mRNA_H-paniculata_contig8022.16045.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: D8LTZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ1_ECTSI) HSP 1 Score: 319 bits (818), Expect = 5.190e-102 Identity = 184/246 (74.80%), Postives = 201/246 (81.71%), Query Frame = 1
Query: 604 LLVRHYLIHETGA*KLTMKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAY-GQPASLPVEPSLVPESTGPTGVDEFGLPVAPTPAEPTAQR 1338
L V +H + + TMKRVFGKKKE PAPSLSEAGGRVDERV XXXXX LD EL+KYRNALKKAKG TATNIKKRAM+TLKRKKMYE QRDQMAGQQFNIEQT FAIDSIKDTATTVAAMKDA K LK ++KKI+IN VE+M DDM +EIN++MGRSYNV DELDEDDL+AELACLDDEL+ L+ LEED P+Y QPASLP EPSLVPESTGPTGVDEFGLPV P PA P +R
Sbjct: 58 LFVGTLSLHPSRGRRSTMKRVFGKKKEKGPAPSLSEAGGRVDERVAKIXXXXXGLDQELVKYRNALKKAKGPTATNIKKRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXXNEINDIMGRSYNVGDELDEDDLDAELACLDDELDALEGLEEDTGPSYVAQPASLPQEPSLVPESTGPTGVDEFGLPVNPAPARPAQER 303
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A7S2FVB6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVB6_9STRA) HSP 1 Score: 246 bits (627), Expect = 7.520e-75 Identity = 144/247 (58.30%), Postives = 169/247 (68.42%), Query Frame = 1
Query: 601 PLLVRHYLIH---ETGA*KLTMKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAYGQPASLPVEPSLVPESTGPT-------GVDEFGLPVAP 1311
P LVR L H + M R+FGKKK+ P PSL++A GR+D RV LD EL KY+ LKKAKG TA NIK+RAM+TLKRKKMYEQQRDQMAGQ FNIEQTSFAIDSIKDT TTVAAMKDA K LK E KK+NI+ +E+ IN++MGR+Y +PDE+DE DL+AELACL+DELEGL++ E +A P+Y QPA +PVEPS VP GVD FGLPVAP
Sbjct: 6 PELVRLVLAHLRRRASDLRAEMNRIFGKKKDVAPPPSLTDASGRIDSRVQAMDEKIAKLDLELRKYKEQLKKAKGPTAANIKRRAMETLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTTVAAMKDAAKTLKAETKKLNIDQIEDTQXXXXXXXXXXXXINDMMGRAYGMPDEVDEADLDAELACLEDELEGLEEGETEAAPSYLQPAGMPVEPSAVPAGAPAADAAAEADGVDAFGLPVAP 252
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A7S2AMY1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMY1_9STRA) HSP 1 Score: 243 bits (621), Expect = 2.450e-74 Identity = 147/227 (64.76%), Postives = 169/227 (74.45%), Query Frame = 1
Query: 655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAYGQPASLPVEPSLVPESTGPT--------GVDEFGLPVAP 1311
M R+FGKKK T PAPSLS+A GR+D+RV XXXXXX AKG TA NIK+RAMDTLKRKKMYEQQRDQMAGQ FNIEQTSFAIDSIKDT TTVAAMK A LK E KK+NI+ +E+ DD+ D+MEDM+EINE+MGRSY VPDE+DE+DL+AELACLDDELEG++ EE A +Y PA LPVEPS P P+ G+D+FGLPVAP
Sbjct: 1 MNRIFGKKKPTAPAPSLSDASGRIDQRVSAVXXXXXXXXXXXXXXXXXXXXAKGPTAANIKRRAMDTLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTTVAAMKVAASTLKAETKKLNIDSIEDTQDDLGDMMEDMNEINEMMGRSYGVPDEMDEEDLDAELACLDDELEGIEAGEE-AEASYLGPAGLPVEPSAEPAGANPSAALPADGGGMDDFGLPVAP 226
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A835ZMU4_9STRA (Snf7 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMU4_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.910e-58 Identity = 116/204 (56.86%), Postives = 144/204 (70.59%), Query Frame = 1
Query: 655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELAC------------LDDELEGLDDLEEDATPAYGQPA 1230
M R+FGKKK+T PAPSLS+AG RVDER LD ELL++++AL KAKG A NIK+RAM+TLKRKKMYE QRDQ+AGQQFNIEQT+F IDSIKDT TTV AMK A K +K E KK+NI+++E+ DD+ M+EIN++MGRSYNV DE+DE DL+AELAC +DD+ G+ A P+Y P+
Sbjct: 1 MNRIFGKKKDTGPAPSLSDAGARVDERTRNLDEKIKVLDQELLRHKHALAKAKGQAAVNIKRRAMETLKRKKMYEAQRDQLAGQQFNIEQTNFTIDSIKDTQTTVQAMKGANKQIKSEFKKMNISEIEDTIDDLAXXXXXMNEINDIMGRSYNVGDEIDEADLDAELACXXXXXXXXXELGIDDDAGGITATAGTARPSYLAPS 204
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A812Y1R2_SYMMI (CHMP5 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y1R2_SYMMI) HSP 1 Score: 196 bits (497), Expect = 6.270e-56 Identity = 115/228 (50.44%), Postives = 152/228 (66.67%), Query Frame = 1
Query: 655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDAT---PAYGQP--------ASLPVEPSLVPESTGPTGVDEFGLPV 1305
M R+FGKKKE P P L E ++ RV D EL Y+ + KAKG I++RA++ LKRKKMYEQQRDQ+ GQ FN++Q +FA+++IKDT TTVAAMKDA K LK E KI++N++E++ DD+ D+ EDM+EI+E +GRSY PD +DEDDLEAELACL DE + ++L E+ + P+Y P A LPV P++ P+GVDEFGLPV
Sbjct: 1 MHRLFGKKKEVAPPPDLGETSKGLNGRVAALDEKIKAADNELRVYKTQIAKAKGPAKAGIQRRAVEVLKRKKMYEQQRDQLCGQAFNLDQAAFAMETIKDTHTTVAAMKDAAKQLKVEHAKIDLNEIEDLNDDLADMFEDMNEISETLGRSYGTPDYIDEDDLEAELACLGDEFD--EELTEEVSLEQPSYLSPSGMPHVPAAGLPVPTIAQPQAPQPSGVDEFGLPV 226
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A485L0R2_9STRA (Aste57867_14479 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0R2_9STRA) HSP 1 Score: 195 bits (495), Expect = 9.940e-56 Identity = 117/223 (52.47%), Postives = 145/223 (65.02%), Query Frame = 1
Query: 655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAYGQPA----SLPVEPSLVPESTGPTGVDEFGLPVAP 1311
M R+FGKKK P + + GRVD RV L+ ELLKYR + KAKGA T+IK+RA+ TLKRKKMYEQQRD MA Q FNIEQ SFAI++ KD+ TV+AMK A LK E KK N ++EN+ DDM D+MEDM+EI E++GRSY + ++DE +LEAEL L+DE +EE PA PA LP PS + TGVDE+GLP+AP
Sbjct: 1 MNRIFGKKKPEAPPVDIGDVRGRVDGRVETLDMKIAKLEEELLKYRQQMAKAKGAALTSIKQRALQTLKRKKMYEQQRDAMASQSFNIEQASFAIETAKDSLDTVSAMKSAATQLKAETKKFNFAELENVQDDMADMMEDMNEIQEILGRSYGLGQDVDESELEAELEGLEDEWA----MEEAIAPATSAPAYLATDLPAAPSGQKDKPQATGVDEYGLPMAP 219
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A6U1ZDH4_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1ZDH4_TRICV) HSP 1 Score: 193 bits (491), Expect = 3.980e-55 Identity = 119/220 (54.09%), Postives = 152/220 (69.09%), Query Frame = 1
Query: 655 MKRVFGKKKET-VPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATAT-NIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKK-ININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAYGQPASLPVEPSLVPESTGPTGVDEFGLPV 1305
MKRVFGKKK PAP+L +A V +RV LD EL Y++ LK K A NI+KRAMD LKRK+MYEQQRD MAGQQFNI+Q +F I+S K + TVAAMK A LKK +KK +NI+DVE++ADDM +LMED +EINE M + ++ P ++DE DLEAEL L+DELE ++LE DATP+Y Q ++LP +P+ P P DE+GLP+
Sbjct: 1 MKRVFGKKKAGGPPAPTLDQASSGVGKRVDSMDAKIAALDKELKGYKDKLKTTKSPAAKKNIQKRAMDVLKRKRMYEQQRDAMAGQQFNIDQAAFGIESAKASVGTVAAMKAANTELKKTIKKDLNIDDVEDLADDMAELMEDFNEINEAMAQKFSTPVDVDEADLEAELDMLEDELED-EELEADATPSYLQESNLPAQPTTAPGEKVPANTDEYGLPM 219
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A7S4EE62_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EE62_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.920e-54 Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 1
Query: 655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAYGQPASLPVEPSLVPESTGPTG-------VDEFGLPVA 1308
M+R+FG +K PAPSL +A R+DER LD EL Y+ LKKA+GA +K+RAM L+RK+MYEQQRDQ+AGQ FN+EQT+FAIDS+KDT TTV AMK A K LKKEVKK++++ +E++ DD+ + +V+G+SY + D++D+ DL+AEL L D+ + + D DATPAY QPA +PSL+P+ PT VDEFGLPVA
Sbjct: 1 MRRIFGARKAKAPAPSLGDASQRLDERTTALDEKIRKLDIELAGYKEKLKKARGAAQQTLKRRAMGVLRRKRMYEQQRDQLAGQAFNVEQTNFAIDSVKDTLTTVQAMKTASKTLKKEVKKVDLSQIEDLQDDLAXXXXXXXXVQDVLGQSYGIGDDIDDADLDAELDALGDDFDDVADA--DATPAYLQPA----DPSLMPDQ--PTDAPVQADDVDEFGLPVA 217
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: W4HCB2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HCB2_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.610e-53 Identity = 111/223 (49.78%), Postives = 146/223 (65.47%), Query Frame = 1
Query: 655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEEDATPAYGQPA----SLPVEPSLVPESTGPTGVDEFGLPVAP 1311
M R+FGKKK P ++++ GRV+ RV L+ EL KYR + KAKG T+IK+RA+ TLKRKKMYEQQRD MA Q FNIEQ SFAI++ KD+ TV+AMK A LK E KK N ++EN+ DDM D+M+DM+EI E++GRSY V ++DE +LEAEL L+DE +EE P + P+ LP P+ V ++ GVDE+GLP+AP
Sbjct: 1 MNRIFGKKKPEAPQVNITDVHGRVEGRVDNLDMKISKLEEELQKYRQQMAKAKGPALTSIKQRALQTLKRKKMYEQQRDSMAAQSFNIEQASFAIETAKDSLDTVSAMKSAATQLKAETKKFNFAELENVQDDMADMMDDMNEIQEILGRSYGVGQDIDESELEAELEGLEDEWA----MEEAVAPQHAAPSYLATDLPAAPTGVKDTPTAAGVDEYGLPLAP 219
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Match: A0A7S3K2P3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2P3_9STRA) HSP 1 Score: 187 bits (476), Expect = 8.460e-53 Identity = 112/225 (49.78%), Postives = 151/225 (67.11%), Query Frame = 1
Query: 655 MKRVFGKKKETVPAPSLSEAGGRVDERVXXXXXXXXXLDAELLKYRNALKKAKGATATNIKKRAMDTLKRKKMYEQQRDQMAGQQFNIEQTSFAIDSIKDTATTVAAMKDAQKGLKKEVKKININDVENMADDMTDLMEDMDEINEVMGRSYNVPDELDEDDLEAELACLDDELEGLDDLEE-DATPAYGQPASLPVEPSLVPESTGP------TGVDEFGLPVA 1308
MKR+FG+KK+ P P+L +AG +VD RV L+ EL Y+ LK+A+G +K+RAM LKRKKMYEQQRDQ+AGQ FNIEQT+F IDS+KDT TTV AMK A K LK E KK+NI+ ++++ D +E+ +V+GRSY+V +++DE DL+AEL L D+L+ +L++ D+TPAY QPA EP+ +PE + VDEFGLPVA
Sbjct: 10 MKRIFGQKKDVAPPPTLGDAGAKVDSRVAALDEKIKKLEVELSGYKEKLKRARGPAQKTLKQRAMGVLKRKKMYEQQRDQLAGQAFNIEQTNFTIDSVKDTITTVDAMKAASKTLKTEFKKVNIDKIDDLQDXXXXXXXXXNEVQDVLGRSYDVGEDIDEADLDAELEALGDDLDAELELDDADSTPAYLQPA----EPTNLPEXXXXXXXAPESAVDEFGLPVA 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8022.16045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8022.16045.1 >prot_H-paniculata_contig8022.16045.1 ID=prot_H-paniculata_contig8022.16045.1|Name=mRNA_H-paniculata_contig8022.16045.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp MKRVFGKKKETVPAPSLSEAGGRVDERVGKIDEKIKGLDAELLKYRNALKback to top mRNA from alignment at H-paniculata_contig8022:4046..8397+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8022.16045.1 ID=mRNA_H-paniculata_contig8022.16045.1|Name=mRNA_H-paniculata_contig8022.16045.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4352bp|location=Sequence derived from alignment at H-paniculata_contig8022:4046..8397+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8022:4046..8397+ >mRNA_H-paniculata_contig8022.16045.1 ID=mRNA_H-paniculata_contig8022.16045.1|Name=mRNA_H-paniculata_contig8022.16045.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1380bp|location=Sequence derived from alignment at H-paniculata_contig8022:4046..8397+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |