mRNA_H-paniculata_contig79428.15973.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig79428.15973.1 vs. uniprot
Match: A0A251TN47_HELAN (Putative zinc finger, CCHC-type n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TN47_HELAN) HSP 1 Score: 110 bits (275), Expect = 7.010e-26 Identity = 51/111 (45.95%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 1 NGIKQEFSAAYTPQQNDVEERSWRSIFEMARANMITANMSNRYWSEALRSVVYCLNRAPTRPRNRGTPSEKWYGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFL 333
NGI + + +YTPQQN V ER R++ E++R+ + + N YW+EA+ Y LNRA T+ + TP E W G+ P +DHLRVFGC AYV Q R KLDDK +F+
Sbjct: 585 NGIHHQLTTSYTPQQNGVAERKNRTLMELSRSMLKMKELPNTYWAEAVACATYLLNRATTKSVPKLTPQEAWSGKKPNVDHLRVFGCIAYVHIPKQHRSKLDDKTERAIFV 695
BLAST of mRNA_H-paniculata_contig79428.15973.1 vs. uniprot
Match: A0A1W7R6D6_AEDAL (Putative polyprotein (Fragment) n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6D6_AEDAL) HSP 1 Score: 109 bits (273), Expect = 1.250e-25 Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 4 GIKQEFSAAYTPQQNDVEERSWRSIFEMARANMITANMSNRYWSEALRSVVYCLNRAPTRPRNRGTPSEKWYGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKA 315
GIK E++AAY+PQQN V ER RS+ EM R ++ A M NR+W+EA+ + Y NR P+ +R TP E WY P L+HL+ FGCT YV+ S +R+KLD KA
Sbjct: 554 GIKAEYTAAYSPQQNGVSERKNRSLSEMGRCLLLDAKMDNRFWAEAINTACYLQNRLPSAAVDR-TPYEIWYNRKPDLNHLKRFGCTGYVLIPSVKRKKLDVKA 656
BLAST of mRNA_H-paniculata_contig79428.15973.1 vs. uniprot
Match: A0A2Z6LTJ1_TRISU (Integrase catalytic domain-containing protein n=2 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6LTJ1_TRISU) HSP 1 Score: 108 bits (269), Expect = 4.400e-25 Identity = 50/110 (45.45%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 4 GIKQEFSAAYTPQQNDVEERSWRSIFEMARANMITANMSNRYWSEALRSVVYCLNRAPTRPRNRGTPSEKWYGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFL 333
GI+Q+ + AY+PQQN + ER R++ EMAR+ M + N +W+EA+ + VY LNR PT+ TP E W G+ P HLRVFG Y+ Q+R KL+DK G+FL
Sbjct: 556 GIEQQLTVAYSPQQNGMSERKNRTVMEMARSMMKDKGLPNTFWAEAVYTAVYILNRCPTKAVQDKTPIETWCGKKPSAKHLRVFGSICYIHVPKQKRHKLEDKTTKGIFL 665
BLAST of mRNA_H-paniculata_contig79428.15973.1 vs. uniprot
Match: UPI000A2AF52F (uncharacterized protein LOC107607928 n=1 Tax=Arachis ipaensis TaxID=130454 RepID=UPI000A2AF52F) HSP 1 Score: 107 bits (268), Expect = 6.140e-25 Identity = 49/110 (44.55%), Postives = 72/110 (65.45%), Query Frame = 1
Query: 4 GIKQEFSAAYTPQQNDVEERSWRSIFEMARANMITANMSNRYWSEALRSVVYCLNRAPTRPRNRGTPSEKWYGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFL 333
GI+++F+ AYTPQQN V ER R++ E ARA + TA ++ +W+EA+++ Y +NR+P+ TP E W G+ P L +FGC YVM+ SQ+R KLD K+ +FL
Sbjct: 268 GIQRQFTVAYTPQQNGVAERMNRTLLERARAMLQTAGLAKFFWAEAVKTACYVINRSPSTAIGLKTPMEMWQGKPPNYSSLHIFGCPVYVMYNSQERTKLDPKSRKCIFL 377
BLAST of mRNA_H-paniculata_contig79428.15973.1 vs. uniprot
Match: A0A2M4CK12_ANODA (Putative pol polyprotein (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK12_ANODA) HSP 1 Score: 107 bits (267), Expect = 8.190e-25 Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 4 GIKQEFSAAYTPQQNDVEERSWRSIFEMARANMITANMSNRYWSEALRSVVYCLNRAPTRPRNRGTPSEKWYGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFL 333
GIK +++A+Y+PQQN V ER RS+ EM R + A + +YW+EA+ + VY N +PT+PRN TP E W+G PK++HLR+FGC A+ +R+KL A FL
Sbjct: 123 GIKPQYTASYSPQQNGVAERKNRSLIEMVRCMLFDAQLEQKYWAEAMNTAVYLQNISPTKPRNN-TPYETWHGVKPKVNHLRIFGCDAWAHIPKAKRKKLGATAQKLTFL 231
BLAST of mRNA_H-paniculata_contig79428.15973.1 vs. uniprot
Match: A0A4Y1RLQ4_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RLQ4_PRUDU) HSP 1 Score: 106 bits (264), Expect = 2.040e-24 Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = 1
Query: 1 NGIKQEFSAAYTPQQNDVEERSWRSIFEMARANMITANMSNRYWSEALRSVVYCLNRAPTRPRNRGTPSEKWYGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKA 315
NGIK +F+A YTPQQN V ER R+I E+AR+ + M NR+W+EA+ VY LNRA + TP E W G P + HLR+FG AY + RRKLDDK+
Sbjct: 76 NGIKHQFTARYTPQQNGVAERKNRTIMELARSMLKAKAMPNRFWAEAVACAVYLLNRASSNSVEGKTPQEAWSGLKPCISHLRIFGSIAYSHIPDETRRKLDDKS 180
BLAST of mRNA_H-paniculata_contig79428.15973.1 vs. uniprot
Match: A0A5H2YBV8_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2YBV8_PRUDU) HSP 1 Score: 106 bits (264), Expect = 2.090e-24 Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = 1
Query: 1 NGIKQEFSAAYTPQQNDVEERSWRSIFEMARANMITANMSNRYWSEALRSVVYCLNRAPTRPRNRGTPSEKWYGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKA 315
NGIK +F+A YTPQQN V ER R+I E+AR+ + M NR+W+EA+ VY LNRA + TP E W G P + HLR+FG AY + RRKLDDK+
Sbjct: 642 NGIKHQFTARYTPQQNGVAERKNRTIMELARSMLKAKAMPNRFWAEAVACAVYLLNRASSNSVEGKTPQEAWSGLKPCISHLRIFGSIAYSHIPDETRRKLDDKS 746
BLAST of mRNA_H-paniculata_contig79428.15973.1 vs. uniprot
Match: A0A4Y1RY62_PRUDU (NAD(P)-binding Rossmann-fold superfamily protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RY62_PRUDU) HSP 1 Score: 106 bits (264), Expect = 2.100e-24 Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = 1
Query: 1 NGIKQEFSAAYTPQQNDVEERSWRSIFEMARANMITANMSNRYWSEALRSVVYCLNRAPTRPRNRGTPSEKWYGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKA 315
NGIK +F+A YTPQQN V ER R+I E+AR+ + M NR+W+EA+ VY LNRA + TP E W G P + HLR+FG AY + RRKLDDK+
Sbjct: 238 NGIKHQFTARYTPQQNGVAERKNRTIMELARSMLKAKAMPNRFWAEAVACAVYLLNRASSNSVEGKTPQEAWSGLKPCISHLRIFGSIAYSHIPDETRRKLDDKS 342
BLAST of mRNA_H-paniculata_contig79428.15973.1 vs. uniprot
Match: A0A1W7R6G9_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6G9_AEDAL) HSP 1 Score: 106 bits (264), Expect = 2.110e-24 Identity = 52/110 (47.27%), Postives = 70/110 (63.64%), Query Frame = 1
Query: 4 GIKQEFSAAYTPQQNDVEERSWRSIFEMARANMITANMSNRYWSEALRSVVYCLNRAPTRPRNRGTPSEKWYGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFL 333
GI Q+F+ AYTPQQN V ER RS+ EMAR ++ A + N+YW+EA+ + Y NR PT+P TP E W GE P L HL++FG AYV S++R K K+ +F+
Sbjct: 271 GITQQFTTAYTPQQNGVSERKNRSLVEMARCMILDAQLPNKYWAEAVNTATYVQNRLPTKP-IPSTPYEIWTGEKPDLSHLKIFGSWAYVWIPSEKRSKFQAKSKKMLFV 379
BLAST of mRNA_H-paniculata_contig79428.15973.1 vs. uniprot
Match: A0A4Y1RM74_PRUDU (Transposable element protein n=7 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RM74_PRUDU) HSP 1 Score: 106 bits (264), Expect = 2.140e-24 Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = 1
Query: 1 NGIKQEFSAAYTPQQNDVEERSWRSIFEMARANMITANMSNRYWSEALRSVVYCLNRAPTRPRNRGTPSEKWYGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKA 315
NGIK +F+A YTPQQN V ER R+I E+AR+ + M NR+W+EA+ VY LNRA + TP E W G P + HLR+FG AY + RRKLDDK+
Sbjct: 642 NGIKHQFTARYTPQQNGVAERKNRTIMELARSMLKAKAMPNRFWAEAVACAVYLLNRASSNSVEGKTPQEAWSGLKPCISHLRIFGSIAYSHIPDETRRKLDDKS 746 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig79428.15973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig79428.15973.1 >prot_H-paniculata_contig79428.15973.1 ID=prot_H-paniculata_contig79428.15973.1|Name=mRNA_H-paniculata_contig79428.15973.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp NGIKQEFSAAYTPQQNDVEERSWRSIFEMARANMITANMSNRYWSEALRSback to top mRNA from alignment at H-paniculata_contig79428:217..549+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig79428.15973.1 ID=mRNA_H-paniculata_contig79428.15973.1|Name=mRNA_H-paniculata_contig79428.15973.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=333bp|location=Sequence derived from alignment at H-paniculata_contig79428:217..549+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig79428:217..549+ >mRNA_H-paniculata_contig79428.15973.1 ID=mRNA_H-paniculata_contig79428.15973.1|Name=mRNA_H-paniculata_contig79428.15973.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at H-paniculata_contig79428:217..549+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |