mRNA_H-paniculata_contig7853.15880.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7853.15880.1
Unique NamemRNA_H-paniculata_contig7853.15880.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig7853.15880.1 vs. uniprot
Match: D7FJT1_ECTSI (Alpha-mannosidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJT1_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 7.190e-118
Identity = 178/224 (79.46%), Postives = 198/224 (88.39%), Query Frame = 1 
Query:    1 AGFEALYFGRIDYQDREKRIAESDMEMVWRASRSLEEKAQIFTGVFHSGNYGPPVGFCFDQACQDEPMMGDPLMADENVERRAGDFADACQELGQHTRGDHVMLQMGGDFGFENANAWYKNLDMLIEAVNREGRVNVFYSTPEQYTKSKHASGLEWSVKKDDFFPYADCPHSTCRDKIALEKPSPEHHCYWTGYFTSRPGLKRLERVTSAYLQAARQLHAFTAA 672
            AGF+ALYFGRIDYQDREKR+AE DMEM+WRASRS E+ AQIFTGVFHSGNYGPPVGFCFDQACQDEPMM DPLM D NVERRA DFADACQELG++T GD VMLQMGGDFGFENA+AW+KNL++L+ AVN+EGRVNVF+STP+ YT++KHASGLE SVKKDDFFPYADCP S C  ++ L   +P+H CYWTGYFTSRPGLKRLERVTS YLQAARQL A   A
Sbjct:  176 AGFDALYFGRIDYQDREKRVAEKDMEMMWRASRSSEQDAQIFTGVFHSGNYGPPVGFCFDQACQDEPMMDDPLMVDYNVERRASDFADACQELGRNTLGDDVMLQMGGDFGFENADAWFKNLEILMAAVNKEGRVNVFFSTPQLYTEAKHASGLELSVKKDDFFPYADCPAS-CSKELELRANTPQH-CYWTGYFTSRPGLKRLERVTSGYLQAARQLLALAGA 397
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BLAST of mRNA_H-paniculata_contig7853.15880.1 vs. uniprot
Match: A0A6H5L421_9PHAE (Alpha-mannosidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L421_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 3.040e-112
Identity = 176/238 (73.95%), Postives = 194/238 (81.51%), Query Frame = 1 
Query:    1 AGFEALYFGRIDYQDREKRIAESDMEMVWRASRSLEEKAQIFTGVFHSGNYGPPVGFCFDQACQDEPMMGDPLMADENVERRAGDFADACQELGQHTRGDHVMLQMGGDFGFENANAWYKNLDMLIEAVNREGRVNVFYSTPEQYTKSKHASGLEWSVKKDDFFPYADCP--------------HSTCRDKIALEKPSPEHHCYWTGYFTSRPGLKRLERVTSAYLQAARQLHAFTAA 672
            AGF+ALYFGRIDYQDREKRIAE DMEM+WRASRS E+ AQIFTGVFHSGNYGPPVGFCFDQACQDEPM     MAD NVERRA DFADACQELG++T GD VMLQMGGDFGFENA+AW+KNL++L+ AVN+EGRVNVF+STP+ YT++KHASGLE SVKKDDFFPYADCP              HS+C  K+     +   HCYWTGYFTSRPGLKRLERVTS YLQAARQL A   A
Sbjct:  180 AGFDALYFGRIDYQDREKRIAEKDMEMMWRASRSSEQDAQIFTGVFHSGNYGPPVGFCFDQACQDEPMXXXXXMADYNVERRASDFADACQELGRNTLGDDVMLQMGGDFGFENADAWFKNLEILMAAVNKEGRVNVFFSTPQLYTEAKHASGLELSVKKDDFFPYADCPVRVAMLVESCRRCQHSSCWKKLE-SGANIRQHCYWTGYFTSRPGLKRLERVTSGYLQAARQLLALAGA 416
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BLAST of mRNA_H-paniculata_contig7853.15880.1 vs. uniprot
Match: I2CPA4_NANGC (Lysosomal alpha-mannosidase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPA4_NANGC)

HSP 1 Score: 256 bits (654), Expect = 1.170e-80
Identity = 128/222 (57.66%), Postives = 150/222 (67.57%), Query Frame = 1 
Query:    4 GFEALYFGRIDYQDREKRIAESDMEMVWRASRSLEEKAQIFTGVFHSGNYGPPVGFCFDQACQDEPMMGDPLMADENVERRAGDFADACQELGQHTRGDHVMLQMGGDFGFENANAWYKNLDMLIEAVNREGRVNVFYSTPEQYTKSKHASGLEWSVKKDDFFPYADCPHSTCRDKIALEKPSPEHHCYWTGYFTSRPGLKRLERVTSAYLQAARQLHAFTA 669
            GFEALYFGRID+QD ++R  E  +E VW AS SL  +A +FTGVF SGNYGPP GFCFDQ C D P+  +P + DENV+RR  +F D   EL +   G+++MLQMG DF FE+A  WYKNLD LI  VNR+GR+NV YSTP +YT ++H   L +  K DDFFPYAD PH                  YWTGYFTSR  LKRLERVTSAYLQ ARQL A  A
Sbjct:  211 GFEALYFGRIDFQDMKQRKEEQRLEFVWDASPSLGPEAAVFTGVFPSGNYGPPPGFCFDQFCADAPINDNPSLTDENVQRRVDEFVDRVLELKEFYPGNNIMLQMGSDFQFEHARLWYKNLDKLIHYVNRDGRLNVCYSTPIEYTLARHREELAFGTKTDDFFPYADGPHQ-----------------YWTGYFTSRASLKRLERVTSAYLQPARQLQALAA 415
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BLAST of mRNA_H-paniculata_contig7853.15880.1 vs. uniprot
Match: A0A8B7D783_HYDVU (lysosomal alpha-mannosidase-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7D783_HYDVU)

HSP 1 Score: 225 bits (573), Expect = 1.180e-68
Identity = 106/211 (50.24%), Postives = 136/211 (64.45%), Query Frame = 1 
Query:    7 FEALYFGRIDYQDREKRIAESDMEMVWRASRSLEEKAQIFTGVFHSGNYGPPVGFCFDQACQDEPMMGDPLMADENVERRAGDFADACQELGQHTRGDHVMLQMGGDFGFENANAWYKNLDMLIEAVNREGRVNVFYSTPEQYTKSKHASGLEWSVKKDDFFPYADCPHSTCRDKIALEKPSPEHHCYWTGYFTSRPGLKRLERVTSAYLQ 639
            F+  +FGRIDY D+EKR  E  MEMVW+ S++ +  +QIFTGV ++G Y PP GFC+D+ C D P+  +P + D NV+ R   F +   E  +  + +H+ML MG DF FENA+ W+KNLD LI  VN++GRVNVFYSTP +Y K+ H +  EW VKKDDFFPYA CPH                 CYWTGYFTSRP  K  ER ++  LQ
Sbjct:  180 FDGFFFGRIDYADKEKRKKEQRMEMVWQGSQNYKSASQIFTGVLYNG-YDPPPGFCYDEFCADPPIQDNPTLFDMNVKERVDKFVEVTCEQAKSYQTNHIMLTMGSDFQFENAHRWFKNLDKLIHYVNQDGRVNVFYSTPSRYLKALHDADKEWEVKKDDFFPYAHCPH-----------------CYWTGYFTSRPSFKGYERESNFILQ 372
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BLAST of mRNA_H-paniculata_contig7853.15880.1 vs. uniprot
Match: A0A0D2WP12_CAPO3 (Alpha-mannosidase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WP12_CAPO3)

HSP 1 Score: 231 bits (588), Expect = 1.480e-66
Identity = 112/218 (51.38%), Postives = 140/218 (64.22%), Query Frame = 1 
Query:    7 FEALYFGRIDYQDREKRIAESDMEMVWRASRSLEEKAQIFTGVFHSGNYGPPVGFCFDQACQDEPMMGDPLMADENVERRAGDFADACQELGQHTRGDHVMLQMGGDFGFENANAWYKNLDMLIEAVNREGRVNVFYSTPEQYTKSKHASGLEWSVKKDDFFPYADCPHSTCRDKIALEKPSPEHHCYWTGYFTSRPGLKRLERVTSAYLQAARQLHA 660
            F+  +FGRIDYQD+++R+ + DMEM+WR S SL   ++IF GV ++G Y PP GFCFDQ C D+ +  D  + D NVE R  DF  AC +  QH R +++ L MG DF + NA  W+KNLD LI  VN +GRVNVFYSTP  Y  S HA+ L WS K DDFFPYAD PH+                 YWTGYFTSR  LK  ER +SA+LQ+ +QL A
Sbjct:  191 FDGFFFGRIDYQDKDRRLKDKDMEMIWRGSSSLGAASEIFAGVNYNG-YNPPDGFCFDQYCGDDSIQDDFRLEDVNVEERVNDFVAACLDQAQHYRTNNIQLTMGSDFQYSNARLWFKNLDKLIHYVNADGRVNVFYSTPSIYLDSLHAANLTWSYKTDDFFPYADGPHA-----------------YWTGYFTSRIALKGFERTSSAFLQSCKQLEA 390
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BLAST of mRNA_H-paniculata_contig7853.15880.1 vs. uniprot
Match: T2MJR0_HYDVU (Alpha-mannosidase (Fragment) n=4 Tax=Hydra vulgaris TaxID=6087 RepID=T2MJR0_HYDVU)

HSP 1 Score: 230 bits (587), Expect = 1.600e-66
Identity = 109/218 (50.00%), Postives = 141/218 (64.68%), Query Frame = 1 
Query:    7 FEALYFGRIDYQDREKRIAESDMEMVWRASRSLEEKAQIFTGVFHSGNYGPPVGFCFDQACQDEPMMGDPLMADENVERRAGDFADACQELGQHTRGDHVMLQMGGDFGFENANAWYKNLDMLIEAVNREGRVNVFYSTPEQYTKSKHASGLEWSVKKDDFFPYADCPHSTCRDKIALEKPSPEHHCYWTGYFTSRPGLKRLERVTSAYLQAARQLHA 660
            F+  +FGRIDY D+EKR  E  MEMVW+ S++ +  +QIFTGV ++G Y PP GFC+D+ C D P+  +P + D NV+ R   F +   E  +  + +H+ML MG DF FENA+ W+KNLD LI  VN++GRVNVFYSTP +Y K+ H +  EW VKKDDFFPYA CPH                 CYWTGYFTSRP  K  ER ++  LQA +Q+ A
Sbjct:  185 FDGFFFGRIDYADKEKRKKEQRMEMVWQGSQNYKSASQIFTGVLYNG-YDPPPGFCYDEFCADPPIQDNPTLFDMNVKERVDKFVEVTCEQAKSYQTNHIMLTMGSDFQFENAHRWFKNLDKLIHYVNQDGRVNVFYSTPSRYLKALHDADKEWEVKKDDFFPYAHCPH-----------------CYWTGYFTSRPSFKGYERESNFILQACKQIEA 384
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BLAST of mRNA_H-paniculata_contig7853.15880.1 vs. uniprot
Match: UPI00109BABFD (lysosomal alpha-mannosidase n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BABFD)

HSP 1 Score: 227 bits (578), Expect = 1.880e-66
Identity = 107/218 (49.08%), Postives = 142/218 (65.14%), Query Frame = 1 
Query:    7 FEALYFGRIDYQDREKRIAESDMEMVWRASRS--LEEKAQIFTGVFHSGNYGPPVGFCFDQACQDEPMMGDPLMADENVERRAGDFADACQELGQHTRGDHVMLQMGGDFGFENANAWYKNLDMLIEAVNREGRVNVFYSTPEQYTKSKHASGLEWSVKKDDFFPYADCPHSTCRDKIALEKPSPEHHCYWTGYFTSRPGLKRLERVTSAYLQAARQL 654
            F+  +FGRIDY D++ R+ +  MEM+WR S+S  L + + IFTGV ++G Y PP GFCFDQ C+D+PMM DP + D NV+ +  DF +   +  +H + +++ML MG DF +ENAN W+KNLD+L++ VN++ RV+ FYSTP  Y    H S L W +K DDFFPYADCPH                 CYWTGYFTSRP LKR  R  +  LQA +QL
Sbjct:  188 FDGFFFGRIDYADKKARLQDQRMEMIWRGSKSGNLGKXSDIFTGVLYNG-YNPPPGFCFDQFCKDQPMMXDPNLQDMNVKEKTEDFIEYVCDQAKHYKSNNIMLTMGSDFMYENANLWFKNLDILMKYVNQDSRVHAFYSTPTTYLDMVHNSNLTWGLKTDDFFPYADCPH-----------------CYWTGYFTSRPALKRYVRYNNNLLQACKQL 387
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BLAST of mRNA_H-paniculata_contig7853.15880.1 vs. uniprot
Match: A7SFA1_NEMVE (Alpha-mannosidase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SFA1_NEMVE)

HSP 1 Score: 229 bits (585), Expect = 3.820e-66
Identity = 109/218 (50.00%), Postives = 140/218 (64.22%), Query Frame = 1 
Query:    7 FEALYFGRIDYQDREKRIAESDMEMVWRASRS--LEEKAQIFTGVFHSGNYGPPVGFCFDQACQDEPMMGDPLMADENVERRAGDFADACQELGQHTRGDHVMLQMGGDFGFENANAWYKNLDMLIEAVNREGRVNVFYSTPEQYTKSKHASGLEWSVKKDDFFPYADCPHSTCRDKIALEKPSPEHHCYWTGYFTSRPGLKRLERVTSAYLQAARQL 654
            F+  +FGRIDY D+  R+ +  MEMVWR S+S  L + + IFTGV ++G Y PP GFCFDQ C D+P+  DP + DENV++R  +F     E G   + +++M+ MG DF +ENAN WYKNLD LI  VN++ RV  FYSTP  Y ++ HA+ L W +K DDFFPYADCPH                 CYWTGYFTSRP LKR  R+ +  LQA +QL
Sbjct:  190 FDGFFFGRIDYDDKTLRLKQQRMEMVWRGSKSGNLGKNSDIFTGVLYNG-YNPPPGFCFDQFCSDQPIQDDPRLYDENVKQRVEEFIKLACEQGSQYKSNNIMMTMGSDFMYENANLWYKNLDKLIAHVNQDSRVRAFYSTPTTYLEALHAANLTWGLKTDDFFPYADCPH-----------------CYWTGYFTSRPALKRYSRLNNNLLQACKQL 389
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BLAST of mRNA_H-paniculata_contig7853.15880.1 vs. uniprot
Match: UPI000A2A7219 (lysosomal alpha-mannosidase n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7219)

HSP 1 Score: 225 bits (573), Expect = 7.570e-65
Identity = 106/221 (47.96%), Postives = 142/221 (64.25%), Query Frame = 1 
Query:    7 FEALYFGRIDYQDREKRIAESDMEMVWRASRS--LEEKAQIFTGVFHSGNYGPPVGFCFDQACQDEPMMGDPLMADENVERRAGDFADACQELGQHTRGDHVMLQMGGDFGFENANAWYKNLDMLIEAVNREGRVNVFYSTPEQYTKSKHASGLEWSVKKDDFFPYADCPHSTCRDKIALEKPSPEHHCYWTGYFTSRPGLKRLERVTSAYLQAARQLHAF 663
            F+  +FGRIDY D++ R+ +  MEM+WR S+S  L + + IF+GV ++G YGPP GFCFDQ+C+D+PMM DP + D N E +A  F +   +  +H   ++++L MG DF +ENA  W+KNLD+L++ VN++ RV+ FYSTP  Y    H S L W +K DDFFPYADCPH                 CYWTGYFTSRP LKR  R  +  LQA +QL  F
Sbjct:   79 FDGFFFGRIDYADKKARLQDQRMEMIWRGSKSGNLGKSSDIFSGVLYNG-YGPPPGFCFDQSCKDQPMMXDPNLZDMNXEEKAAKFIEYXCBQAKHYXSNNIILTMGEDFNYENAXLWFKNLDILMKYVNQDSRVHAFYSTPTTYLDMVHDSNLTWGLKTDDFFPYADCPH-----------------CYWTGYFTSRPALKRYVRYNNNLLQACKQLEVF 281
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BLAST of mRNA_H-paniculata_contig7853.15880.1 vs. uniprot
Match: A0A7M5X074_9CNID (Alpha-mannosidase n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X074_9CNID)

HSP 1 Score: 223 bits (568), Expect = 6.770e-64
Identity = 105/216 (48.61%), Postives = 138/216 (63.89%), Query Frame = 1 
Query:    7 FEALYFGRIDYQDREKRIAESDMEMVWRASRSLEEKAQIFTGVFHSGNYGPPVGFCFDQACQDEPMMGDPLMADENVERRAGDFADACQELGQHTRGDHVMLQMGGDFGFENANAWYKNLDMLIEAVNREGRVNVFYSTPEQYTKSKHASGLEWSVKKDDFFPYADCPHSTCRDKIALEKPSPEHHCYWTGYFTSRPGLKRLERVTSAYLQAARQL 654
            F+  +FGRID +D++KR+ E  MEM+WR SR+  + +QIFTGV ++G YGPP GFCFD  C D P+  DP + D NV+ R   F     +  +  + +H+ML MG DF ++NA  W+KNLD LI+ VNR+GRVNVFYS+P +Y K+ H +   W VK DDFFPYA CPH                 CYWTGYFTSRP LK   R ++  LQA +Q+
Sbjct:  179 FDGFFFGRIDQEDKDKRLKEQRMEMIWRGSRNYGKDSQIFTGVTYNG-YGPPAGFCFDDYCADPPIQDDPRLYDNNVKERVDLFVQETCDQAKSYKTNHIMLTMGSDFQYQNALKWFKNLDKLIKYVNRDGRVNVFYSSPSRYLKALHNAKKVWEVKTDDFFPYAHCPH-----------------CYWTGYFTSRPALKAYIRESNGMLQACKQM 376
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7853.15880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJT1_ECTSI7.190e-11879.46Alpha-mannosidase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5L421_9PHAE3.040e-11273.95Alpha-mannosidase n=1 Tax=Ectocarpus sp. CCAP 1310... [more]
I2CPA4_NANGC1.170e-8057.66Lysosomal alpha-mannosidase (Fragment) n=1 Tax=Nan... [more]
A0A8B7D783_HYDVU1.180e-6850.24lysosomal alpha-mannosidase-like n=1 Tax=Hydra vul... [more]
A0A0D2WP12_CAPO31.480e-6651.38Alpha-mannosidase n=1 Tax=Capsaspora owczarzaki (s... [more]
T2MJR0_HYDVU1.600e-6650.00Alpha-mannosidase (Fragment) n=4 Tax=Hydra vulgari... [more]
UPI00109BABFD1.880e-6649.08lysosomal alpha-mannosidase n=1 Tax=Exaiptasia dia... [more]
A7SFA1_NEMVE3.820e-6650.00Alpha-mannosidase n=1 Tax=Nematostella vectensis T... [more]
UPI000A2A72197.570e-6547.96lysosomal alpha-mannosidase n=1 Tax=Exaiptasia dia... [more]
A0A7M5X074_9CNID6.770e-6448.61Alpha-mannosidase n=1 Tax=Clytia hemisphaerica Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7853contigH-paniculata_contig7853:2600..10151 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.4
Seed ortholog evalue3.7e-101
Seed eggNOG ortholog2880.D7FJT1
KEGG koko:K01191,ko:K12311
KEGG ReactionR08717,R08718
KEGG Pathwayko00511,ko04142,map00511,map04142
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0005575,GO:0005576,GO:0005615,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005774,GO:0005775,GO:0005975,GO:0005996,GO:0006013,GO:0006464,GO:0006517,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008150,GO:0008152,GO:0009056,GO:0009100,GO:0009311,GO:0009313,GO:0009505,GO:0009987,GO:0012505,GO:0015923,GO:0016020,GO:0016052,GO:0016192,GO:0016787,GO:0016798,GO:0019318,GO:0019538,GO:0030141,GO:0030312,GO:0031090,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034774,GO:0035578,GO:0036211,GO:0036230,GO:0042119,GO:0042582,GO:0043170,GO:0043202,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044421,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0048046,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071704,GO:0071944,GO:0097708,GO:0098588,GO:0098805,GO:0099503,GO:1901135,GO:1901564,GO:1901575
EggNOG free text desc.mannose metabolic process
EggNOG OGsKOG1959@1,KOG1959@2759
EC3.2.1.24
COG Functional cat.G
CAZyGH38
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Exons7
Model size672
Cds size672
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930977.4336388-CDS-H-paniculata_contig7853:2599..27291622930977.4336388-CDS-H-paniculata_contig7853:2599..2729Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 2600..2729 +
1691481535.492684-CDS-H-paniculata_contig7853:2599..27291691481535.492684-CDS-H-paniculata_contig7853:2599..2729Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 2600..2729 +
1622930977.4473758-CDS-H-paniculata_contig7853:6209..63521622930977.4473758-CDS-H-paniculata_contig7853:6209..6352Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 6210..6352 +
1691481535.5054216-CDS-H-paniculata_contig7853:6209..63521691481535.5054216-CDS-H-paniculata_contig7853:6209..6352Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 6210..6352 +
1622930977.4630826-CDS-H-paniculata_contig7853:6871..70061622930977.4630826-CDS-H-paniculata_contig7853:6871..7006Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 6872..7006 +
1691481535.5156279-CDS-H-paniculata_contig7853:6871..70061691481535.5156279-CDS-H-paniculata_contig7853:6871..7006Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 6872..7006 +
1622930977.4749782-CDS-H-paniculata_contig7853:7649..77511622930977.4749782-CDS-H-paniculata_contig7853:7649..7751Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 7650..7751 +
1691481535.5254152-CDS-H-paniculata_contig7853:7649..77511691481535.5254152-CDS-H-paniculata_contig7853:7649..7751Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 7650..7751 +
1622930977.4858441-CDS-H-paniculata_contig7853:8515..85521622930977.4858441-CDS-H-paniculata_contig7853:8515..8552Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 8516..8552 +
1691481535.5349317-CDS-H-paniculata_contig7853:8515..85521691481535.5349317-CDS-H-paniculata_contig7853:8515..8552Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 8516..8552 +
1622930977.5018916-CDS-H-paniculata_contig7853:9679..96931622930977.5018916-CDS-H-paniculata_contig7853:9679..9693Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 9680..9693 +
1691481535.5450132-CDS-H-paniculata_contig7853:9679..96931691481535.5450132-CDS-H-paniculata_contig7853:9679..9693Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 9680..9693 +
1622930977.5241423-CDS-H-paniculata_contig7853:10040..101511622930977.5241423-CDS-H-paniculata_contig7853:10040..10151Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 10041..10151 +
1691481535.562824-CDS-H-paniculata_contig7853:10040..101511691481535.562824-CDS-H-paniculata_contig7853:10040..10151Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7853 10041..10151 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7853.15880.1prot_H-paniculata_contig7853.15880.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7853 2600..10151 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7853.15880.1

>prot_H-paniculata_contig7853.15880.1 ID=prot_H-paniculata_contig7853.15880.1|Name=mRNA_H-paniculata_contig7853.15880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp
AGFEALYFGRIDYQDREKRIAESDMEMVWRASRSLEEKAQIFTGVFHSGN
YGPPVGFCFDQACQDEPMMGDPLMADENVERRAGDFADACQELGQHTRGD
HVMLQMGGDFGFENANAWYKNLDMLIEAVNREGRVNVFYSTPEQYTKSKH
ASGLEWSVKKDDFFPYADCPHSTCRDKIALEKPSPEHHCYWTGYFTSRPG
LKRLERVTSAYLQAARQLHAFTAA
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mRNA from alignment at H-paniculata_contig7853:2600..10151+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7853.15880.1 ID=mRNA_H-paniculata_contig7853.15880.1|Name=mRNA_H-paniculata_contig7853.15880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7552bp|location=Sequence derived from alignment at H-paniculata_contig7853:2600..10151+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCGGGTTCGAGGCGCTCTACTTCGGCCGCATCGACTACCAAGACCGGGA
GAAGCGTATAGCCGAGAGCGACATGGAGATGGTTTGGAGAGCGAGCCGCT
CTCTCGAGGAGAAGGCTCAGATTTTCACCGGTGGGATGGATGTCTATTTA
TATTTACCGAGTATATGTCACACGTTGGACAGGATAGAACAGAACAGAGC
ACCCCATGACAAAATGTAGCTTAAGAGAGCGAAATAGAAAGGATGTATGA
GAGTTAAGTGTGCCACTGAATATAGAATTTTTAATCATTTTTTTTATGCT
ACTCATGCAAGTATACTCACTTTTGATATCTCCATTTTAAACTTACGTCT
TAACTTAAAAAAATACAAAAGGTTCTGCTACCATAAAATAAATATCATAT
TTTATCTAAATTTTCGGTAATAGTTTTAAGCCCACTAAATTAACGAGACT
TTTGCTCTAGGCCAGTGAGCTGTTACGCTGTCTTTAAAAGAATGGCTGCT
TCCAAGCCTACCTTCTGGCTGTCTTTGAACCCAAATCACCTTTTACACTG
AAACTATTTTGTGGACCTTAACCAGTAGTCTGGGCTGTTTCCCTCTTGAG
TAAGAATCTTAGCATTCTTACTCTGTCTACCCTAAATATACGTAATTAGT
ATTCGGAGTTTGCCAAAGTTCTCTATTCGTTTTTCTGGATGTTATTGCAA
AGAGAGGCAACATTGTTCCGTTTGCATGCACAGGGACCTACAGCGACAAG
GATGAATGCTGTTCTGCGCGCGGTGTGTGTAAAAAATCGCCGAAATTTCG
AAGAGCGTGAAGAATTTGATGTGTCCGGCGTGTGGGAGATATCACATACA
TGTGTGTTTTTTCAACTCTTTGGAAGGAAGCCCGTGACCGACCTCGATCA
GCTGTTCAAATGTATTTGGCTATTATTTAGTCGTGTTTTTTGCGAGTTAA
ATATAAACACTTCTGTGTGTTGCAACAATAGCTATTCTCGATCTGCGCTG
AATCCAAGAGGATGTGTAGAAATGAACAGTCTTTTTTTATTTGTTTTTTG
ATACTCCAGTTCTGTTCGGTATTCGAGGTAACTGGTCATGATCCATTTTT
GGTCCATCAGTCAGTATCCAGAGTTAAGTTATTTATTTTTTTGTTTGTTT
ACTGTAATAGTGGACACGGCACAGGCTACCTCAGTAGAACCGACTGACTA
CATCGATGGTGATGATGGTGATGATGATGTTGCGGTACCTCTAACCCACG
CTCACGGACTCGCTTCGCTCGCCTTGACTCGCTTAGGCTCGCATGTCGGC
AGATTTAACGTTCAACTTGTTGCAAATTATTTTTGTGTACATGTGCAGAA
TATTCGATGATCTCCGATGAACGCTGATACGGCTTCCCCCTATGACTCGC
AAGTCGCAGGCGTATCGTCCTCCCTTCAAAAAATATTTATATCCTCTTTG
TTTATCTTTGTTATCTTACCTCGCTTTGCATTCATCTCTCGGACTGTGTT
ACCTTTTCTACCATTACTAAAAAAAAGTTTTGTGCTTGGCCTGATTTGGA
TATGATATGAGCTCATGGGGCTCTCGTACCCAGGCGGGGATGAAGTATTG
GGTAATTCACCTGGTACTTCTCTATAACGTCTTTTATGCTTCTCTGGACC
TGTCTGATTGTAGAAACCGAACGGTTACATAGAACACCGTTATAATATCA
AAATTTTGTGGAGCCGAAGCAACTTGGTCGAACCGCAACAAGTTGAACCG
CATATCTGGAACTGCCTGTACATCTAGAACACATTCCACATGTTACCCTC
CTTGTCCTGTCATAGCACAAATCCACGTGTACAGCGTTTATTGTTCCAAC
AGATGGCGTCTGTAGAGCACCAATCACGAACGCAGTAGGGCGGTATGTCT
ACGATTCGTGTTACCTCCGGGGGGGGGGGGTAGAGGGTAAACCTGGTGCC
GGAGGAATGGAGTGTGGTGGGTGTTCTTGTTGAGAATATGAGAAGATCTA
TCGAAGGCCAACGGCAATGGTTGAAGGGTGGCGCTGGTAGCTGTTAAGCT
GACCAAGGAAACACACTATACCAAAGGATATACGTGGTAGATGGTGGTTG
AAACGGCCGCTGCTTGAGGGCAAGGAAGGCTTTGAAGAAAAATGGAAAAA
TGTTCCGAAATTCAATGGCCAGAGAAGAGTGAGATGGCGGAGGTTGGGCT
CACTCGCTACGCCCAAACCTGGTGAATCCTCAACGTACTGATTACCAAAA
ATTCTCGAACTAGTTTTCCGCCGCGTTCTTACTTTTATCCCGCCGCGTTC
TTACCTTTATCCCGCCGCGTTCTTACCTTTATCCCGCCGCGTTCTTACCT
TTATCCCGCCACGTTCTTACTCTTATCCCGCCGCATTCTTACTCTTATTC
CGCCGCATTCTTACCTTTATCCCGCCGCGTCCTTACTTTTATCCCGTCGC
GTTCTTACCTTTATCCCGCCGCGTTCTTACCTTTATCGCGCCGCGTTCTT
ACCTTTATCCCGCCACGTTCTTACCTTTATCCCGCCGCGTTCTTACTTTT
ATTCCGCCGCATTCTTATTTTTATCCCGCCGCGTTCTTACCTTTATTCCG
CCGCATTATTATTTTTTATCCCGCCGCGTGTTTCTGGAACATAACGTACG
AGAACAGTCTATTCTTGTGTCCAAGAGCAATGCGCGATGTATTGACTAGA
TAGGCAGTGCGTGTCTATATTTTTTAACACCCAGCTAACGTCTGATAGGA
TCAGAATGGCATGTTGAAGTTGAAGGTTTCACGCAAGCATCGTCTAACAG
GCTTACTGTTTTTGGGCTCACCTGAAGGTTTACTCTCTCACCTGGACAAA
GTCGGGGTGCGTTTTTTTGCTTGCGGTTTCATTAGCAGTGGGCACATGTA
CATACATGGGGGCTTTACTGTGTGTGTATATATATATATATATATATATA
TATATAAACCAAAGCCTATCACCGCTCAGCCACAACAGTATATCTGTGTG
TAGGGCTGTTTGCCTCTCGAAACTTTGTATATCTTGGCCGCGGATCTGGG
TGATGAGTGATTGGACTAATGTGTCGGTAACAAGGAAGAAAAGGCTGAAT
GTGGTGAGGCATTTGCAGTGCGATTTGATCGTCTTCGACGTGATCTAGAC
AGTGTTTCTTCGCCACGAGCACCAGTCAAAGATGCGGAATATATAAACAG
GATGTCCTTATACCTGCGGCGGGAAAGGAAGAAAATGAAAGACAAAAAAA
AAAAAAGGGGGCGGGGAAATGTGTACGTATATGTTTATGTATATGTATAT
AAATATAAATATAAATATATAGATGAGAGGAAAATCAGAGGAAAAAAATA
TATTATATATATATATATATACATATGTATAAGAGAAAGAAAAGAAAACA
CAGAAATAAGCAAGTGTAAAAAAAAAAAAAAAAATGGAGTGAGTGTAGTA
TGTGTGTGTGTGTGTGTGTGTATGTGTGTATGTGTGTATGTGTGTATGTG
TGTATGTGTGTATGTGTGTGTGTGGTGTGTGTGTGTGTGTTTGTTTGTGT
TTAGTTTTGTCGTTCTGATCATCAATAGTATTTTCTCTGCGACACACATA
CTACTTACAGGTGTGTTCCACAGCGGAAACTATGGCCCACCTGTAGGATT
CTGCTTCGATCAAGCCTGCCAAGATGAGCCCATGATGGGTGACCCGCTCA
TGGCAGACGAGAACGTTGAAAGGAGGGCGGGGGATTTCGCTGACGCCTGC
CAGGTAACATTCTCTGCTGCTTATCGTTGTCGTCGTGATTCCGGAACATA
TTTCCAATTCTGTATTCAAGTAACTTCTGAAGGAAGAATTTTATGTAAGT
GGAAGGAGACGTTCTGGGTAGGGCCGAAGACAAAGCACGGACTGCGTGGG
TTGGTATAGCCTAGCCTAAGCCCAGCCTACTTTAGCTGTGATTCTGTTAG
GGGTAATGCTGATATTTAATCTGGTATTTTGCGCACGCGTGTGTGGTTGC
TAAATACAATTTCATCTCCCGGACAACTATACCTGTTTTCTACAATTTAA
ATATTTAAAACAAAGAGGCGCCTGAGTTTGGCACGTGTGAGCATTGAATC
TTCAAGTTTGTATGGTTCTATCCACTCTCACTCTCTCTCATATATATTAT
TATATGTGGCGTTTTTTTACGACGCAAATTTTGTGCTATTTCTAAATGCT
GCATAGTACCCTAAATACAATTTAGTATATTCAACTCCGGTGATGAAGTG
CACCCCTGGATCCTTGCTGCAGGAGCTAGGACAGCACACTCGAGGAGACC
ATGTCATGCTCCAGATGGGCGGGGATTTCGGCTTCGAGAACGCCAACGCA
TGGTACAAAAACCTCGACATGCTCATCGAGGCGGTGAACCGGGAGGGCCG
AGTAAACGTGAGTGTAAGATGGGCTCGCTGCCCTGTCTCTCCCCTTGAGG
TAGTCTGACAGATTAGGACGCGAAGCGTTGGAATCGTCGTGTGCAGCGAG
GAGCACCCCGCCCCCCCTCCCATCCGAGGTGATACGTGTAATATACGTCT
CAAACCACTGGATGTAGTTCCATTTGTAACAATATCTTTATACTTGGTTT
TTGTCATGCTCCCCGCTGAACAATCGCAAAATATATAACATGTAAAATTC
TTGACTGTACGTCCCATGTAACTGCCGTATTAAAAGAAATCAAAGGGAAA
ATATCTTGTTTTTTTTTATTATTGTTTTTCGTTATATATTTTTTTTGCCT
TTTTTGAAACAATTTTTCGAGGGGTATGTTTCTGTTTTTTTTTTTTTAAT
CTCTTCTGTTTACTATATATATATATATATATATATTTTAATTATCATTA
TGTATATGTAATAATTTTCAAGATACGGTGTCTTCTTGACACTGTTACAA
GACGTTTTATCCAGCTCCTCCACCCTGCCCAGTTAAAACGTATAAGTTAA
ATAGCTTGCGATAATTACTTAATACTGCGCGAGTTCATGTGTTGACTGTT
GCGATTTTTTTTCTTTATTTTTCCCCTATTTTCAACATATATATATATAG
GTATTTTACTCCACTCCAGAACAGTACACGAAGTCCAAGCACGCATCCGG
ATTAGAGTGGAGCGTCAAGAAGGATGACTTCTTCCCCTACGCTGATTGCC
CGGTAAGGCTCTTTTTTTTATCTTTTTTTTTATTTTAGCGGTTTACTCGC
CCTGCGACCGCGGGACGTTACGGTAAATGGTGGGTACGTGTGAGATCCAT
CGATAGTGAATTCATTTCTTTCAGGCCATTCGGATATGCATTACTCGAAG
GGTAAGACCCCTAAAAGGACGAATTTCATAATTGTATTTTGATTTCGTAA
ATATCAATAGCATGTACAGTACTTGAAGGTTTACTGGCAATTTTTCTGAC
CGAGGTGTTAACTGGATGGTGTTCGTGTTGTGTTGTTTACTTGGACATAT
TTTCAATTTTTTCTTGCGATGCGACGGGATGGATGAGACTCTGCTCCGGG
CTCCCGAAGAGAAGTTCAGAACGAGACAGGACGGGGCCATGTGCTATCCT
AAAAATATAAGTTGAATGGCGGGACCGGAAGACGATGCTCTCCCTTCCCA
TGAGGGTTCTCTGGCCCCGTGACAGATGGCCCCATTTTTTTTTTTCCCAT
GTTTTTTTTTTTTTTTCGTTTCTGGATTCTTTTCGAACCAAAAATTCCCT
TGGCTATCGCACGGGCGTGCGAATAATTTTTAAACGCAAGTTCTAAGTAT
CTTGACAAGGGCTGAAAACCTTAAAACCTTGCTTACGCCGTCGAAACATA
GTCTCGTCCACCAATAGATCTCCTATATATATATATATGTTATTTTATTT
TATTTTATTTTATGTCCAACAATAGTACGTCTTTCCTGTCAATTTTTGTT
TCTGGTGCCTTATGAGCACAGCACATGTCGAGATAAAATCGCGCTTGAAA
AACGTGCACACCCTGGTGCGAAACAGGCGGTTTACGGAAGAACAGCGAGT
TGGTTATACCGCACCACCCCTGGAATTACGCATTAGCGAAATGTTTGCGC
AAAATGAATAATTTTTACAAATTTTGATATGGTCGTTATAGACCCCCTCT
GGACCACAGCTGAACGGCACCAACGTCTCGTTACGAAAATAGTGAATTCT
CAAAATTTCGTAGATTCGATGCAAAATACGAAGATTCAAGATTCAGTCAT
TGGTTGTGACGATAAGGAGTTAGTTTTGTAACGAGGCGTTGGTGTAGGTG
GACTGGTGCCCGAAACGAGAAGCTAGCTTACTGTACCGCATCGTCTTTTT
TGCGAAAGGAGTTCATTTTGCGTAAATTCTCAGAACCCAGTATCCCCCAG
GAGCTCTTGGCTTCTGGCTGGCAGTAGAATTTATGTATACATTTATATAT
TTATAAATATTTACATGAGACCTAACAAGTACCGCGAACATTATAGGTTA
AAGTCTGGCTCGTGCAGCGTTGCAAAGTAGGTTCGCAGTGTTGCTTTCAG
CCAGTCATTGGGATCTTGATCACTTCGTGTGCGTTTTACTTGTTCTGGCT
TTACTGGCATTGTAAGACGTACGTAGATCTGACTTGACTTGACTTGCAGG
TTGTTTAGGGATCTGTTTGAGTCCTTTTTGAGTCAATAGTTGATGTCCGT
ACGGTGTGACATTGTCAGTGCTTCAGTATATTTGACCGAAGTATGTAGTA
CAGTATGCTCAACCTGCTATCGAATTTTATGTGTATGTGTATATATATAT
ATATTGCGATTCATCTTGAAGAAATGGTTGATTCTGTATTTTCGTGGATT
TACTGTGGTGTACTACAACAGGCCTTTTAAACTCCTCAGCAGGACGACGC
AATTTGGTCGTTTACCTACGCCACGGAGCGGCGTAAGATAGCGTTTGTAC
AATTTCAGGCTGTGTATTTTATTACGAAACGACGCACGAGATAATGAATG
TATTTTTGTCGTGACAGCGAACATCCCTGTGACCAATCCGCGAGAGTCTT
TGTTTTCAGCTCTGAGGGATTACAGCTTTTTCCGGAGCAACCACAGTTTT
TTTTGTTTTTTTTTCCGATGATCGATGAAGCTTCTCCTGAGCACGTGTTT
GTCGGGGTGTTTTTTTGTTTTTTCTGATGATCAATATAGTAGAGCGGCTG
CTCGTGAAATAAACAATTGTTTTGTTGTCTCTAGATTATTTTTTTTTTCT
GGACCGATGGTACCGACGTGAGACTGCTCTTGGACCTGCTTGTCCATATT
TTATTTTTTTGCGTCCGATGATGATGATTATGATGATGATGATGATGATG
ATGATGATGATGATGATGATGATCGATTATGATGATCGATTATGATGATC
GATTATGATGATCAATTATGATGATCGATGATGATGATGATGATCGATGA
TGATGACGACCAATGATGATCGATGACTATCGCACCGACAGCATTGCTAC
TGGACGGGATACTTTACCAGCCGCCCGGGGCTGAAACGGCTGGAGCGCGT
GACGAGCGCGTACTTGCAGGCTGCGCGGCAACTTCACGCTTTCACGGCGG
CA
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Coding sequence (CDS) from alignment at H-paniculata_contig7853:2600..10151+

>mRNA_H-paniculata_contig7853.15880.1 ID=mRNA_H-paniculata_contig7853.15880.1|Name=mRNA_H-paniculata_contig7853.15880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1344bp|location=Sequence derived from alignment at H-paniculata_contig7853:2600..10151+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCGGGTTCGAGGCGCTCTACTTCGGCCGCATCGACTACCAAGACCGGGA
GAAGCGTATAGCCGAGAGCGACATGGAGATGGTTTGGAGAGCGAGCCGCT
CTCTCGAGGAGAAGGCTCAGATTTTCACCGGCCGGGTTCGAGGCGCTCTA
CTTCGGCCGCATCGACTACCAAGACCGGGAGAAGCGTATAGCCGAGAGCG
ACATGGAGATGGTTTGGAGAGCGAGCCGCTCTCTCGAGGAGAAGGCTCAG
ATTTTCACCGGTGTGTTCCACAGCGGAAACTATGGCCCACCTGTAGGATT
CTGCTTCGATCAAGCCTGCCAAGATGAGCCCATGATGGGTGACCCGCTCA
TGGCAGACGAGAACGTTGAAAGGAGGGCGGGGGATTTCGCTGACGCCTGC
CAGGTGTGTTCCACAGCGGAAACTATGGCCCACCTGTAGGATTCTGCTTC
GATCAAGCCTGCCAAGATGAGCCCATGATGGGTGACCCGCTCATGGCAGA
CGAGAACGTTGAAAGGAGGGCGGGGGATTTCGCTGACGCCTGCCAGGAGC
TAGGACAGCACACTCGAGGAGACCATGTCATGCTCCAGATGGGCGGGGAT
TTCGGCTTCGAGAACGCCAACGCATGGTACAAAAACCTCGACATGCTCAT
CGAGGCGGTGAACCGGGAGGGCCGAGTAAACGAGCTAGGACAGCACACTC
GAGGAGACCATGTCATGCTCCAGATGGGCGGGGATTTCGGCTTCGAGAAC
GCCAACGCATGGTACAAAAACCTCGACATGCTCATCGAGGCGGTGAACCG
GGAGGGCCGAGTAAACGTATTTTACTCCACTCCAGAACAGTACACGAAGT
CCAAGCACGCATCCGGATTAGAGTGGAGCGTCAAGAAGGATGACTTCTTC
CCCTACGCTGATTGCCCGGTATTTTACTCCACTCCAGAACAGTACACGAA
GTCCAAGCACGCATCCGGATTAGAGTGGAGCGTCAAGAAGGATGACTTCT
TCCCCTACGCTGATTGCCCGCACAGCACATGTCGAGATAAAATCGCGCTT
GAAAAACCACAGCACATGTCGAGATAAAATCGCGCTTGAAAAACCTTCTC
CTGAGCACCTTCTCCTGAGCACCATTGCTACTGGACGGGATACTTTACCA
GCCGCCCGGGGCTGAAACGGCTGGAGCGCGTGACGAGCGCGTACTTGCAG
GCTGCGCGGCAACTTCACGCTTTCACGGCGGCACATTGCTACTGGACGGG
ATACTTTACCAGCCGCCCGGGGCTGAAACGGCTGGAGCGCGTGACGAGCG
CGTACTTGCAGGCTGCGCGGCAACTTCACGCTTTCACGGCGGCA
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