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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 837 |
| Cds size | 795 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig801.16037.1 >prot_H-paniculata_contig801.16037.1 ID=prot_H-paniculata_contig801.16037.1|Name=mRNA_H-paniculata_contig801.16037.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=265bp
MVDGAMVSKSMMRVRKRMTPMTWSQPIEQTGENCPLDDADGILGKSSGQE
QGQGNSTNGFWSRSSGGLKSRVRGVLWARFVGVATLLFFSGFFCSQVASS
VLVAMGTTVEMMPWNQTLYEASLEKDEIPIRRLHAALEKQSYTSFSLKDL
MKRKSSWGIGPERTRGVADVTAILMDSPYLKEQLDMLLVARTKPAKVWVV
MPAKDAAATSGIVSKYKHGKLFGDRLDTISSDLFSDQPGVGGGDSGFFNA
GLARFQLAIQADTK* back to topmRNA from alignment at H-paniculata_contig801:22573..30834+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig801.16037.1 ID=mRNA_H-paniculata_contig801.16037.1|Name=mRNA_H-paniculata_contig801.16037.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8262bp|location=Sequence derived from alignment at H-paniculata_contig801:22573..30834+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAAGGAAGGAGAAGCTGGTGACAGCTACAAAGAACCACCCCGATGGTAGA
TGGTGCCATGGTTTCCAAATCGATGATGAGGGTACGGAAACGAATGACTC
CTATGACCTGGAGCCAGCCAATAGAACAAACAGGCGAGAACTGTCCACTC
GATGATGCTGATGGAATATTGGGTAAGAGCTCGGGACAGGAGCAAGGGCA
AGGCAACAGCACGAATGGTTTCTGGAGCAGGTCCAGTGGCGGCTTGAAGA
GCAGAGTGAGGGGGGTATTGTGGGCAAGATTTGTGGGCGTGGCAACTTTG
CTGTTCTTTTCCGGCTTTTTCTGCTCTCAAGGTAAATGCAGTCAGTAGCA
GCGATGGTATTTCGTTGTTTTTCTCGTTTAGGTTGTGGCTGAGAAACGGA
CACTTGGTACTAGATGAACAATTGTTCGTGAAGTTTGATACACAACGTTT
CCTCGTCACTGGTCATCCTTGTACGAGGCTACGTGCTTAGCAGAATAAGA
ACCTTCCCAGTAGATGTGTGTGCCTGCTATTTTATTTCTATTTGTTCCGG
GTCGATGATTACCACGATCATCATTATTATAAATAAATGCAGCAATCCCC
GAAAAATGATCCGATTCCTCTTCAGTGCTTTCTGTATCACGCCAATTGTG
ACTGCTCCGTTTCGGTGAAAATTCTCTGAAAAAAAATAGTCTTATCTTCA
CAGACAGGGCAGCGAAGAATTTAATTGGCGACCTCCAAATATTATCTGTC
ATGATCGCACCCACCACCAAGAAAATAACTAAATGCGTATTAGAGAGCTC
TACAAATGTTCATGTTGTATTTTTATTTTGTATCCCCCACTATCTCACAA
TGATAAGAGTGTGGTGCCACCTGATGTACGGCTCACGCGTCCATGCTCCG
CGGTGAGGTAGAACCGAGAAAAACCAACGCCCCAAGTTTACACCAAGTAC
ATATTTGAGCCCATCACTAATCGAAAAAGAAGCCAAGTTGGCCTCACACT
GTACGGAGCAAATCCCATCGGGTTGTCGTATTATCAAGCAATAGCTGAAT
CGCACCCAAGTAAGGTCTCTGAAAATAGGATGCCTAATAACGACGGGAAA
TTTCTGCTACTCAACAAGAATTTTTTGTGGTCCCCAAGCACCGAAAATTC
CTCAACCTATTTAGCCGAAATACCGTTTCGGAACAAGAACAAACATGACA
CTTCATCCCGAAACGGAGAAGGGCGGTGTTTGCATAGCGGGAGGGGGGGC
GTAGACAGTTTCTTCATGCCGGAAGTGTCAGACCACGGGCGACAGCTCCC
CGAGGGGGTAGAGCTTTGCTCCTGCCAGAGCGATAGATACCCGATGGTTA
ATCGTTCTTGCCTACGTTGCCAAATGTGGCTTCAAAGTGTCTCACCGGCC
TTATCCCAGGATTAAAATAAAACGCCTCGTCATTGCACCCTGCAATTTTA
CTCCATCTAATAATCACTCTTTAGAAGGGATGGCAGTGATCTGTTTCTGC
CTGTGTGTTTGTGTGTTTTTTCAATTTTTCCATCCGGTTCGAGATTGGTC
AGAGGAGATTTTTGCTTTTCCGGTCCGTTCGCGGTTGATCATGTCATAAT
TTTGCGTGGTCCGGGATCGGCCATTTGTATTACCGTACTCAAAAGCTCCT
CATCTAAACATGTCCGCTGGTCGATCACAGGCAGGTCGAATGTTGGCGTA
CTGATAGTTTCGGACCAGTTTTGTTGCGGTTCGGAATAATATAAAGCGTT
GCGGGGAAAATATTATCGTTTGGGGGTATTGCATCGCGGTTACGGAGCAC
GGCGGGTGTATGGGTTTAAAAGAGGGTGGTGACAAGCTGAATAACCCTCT
CTTGAATTTCAATCCATCAAAACTAGTTCTTCGAGAGAGTAAATGGTGTC
GGACAAATACACTGATGGTCATGGTCATACATTGAGCTCGAAGAAGCCCG
TCCATCTCGGCAAAAAAAAATGTTCAAAACGCTAACATTCGTGGTCGTCC
GCTCGAGCCGGTTCGATTGAAACCCAGGTAGTGTCAATGATATACAGCAT
TGGTAATTTTTCACGTCCCTGTCCAATTTTAATCCCTATGGCATCCGGGG
AAAAAAGACCAAAAAGAGCATCTGAGAGTCCTGCGGCTAAACCACCGCGA
AAAGGGGAGGGGAGGATTTCTGACCTCGTAGTGCTGGACCATGACCGCAG
ACTGTACACGAGAAGCACAGGTTCAGGCCAATCATGCACGTTTATTCCCT
CAACGCCGAATCAAAACTAGTCGTCTCTATACATTACTCAAGCGGTTGAG
GGTGTATGAGTAAAACGTCCACATTTCTTCACATTATATTATATTCGGCC
CCCTGTGTTTTTCACGTTTCATTCGACGGAATTTTGGAAAATGGAGAAAG
CCGAGTCGGCTAAATCTGCCCAGTAAAATCCGAAATAGATGAATGCATGA
TATGAAGCTTTCTAGAGCCTTCATTTTTAGACCAAATATCAAATGTAATA
GAACATGATAGTTGGAGAAGATTTTTCTTTTAACCGGAATAAAAAAACGA
ATAATGGTCATTGTTCAAATTCGGACCCAAAATCACCGAAAACACGCATC
ATTCGCTCCTCGTTATCTGTTTGCTCACTAATTGTTGTTTTGGGCAACAG
CTACTACTGTTGGAATTTCAGATAGTACCATCCATTAGAGCTTTACGTAG
GTAGGAGCAGCGATATAGGCAAATATTTGCTGTTTCCCGTTCGGAAGAAA
AAAAAAAATGAGAATCCCGGCCTTTTGTTGTTACGACGCTGACATTCACT
TAGAACCAAGCAGTCTAGCTTTAGACAGGCGATGACCTGCGCGCCCATGC
TAGTATCAGGATAACTGTACGTGGAGGAGATAGCGATCAATCAAACCAGA
TTTTTGAGTTTCGAAGAAAAACGTTGAGAAGCGCCCATTTTGCACCTATT
TTTTTAAGGGAAATCTGGCAAAGTTCGAGAAAGTTCTCAAAAACCGACAA
CCCGGTCTGATTAAGTAGTAGATGGGGTATTGGTGAGCCCACACACCTAG
TGGTGCTTGAATCCTCCGTGTAGTTCACAAGCTAGAGTCTTTGAAAAACG
GGCAAATTACCTTTCTTGGACATGTACAGATATGTACTGGTTATAGTGCA
AGCGTGGAGTCGTTGTCTCCACATTAGGACGAAACACGGAAATTAAAAAA
AATTCAGGCTTCGTATTTTGGCTGCTGGTACCAATCTGTTCCGCAATAGA
ATCAGAGCACGCGTCGAGAGTTAACGCGATCAACGACAAGATACCACAGT
GCGCCATCTAAATTTTGTGCTTGCATGGCCCAACGTTTGTCGAGGACAGT
TACCCTCATTTTCACAGATAGTCTAATGATTTATCGCCTTGTTTCGGGGA
AATATAATCCCAAGCGGATCCTCACCGACGCTGAAATAGGATTGACTAAG
CGATTAAACGAAGAAATTTTCAAAATTATAGCAAATGGGCTGGCTGATTG
GTCTGTTGGCATTTTACCATGTGATGACGGTGGCGTCGTGCGTGAATGGA
TAATTTTTTTAATTATATGCTCTGGTATGCGGCTTTGTGTGGGATAAGAA
CCGATGCACAGGCACTGTATTTAAAAAAGTAGTCTATTTTTTTCAGGTGA
AGAATAGATGGGAGGAGCAAAGCCTAATGGATTAATGCTTTACCTATGAG
CCTTGTTTCCAAACTGAATATATATGATGCATGGCCAGGGCGGGGAAGGG
AGCATTTATTCACATTTATCGACAAAATTAAATCACTAGGGGGCGGGGTG
GGGGGGGTGTACTCGTGTTGTGCGTGTCGTTTTTAGTTGTTGGGCTATTG
AGCATGCATCCTCGGTAGGAGGGATCTTTGTTCCTGTCAGAGCGATTTCC
GATGGCCAACTGTTATTTCCTTCGTTGCTCAAATATATATTTTTGCCTAT
CCTCTTCACCTCAACCCTCAACTTTCAATTTCCATCTCCTGTAACCGTTA
TGGCCTGTTTTTCACAATCCTGGGCAAAGGGAGGGAAGGGGAGCAATTAC
TTCTGTTATCAAAACGCAGCTATTTGCAGCGAACACGACAGGATATAAAA
CTGACGTCACCAATACACACTAGCATATGAACAGCTGCACACGCTCAAGT
ACGACGTAAGTAGAAGGCGATTGACTGTTTGTGGTGCACTTGTAGTGTGA
ATGGTGACTACTTTCAGGTCATCGTTGTGTGTGTCATGGCGTCATTGTGT
GCCAACTACAATGTCATGCGTCCACGGGAAAATGCAACACATATTTTTTG
CCAAATAAGAGTAAATGTATGCTTGACCACGTGCGGCAGCCTCTACCTGC
TGTCTCGGCCGTACGTCATAAACTGTGATGTGTCTTGTGTTGTGTTTGCC
GCACGGATGGATATATACCGATTTGTTGTGTTCGTTTATCAGTGGCGTCG
TCCGTTTTGGTGGCCATGGGAACAACGGTGGAGATGATGCCATGGAACCA
GACCCTTTACGAGGCTTCTTTGGAGAAAGACGAAATCCCAATTCGTAGAC
TACACGCGGCATTAGAGTGAGTGGCGTAAGGTAAAGATGCCGCTGGGCAG
AGGGGGCTCGCCACAGTCTTGTCATGCACAGAGGAAGCGGATGGTATGTA
GGCACCCTCTCAGCGATGGAGTACCCTCCCCCCACCTTTCACGAAACCTC
TTTTTGACTGTTAAAAAAAGGCAAAAAAATCATTTTGAGGCGTTTTAGCA
TGATTGAGGATGTTCACCTCGATTTTACACCTTTTTTTGCTGTTTTTAAG
TGTACAAACTGAGATTTGAGGCCAGGTGCATAATCTCAACAAAGGTACGA
GGGAGTTATGTAAGCGTCATATATATATATATATATACCTAGTTGCAGTG
AGTGAATTGACTCGTAAATGAGACATGCGGTGGGATAAAGATGAGATATT
TTATTCCTGGGAGGCGTTTCGCGGGTAAGCCATGTTGTGTGATTTAGTAA
TACCACCCTGGGGTCATAGCTCACGTTGTGCCTGTCACCATTACAGTTCC
TTCCCCCTCCCGAAGAGTACAACCCAGTTTAGTCGCTTGAATTATGCATA
GGTATGCATTGCAGAACCCACCCGTGTATGTCTGTATTTGTCAAGAGAAA
TAATGATCGCGAGTAAAACACTTGTGATCTGTAGTCCAGGAGCAGCTAAC
CATTTGTTTACCTTGGCTCTAGCCGTTGCACATACTTTGTGGCTACCTGG
ATAACCTGAAGTGGATCGTTTTTTGTGTTTTTCCCATCATCGAGAGGAAG
AATTAGCGTTTATCTCGAGATGTGGCCCCCACTCGTGTGAACTTTTCTGG
TAGAGCTGGTTGCATGGGAGATTTGGTTTCGAATCGACGGATAAATGCAT
CTCTTCACTTTCGTCGATGGAGAGCTACCTATTTGCCGCTGTTGAGATAG
GCTGGAGACATGGTTCTGCCCACAAGAACTGGTGCAATACTTGTTATCGA
ATAGCTGTTTTTGTTCCGAAACAATCTAATGCGGCGCTAAACGAACTGAA
AAAAATCATCGTTGGGTTATTCGGATCTGCAAGATAACGACTGGAGCATG
ACTGCTTCGCAGATGATAGGGTCAGTCGAATCCGGGTTGGCCTCCTTACG
TTGTAGCATATGTAATATCCGAGCCATTAGATTCCAAACAAGGAGGAGGA
ATGTCAAAACGCCAGTCTGTCCAGGAGATTTTTTTTTTTTTTTTTGCCCT
TGGTATGTATGTTGCTTTAAGCGCGACCTTTTTTCCGCCATGTGTTTGAC
CCTGTTACATAGCGCCCGACGCTAGTTCGGGTTTATAAAATTCATGTGCA
AGCAAACGTCGAAGGCTGCACCAAGTTATTGTGCGCAGGCAAGACCATGC
TAACTTCTCGTCTGTGCTCTGTGGAATGTCTATACGTGGCTCGTTGTCTG
GCTACCTGCGGCGGCTTCCTCGCCCCGTTACTTTTGCTCGTGTCACAGGC
GTTGTTGTTTCTGCCTGTCTTTTTAAGGTGAAATACAGATATGAAGAAGA
AGTTATACATACATGCGCCTTCACATCCTATTGTTTTTGTATGTGCCTGT
ACTCGCGTATTTCACATTTTGAAACTAAGGCTAATACCTCTTTTTTTTGC
TCGCAAATGCAAATGCCCGGAGCCTAAAGTATTCGTATTTTTTCGGGGGG
TGAACCTCGTCTCTCTGTCTCTCTCTCTTTTTGATATTTTGGCTGTTCGT
CAACTTCGTTTTTTATTCGCTTTTTGTCTTCTTGGTGTGATTGGTCGCAA
AAAATCGGAACGACCCATATACCGTGAGACAGGAAACAAAGCTACACAAG
CTTCAGCCTTAAGGATCTCATGAAGAGAAAGTCCAGCTGGGGAATAGGAC
CAGAGCGCACGCGAGGCGTTGCCGACGTAACGGTGAGCAACTTCATCGTT
CTTTCGAATCTCTCTATCAGGTGCTGTGAAATCGGGAGGTAACGTCATCA
CCTGCGATTATTCTAAGGACTATAGCGCTACTGACGAGGAGTAAATAGTG
TGCCGTTAGGAAGATGTTGCTACGGTAAGGAGATCTAAAAAATGGGTTGC
TTCTTTCGACTGCGTAGTATTGATCTCCGTTTCTGGAGATGGTCTTGGCT
GGAAAAACGTTTGCACCTGGTGATACCGATACCTTCGGGTTTTTACGGTA
CTTGTTACGAGAAGGATATGGTGAACTCGGAACAACTATTCTTCGAGTCT
GTACTGGATGGAACTTCTGAAAAACGAGTTTCCGTGCGAGCGCAGCGATG
ATTTGGTGTGTGTGGATCGAGCATAAATCATATAATGGAATACGAATGAC
TGCATGGGCGTAGCCGGGGTTCAATTAGGAGGTACAAGAGAAGTCGCTTC
TCTGGATGGCCGTCGTCGCCACTCCCGTTGTGGATAATGACCATATTAGT
TCAAGACAAGAGAAGGCGACATTAATCGGCGTAGTGCCTTCAGGAACCGA
CTCCTCGTAACGACCAAATGATGCGTTTGCTAACAACCAGTGGTATATAA
TTGGATAATGACTACGTCTGCAGTCTGCAGAATATTTGACGAGCTCTGGA
CAGTTATTCGGTTAGCGTATCTCAGATCGCAATGTAGAGTCGTCCTCCTG
CCGATTAAGATCTAACGAGGATGAAAAAACATGAAAACGCTAAAGGAAAT
GTTACCGTGAGCGGACTGGAGGTGTTTGTGTATGTAGATATGAAGCGGAG
CGCTTTAAGCTTGTGCACGCCTGCAGACCAATCACAGTAAGCATTCTCGT
TCCCTCTAGTTTGTGTCTGTGTGTTTGTTCGGGGTTTTTGCACCTGTTGA
GTCAACACACCTCCTCATAATATTGGATTTAGTGCAGGGCGAGAACTGGC
AATCAAACACCGCGTTCGTTTCGTGAGGAAACAAGCTCTTTGTAATTGAT
TCGGGGGGTAATATGTGTATAACGAGGGTTTATGATGAATGCGATATGCT
TTGGAACGTGACGCGAATGTGCCAACTATTGTTTTATCGGCAGGCGATCT
TGATGGACTCTCCCTACCTGAAGGAACAGCTGGATATGCTCCTCGTGGCA
AGGACGAAGCCCGCGAAGGTAACCGACGCAAAATATCAATGCAAAAAGAG
GCGGAATAGATGTCTGACCTGTAGAGGGTTCATTTTTGAACTCTTTGGGA
ACGAAACTTCGTAATGGTTAAGATATAGTTTGTACTTATGTACTTAATTT
GGTTGTGCTTTTTTTTTTAATATATATATATAGGACGGAGGGATCTTTCA
ATGCAATTCAATTCACATGAAAACTCTCAAGTATATTCGCCTTTTTTTGA
CGGGGCGTTTGTTGTTACTTGATATTCACTGGTGAGAGGTCAATATATAT
ATATATATATATATATATATATATATATATATTTAATTCAATATGTATAT
CTTCACATTTACGTACTTTCTATATTAAATACACATAAGTTGTTGGCTTG
CGGTAAGTTCGTACTAAAAGAATGTTTGAGTTGATTAATGATGTTGCCTT
TACAGGTGTGGGTAGTAATGCCGGCTAAGGATGCGGCCGCGACCAGTGGG
ATCGTGTCCAAGTACAAGCACGGCAAGCTCTTCGGCGACCGTCTTGACAC
CATTAGCTCGGACCTTTTCTCGGATCAACCGGGTGTGGGCGGGGGCGACA
GTGGGTTTTTCAACGCCGGGCTCGCGCGGTTTCAACTGGCGATCCAGGCC
GATACCAAGTGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig801:22573..30834+ >mRNA_H-paniculata_contig801.16037.1 ID=mRNA_H-paniculata_contig801.16037.1|Name=mRNA_H-paniculata_contig801.16037.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1590bp|location=Sequence derived from alignment at H-paniculata_contig801:22573..30834+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTAGATGGTGCCATGGTTTCCAAATCGATGATGAGGGTACGGAAACG
AATGACTCCTATGACCTGGAGCCAGCCAATAGAACAAACAGGCGAGAACT
GTCCACTCGATGATGCTGATGGAATATTGGGTAAGAGCTCGGGACAGGAG
CAAGGGCAAGGCAACAGCACGAATGGTTTCTGGAGCAGGTCCAGTGGCGG
CTTGAAGAGCAGAGTGAGGGGGGTATTGTGGGCAAGATTTGTGGGCGTGG
CAACTTTGCTGTTCTTTTCCGGCTTTTTCTGCTCTCAAGATGGTAGATGG
TGCCATGGTTTCCAAATCGATGATGAGGGTACGGAAACGAATGACTCCTA
TGACCTGGAGCCAGCCAATAGAACAAACAGGCGAGAACTGTCCACTCGAT
GATGCTGATGGAATATTGGGTAAGAGCTCGGGACAGGAGCAAGGGCAAGG
CAACAGCACGAATGGTTTCTGGAGCAGGTCCAGTGGCGGCTTGAAGAGCA
GAGTGAGGGGGGTATTGTGGGCAAGATTTGTGGGCGTGGCAACTTTGCTG
TTCTTTTCCGGCTTTTTCTGCTCTCAAGTGGCGTCGTCCGTTTTGGTGGC
CATGGGAACAACGGTGGAGATGATGCCATGGAACCAGACCCTTTACGAGG
CTTCTTTGGAGAAAGACGAAATCCCAATTCGTAGACTACACGCGGCATTA
GATGGCGTCGTCCGTTTTGGTGGCCATGGGAACAACGGTGGAGATGATGC
CATGGAACCAGACCCTTTACGAGGCTTCTTTGGAGAAAGACGAAATCCCA
ATTCGTAGACTACACGCGGCATTAGAGAAACAAAGCTACACAAGCTTCAG
CCTTAAGGATCTCATGAAGAGAAAGTCCAGCTGGGGAATAGGACCAGAGC
GCACGCGAGGCGTTGCCGACGTAACGGAAACAAAGCTACACAAGCTTCAG
CCTTAAGGATCTCATGAAGAGAAAGTCCAGCTGGGGAATAGGACCAGAGC
GCACGCGAGGCGTTGCCGACGTAACGGCGATCTTGATGGACTCTCCCTAC
CTGAAGGAACAGCTGGATATGCTCCTCGTGGCAAGGACGAAGCCCGCGAA
GGCGATCTTGATGGACTCTCCCTACCTGAAGGAACAGCTGGATATGCTCC
TCGTGGCAAGGACGAAGCCCGCGAAGGTGTGGGTAGTAATGCCGGCTAAG
GATGCGGCCGCGACCAGTGGGATCGTGTCCAAGTACAAGCACGGCAAGCT
CTTCGGCGACCGTCTTGACACCATTAGCTCGGACCTTTTCTCGGATCAAC
CGGGTGTGGGCGGGGGCGACAGTGGGTTTTTCAACGCCGGGCTCGCGCGG
TTTCAACTGGCGATCCAGGCCGATACCAAGTGAGTGTGGGTAGTAATGCC
GGCTAAGGATGCGGCCGCGACCAGTGGGATCGTGTCCAAGTACAAGCACG
GCAAGCTCTTCGGCGACCGTCTTGACACCATTAGCTCGGACCTTTTCTCG
GATCAACCGGGTGTGGGCGGGGGCGACAGTGGGTTTTTCAACGCCGGGCT
CGCGCGGTTTCAACTGGCGATCCAGGCCGATACCAAGTGA back to top
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