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Homology
BLAST of mRNA_H-paniculata_contig788.15900.1 vs. uniprot
Match: A0A6H5KS53_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS53_9PHAE) HSP 1 Score: 158 bits (399), Expect = 3.970e-41 Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 3
Query: 174 GAAETVYSGETYRMRIRFPANYPIEAPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTAK 410
GAA+TVY+GETYR+RIRFPANYPIEAPEVVFVP APLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTAK
Sbjct: 20 GAADTVYAGETYRIRIRFPANYPIEAPEVVFVPTAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTAK 98
BLAST of mRNA_H-paniculata_contig788.15900.1 vs. uniprot
Match: A0A833VS76_9POAL (Putative ubiquitin-conjugating enzyme E2 18 -like protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VS76_9POAL) HSP 1 Score: 149 bits (375), Expect = 1.940e-37 Identity = 65/121 (53.72%), Postives = 92/121 (76.03%), Query Frame = 3
Query: 48 KMTASVAERRVKKELQKLRKDPLDGMSVEVGSSPTEWFVTIVGAAETVYSGETYRMRIRFPANYPIEAPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTAK 410
K+ + +A R++KE+ + + +P G +V S W + + GA T+Y+GETY++++ FP +YP+EAP+V+F+PPAPLHPHIY+NGHICL ILYD WSPA+T+ SVC+SILSMLSS AK
Sbjct: 10 KVLSKIASNRLQKEVMEWQTNPPAGFKYKVNDSLQRWIIEVTGAPGTLYTGETYQLQVDFPEHYPMEAPQVIFIPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPAK 130
BLAST of mRNA_H-paniculata_contig788.15900.1 vs. uniprot
Match: A0A151ZDL3_9MYCE (Rab GTPase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZDL3_9MYCE) HSP 1 Score: 147 bits (371), Expect = 4.730e-37 Identity = 69/125 (55.20%), Postives = 94/125 (75.20%), Query Frame = 3
Query: 72 RRVKKELQKLRKDPLDGMSVEVGSSPTEWFVTIVGAAETVYSGETYRMRIRFPANYPIEAPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTAKVM-FSTHYFGSR 443
+R++KELQ+++K P G+ +E ++ W V I G T+Y+GE +R++ RF + YP+E+PEV+F+ AP+HPHIY+NGHICLSILYD WSPALT+ SVC+SILSMLSSCT KV Y+ SR
Sbjct: 8 KRLQKELQEIQKSPPHGIMIEEANNLDRWVVQITGTENTLYNGEKFRLQFRFNSEYPLESPEVMFIGVAPIHPHIYSNGHICLSILYDAWSPALTVSSVCVSILSMLSSCTEKVPPVDNQYYVSR 132
BLAST of mRNA_H-paniculata_contig788.15900.1 vs. uniprot
Match: A0A139AU54_GONPJ (Ubiquitin-conjugating enzyme n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AU54_GONPJ) HSP 1 Score: 147 bits (370), Expect = 6.050e-37 Identity = 68/118 (57.63%), Postives = 92/118 (77.97%), Query Frame = 3
Query: 57 ASVAERRVKKELQKLRKDPLDGMSVEVGSSPTEWFVTIVGAAETVYSGETYRMRIRFPANYPIEAPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTAK 410
++++ +R+ KEL +L+K P G+++E + ++W V + GA +T+Y E + +R FP+NYP+E+PEVVFV P+HPHIY+NGHICLSILYD WSPALTI SVCLSILSMLSSCT K
Sbjct: 2 SNLSTKRLTKELAELQKKPPGGVTLESADNLSQWVVKVEGAKDTLYQNEVFWLRFTFPSNYPLESPEVVFVRNIPIHPHIYSNGHICLSILYDHWSPALTISSVCLSILSMLSSCTNK 119
BLAST of mRNA_H-paniculata_contig788.15900.1 vs. uniprot
Match: A0A161ZR94_DAUCS (UBC core domain-containing protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A161ZR94_DAUCS) HSP 1 Score: 147 bits (371), Expect = 6.680e-37 Identity = 67/121 (55.37%), Postives = 91/121 (75.21%), Query Frame = 3
Query: 48 KMTASVAERRVKKELQKLRKDPLDGMSVEVGSSPTEWFVTIVGAAETVYSGETYRMRIRFPANYPIEAPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTAK 410
K + +A R++KEL + + +P G +V + W + ++GA T+YS ETY++++ FP +YP+EAP+VVF+PPAPLHPHIY+NGHICL ILYD WSPA+T+ SVCLSILSMLSS T K
Sbjct: 10 KALSKIAANRLQKELLEWQVNPPSGFKPKVTDNLQRWVIEVIGAPGTLYSNETYQLQVDFPEHYPMEAPQVVFIPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCLSILSMLSSSTEK 130
BLAST of mRNA_H-paniculata_contig788.15900.1 vs. uniprot
Match: A0A0K9RUC4_SPIOL (UBC core domain-containing protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RUC4_SPIOL) HSP 1 Score: 145 bits (367), Expect = 2.310e-36 Identity = 63/121 (52.07%), Postives = 94/121 (77.69%), Query Frame = 3
Query: 48 KMTASVAERRVKKELQKLRKDPLDGMSVEVGSSPTEWFVTIVGAAETVYSGETYRMRIRFPANYPIEAPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTAK 410
K+ + +A+ R++KEL + + +P G+ ++ + W + + GA T+Y+ ETY++++ FP +YP+EAP+V+FVPPAPLHPHIY+NGHICL ILYD WSPA+T+ S+C+SILSMLSS T+K
Sbjct: 10 KVLSKIAQNRLQKELAEWQLNPPPGLKHKITDNLQRWVIDVSGAPGTLYANETYQLQVDFPEHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVNSICISILSMLSSSTSK 130
BLAST of mRNA_H-paniculata_contig788.15900.1 vs. uniprot
Match: A0A4P9X9U3_9FUNG (UBC core domain-containing protein n=2 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9X9U3_9FUNG) HSP 1 Score: 145 bits (365), Expect = 2.940e-36 Identity = 67/119 (56.30%), Postives = 94/119 (78.99%), Query Frame = 3
Query: 57 ASVAERRVKKELQKLRKDPLDGMSVE-VGSSPTEWFVTIVGAAETVYSGETYRMRIRFPANYPIEAPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTAK 410
+++ +R+++EL++L+ P G++VE V S +W + I G ET+Y+GE + ++ RFP YP+E+PEV+F+ P P+HPH+Y+NGHICLSILYD+WSPALTIQSVCLSI SMLSSCT K
Sbjct: 2 SAIFAKRLQRELRELQASPPVGIAVETVNDSLKQWSIRIDGPEETLYAGEQFHLQFRFPEAYPLESPEVIFLDPVPVHPHVYSNGHICLSILYDQWSPALTIQSVCLSIQSMLSSCTKK 120
BLAST of mRNA_H-paniculata_contig788.15900.1 vs. uniprot
Match: A0A2C9VWK6_MANES (UBC core domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9VWK6_MANES) HSP 1 Score: 144 bits (363), Expect = 3.630e-36 Identity = 66/122 (54.10%), Postives = 92/122 (75.41%), Query Frame = 3
Query: 48 KMTASVAERRVKKELQKLRKDPLDGMSVEVGSSPTEWFVTIVGAAETVYSGETYRMRIRFPANYPIEAPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTAKV 413
K + +A R++KEL + + +P G +V + W + + GA T+Y+ ETY++++ FP +YP+EAP+V+F+PPAPLHPHIY+NGHICL ILYD WSPA+T+ SVC+SILSMLSS TAKV
Sbjct: 10 KALSKIACNRLQKELAEWQLNPPTGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSATAKV 131
BLAST of mRNA_H-paniculata_contig788.15900.1 vs. uniprot
Match: F1A0F8_DICPU (UBC core domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A0F8_DICPU) HSP 1 Score: 144 bits (364), Expect = 4.010e-36 Identity = 66/118 (55.93%), Postives = 89/118 (75.42%), Query Frame = 3
Query: 57 ASVAERRVKKELQKLRKDPLDGMSVEVGSSPTEWFVTIVGAAETVYSGETYRMRIRFPANYPIEAPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTAK 410
AS +R++KEL L+ +P G+SV G + +W + I GA +++Y GE + ++ +F YP+E+PEV+F+ P P+HPHIY+NGHICLSILYD WSPALT+ SVCLSILSMLSSCT K
Sbjct: 2 ASRYAKRLQKELLDLKSNPPFGVSVMEGENLDKWVIAIFGAQDSIYEGEIFNLQFKFSPGYPLESPEVIFIGPPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSMLSSCTEK 119
BLAST of mRNA_H-paniculata_contig788.15900.1 vs. uniprot
Match: A0A7I8JYI8_SPIIN (Hypothetical protein n=3 Tax=Liliopsida TaxID=4447 RepID=A0A7I8JYI8_SPIIN) HSP 1 Score: 144 bits (364), Expect = 5.840e-36 Identity = 65/121 (53.72%), Postives = 92/121 (76.03%), Query Frame = 3
Query: 48 KMTASVAERRVKKELQKLRKDPLDGMSVEVGSSPTEWFVTIVGAAETVYSGETYRMRIRFPANYPIEAPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPALTIQSVCLSILSMLSSCTAK 410
K + +A R++KEL + + +PL G + + W + +VGA T+Y+GETY++++ FP +YP+EAP+V+F+ PAPLHPHIY+NGHICL ILYD WSPA+T+ SVC+SILSMLSS T+K
Sbjct: 10 KTLSKIACNRLQKELVEWQVNPLSGFKHKASDNLQRWVIEVVGAPGTLYAGETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTSK 130
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 145.2 |
| Seed ortholog evalue | 2.7e-32 |
| Seed eggNOG ortholog | 5786.XP_003293154.1 |
| KEGG rclass | RC00064,RC00141 |
| KEGG ko | ko:K01446,ko:K10688 |
| KEGG Reaction | R04112 |
| KEGG Pathway | ko04120,map04120 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000209,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019899,GO:0019941,GO:0030163,GO:0031625,GO:0032446,GO:0036211,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044424,GO:0044464,GO:0051603,GO:0061630,GO:0061659,GO:0070647,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 |
| EggNOG free text desc. | Belongs to the ubiquitin-conjugating enzyme family |
| EggNOG OGs | 3XGWE@554915,COG5078@1,KOG0427@2759 |
| Ec32 ortholog description | Ubiquitin-conjugating enzyme/RWD-like |
| Ec32 ortholog | Ec-23_003010.1 |
| EC | 2.3.2.25 |
| COG Functional cat. | H |
| Best tax level | Amoebozoa |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko04121 |
| Exons | 4 |
| Model size | 5709 |
| Cds size | 492 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig788.15900.1 >prot_H-paniculata_contig788.15900.1 ID=prot_H-paniculata_contig788.15900.1|Name=mRNA_H-paniculata_contig788.15900.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
MTASVAERRVKKELQKLRKDPLDGMSVEVGSSPTEWFVTIVGAAETVYSG
ETYRMRIRFPANYPIEAPEVVFVPPAPLHPHIYTNGHICLSILYDEWSPA
LTIQSVCLSILSMLSSCTAKVMFSTHYFGSREFRAVIGKQTNVHFCSGKR
PNKQYKKNEARCL* back to topmRNA from alignment at H-paniculata_contig788:18640..27510- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig788.15900.1 ID=mRNA_H-paniculata_contig788.15900.1|Name=mRNA_H-paniculata_contig788.15900.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8871bp|location=Sequence derived from alignment at H-paniculata_contig788:18640..27510- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGCGAACAAACCCCCCTCGTTACAAATTCAACACACACGACCAAAACAAG
ATGACCGCGAGTGTCGCTGAGCGCAGGGTGAAAAAGGAGCTGCAAAAGCT
GAGGAAAGATCCCTTAGACGGCATGTCTGTTGAAGTAGGCAGCTCGCCCA
CGGAGTGGTTCGTTACTATCGTTGGTAAGTGACTGCGTCGCTGTTTGTGT
CTGTGACCTGCTATTCGCCTGTTAGCGTTATTAGACTTTATTTACTGATC
TGATTGATTTGTCACGAACAGTCTCGCACTGGTTGCTGTCTGTGTGGAAA
TTTGGGTGTGGGAGAGGAGGGCGACCTGTCTTGTGCTTGAGGTTTGATTG
CAGGTGATAGTCACTGGTGGCATGTCAAAGATGCATGTACAAGGGTACAT
TGGAAGTGGTGGTAGCGGTGGTTGTGAGGCGCTGTTGATTTATATTTTAG
TTTCCTCAAGTCTGTATGTTGCAATTGCTTTCGGCCCAAATTGAAATACC
AACAGTTTTCAAGTACTGTTGTAAGGAACCGGAATTCACTCCTTGTTTGC
GAATACAAATATACTATAAGTATATATATTTTTAGTAAATATAAATATTT
AGCGTACACATCTCACGCAACATGCGAAACTCGTAGTGGAGTTCTGCCTC
ATGAGGTTTTTGAAGGTTTGACTGTTGGCTCGAGCACCCGTCGCGTGGAT
CAATACCTCGCTTGCAGTTATTAATAGCATACGTATTAACCTTCTAACCT
CAGGCTACATCGAGGATATTATGCTACTGCTGATTGTACGATTACAGATA
GCAGCAAATATCTCCAGGACGAACTCGATGCCGAAGCTGTCGGCTTAACT
CAACAACCCAATAGTGGTAATCTTACTCGAAACCTTGAGCCCGTGACGTA
CATATGGGTTCCGTCAACACACTCTCGGCTCCTATAATTTTTACCCGTTG
CTACTCAGGTCTTGGTTATCTTGGTTGAGTGCGATACATGCGACGTGCGG
AGAGATGGAACCCTTTCATAGTTTTTGTTTTGATGCTCAGGGCTATACTG
TATAATAAATGTACTGTAAACGCGGGGATCCACGCAGTCGAAAAACCAAG
CCGGAAAAAAGTTTCATGATGGAAGAGATGCTGAAATTGTCTCTGTTGCG
GTACGTACATACAACGAAGTGGTTCCTCCGAGTCGAGAGAATACAAAAAC
TGGTTCTGATGTTCTTTTTCAAAGGTTCAGTTTCTTGTCGAAATTTGCGC
CGCACCGCTTGTTCTGGGCGCAACACAGCTGGTGGACGAAAGTATATCCG
TACTGTCTGTAGCGACGTTGTTGAAACTGTCCGTCCCCAAAAATCGTAAA
TATAGCTCGACCAGACTGTAAAATAAACATGGTTGTTCTAATCGTTGGAC
CTGACGGCACGACCCACGCACCATGGTTAGAGGCCGAGCTAGTACACGAA
GAAAAATCAACCACCTGCCACCATATGTGCATTGGTCTCTGTGTGTATTG
TGTGTTGTGTATTGTTTTTTTATTGGAAGTTCCTGCTGGAAGTGTCGGTG
AACAGTGCCGAGCACAAGCCGTTTGCTTGTTGCAGAATTTCCTCTTCTCA
TTTTGAAGCGTGCCTTGTTTGTAGATATAGATATAGATATCTCAGTTCTT
GAATAGAAGACTTGATATTTACAACCACAACAATAGTAGAGACGTCTCAC
GCTTAGAGCAGTGTTGCGAGCCATGTTGGTTTTAGCCCTTGAGGTCACTC
AAATCTTTCACACATATTGTTGTAACGTTTGCCTGTCCTAATAAAAAATA
TCATGTCCCCATCTGGCACCACCCCTAATCTGCCTCGCATGCAATTGGTG
TCAACATCTGGAGATGTGGATTTTTTTTTTTCCCATGTGTTGGCCCTATG
TACCAAGTCAACCTGTGTGCGTTGGGCCCCCCTTCCAAAAAAAATCTTAT
GTTAACATACTGTAGTATTCTGCCCGATCGATGACTGGTGTGTTTTGCGC
GCGGGGGCCGGGTGGGGGGCGGGGCCGCGGTCGGGTAATGCTTGAGCAGG
CGCAGCAGAAACGGTTTATTCTGGGGAGACGTACCGTATGAGGATACGCT
TTCCCGCTAACTACCCTATTGAGGCACCCGAAGTTGTCTTTGTACCGGTG
AGTGACCTGAAATCCGCACTTTCTTAAACGGCGTATTTTGGATGGGGGGA
GGGGGGAATTTACTCTACGATAGAAAACATAACAGTAATCGTGAAAAGGC
AAAACGGAAGTATACTCAGCATCCTTAAATAAGCTGCTGGATTACTTATC
CACAAAATGAACAAATTCAGGGGGGGGGGGGCGGGTGGAGGTGCTGGAGT
GAGAAGAGAAACATCAGAGAACGGACAACAATCACGAACGTGTTTTTTTT
TTTTTTGTCTTGGTGGTTCCTGATTATGTAAAAGATATGTAAGATGCCTT
GTTTGTTTGTATGTATGTTTACTTTCTTCTTTTCTTCGGTTGTCTTTACA
GTGTCCTGTCCCATGACGTGTTGTGTCTGCTCCTGTGTCTTGTGGTGTCT
TTTATAGTTTGTCTCGCTCTTTTTGATATAGGGATGTGCTATGTGGTGGA
ACGGCATAGAATGGAGCCCGACTACCCTAGGGTTATGCGAGATGACATCT
CTGACAGTAGATACCCCCCCCCCCCCTCCTCTCTCCTTCCCTAGATATCA
CCTCGGGTAATAACTTGTTCAAATTTTAAGCGCCCAACTTTCATCGGGAG
ATACTCTATAGATACTACCGTGGTCATGATCTAATTGTGCTCATGAGTGT
ACGTAACTGAAGATTGACATCAGCTGCATAACCTCAACATGGGTACAATG
GATTTACTATATGAGCATTGGAGCTTTAGTTCGACGAACTGCGACAAGTG
GGTCAACTTGAGAATTAGAATATCGGTGGGTGAAAGGACTCCCCCCTTCC
AATCTTCCAGACATCACCCCCTCCCGGTGAAACTGTTTTGGCCCAAAAAT
GTCATCGCCCCCGGGGGGTGGTGATCTTGTGTAACCTACTGTCAGCAAGT
CGCGTTGTTTTTTCGGTTCCTTTCGTGCAATATGACGCTATTCATAGATT
TTGCTTGGATACAAGCGCTATGGAAGCTCCGATATTTTCCACGCCCCCCC
CCCCCCCTGACCTGGACCGCCTATGTTACATGGAAAGAGCATCAGCCGAC
TGGACGTTGAGGGCGATTCATTTTTAAGCGGATTTCGCTGTTGCTGAAAA
AGTATTTACAGGTACGAAATACGAACCAAATTACCTGAGCGTAGGCAGTC
CCCGTTCTCCACCAACAACGCCTGCTCCGCCCCCACCTTTATATATTCTT
TGCGTGCTGTTTTACGTCGGCCCGTATATCTGTTTTTGTTTGTCTGTTTG
TCTGTCTGTCTATTGCGTCAGCCGGCGCCGCTGCACCCGCACATATATAC
AAACGGGCACATTTGCCTTTCCATCTTGTACGATGAGTGGAGTCCCGCGC
TTACGATTCAGAGCGTGTGTCTAAGCATTCTCTCTATGCTCTCCAGCTGC
ACTGCCAAGGTGATGTTTTCCACACATTATTTCGGAAGCCGCGAATTCCG
CGCTGTTATCGGTAAGCAGACCAACGTTCATTTTTGTTCGGGAAAAAGAC
CCAATAAACAATATAAAAAAAATGAAGCACGTTGTCTATAAACGTCATAA
TTTGTTAATGCCTACTGCACTGGACCCTAACAAGGAGCCTGACGAAACCG
CTGCGAAAGGGGGGGGCGTTCAGAACAAACATGAGTATGACTATGACACG
TATCTCGCGACCTTGACCGCTTTACCTCCGCGGAGGCGTTGTTTAAATGT
TGAAAATTTCGTGCAGGATACTAATTCTAGGCAGGGATTGTACAGGGTTA
GGTGCCATGCGGGTTAATACTTGAATCAGACCATGAGCACTTGTTGTGTG
TGTAGTTTGCGTTATTGTTACTGGAAGACTTGCAGGATTTAATTTAATTT
AATTTTTTTGTTTTGCCGGATACAATGTTAATTTCTCGGTGGCAGTGAGG
AGCGTAATCGACGATAACGGCTGCGTTGAAATCACGATTAGGATGCCATT
GGTTTCGGCCCTTGTATTTCTTCTATTGTCAGCTTTTGCTGCCTAACCCT
GTACGTGCAACATTTCTGCAAACTTCGCGCCATCCCTTGCCTTACTTTTC
ATTGTGGTTTGTTTTCTTTTGTCGCCATACTGTATGTTTACTGTTGAGAA
CGGAAAAAGGAAGAACTTCAATCATGACCCGTGACACCTCAAACGAGGCA
TTTTTTGTTTTCCAGGGGGCCCTCGGTAGGATTACCGCAGTAATCCATGG
TATTCGGTACTCATAAAGATGCTGTGAAAATCTCGATTCCCCGTTACCGT
TGTCGTGGATGATAACGCTAAGCGCTATTTACCCCGACATCAGAACTAGA
CGTTACGCCCTTACCGCCACCACACGGTGAAACGACGGTATCGCACTGTT
TCTATACCACAGTTCCGTGGTACCGTCGTCATGGAATGCTTTTGATATTG
GCCGGGGGGGTTTAAAGTACCGTTCTTCAGTGCCGTTTATGGGGTCAAGT
AAAGCGGCAGTAAGAGTAGTCATCGCTATCGTATGTTTTTGTTAGTTGTA
TACTTTAATATACTAAGTGTGTCAGTGAAAGCCTCTTATGCTTGACATAT
GTTGCAGAGGCCAACCTGATTATATGTTCATGACCACGCTGATCCGGTGC
ATTGCTCCAGGATATTTGTAATAATAATACATATGTATATATATATATAT
ACATATATGTCTCTTGTGTGGGGTGGTTGGATGTTGGCATGGTGGATATG
TAATGACGGTGGTTGGTCATCGGTTCTTCGCTCTTCGTTTTTTCGTGTTT
TTCGGTCACGAGCAGGATGAATCACCATGTCATCAGCCGTCTCCTCGTTT
GTCTTTACCTCACTAGATACTATCATGCGAATCGCCAGCGATTATGGAGT
GCCGCATACCAATCACGCGAAGGAGTCGTGGATAGTGACTTCATCATCAC
TCGAGATTCTTTCAGCGATGTAGCGTGCTGTCTCCGAACTACCCACTGCG
GTTTCATCCTTCGCTTCGGCACCCATATTCCGAATATCGTACCGCACGGT
ACCTACCATAGAGACGAAGACCGTGCCGCGTCGCCCAAATACCGAATATC
GTTTACGGGACAAATGTCAACGAGAAGAAATACCATTTCGTGTAACTCGA
AAACTGAACGCCATTACTGAAAAATGACTAAGGAAATAAAAATCGTACCG
TTTTTGACAGATTCAAATACCGTTACCGAGGAGATCTTTCTCTGTTTATC
CCCCTCCCCTCTCTGTTCAAAAGTTGTTGATGAGTATCTAGTATGGTAAG
TGCAGGGTATCCAACCTTAGCGCGACAGCACACATACCGGAAAAATGCTA
AGAACCATGAGAGATTACGAATCCAATTGACTACTGCGCTAGGGATCGTG
GGGATGCTATGACATGTACTGTTTAGAGCGCGCTAACAAGAATTAACTTG
TGATTTCTCCTTTGGTCCTGCACCAGTTGACAGTGACTCTGGTTGATTCA
TTTGAATCTCGTTTGTGTTTTTGTAGGCTCTTGGTGAGCCTTACAGTTTC
AGAACTCCAGCTACCCGCACAACGTCTAGCCACAAACCGAAACCCGATTT
CAAATGTCGAGAATGTGAGTATAAGATGCCTCAATTTGATTTTATCTTTT
TTGTGACTAGTCGTTTTGTAAATGGCTTTAGTCCTGCGACTGGGAGGCTC
TTCGCGAGCCTCCCAGTGCACAAACGAGATTCAAACGAATCAACCTGTGT
CACACTGCCAATTGGTGCAGCACCAAAGGAGGAATTTATAAATCGACTCT
TGTTTGCGCAAACACCCTTGTTTGGCCAGATATTAAGGCTCGTACAACAA
CCGGTGACGCAAATTAACCGCGGGGAGTAGGTTGCCCCGTATGTTCCCAT
TTTATTACTGTCTGTGAACGGTCCTGAAAGCAGATTTTGGTATTGTTCCT
CTGGTTTGTTGACATCAGGGGCACTGAAATGTTTGAGGGGGATTCTGTAA
TTGGGTTATTTCTTTTGAAACGTCGAACAAACGATGGTGCAGTTGAAGCG
GGCGAGTGAGTACATCACGATGAACGAAACCGAGCTCCAACAAAAAAAAC
GTTGGTCTTGAGTGATGTCCATTTGTCTGCTTTTTACAAGGCCTCTCACG
GTACCACGGAGTCCTCATGGGACAGGACGACACGAGACGGCGGTCCCGTC
TCATCCTGTCGGTTTTCTGGAGGACGGTGTTCCGTTCCGTCGTAGTGTTT
AGAGGGCTGACCCCGTCCCGTCAACAACGAGAAAAAATCCTCTCCTTACG
GGGCTAAGAGTTATGGTCTTGTCAAGTCCCCGTTCCGTCTTGTCTGGTTC
TCACGGGACAGGGTGCCCCGTCCTCAACGGGAAAACTTATCCCGTTAACC
GTGTTTGCGTCTCTGAGAGGAAGGATGCTCTATTTGTTCCGTGGGAATGT
TTATGGTACAACATATTCGGATTTTGGATTATGCTTTACTAATGCTCGGA
GGCATGTATGTACCTACTGTACTGTGAGAGCAAGTTGGATGTTATGATCT
TTCGGTTACACCCTGGCGCGGTGCCACCTTTAGATTTAGATCTTCATGTC
CATCCATGATGATATGCTTGAAACAGCACCGTCATGATTCTCTTGTCGTT
TTCACGCTTTATTCAACCGAGTCAGCACACTGTCGGGACGTAACTGTATA
CAATCTTTTATCTTGTTTTGTTATTATCCTTGACAAATGAAGTTAGAGGT
GCGCCGCATAGACGCAACTACGATGGGTGCCATCATGTGATTCGTACAGG
TATAATAGATGCTGAGATTCCCCACGTTGTCTTCTTCTGTCCCGTTCCAT
TCTTACGGGAGGGTCCTATGATAATCCCATCCTGTCACGTTGAAGTCTTG
GAGAATCGGTTCCATCCCATCCGAAAGTCAAATGTCCCGGTCGCGTCCTG
TCGGTACTTCGAGAGCCATGGTCCCGTCCTGTCCTGTGGTCCCGTGATAA
GCCCTAGATTTTTCTCTATACCTCTGCAGCGCTCACAAACCTTGTTGCCC
ACGTTCACGTGTCGCCAACTGCTGCGAGTCAGAAAATGTTAAAATGTGCG
GATCAAGCGTCGTATTCCGGGGTCTCGAATAGAATTCGTCTCGACCACTG
GATCTTGAAAAAGCGTTGCGTTTCTGAACATCTTCATATTCCAAGTTGCG
TGAACACCACGGTTTTGATATTCTATTTTCTTCCTTCGCGATGAGTAAGC
TCAGCTCTTGCTCCTAGAAAGTAAGACTCGCATCCTCGGACCAGAGATCA
TCAGCGTCATACCGATACCGTTTACCCGCATCTATTTTACAACACGACTA
GTCTCCACACGTATCGTTTGTGACGCATAGCATTTCGCACTAGTACGTTA
TTTTCCGTAGACGTCAGTCGTGGCTATTGCTCGGGCCCATCGTAATTCCA
ACTTACCTCGGTGCCCCAGTGAGACGGGTATGCCCCTTCCCAAGGTGTAT
TATCAGTTCTGGTCTCTTGATTGCCTGTCGTTCAAGGGGTACACTCGCGC
TATATATAAGAAGGATTTTCACCTCAGTAGTGTAAAAATGCATCACGCAT
ACACACAAACACGCATACGGACAATATTTTTCATATGTTGGACCATCTCT
CACGTGCATCGGAAAGTTAATTGTTTGAGGCCGTCAGATTCTTGTCTTAC
TCACCAGTTCTGAAGTTTGTGCAACCGATTATGTTGAAAAAAATCCAAGT
CAAGAAGACCAGAGATTTTTCAACGCCTCCAGAACCTCCCTGAAACAAGC
GGCAGCCGCCGCCCAACCACCTCCCCCCTTTTATTTTCGGGTGCTAAATA
TACAGGAGAAACCATCAGATAATGACCAGTACGTGAAGAAGATTGGGAAG
GGTTCTCCCAAGACCACTATTTGGGCTTTCCACGACGACACGGTCTAACC
ACGGTCTAATCAACCAGCTCGCCTCATCTTCATTGAAAGAGGCTGGAGGG
CAGGGGGGTTAAATGTGTCGCGTGCGTATGGATGTCATCGTAGATAGTGG
GGGATGGTCAGCGACGGCTTGAGGGACTAGCGCGGAGCGTAAGAGCGTTG
CCTGAGGTTGATTTTGTCTCGGGGTGGGGGGAGGGATGGGCATCCATGCT
ATGAACGGTTTGGAATTCTGTGTAACGTTCCCAGGCAGTTTTTCCTTCTC
TTTGGAACAAGACGTTGCTCTCATTCAGAAATTTCACAGGTAGGGCTGTT
GGACTTACAGGCCACGCGAAGAAGAACAGCAAGAAGTGTCTCAGTGACCC
TTGCAATTTGTAAGTGCGTCGAACGAACATGTGGTGAGAAGCAGAATAAT
TGTCCGTCATTGGTACCGTTTGGTGTCGCATGAGAGATGGAGCACAGGGC
GGCGCATTTAGGTACATACATGAATGAGGACCAAGTTGCGATTATGGACA
ATAACGTTTCCCCATAGCTTTTGGTTTCAGAGTTTGTTTTTTGAGAAGAA
GAATTGTAATCTTCGTGAACAAATAACATTGAGATGGTAATTTTTTTCCC
AGGGGTTTCCACTGAGGCGTTTTTGGTGTCAACGTTATATCGCTCAAGGG
ACGGTTTTTTTAATATGATTTTTGAAGCCATCTTTTATGTTCTCAGACGT
TTTAGTTTTAGCTTCGGAACAGTTTTTTCCAACAGTTACACTTGAATGTT
CTCCAATTTCGCATCAAGACCCACTGCACATGTTATTAATTGAAACAAGG
AGATTCTCTTTTCCTCTCTCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig788:18640..27510- >mRNA_H-paniculata_contig788.15900.1 ID=mRNA_H-paniculata_contig788.15900.1|Name=mRNA_H-paniculata_contig788.15900.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=984bp|location=Sequence derived from alignment at H-paniculata_contig788:18640..27510- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACCGCGAGTGTCGCTGAGCGCAGGGTGAAAAAGGAGCTGCAAAAGCT
GAGGAAAGATCCCTTAGACGGCATGTCTGTTGAAGTAGGCAGCTCGCCCA
CGGAGTGGTTCGTTACTATCGTTGATGACCGCGAGTGTCGCTGAGCGCAG
GGTGAAAAAGGAGCTGCAAAAGCTGAGGAAAGATCCCTTAGACGGCATGT
CTGTTGAAGTAGGCAGCTCGCCCACGGAGTGGTTCGTTACTATCGTTGGC
GCAGCAGAAACGGTTTATTCTGGGGAGACGTACCGTATGAGGATACGCTT
TCCCGCTAACTACCCTATTGAGGCACCCGAAGTTGTCTTTGTACCGGCGC
AGCAGAAACGGTTTATTCTGGGGAGACGTACCGTATGAGGATACGCTTTC
CCGCTAACTACCCTATTGAGGCACCCGAAGTTGTCTTTGTACCGCCGGCG
CCGCTGCACCCGCACATATATACAAACGGGCACATTTGCCTTTCCATCTT
GTACGATGAGTGGAGTCCCGCGCTTACGATTCAGAGCGTGTGTCTAAGCA
TTCTCTCTATGCTCTCCAGCTGCACTGCCAAGGTGATGTTTTCCACACAT
TATTTCGGAAGCCGCGAATTCCGCGCTGTTATCGGTAAGCAGACCAACGT
TCATTTTTGTTCGGGAAAAAGACCCAATAAACAATATAAAAAAAATGAAG
CACGTTGTCTATAACCGGCGCCGCTGCACCCGCACATATATACAAACGGG
CACATTTGCCTTTCCATCTTGTACGATGAGTGGAGTCCCGCGCTTACGAT
TCAGAGCGTGTGTCTAAGCATTCTCTCTATGCTCTCCAGCTGCACTGCCA
AGGTGATGTTTTCCACACATTATTTCGGAAGCCGCGAATTCCGCGCTGTT
ATCGGTAAGCAGACCAACGTTCATTTTTGTTCGGGAAAAAGACCCAATAA
ACAATATAAAAAAAATGAAGCACGTTGTCTATAA back to top
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