mRNA_H-paniculata_contig7985.16003.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7985.16003.1 vs. uniprot
Match: D7G279_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G279_ECTSI) HSP 1 Score: 282 bits (722), Expect = 3.170e-83 Identity = 142/189 (75.13%), Postives = 158/189 (83.60%), Query Frame = 3
Query: 126 ETEEAGVLRQELRKCSHFFTSVEAQFLVRQERLKEGWRQLLLPNIIVEGNPTKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMRNVANHEPFVEHPKLIEMLSCMEQLFKDIENLPSARAEPGTRVPLREEQLFIDTMLTINTEAFRLQRQEGMDIGLNTSEFSHKRDGLGH 692
E E +LRQELRKCS FFT VE Q VRQ R+ EGWRQLLLPN++VEGNP KRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFM+NV + PFV++PK+I+MLS +E LFK+IE+LPSA AE GTRVPLREEQLFIDTMLTINTEAFRLQ+ EG DIG +G+GH
Sbjct: 61 EVEFYRLLRQELRKCSEFFTGVEGQLGVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIG----------EGVGH 239
BLAST of mRNA_H-paniculata_contig7985.16003.1 vs. uniprot
Match: A0A6H5L5H8_9PHAE (SPX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H8_9PHAE) HSP 1 Score: 276 bits (707), Expect = 1.900e-81 Identity = 133/164 (81.10%), Postives = 148/164 (90.24%), Query Frame = 3
Query: 219 RLKEGWRQLLLPNIIVEGNPTKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMRNVANHEPFVEHPKLIEMLSCMEQLFKDIENLPSARAEPGTRVPLREEQLFIDTMLTINTEAFRLQRQEGMDIGLNTSEFSHKRDGLGHTPAVVI 710
R+ EGWRQLLLPN++VEGNP KRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFM+NV N+ PFV++PK+I+MLS +E LFK+IE+LPSA AE GTRVPLREEQLFIDTMLTINTEAFRLQ+ EG DIGLNT EFSHKRDG P+ +I
Sbjct: 12 RVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVNNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQLFIDTMLTINTEAFRLQQAEGADIGLNTPEFSHKRDGFSGKPSAMI 175
BLAST of mRNA_H-paniculata_contig7985.16003.1 vs. uniprot
Match: A0A835Z5J1_9STRA (SPX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J1_9STRA) HSP 1 Score: 167 bits (424), Expect = 2.940e-43 Identity = 89/150 (59.33%), Postives = 108/150 (72.00%), Query Frame = 3
Query: 147 LRQELRKCSHFFTSVEAQFLVRQERLKEGWRQLL-LPNIIVEGNPTKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMRNVANHEP-FVEHPKLIEMLSCMEQLFKDIENLPSARAEPGTRVPLREEQLFIDTM 590
LRQELRKC FF S E+QFLVR+ R++EGWRQL +P + V+G KRLMAACV+LYKDLLLLENFAIMNY FSKILKKHDKLTGF TRE +M+NV N F +P+++EML +E+LF+ I+ + EEQLFID M
Sbjct: 74 LRQELRKCKEFFASAESQFLVRRARVREGWRQLTAVPEVPVDGEQYKRLMAACVRLYKDLLLLENFAIMNYTAFSKILKKHDKLTGFCTRERYMKNVVNMTTSFTHYPRVLEMLEDVEELFRGIQTHANIAHSS-------EEQLFIDAM 216
BLAST of mRNA_H-paniculata_contig7985.16003.1 vs. uniprot
Match: A0A4D9D3X8_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3X8_9STRA) HSP 1 Score: 154 bits (388), Expect = 3.070e-37 Identity = 80/179 (44.69%), Postives = 112/179 (62.57%), Query Frame = 3
Query: 147 LRQELRKCSHFFTSVEAQFLVRQERLKEGWRQLLLPNIIVEGNPTKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMRNVANHEPFVEHPKLIEMLSCMEQLFKDIENLPSARAEPGTRVPLREEQLFIDTMLTINTEAFRLQRQEGMDIG-LNTSEFSHKRD 680
LR E+ K S F+ +E Q R+ R+K G + L P ++E + ++ AC+ LYKDLLLLENFA+MNYC SK LKKHDK TR FMRNV N +PF +P+L+EML ME++FK+I+ L +A P EE+LF++ + +N EA +QR+E D+G +TS+ H D
Sbjct: 81 LRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKARPLEE----EERLFLEAIRGLNQEASSMQREEKADLGGASTSDPEHSAD 255
BLAST of mRNA_H-paniculata_contig7985.16003.1 vs. uniprot
Match: W7TGL0_9STRA (SPX domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGL0_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.380e-36 Identity = 80/179 (44.69%), Postives = 112/179 (62.57%), Query Frame = 3
Query: 147 LRQELRKCSHFFTSVEAQFLVRQERLKEGWRQLLLPNIIVEGNPTKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMRNVANHEPFVEHPKLIEMLSCMEQLFKDIENLPSARAEPGTRVPLREEQLFIDTMLTINTEAFRLQRQEGMDIG-LNTSEFSHKRD 680
LR E+ K S F+ +E Q R+ R+K G + L P ++E + ++ AC+ LYKDLLLLENFA+MNYC SK LKKHDK TR FMRNV N +PF +P+L+EML ME++FK+I+ L +A P EE+LF++ + +N EA +QR+E D+G +TS+ H D
Sbjct: 81 LRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKARPLEE----EERLFLEAIRGLNQEASSMQREEKADLGGASTSDPEHSAD 255
BLAST of mRNA_H-paniculata_contig7985.16003.1 vs. uniprot
Match: A0A7S2D364_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D364_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.400e-29 Identity = 71/162 (43.83%), Postives = 105/162 (64.81%), Query Frame = 3
Query: 147 LRQELRKCSHFFTSVEAQFLVRQERLKEGWRQLLLPNIIVEGNPTKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMRN-VANHEPFVEHPKLIEMLSCMEQLFKDIENLPSARAEPGTRVPLR-EEQLFIDTMLTINTEAFRLQR 626
L ELRK S FF + E Q ++R R+KEG RQL + N + +MAAC+KLYKDLL+LEN+AI+N+CGFSKILKKHDK TGF TR+ FM N V+ HE ++ L ++ E LF +I + + T++ L+ +E++ I+++L + +A R ++
Sbjct: 80 LHAELRKSSEFFRAAEQQMVIRIARIKEGARQLRETFTVTHENLDQMIMAACLKLYKDLLMLENYAIINFCGFSKILKKHDKNTGFVTRDRFMNNTVSRHEHLCKYEVLKRIIKETEDLFVEISKI----SHTNTKLSLQTDERISIESILNLKFQAIRFKK 237
BLAST of mRNA_H-paniculata_contig7985.16003.1 vs. uniprot
Match: A0A7S0GC00_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GC00_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.200e-28 Identity = 67/165 (40.61%), Postives = 103/165 (62.42%), Query Frame = 3
Query: 144 VLRQELRKCSHFFTSVEAQFLVRQERLKEGWRQLLLPNIIVEGNPTKRLMAACV-KLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMRNVANHEPFVEHPKLIEMLSCMEQLFKDIENLPSARAEPGTRVPLREEQLFIDTMLTINTEAFRLQRQEG 635
+L EL+K FF+ E +F +R+ER++E + PN I+ N ++A V +LYKDLLLLE FAIM+YC +SKILKKHDK+TG+ TR +FM NV N F +P L++M+S E L+ ++ +L + + G +E+LF++ + +N +A +EG
Sbjct: 72 LLHGELKKAIRFFSKAEEEFAIREERVRESMIIMKKPNSIMLINDRWSVLAKSVYRLYKDLLLLETFAIMSYCAYSKILKKHDKVTGYETRVAFMSNVVNKANFTNYPNLVQMISRTETLYDEVSHLLESEGKQGL---YEDERLFLNMIHRLNEQALDTAGEEG 233
BLAST of mRNA_H-paniculata_contig7985.16003.1 vs. uniprot
Match: B7G3D1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3D1_PHATC) HSP 1 Score: 129 bits (323), Expect = 1.990e-28 Identity = 65/164 (39.63%), Postives = 98/164 (59.76%), Query Frame = 3
Query: 144 VLRQELRKCSHFFTSVEAQFLVRQERLKEGWRQLLLPNIIVEGNPTKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMRNVANHEPFVEHPKLIEMLSCMEQLFKDIENLPSARAEPGTRVPLREEQLFIDTMLTINTEAFRLQRQEG 635
+L E +K + FF + +F++R+ER++EG + + PN I+ L + +LYKDLLL E FAIM YC FSKILKKHDK+TG +TR++FM NV N F +P+++EM+S E L+ + N + G +E+LFI+ + +N +A EG
Sbjct: 130 LLHTEFKKATFFFDKAQQEFIIREERVQEGSKIMEQPNSIMVNEKWSLLAKSIYRLYKDLLLFETFAIMTYCSFSKILKKHDKVTGHQTRKAFMANVVNKANFTNYPRVLEMISRCEHLYDGVSNRLLQEGKEGL---YEDERLFINMIARLNEQALDTAEGEG 290
BLAST of mRNA_H-paniculata_contig7985.16003.1 vs. uniprot
Match: A0A7R9YCT0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCT0_9STRA) HSP 1 Score: 127 bits (320), Expect = 4.290e-28 Identity = 85/235 (36.17%), Postives = 116/235 (49.36%), Query Frame = 3
Query: 147 LRQELRKCSHFFTSVEAQFLVRQERLKEGWRQLLLP---------------------------NIIVEGNPTKR-LMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMRNVANHEPFVEHPKLIEMLSCMEQLFKDIEN--------LPSARA-------------------EPGTRVPLREE-QLFIDTMLTINTEAFRLQR-------QEGMDIGLNTSE 662
L ELRK F+ E +F +R R++EG RQLL P + NP +R ++ACV++YKDLLLLE +AIM+YC FSKILKKHDK+TG+ TR +M V N +PF ++ +++ML E LFK + LPS R E +++PL EE QLFID + +N EA L R +E +GL+ SE
Sbjct: 68 LMAELRKTEEFYKGAETEFRIRISRVREGVRQLLEPAYRPVEPETSTDDSDSADASHAPVAGGEAVAPENPKRRRALSACVRIYKDLLLLETYAIMSYCAFSKILKKHDKVTGYTTRTQYMSRVVNPKPFTKYKGVVKMLRDCESLFKILTTQTEGPDAELPSPRRRTNKQAGARDALSLSDWSDEMRSKLPLHEEEQLFIDVIRNLNNEATSLMRDEQKEVEEESTQVGLSESE 302
BLAST of mRNA_H-paniculata_contig7985.16003.1 vs. uniprot
Match: A0A7S1UVK7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UVK7_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.270e-27 Identity = 62/165 (37.58%), Postives = 99/165 (60.00%), Query Frame = 3
Query: 144 VLRQELRKCSHFFTSVEAQFLVRQERLKEGWRQLLLPNIIVEGNPTKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMRNVANHEPFVEHPKLIEMLSCMEQLFKDIENLPSARAEPGTRVPLREEQLFIDTMLTINTEAFRLQRQEGM 638
+L E +K +HFF +F++R+ER++EG + PN I+ L + +LYKDLLLLE FAIM YC FSKILKKHDK+TG+ TR++FM V ++ F +P L+EM++ E++++++ + G +E+LFI+ + +N + EG+
Sbjct: 99 LLHSEYKKATHFFGKALQEFVIREERVREGIEIMKKPNSIMVNEKWSLLAKSLYRLYKDLLLLETFAIMTYCSFSKILKKHDKVTGYNTRQAFMSKVVSNANFSNYPVLLEMIARCERMYEEVSQYLMKEGKEGLH---EDERLFINMIHRLNGQVMDTAESEGV 260 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7985.16003.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7985.16003.1 >prot_H-paniculata_contig7985.16003.1 ID=prot_H-paniculata_contig7985.16003.1|Name=mRNA_H-paniculata_contig7985.16003.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=223bp MAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMRNVANback to top mRNA from alignment at H-paniculata_contig7985:4..10892+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7985.16003.1 ID=mRNA_H-paniculata_contig7985.16003.1|Name=mRNA_H-paniculata_contig7985.16003.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10889bp|location=Sequence derived from alignment at H-paniculata_contig7985:4..10892+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7985:4..10892+ >mRNA_H-paniculata_contig7985.16003.1 ID=mRNA_H-paniculata_contig7985.16003.1|Name=mRNA_H-paniculata_contig7985.16003.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1338bp|location=Sequence derived from alignment at H-paniculata_contig7985:4..10892+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |