGRVAALDEKIKAADNELRVYKTQIAKAKGPAKAGIQRRAVEVLKRKKMYEQQRDQLCGQAFNLDQAAFAMETIKDTHTTVAAMKDAAKQLKVEHAKIDLNEIEDLNDDLADMFEDMNEISETLGRSYGTPDYIDEDDLEAELACLGDEFD--EELTEEVSLEQPSYLSPSGMPHVPAAGLPVPTIAQPQAPQPSGVDEFGLPV 226          
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A485L0R2_9STRA (Aste57867_14479 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0R2_9STRA)

HSP 1 Score: 195 bits (495), Expect = 9.940e-56
Identity = 117/223 (52.47%), Postives = 145/223 (65.02%), Query Frame = 1
Query:  655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAYGQPA----SLPVEPSLVPESTGPTGVDEFGLPVAP 1311
            M R+FGKKK   P   + +  GRVD RV         L+ ELLKYR  + KAKGA  T+IK+RA+ TLKRKKMYEQQRD MA Q FNIEQ SFAI++ KD+  TV+AMK A   LK E KK N  ++EN+ DDM D+MEDM+EI E++GRSY +  ++DE +LEAEL  L+DE      +EE   PA   PA     LP  PS   +    TGVDE+GLP+AP
Sbjct:    1 MNRIFGKKKPEAPPVDIGDVRGRVDGRVETLDMKIAKLEEELLKYRQQMAKAKGAALTSIKQRALQTLKRKKMYEQQRDAMASQSFNIEQASFAIETAKDSLDTVSAMKSAATQLKAETKKFNFAELENVQDDMADMMEDMNEIQEILGRSYGLGQDVDESELEAELEGLEDEWA----MEEAIAPATSAPAYLATDLPAAPSGQKDKPQATGVDEYGLPMAP 219          
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A6U1ZDH4_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1ZDH4_TRICV)

HSP 1 Score: 193 bits (491), Expect = 3.980e-55
Identity = 119/220 (54.09%), Postives = 152/220 (69.09%), Query Frame = 1
Query:  655 MKRVFGKKKET-VPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATAT-NIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKK-ININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAYGQPASLPVEPSLVPESTGPTGVDEFGLPV 1305
            MKRVFGKKK    PAP+L +A   V +RV         LD EL  Y++ LK  K   A  NI+KRAMD LKRK+MYEQQRD MAGQQFNI+Q +F I+S K +  TVAAMK A   LKK +KK +NI+DVE++ADDM +LMED +EINE M + ++ P ++DE DLEAEL  L+DELE  ++LE DATP+Y Q ++LP +P+  P    P   DE+GLP+
Sbjct:    1 MKRVFGKKKAGGPPAPTLDQASSGVGKRVDSMDAKIAALDKELKGYKDKLKTTKSPAAKKNIQKRAMDVLKRKRMYEQQRDAMAGQQFNIDQAAFGIESAKASVGTVAAMKAANTELKKTIKKDLNIDDVEDLADDMAELMEDFNEINEAMAQKFSTPVDVDEADLEAELDMLEDELED-EELEADATPSYLQESNLPAQPTTAPGEKVPANTDEYGLPM 219          
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A7S4EE62_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EE62_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.920e-54
Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 1
Query:  655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAYGQPASLPVEPSLVPESTGPTG-------VDEFGLPVA 1308
            M+R+FG +K   PAPSL +A  R+DER          LD EL  Y+  LKKA+GA    +K+RAM  L+RK+MYEQQRDQ+AGQ FN+EQT+FAIDS+KDT TTV AMK A K LKKEVKK++++ +E++ DD+         + +V+G+SY + D++D+ DL+AEL  L D+ + + D   DATPAY QPA    +PSL+P+   PT        VDEFGLPVA
Sbjct:    1 MRRIFGARKAKAPAPSLGDASQRLDERTTALDEKIRKLDIELAGYKEKLKKARGAAQQTLKRRAMGVLRRKRMYEQQRDQLAGQAFNVEQTNFAIDSVKDTLTTVQAMKTASKTLKKEVKKVDLSQIEDLQDDLAXXXXXXXXVQDVLGQSYGIGDDIDDADLDAELDALGDDFDDVADA--DATPAYLQPA----DPSLMPDQ--PTDAPVQADDVDEFGLPVA 217          
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: W4HCB2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HCB2_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.610e-53
Identity = 111/223 (49.78%), Postives = 146/223 (65.47%), Query Frame = 1
Query:  655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAYGQPA----SLPVEPSLVPESTGPTGVDEFGLPVAP 1311
            M R+FGKKK   P  ++++  GRV+ RV         L+ EL KYR  + KAKG   T+IK+RA+ TLKRKKMYEQQRD MA Q FNIEQ SFAI++ KD+  TV+AMK A   LK E KK N  ++EN+ DDM D+M+DM+EI E++GRSY V  ++DE +LEAEL  L+DE      +EE   P +  P+     LP  P+ V ++    GVDE+GLP+AP
Sbjct:    1 MNRIFGKKKPEAPQVNITDVHGRVEGRVDNLDMKISKLEEELQKYRQQMAKAKGPALTSIKQRALQTLKRKKMYEQQRDSMAAQSFNIEQASFAIETAKDSLDTVSAMKSAATQLKAETKKFNFAELENVQDDMADMMDDMNEIQEILGRSYGVGQDIDESELEAELEGLEDEWA----MEEAVAPQHAAPSYLATDLPAAPTGVKDTPTAAGVDEYGLPLAP 219          
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A7S3K2P3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2P3_9STRA)

HSP 1 Score: 187 bits (476), Expect = 8.460e-53
Identity = 112/225 (49.78%), Postives = 151/225 (67.11%), Query Frame = 1
Query:  655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEE-DATPAYGQPASLPVEPSLVPESTGP------TGVDEFGLPVA 1308
            MKR+FG+KK+  P P+L +AG +VD RV         L+ EL  Y+  LK+A+G     +K+RAM  LKRKKMYEQQRDQ+AGQ FNIEQT+F IDS+KDT TTV AMK A K LK E KK+NI+ ++++ D         +E+ +V+GRSY+V +++DE DL+AEL  L D+L+   +L++ D+TPAY QPA    EP+ +PE          + VDEFGLPVA
Sbjct:   10 MKRIFGQKKDVAPPPTLGDAGAKVDSRVAALDEKIKKLEVELSGYKEKLKRARGPAQKTLKQRAMGVLKRKKMYEQQRDQLAGQAFNIEQTNFTIDSVKDTITTVDAMKAASKTLKTEFKKVNIDKIDDLQDXXXXXXXXXNEVQDVLGRSYDVGEDIDEADLDAELEALGDDLDAELELDDADSTPAYLQPA----EPTNLPEXXXXXXXAPESAVDEFGLPVA 230          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTZ1_ECTSI5.190e-10274.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2FVB6_9STRA7.520e-7558.30Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2AMY1_9STRA2.450e-7464.76Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835ZMU4_9STRA2.910e-5856.86Snf7 family n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A812Y1R2_SYMMI6.270e-5650.44CHMP5 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A485L0R2_9STRA9.940e-5652.47Aste57867_14479 protein n=1 Tax=Aphanomyces stella... [more]
A0A6U1ZDH4_TRICV3.980e-5554.09Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7S4EE62_9STRA1.920e-5450.22Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
W4HCB2_9STRA1.610e-5349.78Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A7S3K2P3_9STRA8.460e-5349.78Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8022contigH-paniculata_contig8022:4046..8397 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score316.2
Seed ortholog evalue1.2e-83
Seed eggNOG ortholog2880.D8LTZ1
Preferred nameCHMP5
KEGG rclassRC00918,RC01781
KEGG koko:K01698,ko:K12198
KEGG ReactionR00036
KEGG Pathwayko00860,ko01100,ko01110,ko01120,ko04144,ko04217,map00860,map01100,map01110,map01120,map04144,map04217
KEGG ModuleM00121,M00412
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000815,GO:0000819,GO:0000920,GO:0001919,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005770,GO:0005771,GO:0005773,GO:0005774,GO:0005829,GO:0006810,GO:0006886,GO:0006996,GO:0006997,GO:0007032,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0007049,GO:0007059,GO:0007080,GO:0007088,GO:0007346,GO:0008104,GO:0008150,GO:0008333,GO:0009987,GO:0010008,GO:0010256,GO:0010564,GO:0010824,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0019058,GO:0019068,GO:0019222,GO:0022402,GO:0022411,GO:0022607,GO:0023051,GO:0030447,GO:0031090,GO:0031323,GO:0031410,GO:0031982,GO:0032509,GO:0032510,GO:0032511,GO:0032886,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0034613,GO:0036257,GO:0036258,GO:0036452,GO:0040007,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044087,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045324,GO:0046605,GO:0046755,GO:0046907,GO:0048284,GO:0048285,GO:0050000,GO:0050789,GO:0050794,GO:0051128,GO:0051179,GO:0051234,GO:0051276,GO:0051301,GO:0051303,GO:0051310,GO:0051493,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051726,GO:0051783,GO:0060236,GO:0060255,GO:0061024,GO:0061025,GO:0061763,GO:0065007,GO:0070507,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0071985,GO:0080171,GO:0090169,GO:0090174,GO:0090224,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098813,GO:0098852,GO:0140014,GO:1901673,GO:1902115,GO:1903047,GO:1904896,GO:1904903
EggNOG free text desc.vacuolar transport
EggNOG OGsKOG1655@1,KOG1655@2759
Ec32 ortholog descriptionSnf7 family protein
Ec32 orthologEc-12_003810.1
EC4.2.1.24
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Exons5
Model size1522
Cds size690
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931003.1363-UTR-H-paniculata_contig8022:4045..46991622931003.1363-UTR-H-paniculata_contig8022:4045..4699Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8022 4046..4699 +
1691481546.4147403-UTR-H-paniculata_contig8022:4045..46991691481546.4147403-UTR-H-paniculata_contig8022:4045..4699Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8022 4046..4699 +
1622931003.2430253-UTR-H-paniculata_contig8022:8219..83971622931003.2430253-UTR-H-paniculata_contig8022:8219..8397Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8022 8220..8397 +
1691481546.480051-UTR-H-paniculata_contig8022:8219..83971691481546.480051-UTR-H-paniculata_contig8022:8219..8397Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8022 8220..8397 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931003.1541266-CDS-H-paniculata_contig8022:4699..48011622931003.1541266-CDS-H-paniculata_contig8022:4699..4801Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8022 4700..4801 +
1691481546.4269662-CDS-H-paniculata_contig8022:4699..48011691481546.4269662-CDS-H-paniculata_contig8022:4699..4801Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8022 4700..4801 +
1622931003.1754303-CDS-H-paniculata_contig8022:5619..58291622931003.1754303-CDS-H-paniculata_contig8022:5619..5829Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8022 5620..5829 +
1691481546.436969-CDS-H-paniculata_contig8022:5619..58291691481546.436969-CDS-H-paniculata_contig8022:5619..5829Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8022 5620..5829 +
1622931003.1953027-CDS-H-paniculata_contig8022:6765..69111622931003.1953027-CDS-H-paniculata_contig8022:6765..6911Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8022 6766..6911 +
1691481546.4474468-CDS-H-paniculata_contig8022:6765..69111691481546.4474468-CDS-H-paniculata_contig8022:6765..6911Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8022 6766..6911 +
1622931003.2090309-CDS-H-paniculata_contig8022:7586..76531622931003.2090309-CDS-H-paniculata_contig8022:7586..7653Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8022 7587..7653 +
1691481546.4586058-CDS-H-paniculata_contig8022:7586..76531691481546.4586058-CDS-H-paniculata_contig8022:7586..7653Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8022 7587..7653 +
1622931003.2257912-CDS-H-paniculata_contig8022:8054..82191622931003.2257912-CDS-H-paniculata_contig8022:8054..8219Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8022 8055..8219 +
1691481546.4695394-CDS-H-paniculata_contig8022:8054..82191691481546.4695394-CDS-H-paniculata_contig8022:8054..8219Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8022 8055..8219 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8022.16045.1prot_H-paniculata_contig8022.16045.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8022 4700..8219 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8022.16045.1

>prot_H-paniculata_contig8022.16045.1 ID=prot_H-paniculata_contig8022.16045.1|Name=mRNA_H-paniculata_contig8022.16045.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
MKRVFGKKKETVPAPSLSEAGGRVDERVGKIDEKIKGLDAELLKYRNALK
KAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKD
TATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGR
SYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAYGQPASLPVEPSL
VPESTGPTGVDEFGLPVAPTPAEPTAQRV*
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mRNA from alignment at H-paniculata_contig8022:4046..8397+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8022.16045.1 ID=mRNA_H-paniculata_contig8022.16045.1|Name=mRNA_H-paniculata_contig8022.16045.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4352bp|location=Sequence derived from alignment at H-paniculata_contig8022:4046..8397+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGACTTGTGTGCGCGGTGGGTGTGGCAATGCACCCAAGCTTACATCAGC AAATTGTGTGCTCTACGGGTCTGCAGGTGACAATCATAGTTCCTTGGTCC ATCGTTTGTGCAGCAAAAACGATACAACAGTACATCGCACGAAAGCCACT ATCGTACCAAGGAAATCCCAGCACAATAAAGCCCAACAATAGAGGCGCAC CTGTGTTGTTAAACGGACCCCCCAGCAGCATCAGCGATCCCAAGAAGATA TTTATCCGCAGCGCTGTTCTCCTCTTGCGTTGGCCGCGACTTCTTCCACC TAACAACGTAATCGTCTTCATTTCACGAAAAAATAGAGAATTTTTGCGTT CGTCCATGGTTCGGGTGGGTAGGCCGTACGGTGACTTTCACCTTACACAA CGGATATACGATCGAAATATGTAGAGACTTGATGGGCACCGCCGAGACCT GTCAACATCGATATTGTTCTAGGAGCGTCACACGCGATGTGAGGTGGGTC ATTGGATTATGACAATATTAGCGAGTAGCTCATGTGAGACCGAGCTCCTC ACTCGAGAGTCTAGACATCTTACTCTCTGCTGATCTGTGTTGAATTTAGT CCGTTGCTAGTACGGCACTATCTGATCCACGAAACAGGCGCCTGAAAGCT AACCATGAAAAGGGTATTTGGAAAGAAGAAAGAGACGGTACCAGCGCCGT CTCTCAGTGAAGCGGGAGGGCGGGTTGATGAGAGGGTTGGCAAAATCGAT GAAAAGGTGGGCAACTGATGATAAGACCTGCTCTGCTGTGTAAGTTTCGA TTTGCACGCACGGCAAGACCGAAGGCAAGTTAAGACTATTTGAGTTTATA CGATAGGTTTACGGCTGTTGCTATGTTATGCTATGCTGATTTTCCAAGAA GTTCGAATCAAGGAAGATGACACATGGTTCTGTCGAATCAAGCACTGTAT TGTTTGACTGTAGCAGCACATTGCGATGGATGTGCGGGCTTTCGCATTAC ATATACAGTTCTTGTACATACTAACAGTCAATGATGGGCATCCAAACAGC GTGAATTAACATAGCGAGTGAATGCAACCTGTCCGACAGCTTTCCCCCTG CTTGTCTGTCTGCGTCTCTCTCTCTCGCTTGTGGTATCTATGCTTAACGT GTTGCCAGGGACGTGACCACCCGTCAAAAATACAAATATCCACATAAAAC ATCACCCGCTCATCTGCTGTTGATAAATACGCGGGGCACGTTCGATGATC CAATGAAATATACTCGTTTCTACTGCACGGAACAGGGCAAACGATATAAC TGGCATTTCGTCGCTTCCTTCTGGGGCAACACGTCGCCTATTCGCACCGC AATGTGTCTTTACATCGACACAAGTAGTGCTGCTGCGTTCAAGCAATGAA AAAAGGTCTTTCCAGAGAACTCCTCACTTTACTGTACCCTTTGCGCCCAT GGTCTCTATCCACGGTCCTTGCTGTTTGTGTAGTCACACGTGGTTTCTTT TTCATTACGATGTGAGCCCCCTAACTCGTGCAAACGACCCAATCCATTTC GCCCTGTGCACGTTCAATGCACAGATCAAGGGGCTTGACGCGGAGCTACT GAAGTACCGAAACGCGCTTAAAAAGGCCAAAGGGGCGACGGCTACAAACA TCAAGAAGCGAGCCATGGACACCTTGAAGCGCAAGAAAATGTACGAGCAG CAGCGAGATCAGATGGCGGGGCAGCAGTTCAACATTGAGCAGACCAGCTT TGCGATCGATTCGATCAAGGACACGGCCACCACGGTGAACACAGCAGCTT CATGGGTGTAGGGCTACGACCATGAAACAGTTTAAGGGATAGAGCGCTTA GCAGACCCGCATCATTGCTAAAGAAATAATCTTATCAAAAGTATAAGAGG TGTGGGTCATAGTGCAGTATTTAGTACATGAATAAACAATCAATCGCTCA TCTCTATTCGATAGGCCTGGAATATACCTCGGTATACGAGTATGTGCTCT ACCAAAAGTGGCAGATCTTGTGTGTTAAGGACAATCAGACATGGCTGAAA TATGAGCGAATGTCACAAGGAGGAAACTTACGGACAAACAAAAGTGTATC CCACAGACAACAGCCCCGCGCGCTGAACAGACATAGAGAAGAGAAAAGGT GCTGGATCACACTACCAACATCAAGGTCCGATCGCCGCCGATTTAGCGGT GTTTGGTTGAGTGTGGTACTCGAAATGATTACAAAACTGCGCGCGAAGCT CGACAGACACACAGATGGACCAGGGTTCTGTCTTGGGCCCATGTAGTCTA ATTCGGCATATGTGTGATACTTGTTCCGCCTATTGTTTGTTTTTGCATTT TCACGTTAGTCATGAACATTGGCACTGGCCGCATCGGGAGCTACTGTTGA ACTGCACTGTGTATACTCAGACTGCGGCATGATAGCAGAGATTTTTACTT CGTTGCGTACTCTCGCGTTGTCGTGGTCATGATCTACTTGCTGAACTTTA GGCCTTCGCTCGTTCAATCTTGACCTCATATACCGGACAACTTTTGAACA ATGATTGCCAGTCGATTATTTTTACAGTAATTTGTATGTGTCATTTCCTA CCCTGGTGAATCTTGATCTCACATACCAGGCGACTGGCTGCCAGTCGGGT TTTTTGTACAGTATTGTGTGTGTCTGTCTGTGAACACATATTTTGGATGC TTTGTTTACCCTTTGGTCAGGTGGCCGCAATGAAGGATGCGCAGAAGGGC TTGAAGAAAGAGGTGAAGAAAATCAACATTAACGATGTAGAAAATATGGC GGACGACATGACCGATCTGATGGAAGACATGGACGAAATCAATGAGGTCA TGGGAAGATCGTACAAGTGAGTCTTTCAATTTGTTTTCTTGATAAGCGTA ACGAATCAGCAGGATGTATTGCTATTCTTTTGGGGGGGGGAGCGGCAGAC ATTTGCACCTGTGTACATAAATAATAAAAAAAATGCACTTGTATATTTCG AGGGAGTAAATGTCGCCGAAGAGCAACGCTCTCTCAGTAACCCACGCAAG CCTTGCCTCTTAACTCGGAGGCATTCTTATGTTTTGATGCGATGGTACCT TCAGCAGATGAAATAGTGTAAGTTTATCTGCTTGGTGCTGGATGTCTAGC AGCCTCCTGACGGTGTCATTGCTACAATGCAGTGTTGACACGCTTCCCAT TGAGGAACTCTATAAACCACGATGTTTGTAACGTCGAGATCGCGGGCGCC ATTGGAGTATCGTGCAGCAGAACGGGCACGCTCATCCAGCTGAAATTGAC ACGTGGATACATTGGATGAAGTTCTCTGATTGTGCGTTTGGTTGCGGTCA ATTGTACTGACGCACGATCTGTTTTCTTCATTGGCATCCGATCTTCATCC AGAACTTCATTTTGACCCCTCAGTAACTGTCAGTGGCACGTGCGCTGATT TTTTGTGCAGTGCGTGTAGTTGCGGTAGTTGGTGCTTTCCCCCTTTTGCC ATTTGAATATTGATTGCCCTATTTTTTTTGTCAACTTTCAGCGTTCCGGA CGAGCTCGATGAAGATGATCTCGAGGCGGAGTTGGCATGTCTGGATGACG AATTGGAGGTGCGAAACTGATGAAAGTAGACTCCTATGGACTTTACTGGA AGCACTTTTGGTGGCCACGTACATGAGAGTTCATCAAACACCGCCTCCGT AGCTGTGTTGTGCCCTCAATCTGGTCGAACTTGGTGACCGAGCGTAGCGT TTTATCTTAGTTTCGCCGAAACCTCAAATCGTTGCATTTCGCACCTTGCG CGCGCATGGCATTAGCCGTCTCTCTTCAATCTTCTTTTCGGTGCGTTTGG ATCTCGTGTGATTTGGTCTTCATTTTGCGAATTCTCTTAATTGTCTACTT GTATTTCCTGCTTAATCGTATGTATGTGTGTTTTTTTTGTTCCTCCGCTC ACACCCATTTCTTCTTGGCCACCCTACCCCTTCCCATCCTTTGTCCACCC GCTGTTAAGGGCCTCGACGACCTCGAGGAGGATGCGACGCCAGCCTATGG GCAGCCGGCTAGCCTGCCGGTAGAGCCTTCATTGGTGCCGGAGTCCACGG GTCCTACGGGAGTAGATGAGTTTGGGCTGCCGGTGGCCCCAACGCCGGCG GAGCCGACAGCTCAGCGAGTGTAACGTCACCAGCGAAGGTCGCCTTAGAG ATAATCGTCATATTGACTGTTTTTGTAGGCACTTTGGTTCGGCAGTTTCG CGTGATGAAAAGGCGCATTACGCAAGAATCGCTGTCGAATGTAGCAATGC TTTTATAGTATTTGTACTCTCCTTGTGTGTGTGTGTGTGTGTGTGTGTGT GT
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Coding sequence (CDS) from alignment at H-paniculata_contig8022:4046..8397+

>mRNA_H-paniculata_contig8022.16045.1 ID=mRNA_H-paniculata_contig8022.16045.1|Name=mRNA_H-paniculata_contig8022.16045.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1380bp|location=Sequence derived from alignment at H-paniculata_contig8022:4046..8397+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAAGGGTATTTGGAAAGAAGAAAGAGACGGTACCAGCGCCGTCTCT
CAGTGAAGCGGGAGGGCGGGTTGATGAGAGGGTTGGCAAAATCGATGAAA
AGATGAAAAGGGTATTTGGAAAGAAGAAAGAGACGGTACCAGCGCCGTCT
CTCAGTGAAGCGGGAGGGCGGGTTGATGAGAGGGTTGGCAAAATCGATGA
AAAGATCAAGGGGCTTGACGCGGAGCTACTGAAGTACCGAAACGCGCTTA
AAAAGGCCAAAGGGGCGACGGCTACAAACATCAAGAAGCGAGCCATGGAC
ACCTTGAAGCGCAAGAAAATGTACGAGCAGCAGCGAGATCAGATGGCGGG
GCAGCAGTTCAACATTGAGCAGACCAGCTTTGCGATCGATTCGATCAAGG
ACACGGCCACCACGATCAAGGGGCTTGACGCGGAGCTACTGAAGTACCGA
AACGCGCTTAAAAAGGCCAAAGGGGCGACGGCTACAAACATCAAGAAGCG
AGCCATGGACACCTTGAAGCGCAAGAAAATGTACGAGCAGCAGCGAGATC
AGATGGCGGGGCAGCAGTTCAACATTGAGCAGACCAGCTTTGCGATCGAT
TCGATCAAGGACACGGCCACCACGGTGGCCGCAATGAAGGATGCGCAGAA
GGGCTTGAAGAAAGAGGTGAAGAAAATCAACATTAACGATGTAGAAAATA
TGGCGGACGACATGACCGATCTGATGGAAGACATGGACGAAATCAATGAG
GTCATGGGAAGATCGTACAAGTGGCCGCAATGAAGGATGCGCAGAAGGGC
TTGAAGAAAGAGGTGAAGAAAATCAACATTAACGATGTAGAAAATATGGC
GGACGACATGACCGATCTGATGGAAGACATGGACGAAATCAATGAGGTCA
TGGGAAGATCGTACAACGTTCCGGACGAGCTCGATGAAGATGATCTCGAG
GCGGAGTTGGCATGTCTGGATGACGAATTGGAGCGTTCCGGACGAGCTCG
ATGAAGATGATCTCGAGGCGGAGTTGGCATGTCTGGATGACGAATTGGAG
GGCCTCGACGACCTCGAGGAGGATGCGACGCCAGCCTATGGGCAGCCGGC
TAGCCTGCCGGTAGAGCCTTCATTGGTGCCGGAGTCCACGGGTCCTACGG
GAGTAGATGAGTTTGGGCTGCCGGTGGCCCCAACGCCGGCGGAGCCGACA
GCTCAGCGAGTGTAAGGCCTCGACGACCTCGAGGAGGATGCGACGCCAGC
CTATGGGCAGCCGGCTAGCCTGCCGGTAGAGCCTTCATTGGTGCCGGAGT
CCACGGGTCCTACGGGAGTAGATGAGTTTGGGCTGCCGGTGGCCCCAACG
CCGGCGGAGCCGACAGCTCAGCGAGTGTAA
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