|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1133 |
| Cds size | 1131 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7981.15999.1 >prot_H-paniculata_contig7981.15999.1 ID=prot_H-paniculata_contig7981.15999.1|Name=mRNA_H-paniculata_contig7981.15999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=377bp
TLSPVVVATPQPAAVPEVTQTFAPNPPGVTRAPDATLAPIPSATSPSTLF
PLAPGTQSPGHISLPTPQPSASGGEISPSTSDFTTPTPTSDLSTPAPFTP
APSPPIVADVEQRETADTASDAVTTAVASTAAAVTVTSFTSTTTTVTAVV
SAAPGAASGAAAGGGAAAGGGAVAGGGIASAGAAAGGTSGAAAGATGGAS
AAGAGTATVATGTTAATPAAAAGTTGVTGATGATGATGATGATGATGATG
ATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGTTGVT
TTTTTTGATTTGGANATTTVGSTSTGQASGANATTTGNTATINTGTEPVT
GQTVDPGGTSSRSPSATLGLVDDEPN* back to topmRNA from alignment at H-paniculata_contig7981:329..1910+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig7981.15999.1 ID=mRNA_H-paniculata_contig7981.15999.1|Name=mRNA_H-paniculata_contig7981.15999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1582bp|location=Sequence derived from alignment at H-paniculata_contig7981:329..1910+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCCTTTCACCAGTTGTTGTCGCCACGCCGCAGCCTGCTGCGGTACCAGA
AGTAACCCAAACCTTTGCCCCTAATCCCCCAGGAGTAACCCGCGCACCCG
ATGCCACCCTTGCTCCAATCCCTTCAGCCACATCCCCGTCCACACTTTTT
CCCCTTGCTCCAGGGACCCAGTCACCGGGCCACATCTCCTTACCTACTCC
GCAACCAAGTGCTTCCGGCGGTGAGATATCCCCATCCACGTCGGACTTCA
CAACCCCAACACCGACGTCGGACCTCAGCACCCCAGCACCGTTCACCCCC
GCTCCCTCCCCTCCGATAGTTGCCGACGTAGAGCAGAGGGAAACGGCTGA
CACTGCCTCCGATGCCGTCACTACAGCGGTCGCTAGTACCGCCGCTGCCG
TGACAGGTGTGTTGTATGTTGTATTGGAGAAATAGCGTAGCGGAAGCAAA
TTATACTTGTGAATAATCTCACAATTTTGTTGTATATAAGAATGCGTATT
TCCCCTACCTGTTGGTTGTACGCGTGGTGGGTGGCTCACCACTCTTTCAA
ACACTGTAAGCTCAACCACGCTTGGAGTTTCTGGTACATGAACAATCGCT
TTTTTTATTTGAATGAGATGAAAAGAACACCACATTTGTTGATGCAGCGC
ACCAGTGGATCATGAACCCCCCGTTCGCGCCGAAGGTTCGAAGCCCTCCT
CCGTTTATATCGCCTATTGTATTTTGTGCGCTAAAATGGTAATGATTATT
TTGGAACGTACTTTCAATTCTGTACCCGGCTAAATTCTTCACTTGCATCT
CTTCACAATTGAATCGCGCCTAATCTTGGAAATGTTGTAACCATCCCGCT
GTGACAGTCACGTCGTTCACCTCAACAACGACGACGGTTACGGCCGTGGT
GTCTGCAGCCCCTGGGGCGGCTAGTGGCGCCGCCGCGGGAGGTGGAGCCG
CCGCGGGAGGTGGAGCCGTCGCGGGAGGCGGAATCGCGTCCGCCGGAGCA
GCTGCGGGCGGGACATCCGGAGCGGCCGCGGGCGCGACTGGCGGAGCCAG
TGCGGCGGGAGCCGGGACGGCGACCGTGGCAACTGGTACCACTGCCGCTA
CCCCTGCTGCGGCGGCTGGGACGACCGGGGTAACGGGTGCCACGGGTGCC
ACGGGTGCCACAGGTGCCACGGGTGCCACAGGTGCCACGGGTGCCACGGG
TGCCACGGGTGCCACAGGTGCCACGGGTGCCACGGGTGCCACGGGTGCCA
CGGGTGCCACAGGTGCCACGGGTGCCACAGGTGCCACAGGTGCCACGGGT
GCCACAGGTGCCACGGGTGCCACGGGTGCCACGGGCACCACGGGAGTGAC
GACTACGACGACAACAACGGGCGCCACTACCACGGGGGGCGCCAACGCGA
CTACTACGGTCGGCAGCACGAGTACTGGTCAAGCCTCCGGAGCTAACGCC
ACCACGACGGGAAACACGGCCACCATAAACACTGGCACAGAACCAGTCAC
AGGGCAGACTGTTGACCCCGGAGGGACCTCTTCGCGGAGCCCTTCCGCCA
CGCTTGGACTGGTAGATGATGAGCCTAACTAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig7981:329..1910+ >mRNA_H-paniculata_contig7981.15999.1 ID=mRNA_H-paniculata_contig7981.15999.1|Name=mRNA_H-paniculata_contig7981.15999.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2262bp|location=Sequence derived from alignment at H-paniculata_contig7981:329..1910+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCCTTTCACCAGTTGTTGTCGCCACGCCGCAGCCTGCTGCGGTACCAGA
AGTAACCCAAACCTTTGCCCCTAATCCCCCAGGAGTAACCCGCGCACCCG
ATGCCACCCTTGCTCCAATCCCTTCAGCCACATCCCCGTCCACACTTTTT
CCCCTTGCTCCAGGGACCCAGTCACCGGGCCACATCTCCTTACCTACTCC
GCAACCAAGTGCTTCCGGCGGTGAGATATCCCCATCCACGTCGGACTTCA
CAACCCCAACACCGACGTCGGACCTCAGCACCCCAGCACCGTTCACCCCC
GCTCCCTCCCCTCCGATAGTTGCCGACGTAGAGCAGAGGGAAACGGCTGA
CACTGCCTCCGATGCCGTCACTACAGCGGTCGCTAGTACCGCCGCTGCCG
TGACAGACCCTTTCACCAGTTGTTGTCGCCACGCCGCAGCCTGCTGCGGT
ACCAGAAGTAACCCAAACCTTTGCCCCTAATCCCCCAGGAGTAACCCGCG
CACCCGATGCCACCCTTGCTCCAATCCCTTCAGCCACATCCCCGTCCACA
CTTTTTCCCCTTGCTCCAGGGACCCAGTCACCGGGCCACATCTCCTTACC
TACTCCGCAACCAAGTGCTTCCGGCGGTGAGATATCCCCATCCACGTCGG
ACTTCACAACCCCAACACCGACGTCGGACCTCAGCACCCCAGCACCGTTC
ACCCCCGCTCCCTCCCCTCCGATAGTTGCCGACGTAGAGCAGAGGGAAAC
GGCTGACACTGCCTCCGATGCCGTCACTACAGCGGTCGCTAGTACCGCCG
CTGCCGTGACAGTCACGTCGTTCACCTCAACAACGACGACGGTTACGGCC
GTGGTGTCTGCAGCCCCTGGGGCGGCTAGTGGCGCCGCCGCGGGAGGTGG
AGCCGCCGCGGGAGGTGGAGCCGTCGCGGGAGGCGGAATCGCGTCCGCCG
GAGCAGCTGCGGGCGGGACATCCGGAGCGGCCGCGGGCGCGACTGGCGGA
GCCAGTGCGGCGGGAGCCGGGACGGCGACCGTGGCAACTGGTACCACTGC
CGCTACCCCTGCTGCGGCGGCTGGGACGACCGGGGTAACGGGTGCCACGG
GTGCCACGGGTGCCACAGGTGCCACGGGTGCCACAGGTGCCACGGGTGCC
ACGGGTGCCACGGGTGCCACAGGTGCCACGGGTGCCACGGGTGCCACGGG
TGCCACGGGTGCCACAGGTGCCACGGGTGCCACAGGTGCCACAGGTGCCA
CGGGTGCCACAGGTGCCACGGGTGCCACGGGTGCCACGGGCACCACGGGA
GTGACGACTACGACGACAACAACGGGCGCCACTACCACGGGGGGCGCCAA
CGCGACTACTACGGTCGGCAGCACGAGTACTGGTCAAGCCTCCGGAGCTA
ACGCCACCACGACGGGAAACACGGCCACCATAAACACTGGCACAGAACCA
GTCACAGGGCAGACTGTTGACCCCGGAGGGACCTCTTCGCGGAGCCCTTC
CGCCACGCTTGGACTGGTAGATGATGAGCCTAACTAGTCACGTCGTTCAC
CTCAACAACGACGACGGTTACGGCCGTGGTGTCTGCAGCCCCTGGGGCGG
CTAGTGGCGCCGCCGCGGGAGGTGGAGCCGCCGCGGGAGGTGGAGCCGTC
GCGGGAGGCGGAATCGCGTCCGCCGGAGCAGCTGCGGGCGGGACATCCGG
AGCGGCCGCGGGCGCGACTGGCGGAGCCAGTGCGGCGGGAGCCGGGACGG
CGACCGTGGCAACTGGTACCACTGCCGCTACCCCTGCTGCGGCGGCTGGG
ACGACCGGGGTAACGGGTGCCACGGGTGCCACGGGTGCCACAGGTGCCAC
GGGTGCCACAGGTGCCACGGGTGCCACGGGTGCCACGGGTGCCACAGGTG
CCACGGGTGCCACGGGTGCCACGGGTGCCACGGGTGCCACAGGTGCCACG
GGTGCCACAGGTGCCACAGGTGCCACGGGTGCCACAGGTGCCACGGGTGC
CACGGGTGCCACGGGCACCACGGGAGTGACGACTACGACGACAACAACGG
GCGCCACTACCACGGGGGGCGCCAACGCGACTACTACGGTCGGCAGCACG
AGTACTGGTCAAGCCTCCGGAGCTAACGCCACCACGACGGGAAACACGGC
CACCATAAACACTGGCACAGAACCAGTCACAGGGCAGACTGTTGACCCCG
GAGGGACCTCTTCGCGGAGCCCTTCCGCCACGCTTGGACTGGTAGATGAT
GAGCCTAACTAG back to top
|