mRNA_H-paniculata_contig8007.16034.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8007.16034.1 vs. uniprot
Match: M2UFG2_COCH5 (Uncharacterized protein (Fragment) n=2 Tax=Cochliobolus heterostrophus TaxID=5016 RepID=M2UFG2_COCH5) HSP 1 Score: 68.9 bits (167), Expect = 2.060e-11 Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 1 VTLLLGAYAEVNARDDQRRTPLHYCSEIGSTAVMNT-----SNAKKAAHKGDQCHYSYCLF--------VGAQQELISFKADIDAKDSSLETPLSKAAWAGNVEAVEILLEAGANVD 312
V LLL A+++ARDD+ RTPL++ SE G ++ + K KG ++ C F + + L++ KADIDA+D + TPL A+ G+++ VE LLE GA+V+
Sbjct: 233 VKLLLAKKADIDARDDEWRTPLYFASEGGHLQLVEALLEEGAEVNKQCKKGMTVLHAACRFKSSPPNDNIAVVKLLLAKKADIDARDYQMRTPLYFASEGGHLQLVEALLEEGADVN 349
BLAST of mRNA_H-paniculata_contig8007.16034.1 vs. uniprot
Match: UPI00096AEBCB (uncharacterized protein LOC109586804 n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096AEBCB) HSP 1 Score: 61.2 bits (147), Expect = 7.490e-9 Identity = 38/108 (35.19%), Postives = 55/108 (50.93%), Query Frame = 1
Query: 28 EVNARDDQRRTPLHYCSEIGSTAVMN---TSNAKKAAHKGDQCHYSYCLFVGAQQELISF-----KADIDAKDSSLETPLSKAAWAGNVEAVEILLEAGANVDTRDTD 327
+VN D ++RTPL + GS ++ T+ AK D +C + E++ F D++ KD + TPL A +G+VEAVEILL+ GAN D D D
Sbjct: 12 DVNVSDKRKRTPLFNAVKSGSIEAVDILLTNGAKTDVVSNDGVTLLHCAGESGKVEMLEFWIRRGDYDVNVKDKNNRTPLFNAVTSGSVEAVEILLDNGANTDVVDKD 119
BLAST of mRNA_H-paniculata_contig8007.16034.1 vs. uniprot
Match: A0A1X7TP59_AMPQE (Death domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TP59_AMPQE) HSP 1 Score: 61.2 bits (147), Expect = 1.310e-8 Identity = 38/108 (35.19%), Postives = 55/108 (50.93%), Query Frame = 1
Query: 28 EVNARDDQRRTPLHYCSEIGSTAVMN---TSNAKKAAHKGDQCHYSYCLFVGAQQELISF-----KADIDAKDSSLETPLSKAAWAGNVEAVEILLEAGANVDTRDTD 327
+VN D ++RTPL + GS ++ T+ AK D +C + E++ F D++ KD + TPL A +G+VEAVEILL+ GAN D D D
Sbjct: 417 DVNVSDKRKRTPLFNAVKSGSIEAVDILLTNGAKTDVVSNDGVTLLHCAGESGKVEMLEFWIRRGDYDVNVKDKNNRTPLFNAVTSGSVEAVEILLDNGANTDVVDKD 524
BLAST of mRNA_H-paniculata_contig8007.16034.1 vs. uniprot
Match: A0A3Q4GH46_NEOBR (Protein phosphatase 1, regulatory subunit 16B n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=A0A3Q4GH46_NEOBR) HSP 1 Score: 57.0 bits (136), Expect = 3.920e-7 Identity = 44/121 (36.36%), Postives = 55/121 (45.45%), Query Frame = 1
Query: 1 VTLLLGAYAEVNARDDQRRTPLHY---CSEIGSTAVMNTSNAKKAAHKGDQCHYSYC-----LFVGAQQELISFKADIDAKDS---SLETPLSKAAWAGNVEAVEILLEAGANVDTRDTDG 330
V LLL A VNA+D++ TPLH C G ++ + K +Y C L VG Q +I K S SL L AA G +A E+LLE GA VD RD+DG
Sbjct: 107 VKLLLDRGASVNAQDNELWTPLHAAATCGHAGLVKILIFGGYMLSYQKAPVAYYKVCIEEFHLSVGLPQTIILIVDYTGGKQSLFPSLLLQLHIAAANGYAQAAELLLEGGARVDLRDSDG 227
BLAST of mRNA_H-paniculata_contig8007.16034.1 vs. uniprot
Match: UPI000349C9DD (ankyrin repeat domain-containing protein n=1 Tax=Baaleninema simplex TaxID=2862350 RepID=UPI000349C9DD) HSP 1 Score: 54.7 bits (130), Expect = 2.560e-6 Identity = 37/111 (33.33%), Postives = 56/111 (50.45%), Query Frame = 1
Query: 1 VTLLLGAYAEVNARDDQRRTPLHYCSEIGSTAVMNTSNAKKAAHKG----DQCHYSYCLFVGAQQELISFKADIDAKDSSLETPLSKAAWAGNVEAVEILLEAGANVDTRD 321
+ LLL A NA+ T L +EIG A++ A A+H G + C + + Q L++ D + D T L++AA +G VEA+ +LLEAGA+V+ D
Sbjct: 356 IELLLNGGANPNAKSQYGDTALTRAAEIGDRAIVERLQAAGASHDGLDVIELCIAAEQGDLDRLQRLLAAGVDPNRADFRRRTALAQAAGSGQVEAMRVLLEAGADVNGSD 466
BLAST of mRNA_H-paniculata_contig8007.16034.1 vs. uniprot
Match: A0A812JPK8_9DINO (INVS protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812JPK8_9DINO) HSP 1 Score: 53.5 bits (127), Expect = 6.940e-6 Identity = 38/116 (32.76%), Postives = 58/116 (50.00%), Query Frame = 1
Query: 16 GAYAEVNARDDQRRTPLHYCSEIGSTAVMNTSNAKKAAHKGDQCHYS--------------YCLFV---GAQQELISFKADIDAKDSSLETPLSKAAWAGNVEAVEILLEAGANVD 312
+ +V+ RD+ TP+ Y + +G A++ +S +K A D S C+F+ GA + L+ KAD +A D TP+ A NVEA++IL +AGANVD
Sbjct: 27 NGFRDVSDRDEAGWTPICYAA-LGGNAMLLSSLVEKKADPRDSITKSDPKLFMTSGATLLTMCVFLRHHGALRLLLERKADANATDGFTSTPMHYACVNHNVEAIQILRDAGANVD 141
BLAST of mRNA_H-paniculata_contig8007.16034.1 vs. uniprot
Match: E4ZLH1_LEPMJ (Similar to proteasome regulatory particle subunit (Nas6) n=1 Tax=Leptosphaeria maculans (strain JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8) TaxID=985895 RepID=E4ZLH1_LEPMJ) HSP 1 Score: 52.0 bits (123), Expect = 1.550e-5 Identity = 38/121 (31.40%), Postives = 59/121 (48.76%), Query Frame = 1
Query: 1 VTLLLGAYAEVNARDDQRRTPLHYCSEIGSTAVMNTSNAKKAA------HKGDQCHYSYCLFVGA---QQELISFKADIDAKDSSLETPLSKAAWAGNVEAVEILLEAGANVDTRDTDGHL 336
V LLL A+VNA+++ +T LH+C+ + + T A+K A K Q VG+ + L+ K+ +DA D T L A G+ +A +LL GA+ +D DGH+
Sbjct: 91 VDLLLSKEADVNAKNNNGQTALHFCASKINLDIARTLLAQKPAASARIKDKRGQLPLHRAASVGSVPMMKALLDAKSPLDATDMDGMTALHHAMSEGHGDAALLLLTKGADFCKKDKDGHV 211
BLAST of mRNA_H-paniculata_contig8007.16034.1 vs. uniprot
Match: A0A8D0A944_SANLU (Ankyrin repeat and BTB domain containing 2 n=1 Tax=Sander lucioperca TaxID=283035 RepID=A0A8D0A944_SANLU) HSP 1 Score: 52.4 bits (124), Expect = 1.730e-5 Identity = 40/104 (38.46%), Postives = 49/104 (47.12%), Query Frame = 1
Query: 4 TLLLGAYAEVNARDDQRRTPLHYCSEIGSTAVMNT---SNAKKAAHKGDQCHYSYCLFVGAQQELISFKADIDAKDSSLETPLSKAAWAGNVEAVEILLEAGAN 306
T LLGA VN DDQ TPL Y S G A++ + A D S C + + A +DA+ SS ETPL AA AG E V +LL GA+
Sbjct: 502 TQLLGAEG-VNTMDDQGMTPLMYASAAGDEALVQMLVEAGANLDLQMCDGVLSSCCQLLLEAGADVEGGAQLDAQQSSAETPLQLAAAAGYYEMVSLLLTHGAD 604
BLAST of mRNA_H-paniculata_contig8007.16034.1 vs. uniprot
Match: F2UBL9_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UBL9_SALR5) HSP 1 Score: 52.0 bits (123), Expect = 2.380e-5 Identity = 27/48 (56.25%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 187 LISFKADIDAKDSSLETPLSKAAWAGNVEAVEILLEAGANVDTRDTDG 330
L S + D+DAKD+SL TPL A + GN E V LL+AGANVD +D G
Sbjct: 463 LSSPEIDVDAKDTSLRTPLHNATFIGNAEIVGQLLDAGANVDAQDAMG 510
BLAST of mRNA_H-paniculata_contig8007.16034.1 vs. uniprot
Match: A0A425BRK2_9PEZI (Uncharacterized protein n=1 Tax=Scytalidium sp. 3C TaxID=2487125 RepID=A0A425BRK2_9PEZI) HSP 1 Score: 50.4 bits (119), Expect = 8.350e-5 Identity = 32/116 (27.59%), Postives = 56/116 (48.28%), Query Frame = 1
Query: 28 EVNARDDQRRTPLHYCSEIGSTAVMNTSNAKKAAHKGDQCH----YSYCLFVGAQQELISF----------KADIDAKDSSLETPLSKAAWAGNVEAVEILLEAGANVDTRDTDGH 333
++NA+D + TPLH + + V + A A+ G + H +G Q +++ + D++ D + TPL +A +G E+V IL+ AGA++D RD+ H
Sbjct: 416 DINAQDSEGYTPLHLAAVVSEPRVFSLIQA--GANPGAKSHNXXXXXXXXXLGRQSGILAMIIHLSKDLNLEIDVNGTDVNGRTPLHEACRSGCPESVRILVNAGADIDARDSSNH 529 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8007.16034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8007.16034.1 >prot_H-paniculata_contig8007.16034.1 ID=prot_H-paniculata_contig8007.16034.1|Name=mRNA_H-paniculata_contig8007.16034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp VTLLLGAYAEVNARDDQRRTPLHYCSEIGSTAVMNTSNAKKAAHKGDQCHback to top mRNA from alignment at H-paniculata_contig8007:10228..10626- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8007.16034.1 ID=mRNA_H-paniculata_contig8007.16034.1|Name=mRNA_H-paniculata_contig8007.16034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=399bp|location=Sequence derived from alignment at H-paniculata_contig8007:10228..10626- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8007:10228..10626- >mRNA_H-paniculata_contig8007.16034.1 ID=mRNA_H-paniculata_contig8007.16034.1|Name=mRNA_H-paniculata_contig8007.16034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at H-paniculata_contig8007:10228..10626- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |